AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0484590


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0484590 MtrunA17_Chr2g0313871 99.050 421 2 1 1 419 1 421 0.0 853
Msa0484590 MtrunA17_Chr4g0053631 36.292 383 222 6 39 399 9 391 1.24e-76 244
Msa0484590 MtrunA17_Chr8g0373601 37.349 249 136 7 111 346 92 333 3.23e-35 133
Msa0484590 MtrunA17_Chr5g0403581 37.008 254 142 6 111 352 91 338 9.89e-35 132
Msa0484590 MtrunA17_Chr8g0375771 24.444 270 168 9 69 328 145 388 1.52e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0484590 AT1G17050.1 66.905 420 132 3 2 418 1 416 0.0 548
Msa0484590 AT1G78510.1 67.064 419 122 3 2 418 1 405 0.0 544
Msa0484590 AT1G78510.2 78.743 334 71 0 85 418 33 366 0.0 540
Msa0484590 AT2G34630.2 39.809 314 176 3 101 401 85 398 1.65e-72 234
Msa0484590 AT2G34630.1 40.067 297 165 3 118 401 1 297 4.34e-69 221
Msa0484590 AT4G36810.1 41.176 255 126 9 109 346 85 332 3.96e-38 142
Msa0484590 AT2G18620.1 40.152 264 137 9 111 360 66 322 3.74e-36 136
Msa0484590 AT2G18640.1 38.000 250 137 7 109 346 90 333 2.40e-34 131
Msa0484590 AT3G14510.1 39.331 239 125 6 136 360 27 259 2.81e-33 126
Msa0484590 AT3G20160.1 35.827 254 140 8 109 346 59 305 1.39e-31 123
Msa0484590 AT3G32040.1 35.955 267 150 7 109 360 75 335 3.67e-29 117
Msa0484590 AT2G23800.1 35.857 251 141 9 109 346 94 337 1.83e-28 115
Msa0484590 AT3G29430.1 35.955 267 150 7 109 360 72 332 1.06e-27 113
Msa0484590 AT3G14550.3 35.955 267 150 8 109 360 75 335 1.80e-27 112
Msa0484590 AT3G14550.1 35.955 267 150 8 109 360 75 335 1.80e-27 112
Msa0484590 AT3G14550.2 35.955 267 150 8 109 360 75 335 1.80e-27 112
Msa0484590 AT3G14530.1 36.330 267 149 8 109 360 75 335 5.35e-27 111
Msa0484590 AT3G20160.2 33.603 247 127 8 109 346 59 277 1.17e-26 109
Msa0484590 AT1G49530.1 32.444 225 130 6 137 345 78 296 1.61e-22 98.2

Find 103 sgRNAs with CRISPR-Local

Find 251 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAACCTATTTGGTGAAAT+AGG 0.152420 3_4:-2005406 None:intergenic
CTCAATGATATCCCTCAATT+TGG 0.156996 3_4:-2007514 None:intergenic
TCAATATCGTGTTTCTTCTA+TGG 0.220495 3_4:+2004117 Msa0484590:CDS
ACTACTTCAAACAACCTATT+TGG 0.233446 3_4:-2005415 None:intergenic
ACAACCTATTTGGTGAAATA+GGG 0.248193 3_4:-2005405 None:intergenic
GAGACCGGCTCTTGTGTTCT+TGG 0.257479 3_4:+2006012 Msa0484590:CDS
TTCTCCAACGCGAAAATTAC+AGG 0.258160 3_4:-2007486 None:intergenic
CCAGATCCAAGAAAATAAAA+TGG 0.265102 3_4:-2007950 None:intergenic
TTGATCGCTGCCAGTGTAAA+AGG 0.286753 3_4:+2007291 Msa0484590:CDS
GGCTAAACGTCGATGCTTTA+CGG 0.286782 3_4:-2006210 None:intergenic
TCACTAGCTTACCTCTTCTT+AGG 0.317476 3_4:-2006295 None:intergenic
TGGAAATGGAGCTCGTAAAT+TGG 0.324226 3_4:+2004069 Msa0484590:CDS
GAAACTGTTCATCAAATGTT+TGG 0.338601 3_4:+2006759 Msa0484590:CDS
CCAAGTTGTCGACGACATAT+TGG 0.347498 3_4:+2007392 Msa0484590:CDS
TAAGATCATAAATACAATAA+TGG 0.369450 3_4:-2007902 None:intergenic
CAACCCCTATTTCACCAAAT+AGG 0.381053 3_4:+2005401 Msa0484590:CDS
TTTGGTGAAATAGGGGTTGC+TGG 0.395241 3_4:-2005397 None:intergenic
CAGATCCAAGAAAATAAAAT+GGG 0.409484 3_4:-2007949 None:intergenic
CTTCACACTTCTTCCTCCAA+TGG 0.410431 3_4:+2003836 Msa0484590:five_prime_UTR
CTCTTGTGTTCTTGGTGTCA+AGG 0.413478 3_4:+2006020 Msa0484590:CDS
GAAGAAGAAGCAAGTTAAGA+AGG 0.413485 3_4:-2003875 None:intergenic
TCAATGATATCCCTCAATTT+GGG 0.416555 3_4:-2007513 None:intergenic
TTGGCGAGGTCCGTGCCTGC+AGG 0.424775 3_4:-2007447 None:intergenic
CCAATATGTCGTCGACAACT+TGG 0.427937 3_4:-2007392 None:intergenic
AATTCTAAAGGGTGTGGAAA+TGG 0.428535 3_4:+2004055 Msa0484590:CDS
GAGTCTGAATTTAGCGAGAT+TGG 0.432083 3_4:+2007534 Msa0484590:CDS
GAAGGTGTTGATGGATTTGT+TGG 0.433548 3_4:-2007807 None:intergenic
AGGAGCGGTGAGGTTACCTT+TGG 0.445911 3_4:-2007466 None:intergenic
ACTGAGAAAATGTTCGAATA+CGG 0.446574 3_4:+2007348 Msa0484590:CDS
GCAATTAAAGACCTTGCAAA+AGG 0.452757 3_4:+2005355 Msa0484590:CDS
TCAGCTGCAGATATTAAAAC+TGG 0.453325 3_4:-2005959 None:intergenic
TATGCTAAGGTGAATTCTAA+AGG 0.455161 3_4:+2004043 Msa0484590:CDS
ATCAAGTTGGTTAAGAGTTG+TGG 0.459670 3_4:+2007573 Msa0484590:CDS
TTTCTTGTACGCTTACTACT+AGG 0.468801 3_4:+2008031 Msa0484590:intron
TGGAGGAAGAAGTGTGAAGA+AGG 0.476525 3_4:-2003832 None:intergenic
TCAAGTTGGTTAAGAGTTGT+GGG 0.479565 3_4:+2007574 Msa0484590:CDS
TCTTGTGTTCTTGGTGTCAA+GGG 0.480305 3_4:+2006021 Msa0484590:CDS
AAGAAGAAGCAAGTTAAGAA+GGG 0.484061 3_4:-2003874 None:intergenic
GGAGGAAGAAGTGTGAAGAA+GGG 0.487742 3_4:-2003831 None:intergenic
ACAAGAGTGGCAGTGCTGGC+TGG 0.494391 3_4:+2006783 Msa0484590:CDS
ACAAAGGGAGAAGGTGTTGA+TGG 0.496486 3_4:-2007816 None:intergenic
TTTCTTGGATCTGGTTGTAA+GGG 0.496646 3_4:+2007959 Msa0484590:three_prime_UTR
ACGCAATCGGCAGAGCAACT+TGG 0.497280 3_4:+2007420 Msa0484590:CDS
TTCGAATACGGGAAGAATCT+CGG 0.498347 3_4:+2007360 Msa0484590:CDS
ATGAATCATTTCAACTATCT+CGG 0.499817 3_4:-2006231 None:intergenic
ATGCTAAGGTGAATTCTAAA+GGG 0.500417 3_4:+2004044 Msa0484590:CDS
TGGAACAAGAGTGGCAGTGC+TGG 0.503897 3_4:+2006779 Msa0484590:CDS
ATTGAGTGTTTGAAGATCAT+CGG 0.505570 3_4:-2005440 None:intergenic
ATACCTATGAAAAGAAGCAT+TGG 0.506870 3_4:-2004008 None:intergenic
ACTTGGAAAGCCTGCAGGCA+CGG 0.508298 3_4:+2007437 Msa0484590:CDS
CTGAGAAAATGTTCGAATAC+GGG 0.508576 3_4:+2007349 Msa0484590:CDS
AATTGGTTTGTTGTAAGAAG+AGG 0.509786 3_4:+2004086 Msa0484590:CDS
CATATTGGATTTCACGCAAT+CGG 0.510526 3_4:+2007407 Msa0484590:CDS
TCTTTAGTGCTGGTGGGAAG+AGG 0.511599 3_4:+2005987 Msa0484590:CDS
ACTGCAGAGCCTACTTTGAA+TGG 0.516676 3_4:+2004142 Msa0484590:CDS
TGGAGAAAGAACCCAAATTG+AGG 0.518973 3_4:+2007502 Msa0484590:CDS
GAGCAACTTGGAAAGCCTGC+AGG 0.520485 3_4:+2007432 Msa0484590:CDS
TCATGTTTGCACAATCATCA+TGG 0.521316 3_4:+2006811 Msa0484590:CDS
GCTAAACGATACACACTTGG+AGG 0.522408 3_4:-2007666 None:intergenic
GAGGAAGAAGTGTGAAGAAG+GGG 0.525932 3_4:-2003830 None:intergenic
GGATGCTCTTGATAGATTGT+AGG 0.526067 3_4:+2005926 Msa0484590:intron
GGAGAAAGAACCCAAATTGA+GGG 0.527032 3_4:+2007503 Msa0484590:CDS
AGTCATTAAACTTATCAGCC+AGG 0.539916 3_4:+2006860 Msa0484590:CDS
CAACCTATTTGGTGAAATAG+GGG 0.541722 3_4:-2005404 None:intergenic
AAGGTGAATTCTAAAGGGTG+TGG 0.545230 3_4:+2004049 Msa0484590:CDS
AAGAAGCAAGTTAAGAAGGG+GGG 0.550631 3_4:-2003871 None:intergenic
GGGGTTTAAATAGCAACCAT+TGG 0.550716 3_4:-2003852 None:intergenic
TACCAGTGTATAGACATTGA+AGG 0.556359 3_4:+2007853 Msa0484590:three_prime_UTR
GCTGAGCAGATCTTTAGTGC+TGG 0.564731 3_4:+2005977 Msa0484590:CDS
GACACCAAGAACACAAGAGC+CGG 0.565484 3_4:-2006016 None:intergenic
AGGGCGACCGCAGAGCTACA+TGG 0.569025 3_4:+2006040 Msa0484590:CDS
GAGCAGATCTTTAGTGCTGG+TGG 0.569958 3_4:+2005980 Msa0484590:CDS
TCGTTTAGCTCTTGAGGACA+TGG 0.571941 3_4:+2007680 Msa0484590:CDS
AGCAGATCTTTAGTGCTGGT+GGG 0.574274 3_4:+2005981 Msa0484590:CDS
GTTTAAATAGCAACCATTGG+AGG 0.574285 3_4:-2003849 None:intergenic
GATGAGAGTGACCTAAGAAG+AGG 0.576816 3_4:+2006284 Msa0484590:CDS
GAAGAAGCAAGTTAAGAAGG+GGG 0.578626 3_4:-2003872 None:intergenic
AAAAGTAGCACAAAGGGAGA+AGG 0.579675 3_4:-2007825 None:intergenic
TGGTGACATATAATCTTCAA+AGG 0.582035 3_4:+2007700 Msa0484590:CDS
AATCGAAAGAGCACAAGAGT+TGG 0.582560 3_4:+2007599 Msa0484590:CDS
GCAGGCACGGACCTCGCCAA+AGG 0.584554 3_4:+2007450 Msa0484590:CDS
TGTGTATCGTTTAGCTCTTG+AGG 0.586196 3_4:+2007674 Msa0484590:CDS
TGAAGTCAAGAATTATGCTA+AGG 0.586221 3_4:+2004030 Msa0484590:CDS
GACAATTCACAAAACCCAGA+TGG 0.586658 3_4:-2003903 None:intergenic
TATGGAAAATGGAAGAAGAG+AGG 0.587233 3_4:-2003803 None:intergenic
AAGTTGGTTAAGAGTTGTGG+GGG 0.591345 3_4:+2007576 Msa0484590:CDS
AGGAAGAAGTGTGAAGAAGG+GGG 0.593286 3_4:-2003829 None:intergenic
CGGTGAGGTTACCTTTGGCG+AGG 0.597280 3_4:-2007461 None:intergenic
TATGTCGTCGACAACTTGGA+AGG 0.598026 3_4:-2007388 None:intergenic
AGAAGAAGCAAGTTAAGAAG+GGG 0.599136 3_4:-2003873 None:intergenic
TCAAATGTTTGGAACAAGAG+TGG 0.606800 3_4:+2006770 Msa0484590:CDS
ATCCTTCAATGTCTATACAC+TGG 0.610603 3_4:-2007855 None:intergenic
TGGTGGGAAGAGGATGAGAC+CGG 0.611153 3_4:+2005997 Msa0484590:CDS
ATCACTGTACCATTCAAAGT+AGG 0.612430 3_4:-2004151 None:intergenic
TCTTGACGAAGCGATCAAGT+TGG 0.618929 3_4:+2007560 Msa0484590:CDS
AGAGCTAAACGATACACACT+TGG 0.629738 3_4:-2007669 None:intergenic
CAAGTTGGTTAAGAGTTGTG+GGG 0.643343 3_4:+2007575 Msa0484590:CDS
AGTGGAACAAGTTAAGTGAG+TGG 0.645911 3_4:-2003732 None:intergenic
CGAAAATTACAGGAGCGGTG+AGG 0.666110 3_4:-2007476 None:intergenic
CTCAAGGCCATGTAGCTCTG+CGG 0.684430 3_4:-2006047 None:intergenic
CAACGCGAAAATTACAGGAG+CGG 0.691950 3_4:-2007481 None:intergenic
AGATCCAAGAAAATAAAATG+GGG 0.695397 3_4:-2007948 None:intergenic
TACACTGGCAGCGATCAAGG+AGG 0.706136 3_4:-2007286 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTCTTTCAAATTATTAT+CGG + chr3_4:2005193-2005212 Msa0484590:intron 10.0%
!! TAATGAAAAAATCATTATTT+CGG + chr3_4:2007073-2007092 Msa0484590:intron 10.0%
!! TAAGATCATAAATACAATAA+TGG - chr3_4:2007905-2007924 None:intergenic 15.0%
!!! AAAAAAAGGGTTCTTTTTAT+GGG - chr3_4:2003774-2003793 None:intergenic 20.0%
!!! TGATTTTTTTGGTAAAAACT+TGG + chr3_4:2003967-2003986 Msa0484590:CDS 20.0%
!!! TTTTTGTTTATAATAGTGAC+TGG - chr3_4:2004465-2004484 None:intergenic 20.0%
!! TAAACAAAAATCAACTTTCT+AGG + chr3_4:2004475-2004494 Msa0484590:intron 20.0%
!! CACTTATTAAATGATGTATT+TGG - chr3_4:2004532-2004551 None:intergenic 20.0%
!!! TAAGCAAAAATCAACTTTTT+AGG - chr3_4:2004557-2004576 None:intergenic 20.0%
!!! GTCATATAAATAGAATTTTC+AGG - chr3_4:2006140-2006159 None:intergenic 20.0%
!!! GTATGAGAAAAATTGATTTA+GGG - chr3_4:2006397-2006416 None:intergenic 20.0%
!!! AGTATGAGAAAAATTGATTT+AGG - chr3_4:2006398-2006417 None:intergenic 20.0%
!!! TCAATTTTTCTCATACTTTA+CGG + chr3_4:2006401-2006420 Msa0484590:intron 20.0%
!! TGGTATATACATTCATAAAA+AGG + chr3_4:2006611-2006630 Msa0484590:intron 20.0%
!!! TAACTTGCTTTGAATTAATA+GGG + chr3_4:2006733-2006752 Msa0484590:intron 20.0%
!! AATATGAAAGAACTTATGTT+AGG + chr3_4:2006973-2006992 Msa0484590:intron 20.0%
!! AGTAATTGATATCCATTTAA+GGG - chr3_4:2007009-2007028 None:intergenic 20.0%
!! AAGTAATTGATATCCATTTA+AGG - chr3_4:2007010-2007029 None:intergenic 20.0%
!!! TTCTATTTTTGCAAAACTTT+TGG + chr3_4:2007150-2007169 Msa0484590:intron 20.0%
!! GAAAAAAAGGGTTCTTTTTA+TGG - chr3_4:2003775-2003794 None:intergenic 25.0%
!!! AGCAAAAGCATTGATTTTTT+TGG + chr3_4:2003956-2003975 Msa0484590:CDS 25.0%
!! TAATAATTTGAAGTGTGTTG+TGG + chr3_4:2004191-2004210 Msa0484590:intron 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG + chr3_4:2004567-2004586 Msa0484590:intron 25.0%
! TCTGACAATTCTAATATTGT+CGG - chr3_4:2004784-2004803 None:intergenic 25.0%
! TCTGACAATTCTAATATTGT+CGG - chr3_4:2004784-2004803 None:intergenic 25.0%
!! TTCATTTTGTATGTACTATG+TGG + chr3_4:2004355-2004374 Msa0484590:intron 25.0%
! AATTGAATGTTACATGTGTT+TGG - chr3_4:2005164-2005183 None:intergenic 25.0%
! AACTTTGGCATTAAAAGATT+TGG + chr3_4:2005311-2005330 Msa0484590:intron 25.0%
!!! ATTTGGTTTGGTTTTTGAAT+AGG + chr3_4:2005328-2005347 Msa0484590:intron 25.0%
!! GTTTAAAATCACTGAAGAAT+GGG - chr3_4:2005620-2005639 None:intergenic 25.0%
!! TGTTTAAAATCACTGAAGAA+TGG - chr3_4:2005621-2005640 None:intergenic 25.0%
!! ATTCTTCAGTGATTTTAAAC+AGG + chr3_4:2005620-2005639 Msa0484590:intron 25.0%
! CATCAGTTAAACTAACATAT+AGG - chr3_4:2005905-2005924 None:intergenic 25.0%
!! ATATGTTAGTTTAACTGATG+AGG + chr3_4:2005905-2005924 Msa0484590:intron 25.0%
! ATGAATCATTTCAACTATCT+CGG - chr3_4:2006234-2006253 None:intergenic 25.0%
! AAGCTAGTGATATTTAGAAA+TGG + chr3_4:2006308-2006327 Msa0484590:intron 25.0%
! CCAAATTAAAACAAAGTTTC+AGG - chr3_4:2006499-2006518 None:intergenic 25.0%
!!! CCTGAAACTTTGTTTTAATT+TGG + chr3_4:2006496-2006515 Msa0484590:intron 25.0%
! ATGTATATACCAATTTGTCA+AGG - chr3_4:2006603-2006622 None:intergenic 25.0%
! TAGATGGAAAAGAAAAAACA+AGG - chr3_4:2006668-2006687 None:intergenic 25.0%
!!! CTAACTTGCTTTGAATTAAT+AGG + chr3_4:2006732-2006751 Msa0484590:intron 25.0%
!! TAATGACTTCAATGTTTTCA+AGG - chr3_4:2006848-2006867 None:intergenic 25.0%
! ATAAGTTCTTTCATATTCAC+CGG - chr3_4:2006970-2006989 None:intergenic 25.0%
! GTAATTGATATCCATTTAAG+GGG - chr3_4:2007008-2007027 None:intergenic 25.0%
! AATGGATATCAATTACTTCA+AGG + chr3_4:2007012-2007031 Msa0484590:intron 25.0%
! ATGGATATCAATTACTTCAA+GGG + chr3_4:2007013-2007032 Msa0484590:intron 25.0%
! TAGAAACAGTGTTTAGAAAA+TGG - chr3_4:2007135-2007154 None:intergenic 25.0%
!!! TTTTCCCCATTTTATTTTCT+TGG + chr3_4:2007944-2007963 Msa0484590:three_prime_UTR 25.0%
! AGATCCAAGAAAATAAAATG+GGG - chr3_4:2007951-2007970 None:intergenic 25.0%
! CAGATCCAAGAAAATAAAAT+GGG - chr3_4:2007952-2007971 None:intergenic 25.0%
AAGAAGAAGCAAGTTAAGAA+GGG - chr3_4:2003877-2003896 None:intergenic 30.0%
! TTCTTCTTCATTTTCCATCT+GGG + chr3_4:2003889-2003908 Msa0484590:five_prime_UTR 30.0%
! ATACCTATGAAAAGAAGCAT+TGG - chr3_4:2004011-2004030 None:intergenic 30.0%
TGAAGTCAAGAATTATGCTA+AGG + chr3_4:2004030-2004049 Msa0484590:CDS 30.0%
TATGCTAAGGTGAATTCTAA+AGG + chr3_4:2004043-2004062 Msa0484590:CDS 30.0%
ATGCTAAGGTGAATTCTAAA+GGG + chr3_4:2004044-2004063 Msa0484590:CDS 30.0%
!! AATTGGTTTGTTGTAAGAAG+AGG + chr3_4:2004086-2004105 Msa0484590:CDS 30.0%
TCAATATCGTGTTTCTTCTA+TGG + chr3_4:2004117-2004136 Msa0484590:CDS 30.0%
! TATCTTATTGAAAGTGTGTC+TGG + chr3_4:2004269-2004288 Msa0484590:intron 30.0%
TCAGATAATTCTGATACTGA+CGG - chr3_4:2004298-2004317 None:intergenic 30.0%
GTATCAGAATTATCTGATAC+TGG + chr3_4:2004301-2004320 Msa0484590:intron 30.0%
TGTTTATAATAGTGACTGGA+GGG - chr3_4:2004461-2004480 None:intergenic 30.0%
TTGTTTATAATAGTGACTGG+AGG - chr3_4:2004462-2004481 None:intergenic 30.0%
GATTGAATGTTACATATGTC+TGG - chr3_4:2004819-2004838 None:intergenic 30.0%
GATTGAATGTTACATATGTC+TGG - chr3_4:2004819-2004838 None:intergenic 30.0%
! TTCATTTTGTACGTACTATG+TGG + chr3_4:2004958-2004977 Msa0484590:intron 30.0%
ACAATATCTGTCAATTCTGT+TGG - chr3_4:2005135-2005154 None:intergenic 30.0%
CTTTCAAATTATTATCGGTC+TGG + chr3_4:2005198-2005217 Msa0484590:intron 30.0%
!!! GTTCGTATTGATTTTAGAAG+TGG + chr3_4:2005288-2005307 Msa0484590:intron 30.0%
!! TGATTTTAGAAGTGGAACTT+TGG + chr3_4:2005296-2005315 Msa0484590:intron 30.0%
! TGGCATTAAAAGATTTGGTT+TGG + chr3_4:2005316-2005335 Msa0484590:intron 30.0%
! ACAACCTATTTGGTGAAATA+GGG - chr3_4:2005408-2005427 None:intergenic 30.0%
! AACAACCTATTTGGTGAAAT+AGG - chr3_4:2005409-2005428 None:intergenic 30.0%
ACTACTTCAAACAACCTATT+TGG - chr3_4:2005418-2005437 None:intergenic 30.0%
ATTGAGTGTTTGAAGATCAT+CGG - chr3_4:2005443-2005462 None:intergenic 30.0%
GACACAATTATAAGCAACTA+AGG - chr3_4:2005530-2005549 None:intergenic 30.0%
AAAGAAATACTCAAACAGAC+AGG - chr3_4:2005557-2005576 None:intergenic 30.0%
TGTGATATACAGTTTAGTAC+AGG - chr3_4:2005738-2005757 None:intergenic 30.0%
TTTCAAATTCTGCTATGCTA+TGG + chr3_4:2005773-2005792 Msa0484590:intron 30.0%
ATCTTGAAATGAATGATTGC+AGG + chr3_4:2006180-2006199 Msa0484590:intron 30.0%
TCTTGAAATGAATGATTGCA+GGG + chr3_4:2006181-2006200 Msa0484590:intron 30.0%
TTTCTGCTTATGATCATGTT+TGG + chr3_4:2006360-2006379 Msa0484590:intron 30.0%
TTGTATGAGTCATTACATGT+CGG + chr3_4:2006538-2006557 Msa0484590:intron 30.0%
TATGTATCACCTTGACAAAT+TGG + chr3_4:2006591-2006610 Msa0484590:intron 30.0%
! TTGCTTTGAATTAATAGGGA+AGG + chr3_4:2006737-2006756 Msa0484590:intron 30.0%
GAAACTGTTCATCAAATGTT+TGG + chr3_4:2006759-2006778 Msa0484590:CDS 30.0%
! TTTTCAACGTTGTATGATGA+TGG - chr3_4:2006892-2006911 None:intergenic 30.0%
TAAGTTCTTTCATATTCACC+GGG - chr3_4:2006969-2006988 None:intergenic 30.0%
GAAAGAACTTATGTTAGGAT+AGG + chr3_4:2006978-2006997 Msa0484590:intron 30.0%
TATCAATTACTTCAAGGGAT+TGG + chr3_4:2007018-2007037 Msa0484590:intron 30.0%
ATCAATTACTTCAAGGGATT+GGG + chr3_4:2007019-2007038 Msa0484590:intron 30.0%
! GTGATTAAAGATTTTGCTAG+TGG + chr3_4:2007183-2007202 Msa0484590:CDS 30.0%
ACTGAGAAAATGTTCGAATA+CGG + chr3_4:2007348-2007367 Msa0484590:CDS 30.0%
TCAATGATATCCCTCAATTT+GGG - chr3_4:2007516-2007535 None:intergenic 30.0%
TGGTGACATATAATCTTCAA+AGG + chr3_4:2007700-2007719 Msa0484590:CDS 30.0%
AACTCAAAAAGTAGCACAAA+GGG - chr3_4:2007834-2007853 None:intergenic 30.0%
TAACTCAAAAAGTAGCACAA+AGG - chr3_4:2007835-2007854 None:intergenic 30.0%
CCAGATCCAAGAAAATAAAA+TGG - chr3_4:2007953-2007972 None:intergenic 30.0%
!!! CCATTTTATTTTCTTGGATC+TGG + chr3_4:2007950-2007969 Msa0484590:three_prime_UTR 30.0%
! TTTTTATGGGTCACGAGTTT+TGG - chr3_4:2003761-2003780 None:intergenic 35.0%
! GAGGAGTACACAGAAAAAAA+GGG - chr3_4:2003787-2003806 None:intergenic 35.0%
! AGAGGAGTACACAGAAAAAA+AGG - chr3_4:2003788-2003807 None:intergenic 35.0%
TATGGAAAATGGAAGAAGAG+AGG - chr3_4:2003806-2003825 None:intergenic 35.0%
GTTTAAATAGCAACCATTGG+AGG - chr3_4:2003852-2003871 None:intergenic 35.0%
AGAAGAAGCAAGTTAAGAAG+GGG - chr3_4:2003876-2003895 None:intergenic 35.0%
GAAGAAGAAGCAAGTTAAGA+AGG - chr3_4:2003878-2003897 None:intergenic 35.0%
! CTTCTTCTTCATTTTCCATC+TGG + chr3_4:2003888-2003907 Msa0484590:five_prime_UTR 35.0%
GGTAAAAACTTGGTTTCTTG+TGG + chr3_4:2003977-2003996 Msa0484590:CDS 35.0%
! CTTCCAATGCTTCTTTTCAT+AGG + chr3_4:2004005-2004024 Msa0484590:CDS 35.0%
! AATTCTAAAGGGTGTGGAAA+TGG + chr3_4:2004055-2004074 Msa0484590:CDS 35.0%
ATCACTGTACCATTCAAAGT+AGG - chr3_4:2004154-2004173 None:intergenic 35.0%
GACTGAATGAAACATGTGTA+TGG - chr3_4:2004333-2004352 None:intergenic 35.0%
GAATTGTCAGATATTGTCGA+AGG + chr3_4:2004424-2004443 Msa0484590:intron 35.0%
TGATTGAATGTTACACGTGT+TGG - chr3_4:2004704-2004723 None:intergenic 35.0%
!! TGTAGTACTGATACTTCTGA+TGG + chr3_4:2004373-2004392 Msa0484590:intron 35.0%
GAATTGTCAGATATTGTCGA+AGG + chr3_4:2004424-2004443 Msa0484590:intron 35.0%
! TTCATTTTGTACGTGCTATG+TGG + chr3_4:2004841-2004860 Msa0484590:intron 35.0%
GAATTGTCAGATATTGTCGA+AGG + chr3_4:2004424-2004443 Msa0484590:intron 35.0%
!!! TGGTTTGGTTTTTGAATAGG+TGG + chr3_4:2005331-2005350 Msa0484590:intron 35.0%
GCAATTAAAGACCTTGCAAA+AGG + chr3_4:2005355-2005374 Msa0484590:CDS 35.0%
! TCAAGTTCAATCCTTTTGCA+AGG - chr3_4:2005369-2005388 None:intergenic 35.0%
! CAACCTATTTGGTGAAATAG+GGG - chr3_4:2005407-2005426 None:intergenic 35.0%
! AGTGTAGCGGAATTCAAAAA+TGG - chr3_4:2005676-2005695 None:intergenic 35.0%
! TAGCTGCTATTTGACAATAC+TGG + chr3_4:2005801-2005820 Msa0484590:intron 35.0%
AGAAAAGCTGAAAAGCAAGA+AGG - chr3_4:2005848-2005867 None:intergenic 35.0%
TCAGCTGCAGATATTAAAAC+TGG - chr3_4:2005962-2005981 None:intergenic 35.0%
GAGATCTGTATACTTACTCA+AGG - chr3_4:2006066-2006085 None:intergenic 35.0%
! TCAAATGTTTGGAACAAGAG+TGG + chr3_4:2006770-2006789 Msa0484590:CDS 35.0%
TCATGTTTGCACAATCATCA+TGG + chr3_4:2006811-2006830 Msa0484590:CDS 35.0%
!! GACTTCAATGTTTTCAAGGT+TGG - chr3_4:2006844-2006863 None:intergenic 35.0%
AGTCATTAAACTTATCAGCC+AGG + chr3_4:2006860-2006879 Msa0484590:CDS 35.0%
CTGAGAAAATGTTCGAATAC+GGG + chr3_4:2007349-2007368 Msa0484590:CDS 35.0%
CATATTGGATTTCACGCAAT+CGG + chr3_4:2007407-2007426 Msa0484590:CDS 35.0%
CTCAATGATATCCCTCAATT+TGG - chr3_4:2007517-2007536 None:intergenic 35.0%
!! ATCAAGTTGGTTAAGAGTTG+TGG + chr3_4:2007573-2007592 Msa0484590:CDS 35.0%
!! TCAAGTTGGTTAAGAGTTGT+GGG + chr3_4:2007574-2007593 Msa0484590:CDS 35.0%
TACCAGTGTATAGACATTGA+AGG + chr3_4:2007853-2007872 Msa0484590:three_prime_UTR 35.0%
ATCCTTCAATGTCTATACAC+TGG - chr3_4:2007858-2007877 None:intergenic 35.0%
! TTTTCTTGGATCTGGTTGTA+AGG + chr3_4:2007958-2007977 Msa0484590:three_prime_UTR 35.0%
TTTCTTGGATCTGGTTGTAA+GGG + chr3_4:2007959-2007978 Msa0484590:three_prime_UTR 35.0%
TTTCTTGTACGCTTACTACT+AGG + chr3_4:2008031-2008050 Msa0484590:intron 35.0%
AGTGGAACAAGTTAAGTGAG+TGG - chr3_4:2003735-2003754 None:intergenic 40.0%
GGGGTTTAAATAGCAACCAT+TGG - chr3_4:2003855-2003874 None:intergenic 40.0%
AAGAAGCAAGTTAAGAAGGG+GGG - chr3_4:2003874-2003893 None:intergenic 40.0%
GAAGAAGCAAGTTAAGAAGG+GGG - chr3_4:2003875-2003894 None:intergenic 40.0%
GACAATTCACAAAACCCAGA+TGG - chr3_4:2003906-2003925 None:intergenic 40.0%
! AAGGTGAATTCTAAAGGGTG+TGG + chr3_4:2004049-2004068 Msa0484590:CDS 40.0%
TGGAAATGGAGCTCGTAAAT+TGG + chr3_4:2004069-2004088 Msa0484590:CDS 40.0%
AAAGTGTGTCTGGTGTCTAA+CGG + chr3_4:2004396-2004415 Msa0484590:intron 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr3_4:2004570-2004589 Msa0484590:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG + chr3_4:2004571-2004590 Msa0484590:intron 40.0%
TGAATGTTACATACTCCCTC+CGG - chr3_4:2004589-2004608 None:intergenic 40.0%
!! TGTGGTACTGATACTTCTGA+TGG + chr3_4:2004859-2004878 Msa0484590:intron 40.0%
!! TGTGGTACTGATACTTCTGA+TGG + chr3_4:2004859-2004878 Msa0484590:intron 40.0%
!! TGTGGTACTGATACTTCTGA+TGG + chr3_4:2004859-2004878 Msa0484590:intron 40.0%
CAACCCCTATTTCACCAAAT+AGG + chr3_4:2005401-2005420 Msa0484590:CDS 40.0%
AATACTCAAACAGACAGGAC+AGG - chr3_4:2005552-2005571 None:intergenic 40.0%
! GGGTATCATTCACGTTTTTC+TGG - chr3_4:2005600-2005619 None:intergenic 40.0%
ACTATAGCGCTATAGTGTAG+CGG - chr3_4:2005689-2005708 None:intergenic 40.0%
TTGTCAAATAGCCGCTATTG+CGG - chr3_4:2005713-2005732 None:intergenic 40.0%
GGATGCTCTTGATAGATTGT+AGG + chr3_4:2005926-2005945 Msa0484590:intron 40.0%
!! TCTTGTGTTCTTGGTGTCAA+GGG + chr3_4:2006021-2006040 Msa0484590:CDS 40.0%
! TCACTAGCTTACCTCTTCTT+AGG - chr3_4:2006298-2006317 None:intergenic 40.0%
TCCTTTACACCTCACACATA+TGG + chr3_4:2006473-2006492 Msa0484590:intron 40.0%
! TTCTTTTCCATCTACTCTGC+TGG + chr3_4:2006674-2006693 Msa0484590:intron 40.0%
GCAGATGCAAGTGAATGATA+AGG - chr3_4:2006918-2006937 None:intergenic 40.0%
!! CAAAACTTTTGGTGTGTGAC+AGG + chr3_4:2007161-2007180 Msa0484590:intron 40.0%
TTCGAATACGGGAAGAATCT+CGG + chr3_4:2007360-2007379 Msa0484590:CDS 40.0%
TTCTCCAACGCGAAAATTAC+AGG - chr3_4:2007489-2007508 None:intergenic 40.0%
TGGAGAAAGAACCCAAATTG+AGG + chr3_4:2007502-2007521 Msa0484590:CDS 40.0%
GGAGAAAGAACCCAAATTGA+GGG + chr3_4:2007503-2007522 Msa0484590:CDS 40.0%
GAGTCTGAATTTAGCGAGAT+TGG + chr3_4:2007534-2007553 Msa0484590:CDS 40.0%
!! CAAGTTGGTTAAGAGTTGTG+GGG + chr3_4:2007575-2007594 Msa0484590:CDS 40.0%
! AAGTTGGTTAAGAGTTGTGG+GGG + chr3_4:2007576-2007595 Msa0484590:CDS 40.0%
! AATCGAAAGAGCACAAGAGT+TGG + chr3_4:2007599-2007618 Msa0484590:CDS 40.0%
AGAGCTAAACGATACACACT+TGG - chr3_4:2007672-2007691 None:intergenic 40.0%
!! TGTGTATCGTTTAGCTCTTG+AGG + chr3_4:2007674-2007693 Msa0484590:CDS 40.0%
!! GAAGGTGTTGATGGATTTGT+TGG - chr3_4:2007810-2007829 None:intergenic 40.0%
AAAAGTAGCACAAAGGGAGA+AGG - chr3_4:2007828-2007847 None:intergenic 40.0%
!! GAAGGGGGTGTTATGGAAAA+TGG - chr3_4:2003817-2003836 None:intergenic 45.0%
! AGGAAGAAGTGTGAAGAAGG+GGG - chr3_4:2003832-2003851 None:intergenic 45.0%
! GAGGAAGAAGTGTGAAGAAG+GGG - chr3_4:2003833-2003852 None:intergenic 45.0%
! GGAGGAAGAAGTGTGAAGAA+GGG - chr3_4:2003834-2003853 None:intergenic 45.0%
! TGGAGGAAGAAGTGTGAAGA+AGG - chr3_4:2003835-2003854 None:intergenic 45.0%
CTTCACACTTCTTCCTCCAA+TGG + chr3_4:2003836-2003855 Msa0484590:five_prime_UTR 45.0%
ACTGCAGAGCCTACTTTGAA+TGG + chr3_4:2004142-2004161 Msa0484590:CDS 45.0%
! CTTCTGATCGAAAGTGTGTC+TGG + chr3_4:2004386-2004405 Msa0484590:intron 45.0%
! CTTCTCATCGAAAGTGTGTC+TGG + chr3_4:2004645-2004664 Msa0484590:intron 45.0%
! CTTCTGATGGAAAGTGTGTC+TGG + chr3_4:2004756-2004775 Msa0484590:intron 45.0%
! CTTCTGATGGAAAGTGTGTC+TGG + chr3_4:2004756-2004775 Msa0484590:intron 45.0%
! CTTCTGATGGAAAGTGTGTC+TGG + chr3_4:2004756-2004775 Msa0484590:intron 45.0%
! CTTCTGATGGAAAGTGTGTC+TGG + chr3_4:2004756-2004775 Msa0484590:intron 45.0%
! GACATGTAAGTGTGTCACTG+CGG + chr3_4:2005220-2005239 Msa0484590:intron 45.0%
TTTGGTGAAATAGGGGTTGC+TGG - chr3_4:2005400-2005419 None:intergenic 45.0%
!! AGCAGATCTTTAGTGCTGGT+GGG + chr3_4:2005981-2006000 Msa0484590:CDS 45.0%
!! CTCTTGTGTTCTTGGTGTCA+AGG + chr3_4:2006020-2006039 Msa0484590:CDS 45.0%
GGCTAAACGTCGATGCTTTA+CGG - chr3_4:2006213-2006232 None:intergenic 45.0%
GATGAGAGTGACCTAAGAAG+AGG + chr3_4:2006284-2006303 Msa0484590:CDS 45.0%
GCCATATGTGTGAGGTGTAA+AGG - chr3_4:2006477-2006496 None:intergenic 45.0%
AGTTTCAGGCCATATGTGTG+AGG - chr3_4:2006485-2006504 None:intergenic 45.0%
CGAGTTCGAATAGAGGCAAA+TGG - chr3_4:2006703-2006722 None:intergenic 45.0%
! ACCACTTCGAGTTCGAATAG+AGG - chr3_4:2006710-2006729 None:intergenic 45.0%
!! GTATGATGATGGAACTCACC+TGG - chr3_4:2006881-2006900 None:intergenic 45.0%
TCTTTCATATTCACCGGGCA+GGG - chr3_4:2006964-2006983 None:intergenic 45.0%
TTCTTTCATATTCACCGGGC+AGG - chr3_4:2006965-2006984 None:intergenic 45.0%
GGATAGGTCAACCCCTTAAA+TGG + chr3_4:2006994-2007013 Msa0484590:intron 45.0%
! TTTTACACTGGCAGCGATCA+AGG - chr3_4:2007292-2007311 None:intergenic 45.0%
TTGATCGCTGCCAGTGTAAA+AGG + chr3_4:2007291-2007310 Msa0484590:CDS 45.0%
! AACTGCAGCTCCTTTTACAC+TGG - chr3_4:2007304-2007323 None:intergenic 45.0%
! AAAGGAGCTGCAGTTTTCAG+CGG + chr3_4:2007309-2007328 Msa0484590:CDS 45.0%
TATGTCGTCGACAACTTGGA+AGG - chr3_4:2007391-2007410 None:intergenic 45.0%
CCAATATGTCGTCGACAACT+TGG - chr3_4:2007395-2007414 None:intergenic 45.0%
CCAAGTTGTCGACGACATAT+TGG + chr3_4:2007392-2007411 Msa0484590:CDS 45.0%
CAACGCGAAAATTACAGGAG+CGG - chr3_4:2007484-2007503 None:intergenic 45.0%
TCTTGACGAAGCGATCAAGT+TGG + chr3_4:2007560-2007579 Msa0484590:CDS 45.0%
GCTAAACGATACACACTTGG+AGG - chr3_4:2007669-2007688 None:intergenic 45.0%
!! TCGTTTAGCTCTTGAGGACA+TGG + chr3_4:2007680-2007699 Msa0484590:CDS 45.0%
!! ACAAAGGGAGAAGGTGTTGA+TGG - chr3_4:2007819-2007838 None:intergenic 45.0%
!! GGTCACGAGTTTTGGTGAAG+TGG - chr3_4:2003753-2003772 None:intergenic 50.0%
!! GTGTGAAGAAGGGGGTGTTA+TGG - chr3_4:2003824-2003843 None:intergenic 50.0%
GCGCTATAGTACCGCAATAG+CGG + chr3_4:2005699-2005718 Msa0484590:intron 50.0%
GAAAAGCAAGAAGGCTCAGC+AGG - chr3_4:2005839-2005858 None:intergenic 50.0%
GCTGAGCAGATCTTTAGTGC+TGG + chr3_4:2005977-2005996 Msa0484590:CDS 50.0%
! GAGCAGATCTTTAGTGCTGG+TGG + chr3_4:2005980-2005999 Msa0484590:CDS 50.0%
!! TCTTTAGTGCTGGTGGGAAG+AGG + chr3_4:2005987-2006006 Msa0484590:CDS 50.0%
GACACCAAGAACACAAGAGC+CGG - chr3_4:2006019-2006038 None:intergenic 50.0%
GTGTATGCAAGCGTGTGACA+TGG - chr3_4:2006096-2006115 None:intergenic 50.0%
ATGGAGACCAGCAGAGTAGA+TGG - chr3_4:2006684-2006703 None:intergenic 50.0%
GCCTCTATTCGAACTCGAAG+TGG + chr3_4:2006706-2006725 Msa0484590:intron 50.0%
TTCCAAGATTCAACCCTGCC+CGG + chr3_4:2006948-2006967 Msa0484590:intron 50.0%
! ACTTGCGCGCAGGGTTATTT+TGG + chr3_4:2007048-2007067 Msa0484590:intron 50.0%
CGAAAATTACAGGAGCGGTG+AGG - chr3_4:2007479-2007498 None:intergenic 50.0%
! CGCTCCTGTAATTTTCGCGT+TGG + chr3_4:2007482-2007501 Msa0484590:CDS 50.0%
TGGTGGGAAGAGGATGAGAC+CGG + chr3_4:2005997-2006016 Msa0484590:CDS 55.0%
! GAGACCGGCTCTTGTGTTCT+TGG + chr3_4:2006012-2006031 Msa0484590:CDS 55.0%
! CTCAAGGCCATGTAGCTCTG+CGG - chr3_4:2006050-2006069 None:intergenic 55.0%
TGGAACAAGAGTGGCAGTGC+TGG + chr3_4:2006779-2006798 Msa0484590:CDS 55.0%
AATAACCCTGCGCGCAAGTG+TGG - chr3_4:2007047-2007066 None:intergenic 55.0%
TACACTGGCAGCGATCAAGG+AGG - chr3_4:2007289-2007308 None:intergenic 55.0%
ACGCAATCGGCAGAGCAACT+TGG + chr3_4:2007420-2007439 Msa0484590:CDS 55.0%
GAGCAACTTGGAAAGCCTGC+AGG + chr3_4:2007432-2007451 Msa0484590:CDS 55.0%
ACTTGGAAAGCCTGCAGGCA+CGG + chr3_4:2007437-2007456 Msa0484590:CDS 55.0%
AGGAGCGGTGAGGTTACCTT+TGG - chr3_4:2007469-2007488 None:intergenic 55.0%
!! ACAAGAGTGGCAGTGCTGGC+TGG + chr3_4:2006783-2006802 Msa0484590:CDS 60.0%
CACCGGGCAGGGTTGAATCT+TGG - chr3_4:2006953-2006972 None:intergenic 60.0%
CGGTGAGGTTACCTTTGGCG+AGG - chr3_4:2007464-2007483 None:intergenic 60.0%
AGGGCGACCGCAGAGCTACA+TGG + chr3_4:2006040-2006059 Msa0484590:CDS 65.0%
TGGGCTCCACACTTGCGCGC+AGG + chr3_4:2007038-2007057 Msa0484590:intron 70.0%
GGGCTCCACACTTGCGCGCA+GGG + chr3_4:2007039-2007058 Msa0484590:intron 70.0%
TTGGCGAGGTCCGTGCCTGC+AGG - chr3_4:2007450-2007469 None:intergenic 70.0%
GCAGGCACGGACCTCGCCAA+AGG + chr3_4:2007450-2007469 Msa0484590:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 2003729 2008093 2003729 ID=Msa0484590;Name=Msa0484590
chr3_4 mRNA 2003729 2008093 2003729 ID=Msa0484590-mRNA-1;Parent=Msa0484590;Name=Msa0484590-mRNA-1;_AED=0.04;_eAED=0.04;_QI=212|1|1|1|0.83|0.71|7|340|419
chr3_4 exon 2003729 2004163 2003729 ID=Msa0484590-mRNA-1:exon:617;Parent=Msa0484590-mRNA-1
chr3_4 exon 2005350 2005477 2005350 ID=Msa0484590-mRNA-1:exon:618;Parent=Msa0484590-mRNA-1
chr3_4 exon 2005941 2006068 2005941 ID=Msa0484590-mRNA-1:exon:619;Parent=Msa0484590-mRNA-1
chr3_4 exon 2006202 2006305 2006202 ID=Msa0484590-mRNA-1:exon:620;Parent=Msa0484590-mRNA-1
chr3_4 exon 2006754 2006881 2006754 ID=Msa0484590-mRNA-1:exon:621;Parent=Msa0484590-mRNA-1
chr3_4 exon 2007183 2008010 2007183 ID=Msa0484590-mRNA-1:exon:622;Parent=Msa0484590-mRNA-1
chr3_4 exon 2008033 2008093 2008033 ID=Msa0484590-mRNA-1:exon:623;Parent=Msa0484590-mRNA-1
chr3_4 five_prime_UTR 2003729 2003940 2003729 ID=Msa0484590-mRNA-1:five_prime_utr;Parent=Msa0484590-mRNA-1
chr3_4 CDS 2003941 2004163 2003941 ID=Msa0484590-mRNA-1:cds;Parent=Msa0484590-mRNA-1
chr3_4 CDS 2005350 2005477 2005350 ID=Msa0484590-mRNA-1:cds;Parent=Msa0484590-mRNA-1
chr3_4 CDS 2005941 2006068 2005941 ID=Msa0484590-mRNA-1:cds;Parent=Msa0484590-mRNA-1
chr3_4 CDS 2006202 2006305 2006202 ID=Msa0484590-mRNA-1:cds;Parent=Msa0484590-mRNA-1
chr3_4 CDS 2006754 2006881 2006754 ID=Msa0484590-mRNA-1:cds;Parent=Msa0484590-mRNA-1
chr3_4 CDS 2007183 2007731 2007183 ID=Msa0484590-mRNA-1:cds;Parent=Msa0484590-mRNA-1
chr3_4 three_prime_UTR 2007732 2008010 2007732 ID=Msa0484590-mRNA-1:three_prime_utr;Parent=Msa0484590-mRNA-1
chr3_4 three_prime_UTR 2008033 2008093 2008033 ID=Msa0484590-mRNA-1:three_prime_utr;Parent=Msa0484590-mRNA-1
Gene Sequence

>Msa0484590

ATGATGTCTGTCACTAGCAAAAGCATTGATTTTTTTGGTAAAAACTTGGTTTCTTGTGGCTGTTCTTCCAATGCTTCTTTTCATAGGTATGAAGTCAAGAATTATGCTAAGGTGAATTCTAAAGGGTGTGGAAATGGAGCTCGTAAATTGGTTTGTTGTAAGAAGAGGAATACTCATCAATATCGTGTTTCTTCTATGGATACTGCAGAGCCTACTTTGAATGGTGGAGCAATTAAAGACCTTGCAAAAGGATTGAACTTGAAGAGTTATCCAGCAACCCCTATTTCACCAAATAGGTTGTTTGAAGTAGTCTCCGATGATCTTCAAACACTCAATAAAAATCTTCAGTCTATTGTAGGTGCAGAAAATCCAGTTTTAATATCTGCAGCTGAGCAGATCTTTAGTGCTGGTGGGAAGAGGATGAGACCGGCTCTTGTGTTCTTGGTGTCAAGGGCGACCGCAGAGCTACATGGCCTTGAGGATCTTACCGTAAAGCATCGACGTTTAGCCGAGATAGTTGAAATGATTCATACTGCAAGTTTGATACATGATGATGTGTTAGATGAGAGTGACCTAAGAAGAGGGAAGGAAACTGTTCATCAAATGTTTGGAACAAGAGTGGCAGTGCTGGCTGGAGACTTCATGTTTGCACAATCATCATGGTATCTCGCCAACCTTGAAAACATTGAAGTCATTAAACTTATCAGCCAGGTGATTAAAGATTTTGCTAGTGGAGAAATAAAGCAAGCTTCTAGCTTGTTTGATTGTGATGTTCAGCTCGACGAGTATCTAATCAAGAGTTATTTTAAGACAGCCTCCTTGATCGCTGCCAGTGTAAAAGGAGCTGCAGTTTTCAGCGGTTCTGACAGCAGCATGACTGAGAAAATGTTCGAATACGGGAAGAATCTCGGTCTCTCCTTCCAAGTTGTCGACGACATATTGGATTTCACGCAATCGGCAGAGCAACTTGGAAAGCCTGCAGGCACGGACCTCGCCAAAGGTAACCTCACCGCTCCTGTAATTTTCGCGTTGGAGAAAGAACCCAAATTGAGGGATATCATTGAGTCTGAATTTAGCGAGATTGGTTCTCTTGACGAAGCGATCAAGTTGGTTAAGAGTTGTGGGGGAATCGAAAGAGCACAAGAGTTGGCAAAAGAGAAAGCTGATCTTGCTATTCAAAGTCTTCAATGTCTTCCTCCAAGTGTGTATCGTTTAGCTCTTGAGGACATGGTGACATATAATCTTCAAAGGATTGCATAA

Protein sequence

>Msa0484590

MMSVTSKSIDFFGKNLVSCGCSSNASFHRYEVKNYAKVNSKGCGNGARKLVCCKKRNTHQYRVSSMDTAEPTLNGGAIKDLAKGLNLKSYPATPISPNRLFEVVSDDLQTLNKNLQSIVGAENPVLISAAEQIFSAGGKRMRPALVFLVSRATAELHGLEDLTVKHRRLAEIVEMIHTASLIHDDVLDESDLRRGKETVHQMFGTRVAVLAGDFMFAQSSWYLANLENIEVIKLISQVIKDFASGEIKQASSLFDCDVQLDEYLIKSYFKTASLIAASVKGAAVFSGSDSSMTEKMFEYGKNLGLSFQVVDDILDFTQSAEQLGKPAGTDLAKGNLTAPVIFALEKEPKLRDIIESEFSEIGSLDEAIKLVKSCGGIERAQELAKEKADLAIQSLQCLPPSVYRLALEDMVTYNLQRIA*