AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0479890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0479890 MtrunA17_Chr3g0144411 85.010 507 63 2 173 668 41 545 0.0 896
Msa0479890 MtrunA17_Chr3g0144411 76.981 265 50 1 1 254 28 292 9.50e-133 401
Msa0479890 MtrunA17_Chr3g0144411 60.123 163 52 2 14 163 131 293 1.24e-51 187
Msa0479890 MtrunA17_Chr3g0144391 75.356 491 119 2 179 668 23 512 0.0 766
Msa0479890 MtrunA17_Chr3g0144391 67.647 238 75 1 1 236 28 265 9.12e-106 330
Msa0479890 MtrunA17_Chr3g0144391 63.801 221 80 0 127 347 41 261 3.03e-88 285
Msa0479890 MtrunA17_Chr3g0144391 59.414 239 96 1 87 324 23 261 3.45e-86 279
Msa0479890 MtrunA17_Chr3g0144391 57.741 239 100 1 64 301 23 261 2.67e-82 269
Msa0479890 MtrunA17_Chr3g0144391 59.649 114 40 2 14 123 156 267 7.12e-32 130
Msa0479890 MtrunA17_Chr4g0034731 41.587 416 183 12 286 662 39 433 1.86e-94 298
Msa0479890 MtrunA17_Chr4g0034691 32.630 711 361 26 8 664 65 711 2.89e-93 304
Msa0479890 MtrunA17_Chr4g0034451 56.000 225 97 2 439 661 302 526 3.24e-92 296
Msa0479890 MtrunA17_Chr4g0034721 35.603 514 277 15 153 664 118 579 1.43e-91 295
Msa0479890 MtrunA17_Chr6g0485051 57.073 205 85 3 460 661 1 205 2.11e-70 227
Msa0479890 MtrunA17_Chr3g0144451 47.489 219 112 1 446 661 57 275 3.86e-69 227
Msa0479890 MtrunA17_Chr4g0034821 46.575 219 114 1 446 661 73 291 4.02e-66 219
Msa0479890 MtrunA17_Chr3g0138231 46.119 219 115 1 446 661 48 266 7.08e-66 218
Msa0479890 MtrunA17_Chr3g0144421 42.466 219 122 2 447 662 86 303 3.51e-60 204
Msa0479890 MtrunA17_Chr1g0147271 41.284 218 118 5 448 660 171 383 8.34e-46 167
Msa0479890 MtrunA17_Chr1g0147321 40.000 215 122 4 448 660 27 236 2.55e-45 162
Msa0479890 MtrunA17_Chr1g0147291 39.013 223 129 4 440 660 48 265 1.05e-44 160
Msa0479890 MtrunA17_Chr1g0147261 39.720 214 122 4 448 659 89 297 7.27e-44 159
Msa0479890 MtrunA17_Chr1g0147301 38.938 226 129 5 440 660 62 283 3.71e-43 157
Msa0479890 MtrunA17_Chr1g0147331 39.070 215 123 4 448 659 113 322 1.36e-42 156
Msa0479890 MtrunA17_Chr1g0146631 39.070 215 123 4 448 659 113 322 2.02e-42 156
Msa0479890 MtrunA17_Chr1g0147251 38.208 212 125 3 448 659 35 240 2.06e-41 150
Msa0479890 MtrunA17_Chr3g0139431 40.183 219 122 6 448 661 107 321 7.86e-41 151
Msa0479890 MtrunA17_Chr1g0147311 38.356 219 124 5 448 660 141 354 2.59e-40 151
Msa0479890 MtrunA17_Chr1g0147241 38.710 217 125 4 446 659 99 310 3.62e-38 144
Msa0479890 MtrunA17_Chr4g0034051 60.976 82 30 2 586 665 2 83 3.27e-27 105
Msa0479890 MtrunA17_Chr5g0413591 33.178 214 121 8 448 650 415 617 2.40e-25 111
Msa0479890 MtrunA17_Chr8g0365401 32.301 226 125 7 448 659 412 623 1.46e-24 108
Msa0479890 MtrunA17_Chr3g0117791 32.719 217 118 6 448 650 413 615 3.84e-24 107
Msa0479890 MtrunA17_Chr8g0365361 32.432 222 112 7 448 650 181 383 4.31e-24 105
Msa0479890 MtrunA17_Chr8g0365381 31.532 222 134 6 448 660 429 641 5.09e-24 107
Msa0479890 MtrunA17_Chr4g0034711 56.000 75 33 0 434 508 20 94 3.30e-22 92.0
Msa0479890 MtrunA17_Chr8g0355871 32.110 218 122 7 448 663 31 224 2.34e-21 93.6
Msa0479890 MtrunA17_Chr4g0076231 35.256 156 96 4 507 660 5 157 1.11e-20 89.4
Msa0479890 MtrunA17_Chr8g0355321 36.478 159 89 6 504 661 155 302 2.22e-19 89.4
Msa0479890 MtrunA17_Chr5g0412951 27.979 193 122 5 474 659 25 207 9.94e-19 85.5
Msa0479890 MtrunA17_Chr5g0412991 29.348 184 113 5 474 650 226 399 1.76e-18 88.6
Msa0479890 MtrunA17_Chr5g0412991 28.249 177 110 5 474 643 18 184 2.39e-15 79.0
Msa0479890 MtrunA17_Chr5g0412981 29.348 184 113 5 474 650 226 399 1.86e-18 88.2
Msa0479890 MtrunA17_Chr5g0412981 28.249 177 110 5 474 643 18 184 3.09e-15 78.6
Msa0479890 MtrunA17_Chr8g0355331 34.177 158 92 5 505 661 275 421 2.80e-18 88.2
Msa0479890 MtrunA17_Chr8g0355841 34.667 150 88 5 512 661 370 509 2.05e-17 85.9
Msa0479890 MtrunA17_Chr8g0355311 32.432 148 90 5 514 661 53 190 2.61e-17 80.9
Msa0479890 MtrunA17_Chr8g0355861 30.233 215 128 7 447 661 68 260 3.49e-17 82.4
Msa0479890 MtrunA17_Chr4g0034021 64.151 53 19 0 434 486 204 256 2.45e-15 76.6
Msa0479890 MtrunA17_Chr8g0355831 33.333 141 84 4 521 661 221 351 7.39e-15 76.6
Msa0479890 MtrunA17_Chr1g0168781 32.000 150 93 4 512 661 119 259 8.89e-14 72.0
Msa0479890 MtrunA17_Chr8g0371951 38.667 75 43 2 578 650 14 87 3.30e-11 60.1
Msa0479890 MtrunA17_Chr5g0413021 37.037 81 49 2 580 659 48 127 4.85e-11 60.8
Msa0479890 MtrunA17_Chr4g0034031 42.857 56 32 0 507 562 1 56 6.50e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0479890 AT1G49320.1 33.942 274 165 6 399 660 9 278 2.42e-44 160
Msa0479890 AT5G25610.1 38.073 218 125 6 448 659 176 389 6.44e-39 148
Msa0479890 AT1G70370.2 32.727 220 134 6 448 660 411 623 2.37e-25 111
Msa0479890 AT1G70370.1 32.727 220 134 6 448 660 411 623 2.37e-25 111
Msa0479890 AT1G23760.1 33.166 199 113 5 471 660 432 619 3.52e-24 108
Msa0479890 AT1G60390.1 29.798 198 117 5 472 659 435 620 2.20e-21 99.4

Find 191 sgRNAs with CRISPR-Local

Find 428 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAATCAAGTTTATCTTGA+TGG 0.211968 3_3:-85063265 Msa0479890:CDS
AGGATATCTATGCTCCTAAA+TGG 0.228868 3_3:-85062340 Msa0479890:CDS
GAATTTGTTCATAGTGTTCT+TGG 0.231624 3_3:-85062452 Msa0479890:CDS
TTTGCAGAACTACACCATTT+TGG 0.234201 3_3:-85062372 Msa0479890:CDS
TCCCTGTAAAGCACGTTCTA+TGG 0.238519 3_3:-85062100 Msa0479890:CDS
GTCTTTCATGTCTTCACCTT+GGG 0.240047 3_3:+85062550 None:intergenic
TCCAATCAAGTTTATCTTGA+TGG 0.240985 3_3:-85063058 Msa0479890:CDS
GATAAACTTGATTGAAGTTT+GGG 0.247881 3_3:+85063272 None:intergenic
AGGTCTTCAAAGTTCTTCTA+AGG 0.253474 3_3:-85062250 Msa0479890:CDS
ATCCTTTGAGATTTCCAAAA+TGG 0.256902 3_3:+85062358 None:intergenic
GATAAACTTGATTGGAGTTT+GGG 0.256939 3_3:+85063065 None:intergenic
TCTAATCAAGTTTATCTTGA+TGG 0.268313 3_3:-85062989 Msa0479890:CDS
GATAAACTTGATTAGAGTTT+GGG 0.274295 3_3:+85062996 None:intergenic
GATAAACTTGGTTGGAGTTT+GGG 0.274888 3_3:+85063134 None:intergenic
GATAAACTTGGTTGGAGTTT+GGG 0.274888 3_3:+85063617 None:intergenic
TCCAATCGAGTTTATCTTGA+TGG 0.276513 3_3:-85063403 Msa0479890:CDS
GGGTGACAAGCTACCCATTT+AGG 0.279438 3_3:+85062326 None:intergenic
TCCAACCAAGTTTATCTTGA+TGG 0.283723 3_3:-85063127 Msa0479890:CDS
TCCAATCAAGTTTACCTTGA+TGG 0.284115 3_3:-85062920 Msa0479890:CDS
TCCAATCAAGTTTACCTTGA+TGG 0.284115 3_3:-85063196 Msa0479890:CDS
GCGAACTCCATGAAGAAAAT+TGG 0.289076 3_3:-85062806 Msa0479890:CDS
GCCCATAGAACGTGCTTTAC+AGG 0.291191 3_3:+85062098 None:intergenic
TACAATCAAGTTTACCTTGA+TGG 0.294768 3_3:-85063541 Msa0479890:CDS
TCTAATCAAGTTTACCTTGA+TGG 0.295765 3_3:-85063679 Msa0479890:CDS
AGATAAACTTGATTGAAGTT+TGG 0.296038 3_3:+85063271 None:intergenic
TCCAATCAAGTTTACCTTGA+TGG 0.298027 3_3:-85063334 Msa0479890:CDS
AGATAAACTTGGTTGGAGTT+TGG 0.299383 3_3:+85063133 None:intergenic
CTCAATCAGGCTTACCTTGA+TGG 0.299708 3_3:-85062851 Msa0479890:CDS
AGATAAACTTGATTGGAGTT+TGG 0.300825 3_3:+85063064 None:intergenic
GTTGATCAGCCTTACCTTGA+TGG 0.301941 3_3:-85064018 Msa0479890:CDS
AGATAAACTTGATTAGAGTT+TGG 0.304429 3_3:+85062995 None:intergenic
AGATAAACTTGGTTGGAGTT+TGG 0.312080 3_3:+85063616 None:intergenic
AGTTGTGTGAATGTTATATT+TGG 0.312223 3_3:+85062421 None:intergenic
TTACCTAGATGGATGGTTAA+AGG 0.317562 3_3:-85063806 Msa0479890:CDS
AGGTAAACTTGATTGGAGTT+AGG 0.321370 3_3:+85062926 None:intergenic
AGGTAAACTTGATTGGAGTT+AGG 0.321370 3_3:+85063340 None:intergenic
AGGTAAACTTGATTGTAGTT+AGG 0.321428 3_3:+85063547 None:intergenic
AGGTAAACTTGATTAGAGTT+AGG 0.324677 3_3:+85063685 None:intergenic
TGGAGACATAATGGATGCTT+TGG 0.329852 3_3:-85062219 Msa0479890:CDS
AGGTAAACTTGATTGGAGTT+AGG 0.334772 3_3:+85063754 None:intergenic
CTCAATCAGGCTTACCTTGA+TGG 0.351388 3_3:-85063472 Msa0479890:CDS
TCTAATCCAAGTTATCTTGA+TGG 0.360948 3_3:-85063955 Msa0479890:CDS
AGTTGAAATATAAAATGATT+AGG 0.362732 3_3:+85062164 None:intergenic
GGTAAACTTGATTGTAGTTA+GGG 0.371166 3_3:+85063548 None:intergenic
TCCAATCAAGTTTACCTAGA+TGG 0.372314 3_3:-85063817 Msa0479890:CDS
TTGGTTCAGTTGGTGGCCTC+TGG 0.375839 3_3:+85062065 None:intergenic
GTTCTTCTAAGGGGTCAATA+TGG 0.383693 3_3:-85062239 Msa0479890:CDS
TCGATCTTGCTTTCTCAACT+TGG 0.386255 3_3:+85063089 None:intergenic
ACCAATCAAGTTTACCTAGA+TGG 0.387215 3_3:-85063886 Msa0479890:CDS
AGGTAAACTTGATTGGAGTT+AGG 0.390322 3_3:+85063202 None:intergenic
TGGCAGTAGTAAAGAGCATA+AGG 0.391483 3_3:+85062293 None:intergenic
CTAGTTCCCTTTGGTTCAGT+TGG 0.397858 3_3:+85062055 None:intergenic
TTGATCTTGCCTTCTCAACT+TGG 0.398535 3_3:+85063158 None:intergenic
ACTATGGATGATCTTTATGT+AGG 0.401691 3_3:-85062707 Msa0479890:CDS
GGTAAACTTGATTGGAGTTA+GGG 0.403936 3_3:+85062927 None:intergenic
GGTAAACTTGATTGGAGTTA+GGG 0.403936 3_3:+85063341 None:intergenic
GGTAAACTTGATTGGAGTTA+GGG 0.403936 3_3:+85063755 None:intergenic
TCGATCTTGCTTTCTCAACT+TGG 0.408406 3_3:+85063020 None:intergenic
GAGAATAGTTGAAGAAGGCT+TGG 0.410178 3_3:+85062590 None:intergenic
TCCAATCAAGTTTACCTTGA+CGG 0.412584 3_3:-85063748 Msa0479890:CDS
GTTCCCTTTGGTTCAGTTGG+TGG 0.415275 3_3:+85062058 None:intergenic
TGAGAGAGAATAGTTGAAGA+AGG 0.421944 3_3:+85062585 None:intergenic
GGTAAACTTGATTAGAGTTA+GGG 0.423201 3_3:+85063686 None:intergenic
AACCATCCATCAAGATAACT+TGG 0.424143 3_3:+85063949 None:intergenic
CGTGCTTTACAGGGAAGAAA+TGG 0.426994 3_3:+85062108 None:intergenic
CTAACTTGAATGCCTTTGTA+TGG 0.427506 3_3:+85062738 None:intergenic
ATCAGCCTTACCTTGATGGC+TGG 0.428156 3_3:-85064014 Msa0479890:CDS
TCCATCTAGGTAAACTTGAT+TGG 0.430236 3_3:+85063816 None:intergenic
TTGGTGGCCTCTGGTGGGAG+TGG 0.432130 3_3:+85062074 None:intergenic
CAACTACTTGGAATGAAGCC+TGG 0.433769 3_3:-85062146 Msa0479890:CDS
TCCATCAAGGTAAACTTGAT+TGG 0.436782 3_3:+85062919 None:intergenic
TCCATCAAGGTAAACTTGAT+TGG 0.436782 3_3:+85063195 None:intergenic
GTTCAGTTGGTGGCCTCTGG+TGG 0.441778 3_3:+85062068 None:intergenic
TATCTTTCAACCATCCATCT+AGG 0.444354 3_3:+85063872 None:intergenic
TGTCTTTCATGTCTTCACCT+TGG 0.444739 3_3:+85062549 None:intergenic
AACTTGATTGTAGTTAGGGT+TGG 0.447399 3_3:+85063552 None:intergenic
GAAAGATACCAAGGATCAAA+TGG 0.449700 3_3:-85062891 Msa0479890:CDS
GCCATCAAGGTAAACTTGAT+TGG 0.450457 3_3:+85063333 None:intergenic
AACTATCCACAACCTCAATC+AGG 0.453031 3_3:-85063485 Msa0479890:CDS
AAGTTAGCATATTCTCTGAT+AGG 0.453535 3_3:+85062662 None:intergenic
GTGAATTTGAACCCACAAAA+GGG 0.456334 3_3:-85062514 Msa0479890:CDS
GGTAAGCCTGATTGAGGTTG+TGG 0.457575 3_3:+85063479 None:intergenic
CAAGACATGGCAGAATCAAA+AGG 0.457794 3_3:-85062782 Msa0479890:CDS
ACCAATACACAACCTCAATC+AGG 0.459181 3_3:-85062864 Msa0479890:CDS
TCCGTCAAGGTAAACTTGAT+TGG 0.460129 3_3:+85063747 None:intergenic
TCCATCAAGATAAACTTGAT+TGG 0.461282 3_3:+85063057 None:intergenic
GAAAGACACCAAAGATCAAA+AGG 0.461407 3_3:-85063512 Msa0479890:CDS
ATCAAGTTTACCTTGATGGC+TGG 0.461599 3_3:-85063537 Msa0479890:CDS
GGGTCAATATGGAGACATAA+TGG 0.464907 3_3:-85062228 Msa0479890:CDS
TCCAACCAAGTTTATCTTGA+CGG 0.468204 3_3:-85063610 Msa0479890:CDS
TGTGAATTTGAACCCACAAA+AGG 0.468537 3_3:-85062515 Msa0479890:CDS
AGAGCATAAGGGTAAGGCCT+AGG 0.470306 3_3:+85062305 None:intergenic
AACTACTTGGAATGAAGCCT+GGG 0.472218 3_3:-85062145 Msa0479890:CDS
TCCATCTAGGTAAACTTGAT+TGG 0.472763 3_3:+85063885 None:intergenic
ACTAGCTATCCCACAACATC+AGG 0.475940 3_3:-85062401 Msa0479890:CDS
AACTTGATTGGAGTTAGGGG+TGG 0.478066 3_3:+85062931 None:intergenic
AACTTGATTGGAGTTAGGGG+TGG 0.478066 3_3:+85063345 None:intergenic
AACTTGATTGGAGTTAGGGG+TGG 0.478066 3_3:+85063759 None:intergenic
CCCTGTAAAGCACGTTCTAT+GGG 0.478082 3_3:-85062099 Msa0479890:CDS
CTATGGATGATCTTTATGTA+GGG 0.478680 3_3:-85062706 Msa0479890:CDS
GGTAGTTGCGACTTGGAGAA+AGG 0.479066 3_3:+85062611 None:intergenic
GCCTGATTGAGGTTGTGTAT+TGG 0.481303 3_3:+85062863 None:intergenic
GGAGACATAATGGATGCTTT+GGG 0.482669 3_3:-85062218 Msa0479890:CDS
CTACCTAGACATAGGGAGTA+AGG 0.491781 3_3:-85062270 Msa0479890:CDS
ATCAGGCTTACCTTGATGGT+TGG 0.493059 3_3:-85062847 Msa0479890:CDS
TAATGAAGTAGGACAAGCTT+TGG 0.493432 3_3:+85062487 None:intergenic
TTCAGTTGGTGGCCTCTGGT+GGG 0.494537 3_3:+85062069 None:intergenic
GATAAACTCGATTGGAGTTG+TGG 0.497172 3_3:+85063410 None:intergenic
ATCAAGTTTACCTTGATGGC+TGG 0.497883 3_3:-85063330 Msa0479890:CDS
TATCCTTTAACCATCCATCT+AGG 0.498476 3_3:+85063803 None:intergenic
GAAAGATACCAAGAATCAAA+AGG 0.504634 3_3:-85063857 Msa0479890:CDS
ATCAGGCTTACCTTGATGGC+TGG 0.504911 3_3:-85063468 Msa0479890:CDS
GGATATCTATGCTCCTAAAT+GGG 0.506971 3_3:-85062339 Msa0479890:CDS
ATCAAGTTTATCTTGATGGA+TGG 0.507762 3_3:-85062985 Msa0479890:CDS
AAGGCTTGGTAGTTGCGACT+TGG 0.508594 3_3:+85062604 None:intergenic
ATCAAGTTTATCTTGATGGA+TGG 0.510245 3_3:-85063054 Msa0479890:CDS
ATCAAGTTTATCTTGATGGA+TGG 0.510245 3_3:-85063261 Msa0479890:CDS
ATAAACTCGATTGGAGTTGT+GGG 0.512497 3_3:+85063411 None:intergenic
CCAACCAAGTTTATCTTGAC+GGG 0.512790 3_3:-85063609 Msa0479890:CDS
TGTCTTTCAACCAGCCATCA+AGG 0.516147 3_3:+85063527 None:intergenic
CATCTTTCAGCCAGCCATCA+AGG 0.517526 3_3:+85063320 None:intergenic
ACCATCCATCAAGATAAACT+TGG 0.519057 3_3:+85063122 None:intergenic
TGGCTGGTTAAAAGATAGTC+GGG 0.523097 3_3:-85063452 Msa0479890:CDS
ATCAAGTTTACCTTGATGGA+TGG 0.523440 3_3:-85063675 Msa0479890:CDS
ATCGAGTTTATCTTGATGGA+TGG 0.523903 3_3:-85063399 Msa0479890:CDS
TTAAGCCAGCCATCAAGGTA+AGG 0.525753 3_3:+85064009 None:intergenic
ATCAAGTTTACCTTGATGGA+TGG 0.525923 3_3:-85062916 Msa0479890:CDS
ACCAAGTTTATCTTGATGGA+TGG 0.525923 3_3:-85063123 Msa0479890:CDS
ATCAAGTTTACCTTGATGGA+TGG 0.525923 3_3:-85063192 Msa0479890:CDS
GATTCATGTCAGACGTGTCT+AGG 0.529464 3_3:+85062186 None:intergenic
ATGGCTGGTTAAAAGATAGT+CGG 0.532803 3_3:-85063453 Msa0479890:CDS
TCTTTCATGTCTTCACCTTG+GGG 0.533710 3_3:+85062551 None:intergenic
ATAAACTTGGTTGGAGTTTG+GGG 0.533931 3_3:+85063135 None:intergenic
TAGTAAAGAGCATAAGGGTA+AGG 0.534900 3_3:+85062299 None:intergenic
AACTCGATTGGAGTTGTGGG+TGG 0.536216 3_3:+85063414 None:intergenic
GGTCTTCAAAGTTCTTCTAA+GGG 0.536641 3_3:-85062249 Msa0479890:CDS
AATGGGTAGCTTGTCACCCT+AGG 0.538892 3_3:-85062322 Msa0479890:CDS
AACTTGATTGGAGTTAGGAG+TGG 0.538945 3_3:+85063207 None:intergenic
CTTGATGGATGGTTGAAAGA+TGG 0.539962 3_3:-85062974 Msa0479890:CDS
CTTGATGGATGGTTGAAAGA+TGG 0.539962 3_3:-85063112 Msa0479890:CDS
ATAAACTTGGTTGGAGTTTG+GGG 0.540923 3_3:+85063618 None:intergenic
GGTAAACTTGATTGGTGTTG+TGG 0.546018 3_3:+85063893 None:intergenic
GAAAGATAGCCAAGTTGAGA+AGG 0.546728 3_3:-85063167 Msa0479890:CDS
GGCAGTAGTAAAGAGCATAA+GGG 0.547129 3_3:+85062294 None:intergenic
TCCATCAAGATAAACTCGAT+TGG 0.551426 3_3:+85063402 None:intergenic
GAGCATAAGGGTAAGGCCTA+GGG 0.551678 3_3:+85062306 None:intergenic
ATCCAAGTTATCTTGATGGA+TGG 0.552457 3_3:-85063951 Msa0479890:CDS
GGTAAACTTGATTGGAGTCG+TGG 0.553661 3_3:+85063824 None:intergenic
TATCTTTCAACCATCCATCA+AGG 0.553950 3_3:+85062906 None:intergenic
CAAACGTGCACCTGATGTTG+TGG 0.555390 3_3:+85062391 None:intergenic
CCCATAGAACGTGCTTTACA+GGG 0.559017 3_3:+85062099 None:intergenic
ATCAAGTTTACCTTGACGGA+TGG 0.560773 3_3:-85063744 Msa0479890:CDS
ATCAAGTTTACCTAGATGGA+TGG 0.561030 3_3:-85063813 Msa0479890:CDS
ATCAAGTTTACCTAGATGGA+TGG 0.563100 3_3:-85063882 Msa0479890:CDS
TACTGCCACTACCTAGACAT+AGG 0.566616 3_3:-85062278 Msa0479890:CDS
AAGACATGGCAGAATCAAAA+GGG 0.567319 3_3:-85062781 Msa0479890:CDS
ACCACCCGTCAAGATAAACT+TGG 0.569100 3_3:+85063605 None:intergenic
TCCATCAAGATAAACTTGGT+TGG 0.570341 3_3:+85063126 None:intergenic
TACTCCCTATGTCTAGGTAG+TGG 0.570771 3_3:+85062273 None:intergenic
ACTGCCACTACCTAGACATA+GGG 0.575542 3_3:-85062277 Msa0479890:CDS
GTAAACTTGATTGGAGTCGT+GGG 0.579561 3_3:+85063825 None:intergenic
ACTCGATTGGAGTTGTGGGT+GGG 0.582962 3_3:+85063415 None:intergenic
AGACCTTACTCCCTATGTCT+AGG 0.584376 3_3:+85062267 None:intergenic
CATCAAGGTAAGCCTGATTG+AGG 0.584619 3_3:+85062852 None:intergenic
CATCAAGGTAAGCCTGATTG+AGG 0.584619 3_3:+85063473 None:intergenic
AGTCTTTCAACCAACCATCA+AGG 0.584877 3_3:+85062837 None:intergenic
CTCACAAACGATTCTCCCCA+AGG 0.585857 3_3:-85062566 Msa0479890:CDS
TATCTTTCAACCATCCATCA+AGG 0.588448 3_3:+85063182 None:intergenic
TATCTTTCAACCATCCATCA+AGG 0.588448 3_3:+85063665 None:intergenic
AGCATGGACTCTAATGAAGT+AGG 0.591847 3_3:+85062476 None:intergenic
CCCGTCAAGATAAACTTGGT+TGG 0.599307 3_3:+85063609 None:intergenic
AAACGTGCACCTGATGTTGT+GGG 0.607189 3_3:+85062392 None:intergenic
ACTATGAACAAATTCAAGCA+TGG 0.607524 3_3:+85062460 None:intergenic
AAAGATAGCCAAGTTGAGCA+AGG 0.607835 3_3:-85063235 Msa0479890:CDS
GTCTTCAAAGTTCTTCTAAG+GGG 0.613953 3_3:-85062248 Msa0479890:CDS
ATAAACTTGATTAGAGTTTG+GGG 0.616239 3_3:+85062997 None:intergenic
ATAAACTTGATTGGAGTTTG+GGG 0.619713 3_3:+85063066 None:intergenic
ACAGGGAAGAAATGGCACAT+AGG 0.619730 3_3:+85062116 None:intergenic
TGGCACATAGGAGCTTCCCC+AGG 0.628176 3_3:+85062128 None:intergenic
ATGGGCACCACTCCCACCAG+AGG 0.630918 3_3:-85062081 Msa0479890:CDS
TTCAAAAGTTGACCATACAA+AGG 0.632099 3_3:-85062750 Msa0479890:CDS
TGAATTTGAACCCACAAAAG+GGG 0.632371 3_3:-85062513 Msa0479890:CDS
ATAAACTTGATTGAAGTTTG+GGG 0.634939 3_3:+85063273 None:intergenic
ACCAAGTTTATCTTGACGGG+TGG 0.636426 3_3:-85063606 Msa0479890:CDS
GAAGAAAATTGGACAAGACA+TGG 0.638239 3_3:-85062795 Msa0479890:CDS
GTAAACTTGATTGGAGTTAG+GGG 0.649022 3_3:+85062928 None:intergenic
GTAAACTTGATTGGAGTTAG+GGG 0.649022 3_3:+85063342 None:intergenic
GTAAACTTGATTGGAGTTAG+GGG 0.649022 3_3:+85063756 None:intergenic
TCATGTCAGACGTGTCTAGG+TGG 0.678767 3_3:+85062189 None:intergenic
TGGATGGTTGAAAGATACCA+AGG 0.679634 3_3:-85062900 Msa0479890:CDS
ACTACTTGGAATGAAGCCTG+GGG 0.737264 3_3:-85062144 Msa0479890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTTGAAATATAAAATGATT+AGG + chr3_3:85063963-85063982 None:intergenic 15.0%
!! AGTTGAAATATAAAATGATT+AGG + chr3_3:85063963-85063982 None:intergenic 15.0%
!!! CATTTTATATTTCAACTACT+TGG - chr3_3:85063966-85063985 Msa0479890:CDS 20.0%
!!! CATTTTATATTTCAACTACT+TGG - chr3_3:85063966-85063985 Msa0479890:CDS 20.0%
!!! TTTAGTTTTTTGTTCTTCAG+TGG + chr3_3:85062148-85062167 None:intergenic 25.0%
!!! ATAGCTTTTTTGTTTTCTTC+GGG + chr3_3:85062211-85062230 None:intergenic 25.0%
!!! GATAGCTTTTTTGTTTTCTT+CGG + chr3_3:85062212-85062231 None:intergenic 25.0%
!!! GGATTTTGTTTTTTGAACTT+GGG + chr3_3:85062347-85062366 None:intergenic 25.0%
!!! TGGATTTTGTTTTTTGAACT+TGG + chr3_3:85062348-85062367 None:intergenic 25.0%
!!! AGTTTTTTCCTTTTGATCTT+TGG + chr3_3:85062623-85062642 None:intergenic 25.0%
! ATAAACTTGATTGAAGTTTG+GGG + chr3_3:85062854-85062873 None:intergenic 25.0%
! GATAAACTTGATTGAAGTTT+GGG + chr3_3:85062855-85062874 None:intergenic 25.0%
! AGATAAACTTGATTGAAGTT+TGG + chr3_3:85062856-85062875 None:intergenic 25.0%
! TTCAATCAAGTTTATCTTGA+TGG - chr3_3:85062859-85062878 Msa0479890:CDS 25.0%
! ATAAACTTGATTAGAGTTTG+GGG + chr3_3:85063130-85063149 None:intergenic 25.0%
! GATAAACTTGATTAGAGTTT+GGG + chr3_3:85063131-85063150 None:intergenic 25.0%
! AGATAAACTTGATTAGAGTT+TGG + chr3_3:85063132-85063151 None:intergenic 25.0%
! TCTAATCAAGTTTATCTTGA+TGG - chr3_3:85063135-85063154 Msa0479890:CDS 25.0%
! AGTTGTGTGAATGTTATATT+TGG + chr3_3:85063706-85063725 None:intergenic 25.0%
!!! TTTAGTTTTTTGTTCTTCAG+TGG + chr3_3:85062148-85062167 None:intergenic 25.0%
!!! ATAGCTTTTTTGTTTTCTTC+GGG + chr3_3:85062211-85062230 None:intergenic 25.0%
!!! GATAGCTTTTTTGTTTTCTT+CGG + chr3_3:85062212-85062231 None:intergenic 25.0%
!!! GGATTTTGTTTTTTGAACTT+GGG + chr3_3:85062347-85062366 None:intergenic 25.0%
!!! TGGATTTTGTTTTTTGAACT+TGG + chr3_3:85062348-85062367 None:intergenic 25.0%
!!! AGTTTTTTCCTTTTGATCTT+TGG + chr3_3:85062623-85062642 None:intergenic 25.0%
! ATAAACTTGATTGAAGTTTG+GGG + chr3_3:85062854-85062873 None:intergenic 25.0%
! GATAAACTTGATTGAAGTTT+GGG + chr3_3:85062855-85062874 None:intergenic 25.0%
! AGATAAACTTGATTGAAGTT+TGG + chr3_3:85062856-85062875 None:intergenic 25.0%
! TTCAATCAAGTTTATCTTGA+TGG - chr3_3:85062859-85062878 Msa0479890:CDS 25.0%
! ATAAACTTGATTAGAGTTTG+GGG + chr3_3:85063130-85063149 None:intergenic 25.0%
! GATAAACTTGATTAGAGTTT+GGG + chr3_3:85063131-85063150 None:intergenic 25.0%
! AGATAAACTTGATTAGAGTT+TGG + chr3_3:85063132-85063151 None:intergenic 25.0%
! TCTAATCAAGTTTATCTTGA+TGG - chr3_3:85063135-85063154 Msa0479890:CDS 25.0%
! AGTTGTGTGAATGTTATATT+TGG + chr3_3:85063706-85063725 None:intergenic 25.0%
TCTAATCCAAGTTATCTTGA+TGG - chr3_3:85062169-85062188 Msa0479890:CDS 30.0%
GAAAGATACCAAGAATCAAA+AGG - chr3_3:85062267-85062286 Msa0479890:CDS 30.0%
!! AGTCTTTTCCTTTTGATTCT+TGG + chr3_3:85062278-85062297 None:intergenic 30.0%
! GAATTTTGCTTTCTCAACTT+GGG + chr3_3:85062416-85062435 None:intergenic 30.0%
! TGAATTTTGCTTTCTCAACT+TGG + chr3_3:85062417-85062436 None:intergenic 30.0%
GGTAAACTTGATTAGAGTTA+GGG + chr3_3:85062441-85062460 None:intergenic 30.0%
AGGTAAACTTGATTAGAGTT+AGG + chr3_3:85062442-85062461 None:intergenic 30.0%
TCTAATCAAGTTTACCTTGA+TGG - chr3_3:85062445-85062464 Msa0479890:CDS 30.0%
GGTAAACTTGATTGTAGTTA+GGG + chr3_3:85062579-85062598 None:intergenic 30.0%
AGGTAAACTTGATTGTAGTT+AGG + chr3_3:85062580-85062599 None:intergenic 30.0%
TACAATCAAGTTTACCTTGA+TGG - chr3_3:85062583-85062602 Msa0479890:CDS 30.0%
! TGGATTTTTCTTTCTCAACA+TGG + chr3_3:85062762-85062781 None:intergenic 30.0%
! TGATTTTGCTTTCTCAAGTT+GGG + chr3_3:85062830-85062849 None:intergenic 30.0%
! TTGATTTTGCTTTCTCAAGT+TGG + chr3_3:85062831-85062850 None:intergenic 30.0%
ATCAAGTTTATCTTGATGGA+TGG - chr3_3:85062863-85062882 Msa0479890:CDS 30.0%
ATAAACTTGATTGGAGTTTG+GGG + chr3_3:85063061-85063080 None:intergenic 30.0%
GATAAACTTGATTGGAGTTT+GGG + chr3_3:85063062-85063081 None:intergenic 30.0%
AGATAAACTTGATTGGAGTT+TGG + chr3_3:85063063-85063082 None:intergenic 30.0%
TCCAATCAAGTTTATCTTGA+TGG - chr3_3:85063066-85063085 Msa0479890:CDS 30.0%
TCCATCAAGATAAACTTGAT+TGG + chr3_3:85062863-85062882 None:intergenic 30.0%
ATCAAGTTTATCTTGATGGA+TGG - chr3_3:85062863-85062882 Msa0479890:CDS 30.0%
ATCAAGTTTATCTTGATGGA+TGG - chr3_3:85062863-85062882 Msa0479890:CDS 30.0%
TTCAAAAGTTGACCATACAA+AGG - chr3_3:85063374-85063393 Msa0479890:CDS 30.0%
!!! CAAGTTAGCTTTTTTCACTA+TGG - chr3_3:85063401-85063420 Msa0479890:CDS 30.0%
ACTATGGATGATCTTTATGT+AGG - chr3_3:85063417-85063436 Msa0479890:CDS 30.0%
CTATGGATGATCTTTATGTA+GGG - chr3_3:85063418-85063437 Msa0479890:CDS 30.0%
AAGTTAGCATATTCTCTGAT+AGG + chr3_3:85063465-85063484 None:intergenic 30.0%
!!! ATGTAGTCAGCTACTTTTTT+TGG + chr3_3:85063492-85063511 None:intergenic 30.0%
ACTATGAACAAATTCAAGCA+TGG + chr3_3:85063667-85063686 None:intergenic 30.0%
! GAATTTGTTCATAGTGTTCT+TGG - chr3_3:85063672-85063691 Msa0479890:CDS 30.0%
!! ATCCTTTGAGATTTCCAAAA+TGG + chr3_3:85063769-85063788 None:intergenic 30.0%
TCTAATCCAAGTTATCTTGA+TGG - chr3_3:85062169-85062188 Msa0479890:CDS 30.0%
GAAAGATACCAAGAATCAAA+AGG - chr3_3:85062267-85062286 Msa0479890:CDS 30.0%
!! AGTCTTTTCCTTTTGATTCT+TGG + chr3_3:85062278-85062297 None:intergenic 30.0%
! GAATTTTGCTTTCTCAACTT+GGG + chr3_3:85062416-85062435 None:intergenic 30.0%
! TGAATTTTGCTTTCTCAACT+TGG + chr3_3:85062417-85062436 None:intergenic 30.0%
GGTAAACTTGATTAGAGTTA+GGG + chr3_3:85062441-85062460 None:intergenic 30.0%
AGGTAAACTTGATTAGAGTT+AGG + chr3_3:85062442-85062461 None:intergenic 30.0%
TCTAATCAAGTTTACCTTGA+TGG - chr3_3:85062445-85062464 Msa0479890:CDS 30.0%
GGTAAACTTGATTGTAGTTA+GGG + chr3_3:85062579-85062598 None:intergenic 30.0%
AGGTAAACTTGATTGTAGTT+AGG + chr3_3:85062580-85062599 None:intergenic 30.0%
TACAATCAAGTTTACCTTGA+TGG - chr3_3:85062583-85062602 Msa0479890:CDS 30.0%
! TGGATTTTTCTTTCTCAACA+TGG + chr3_3:85062762-85062781 None:intergenic 30.0%
! TGATTTTGCTTTCTCAAGTT+GGG + chr3_3:85062830-85062849 None:intergenic 30.0%
! TTGATTTTGCTTTCTCAAGT+TGG + chr3_3:85062831-85062850 None:intergenic 30.0%
ATCAAGTTTATCTTGATGGA+TGG - chr3_3:85062863-85062882 Msa0479890:CDS 30.0%
ATAAACTTGATTGGAGTTTG+GGG + chr3_3:85063061-85063080 None:intergenic 30.0%
GATAAACTTGATTGGAGTTT+GGG + chr3_3:85063062-85063081 None:intergenic 30.0%
AGATAAACTTGATTGGAGTT+TGG + chr3_3:85063063-85063082 None:intergenic 30.0%
TCCAATCAAGTTTATCTTGA+TGG - chr3_3:85063066-85063085 Msa0479890:CDS 30.0%
TCCATCAAGATAAACTTGAT+TGG + chr3_3:85062863-85062882 None:intergenic 30.0%
ATCAAGTTTATCTTGATGGA+TGG - chr3_3:85062863-85062882 Msa0479890:CDS 30.0%
ATCAAGTTTATCTTGATGGA+TGG - chr3_3:85062863-85062882 Msa0479890:CDS 30.0%
TTCAAAAGTTGACCATACAA+AGG - chr3_3:85063374-85063393 Msa0479890:CDS 30.0%
!!! CAAGTTAGCTTTTTTCACTA+TGG - chr3_3:85063401-85063420 Msa0479890:CDS 30.0%
ACTATGGATGATCTTTATGT+AGG - chr3_3:85063417-85063436 Msa0479890:CDS 30.0%
CTATGGATGATCTTTATGTA+GGG - chr3_3:85063418-85063437 Msa0479890:CDS 30.0%
AAGTTAGCATATTCTCTGAT+AGG + chr3_3:85063465-85063484 None:intergenic 30.0%
!!! ATGTAGTCAGCTACTTTTTT+TGG + chr3_3:85063492-85063511 None:intergenic 30.0%
ACTATGAACAAATTCAAGCA+TGG + chr3_3:85063667-85063686 None:intergenic 30.0%
! GAATTTGTTCATAGTGTTCT+TGG - chr3_3:85063672-85063691 Msa0479890:CDS 30.0%
!! ATCCTTTGAGATTTCCAAAA+TGG + chr3_3:85063769-85063788 None:intergenic 30.0%
ATCCAAGTTATCTTGATGGA+TGG - chr3_3:85062173-85062192 Msa0479890:CDS 35.0%
AACCATCCATCAAGATAACT+TGG + chr3_3:85062178-85062197 None:intergenic 35.0%
ACCAATCAAGTTTACCTAGA+TGG - chr3_3:85062238-85062257 Msa0479890:CDS 35.0%
TCCATCTAGGTAAACTTGAT+TGG + chr3_3:85062242-85062261 None:intergenic 35.0%
ATCAAGTTTACCTAGATGGA+TGG - chr3_3:85062242-85062261 Msa0479890:CDS 35.0%
TATCTTTCAACCATCCATCT+AGG + chr3_3:85062255-85062274 None:intergenic 35.0%
TCCAATCAAGTTTACCTAGA+TGG - chr3_3:85062307-85062326 Msa0479890:CDS 35.0%
TCCATCTAGGTAAACTTGAT+TGG + chr3_3:85062242-85062261 None:intergenic 35.0%
ATCAAGTTTACCTAGATGGA+TGG - chr3_3:85062242-85062261 Msa0479890:CDS 35.0%
TTACCTAGATGGATGGTTAA+AGG - chr3_3:85062318-85062337 Msa0479890:CDS 35.0%
TATCCTTTAACCATCCATCT+AGG + chr3_3:85062324-85062343 None:intergenic 35.0%
GTAAACTTGATTGGAGTTAG+GGG + chr3_3:85062371-85062390 None:intergenic 35.0%
GGTAAACTTGATTGGAGTTA+GGG + chr3_3:85062372-85062391 None:intergenic 35.0%
AGGTAAACTTGATTGGAGTT+AGG + chr3_3:85062373-85062392 None:intergenic 35.0%
TCCAATCAAGTTTACCTTGA+CGG - chr3_3:85062376-85062395 Msa0479890:CDS 35.0%
ATCAAGTTTACCTTGATGGA+TGG - chr3_3:85062449-85062468 Msa0479890:CDS 35.0%
TATCTTTCAACCATCCATCA+AGG + chr3_3:85062462-85062481 None:intergenic 35.0%
! TCGATTTTGCTTTCTCATCT+TGG + chr3_3:85062486-85062505 None:intergenic 35.0%
ATAAACTTGGTTGGAGTTTG+GGG + chr3_3:85062509-85062528 None:intergenic 35.0%
GATAAACTTGGTTGGAGTTT+GGG + chr3_3:85062510-85062529 None:intergenic 35.0%
AGATAAACTTGGTTGGAGTT+TGG + chr3_3:85062511-85062530 None:intergenic 35.0%
TCCAACCAAGTTTATCTTGA+CGG - chr3_3:85062514-85062533 Msa0479890:CDS 35.0%
! TGGATTTTTCTTTCTCAGCA+TGG + chr3_3:85062555-85062574 None:intergenic 35.0%
AACTTGATTGTAGTTAGGGT+TGG + chr3_3:85062575-85062594 None:intergenic 35.0%
GAAAGACACCAAAGATCAAA+AGG - chr3_3:85062612-85062631 Msa0479890:CDS 35.0%
! TATCTTTTAACCAGCCATCA+AGG + chr3_3:85062669-85062688 None:intergenic 35.0%
! ATGGCTGGTTAAAAGATAGT+CGG - chr3_3:85062671-85062690 Msa0479890:CDS 35.0%
ATAAACTCGATTGGAGTTGT+GGG + chr3_3:85062716-85062735 None:intergenic 35.0%
TCCAATCGAGTTTATCTTGA+TGG - chr3_3:85062721-85062740 Msa0479890:CDS 35.0%
TCCATCAAGATAAACTCGAT+TGG + chr3_3:85062725-85062744 None:intergenic 35.0%
ATCGAGTTTATCTTGATGGA+TGG - chr3_3:85062725-85062744 Msa0479890:CDS 35.0%
GTAAACTTGATTGGAGTTAG+GGG + chr3_3:85062371-85062390 None:intergenic 35.0%
GGTAAACTTGATTGGAGTTA+GGG + chr3_3:85062372-85062391 None:intergenic 35.0%
AGGTAAACTTGATTGGAGTT+AGG + chr3_3:85062373-85062392 None:intergenic 35.0%
TCCAATCAAGTTTACCTTGA+TGG - chr3_3:85062376-85062395 Msa0479890:CDS 35.0%
AGGTAAACTTGATTGGAGTT+AGG + chr3_3:85062373-85062392 None:intergenic 35.0%
TCCAATCAAGTTTACCTTGA+TGG - chr3_3:85062376-85062395 Msa0479890:CDS 35.0%
TCCATCAAGGTAAACTTGAT+TGG + chr3_3:85062449-85062468 None:intergenic 35.0%
ATCAAGTTTACCTTGATGGA+TGG - chr3_3:85062449-85062468 Msa0479890:CDS 35.0%
TATCTTTCAACCATCCATCA+AGG + chr3_3:85062462-85062481 None:intergenic 35.0%
ATAAACTTGGTTGGAGTTTG+GGG + chr3_3:85062509-85062528 None:intergenic 35.0%
GATAAACTTGGTTGGAGTTT+GGG + chr3_3:85062510-85062529 None:intergenic 35.0%
AGATAAACTTGGTTGGAGTT+TGG + chr3_3:85062511-85062530 None:intergenic 35.0%
TCCAACCAAGTTTATCTTGA+TGG - chr3_3:85062514-85062533 Msa0479890:CDS 35.0%
TCCATCAAGATAAACTTGGT+TGG + chr3_3:85063001-85063020 None:intergenic 35.0%
ACCAAGTTTATCTTGATGGA+TGG - chr3_3:85063001-85063020 Msa0479890:CDS 35.0%
ACCATCCATCAAGATAAACT+TGG + chr3_3:85062729-85062748 None:intergenic 35.0%
! TGGATTTTACTTGCTCAACT+TGG + chr3_3:85063176-85063195 None:intergenic 35.0%
GTAAACTTGATTGGAGTTAG+GGG + chr3_3:85062371-85062390 None:intergenic 35.0%
GGTAAACTTGATTGGAGTTA+GGG + chr3_3:85062372-85062391 None:intergenic 35.0%
AGGTAAACTTGATTGGAGTT+AGG + chr3_3:85062373-85062392 None:intergenic 35.0%
TCCAATCAAGTTTACCTTGA+TGG - chr3_3:85062376-85062395 Msa0479890:CDS 35.0%
TCCATCAAGGTAAACTTGAT+TGG + chr3_3:85062449-85062468 None:intergenic 35.0%
ATCAAGTTTACCTTGATGGA+TGG - chr3_3:85062449-85062468 Msa0479890:CDS 35.0%
TATCTTTCAACCATCCATCA+AGG + chr3_3:85062462-85062481 None:intergenic 35.0%
GAAAGATACCAAGGATCAAA+TGG - chr3_3:85063233-85063252 Msa0479890:CDS 35.0%
! TGGTTTTTCCATTTGATCCT+TGG + chr3_3:85063244-85063263 None:intergenic 35.0%
! GTCTTGTCCAATTTTCTTCA+TGG + chr3_3:85063328-85063347 None:intergenic 35.0%
GAAGAAAATTGGACAAGACA+TGG - chr3_3:85063329-85063348 Msa0479890:CDS 35.0%
AAGACATGGCAGAATCAAAA+GGG - chr3_3:85063343-85063362 Msa0479890:CDS 35.0%
!! GTATGGTCAACTTTTGAAGA+TGG + chr3_3:85063372-85063391 None:intergenic 35.0%
CTAACTTGAATGCCTTTGTA+TGG + chr3_3:85063389-85063408 None:intergenic 35.0%
TGAGAGAGAATAGTTGAAGA+AGG + chr3_3:85063542-85063561 None:intergenic 35.0%
TGTGAATTTGAACCCACAAA+AGG - chr3_3:85063609-85063628 Msa0479890:CDS 35.0%
GTGAATTTGAACCCACAAAA+GGG - chr3_3:85063610-85063629 Msa0479890:CDS 35.0%
TGAATTTGAACCCACAAAAG+GGG - chr3_3:85063611-85063630 Msa0479890:CDS 35.0%
TAATGAAGTAGGACAAGCTT+TGG + chr3_3:85063640-85063659 None:intergenic 35.0%
! TTTGCAGAACTACACCATTT+TGG - chr3_3:85063752-85063771 Msa0479890:CDS 35.0%
!! CACCATTTTGGAAATCTCAA+AGG - chr3_3:85063764-85063783 Msa0479890:CDS 35.0%
AGGATATCTATGCTCCTAAA+TGG - chr3_3:85063784-85063803 Msa0479890:CDS 35.0%
GGATATCTATGCTCCTAAAT+GGG - chr3_3:85063785-85063804 Msa0479890:CDS 35.0%
! TAGTAAAGAGCATAAGGGTA+AGG + chr3_3:85063828-85063847 None:intergenic 35.0%
AGGTCTTCAAAGTTCTTCTA+AGG - chr3_3:85063874-85063893 Msa0479890:CDS 35.0%
GGTCTTCAAAGTTCTTCTAA+GGG - chr3_3:85063875-85063894 Msa0479890:CDS 35.0%
GTCTTCAAAGTTCTTCTAAG+GGG - chr3_3:85063876-85063895 Msa0479890:CDS 35.0%
ATCCAAGTTATCTTGATGGA+TGG - chr3_3:85062173-85062192 Msa0479890:CDS 35.0%
AACCATCCATCAAGATAACT+TGG + chr3_3:85062178-85062197 None:intergenic 35.0%
ACCAATCAAGTTTACCTAGA+TGG - chr3_3:85062238-85062257 Msa0479890:CDS 35.0%
TCCATCTAGGTAAACTTGAT+TGG + chr3_3:85062242-85062261 None:intergenic 35.0%
ATCAAGTTTACCTAGATGGA+TGG - chr3_3:85062242-85062261 Msa0479890:CDS 35.0%
TATCTTTCAACCATCCATCT+AGG + chr3_3:85062255-85062274 None:intergenic 35.0%
TCCAATCAAGTTTACCTAGA+TGG - chr3_3:85062307-85062326 Msa0479890:CDS 35.0%
TCCATCTAGGTAAACTTGAT+TGG + chr3_3:85062242-85062261 None:intergenic 35.0%
ATCAAGTTTACCTAGATGGA+TGG - chr3_3:85062242-85062261 Msa0479890:CDS 35.0%
TTACCTAGATGGATGGTTAA+AGG - chr3_3:85062318-85062337 Msa0479890:CDS 35.0%
TATCCTTTAACCATCCATCT+AGG + chr3_3:85062324-85062343 None:intergenic 35.0%
GTAAACTTGATTGGAGTTAG+GGG + chr3_3:85062371-85062390 None:intergenic 35.0%
GGTAAACTTGATTGGAGTTA+GGG + chr3_3:85062372-85062391 None:intergenic 35.0%
AGGTAAACTTGATTGGAGTT+AGG + chr3_3:85062373-85062392 None:intergenic 35.0%
TCCAATCAAGTTTACCTTGA+CGG - chr3_3:85062376-85062395 Msa0479890:CDS 35.0%
ATCAAGTTTACCTTGATGGA+TGG - chr3_3:85062449-85062468 Msa0479890:CDS 35.0%
TATCTTTCAACCATCCATCA+AGG + chr3_3:85062462-85062481 None:intergenic 35.0%
! TCGATTTTGCTTTCTCATCT+TGG + chr3_3:85062486-85062505 None:intergenic 35.0%
ATAAACTTGGTTGGAGTTTG+GGG + chr3_3:85062509-85062528 None:intergenic 35.0%
GATAAACTTGGTTGGAGTTT+GGG + chr3_3:85062510-85062529 None:intergenic 35.0%
AGATAAACTTGGTTGGAGTT+TGG + chr3_3:85062511-85062530 None:intergenic 35.0%
TCCAACCAAGTTTATCTTGA+CGG - chr3_3:85062514-85062533 Msa0479890:CDS 35.0%
! TGGATTTTTCTTTCTCAGCA+TGG + chr3_3:85062555-85062574 None:intergenic 35.0%
AACTTGATTGTAGTTAGGGT+TGG + chr3_3:85062575-85062594 None:intergenic 35.0%
GAAAGACACCAAAGATCAAA+AGG - chr3_3:85062612-85062631 Msa0479890:CDS 35.0%
! TATCTTTTAACCAGCCATCA+AGG + chr3_3:85062669-85062688 None:intergenic 35.0%
! ATGGCTGGTTAAAAGATAGT+CGG - chr3_3:85062671-85062690 Msa0479890:CDS 35.0%
ATAAACTCGATTGGAGTTGT+GGG + chr3_3:85062716-85062735 None:intergenic 35.0%
TCCAATCGAGTTTATCTTGA+TGG - chr3_3:85062721-85062740 Msa0479890:CDS 35.0%
TCCATCAAGATAAACTCGAT+TGG + chr3_3:85062725-85062744 None:intergenic 35.0%
ATCGAGTTTATCTTGATGGA+TGG - chr3_3:85062725-85062744 Msa0479890:CDS 35.0%
GTAAACTTGATTGGAGTTAG+GGG + chr3_3:85062371-85062390 None:intergenic 35.0%
GGTAAACTTGATTGGAGTTA+GGG + chr3_3:85062372-85062391 None:intergenic 35.0%
AGGTAAACTTGATTGGAGTT+AGG + chr3_3:85062373-85062392 None:intergenic 35.0%
TCCAATCAAGTTTACCTTGA+TGG - chr3_3:85062376-85062395 Msa0479890:CDS 35.0%
AGGTAAACTTGATTGGAGTT+AGG + chr3_3:85062373-85062392 None:intergenic 35.0%
TCCAATCAAGTTTACCTTGA+TGG - chr3_3:85062376-85062395 Msa0479890:CDS 35.0%
TCCATCAAGGTAAACTTGAT+TGG + chr3_3:85062449-85062468 None:intergenic 35.0%
ATCAAGTTTACCTTGATGGA+TGG - chr3_3:85062449-85062468 Msa0479890:CDS 35.0%
TATCTTTCAACCATCCATCA+AGG + chr3_3:85062462-85062481 None:intergenic 35.0%
ATAAACTTGGTTGGAGTTTG+GGG + chr3_3:85062509-85062528 None:intergenic 35.0%
GATAAACTTGGTTGGAGTTT+GGG + chr3_3:85062510-85062529 None:intergenic 35.0%
AGATAAACTTGGTTGGAGTT+TGG + chr3_3:85062511-85062530 None:intergenic 35.0%
TCCAACCAAGTTTATCTTGA+TGG - chr3_3:85062514-85062533 Msa0479890:CDS 35.0%
TCCATCAAGATAAACTTGGT+TGG + chr3_3:85063001-85063020 None:intergenic 35.0%
ACCAAGTTTATCTTGATGGA+TGG - chr3_3:85063001-85063020 Msa0479890:CDS 35.0%
ACCATCCATCAAGATAAACT+TGG + chr3_3:85062729-85062748 None:intergenic 35.0%
! TGGATTTTACTTGCTCAACT+TGG + chr3_3:85063176-85063195 None:intergenic 35.0%
GTAAACTTGATTGGAGTTAG+GGG + chr3_3:85062371-85062390 None:intergenic 35.0%
GGTAAACTTGATTGGAGTTA+GGG + chr3_3:85062372-85062391 None:intergenic 35.0%
AGGTAAACTTGATTGGAGTT+AGG + chr3_3:85062373-85062392 None:intergenic 35.0%
TCCAATCAAGTTTACCTTGA+TGG - chr3_3:85062376-85062395 Msa0479890:CDS 35.0%
TCCATCAAGGTAAACTTGAT+TGG + chr3_3:85062449-85062468 None:intergenic 35.0%
ATCAAGTTTACCTTGATGGA+TGG - chr3_3:85062449-85062468 Msa0479890:CDS 35.0%
TATCTTTCAACCATCCATCA+AGG + chr3_3:85062462-85062481 None:intergenic 35.0%
GAAAGATACCAAGGATCAAA+TGG - chr3_3:85063233-85063252 Msa0479890:CDS 35.0%
! TGGTTTTTCCATTTGATCCT+TGG + chr3_3:85063244-85063263 None:intergenic 35.0%
! GTCTTGTCCAATTTTCTTCA+TGG + chr3_3:85063328-85063347 None:intergenic 35.0%
GAAGAAAATTGGACAAGACA+TGG - chr3_3:85063329-85063348 Msa0479890:CDS 35.0%
AAGACATGGCAGAATCAAAA+GGG - chr3_3:85063343-85063362 Msa0479890:CDS 35.0%
!! GTATGGTCAACTTTTGAAGA+TGG + chr3_3:85063372-85063391 None:intergenic 35.0%
CTAACTTGAATGCCTTTGTA+TGG + chr3_3:85063389-85063408 None:intergenic 35.0%
TGAGAGAGAATAGTTGAAGA+AGG + chr3_3:85063542-85063561 None:intergenic 35.0%
TGTGAATTTGAACCCACAAA+AGG - chr3_3:85063609-85063628 Msa0479890:CDS 35.0%
GTGAATTTGAACCCACAAAA+GGG - chr3_3:85063610-85063629 Msa0479890:CDS 35.0%
TGAATTTGAACCCACAAAAG+GGG - chr3_3:85063611-85063630 Msa0479890:CDS 35.0%
TAATGAAGTAGGACAAGCTT+TGG + chr3_3:85063640-85063659 None:intergenic 35.0%
! TTTGCAGAACTACACCATTT+TGG - chr3_3:85063752-85063771 Msa0479890:CDS 35.0%
!! CACCATTTTGGAAATCTCAA+AGG - chr3_3:85063764-85063783 Msa0479890:CDS 35.0%
AGGATATCTATGCTCCTAAA+TGG - chr3_3:85063784-85063803 Msa0479890:CDS 35.0%
GGATATCTATGCTCCTAAAT+GGG - chr3_3:85063785-85063804 Msa0479890:CDS 35.0%
! TAGTAAAGAGCATAAGGGTA+AGG + chr3_3:85063828-85063847 None:intergenic 35.0%
AGGTCTTCAAAGTTCTTCTA+AGG - chr3_3:85063874-85063893 Msa0479890:CDS 35.0%
GGTCTTCAAAGTTCTTCTAA+GGG - chr3_3:85063875-85063894 Msa0479890:CDS 35.0%
GTCTTCAAAGTTCTTCTAAG+GGG - chr3_3:85063876-85063895 Msa0479890:CDS 35.0%
!! TGTTTTTAAGCCAGCCATCA+AGG + chr3_3:85062123-85062142 None:intergenic 40.0%
!! GGTAAACTTGATTGGTGTTG+TGG + chr3_3:85062234-85062253 None:intergenic 40.0%
GTAAACTTGATTGGAGTCGT+GGG + chr3_3:85062302-85062321 None:intergenic 40.0%
TCCGTCAAGGTAAACTTGAT+TGG + chr3_3:85062380-85062399 None:intergenic 40.0%
ATCAAGTTTACCTTGACGGA+TGG - chr3_3:85062380-85062399 Msa0479890:CDS 40.0%
! TATCTTTTAGCCATCCGTCA+AGG + chr3_3:85062393-85062412 None:intergenic 40.0%
CCAACCAAGTTTATCTTGAC+GGG - chr3_3:85062515-85062534 Msa0479890:CDS 40.0%
! ATCAAGTTTACCTTGATGGC+TGG - chr3_3:85062587-85062606 Msa0479890:CDS 40.0%
AACTATCCACAACCTCAATC+AGG - chr3_3:85062639-85062658 Msa0479890:CDS 40.0%
! TGGCTGGTTAAAAGATAGTC+GGG - chr3_3:85062672-85062691 Msa0479890:CDS 40.0%
GATAAACTCGATTGGAGTTG+TGG + chr3_3:85062717-85062736 None:intergenic 40.0%
GCCATCAAGGTAAACTTGAT+TGG + chr3_3:85062587-85062606 None:intergenic 40.0%
! ATCAAGTTTACCTTGATGGC+TGG - chr3_3:85062587-85062606 Msa0479890:CDS 40.0%
! AAAGATAGCCAAGTTGAGCA+AGG - chr3_3:85062889-85062908 Msa0479890:CDS 40.0%
! TGGATTTTCCTTGCTCAACT+TGG + chr3_3:85062900-85062919 None:intergenic 40.0%
AACTTGATTGGAGTTAGGAG+TGG + chr3_3:85062920-85062939 None:intergenic 40.0%
! GAAAGATAGCCAAGTTGAGA+AGG - chr3_3:85062957-85062976 Msa0479890:CDS 40.0%
TTGATCTTGCCTTCTCAACT+TGG + chr3_3:85062969-85062988 None:intergenic 40.0%
! CTTGATGGATGGTTGAAAGA+TGG - chr3_3:85062184-85062203 Msa0479890:CDS 40.0%
TCGATCTTGCTTTCTCAACT+TGG + chr3_3:85063038-85063057 None:intergenic 40.0%
TCGATCTTGCTTTCTCAACT+TGG + chr3_3:85063038-85063057 None:intergenic 40.0%
! CTTGATGGATGGTTGAAAGA+TGG - chr3_3:85062184-85062203 Msa0479890:CDS 40.0%
TGGATGGTTGAAAGATACCA+AGG - chr3_3:85062258-85062277 Msa0479890:CDS 40.0%
ACCAATACACAACCTCAATC+AGG - chr3_3:85063260-85063279 Msa0479890:CDS 40.0%
AGTCTTTCAACCAACCATCA+AGG + chr3_3:85063290-85063309 None:intergenic 40.0%
GCGAACTCCATGAAGAAAAT+TGG - chr3_3:85063318-85063337 Msa0479890:CDS 40.0%
CAAGACATGGCAGAATCAAA+AGG - chr3_3:85063342-85063361 Msa0479890:CDS 40.0%
GAGAATAGTTGAAGAAGGCT+TGG + chr3_3:85063537-85063556 None:intergenic 40.0%
TCTTTCATGTCTTCACCTTG+GGG + chr3_3:85063576-85063595 None:intergenic 40.0%
GTCTTTCATGTCTTCACCTT+GGG + chr3_3:85063577-85063596 None:intergenic 40.0%
TGTCTTTCATGTCTTCACCT+TGG + chr3_3:85063578-85063597 None:intergenic 40.0%
AGCATGGACTCTAATGAAGT+AGG + chr3_3:85063651-85063670 None:intergenic 40.0%
! GGCAGTAGTAAAGAGCATAA+GGG + chr3_3:85063833-85063852 None:intergenic 40.0%
! TGGCAGTAGTAAAGAGCATA+AGG + chr3_3:85063834-85063853 None:intergenic 40.0%
! GTTCTTCTAAGGGGTCAATA+TGG - chr3_3:85063885-85063904 Msa0479890:CDS 40.0%
GGGTCAATATGGAGACATAA+TGG - chr3_3:85063896-85063915 Msa0479890:CDS 40.0%
!! TGGAGACATAATGGATGCTT+TGG - chr3_3:85063905-85063924 Msa0479890:CDS 40.0%
!! GGAGACATAATGGATGCTTT+GGG - chr3_3:85063906-85063925 Msa0479890:CDS 40.0%
AACTACTTGGAATGAAGCCT+GGG - chr3_3:85063979-85063998 Msa0479890:CDS 40.0%
!! TGTTTTTAAGCCAGCCATCA+AGG + chr3_3:85062123-85062142 None:intergenic 40.0%
!! GGTAAACTTGATTGGTGTTG+TGG + chr3_3:85062234-85062253 None:intergenic 40.0%
GTAAACTTGATTGGAGTCGT+GGG + chr3_3:85062302-85062321 None:intergenic 40.0%
TCCGTCAAGGTAAACTTGAT+TGG + chr3_3:85062380-85062399 None:intergenic 40.0%
ATCAAGTTTACCTTGACGGA+TGG - chr3_3:85062380-85062399 Msa0479890:CDS 40.0%
! TATCTTTTAGCCATCCGTCA+AGG + chr3_3:85062393-85062412 None:intergenic 40.0%
CCAACCAAGTTTATCTTGAC+GGG - chr3_3:85062515-85062534 Msa0479890:CDS 40.0%
! ATCAAGTTTACCTTGATGGC+TGG - chr3_3:85062587-85062606 Msa0479890:CDS 40.0%
AACTATCCACAACCTCAATC+AGG - chr3_3:85062639-85062658 Msa0479890:CDS 40.0%
! TGGCTGGTTAAAAGATAGTC+GGG - chr3_3:85062672-85062691 Msa0479890:CDS 40.0%
GATAAACTCGATTGGAGTTG+TGG + chr3_3:85062717-85062736 None:intergenic 40.0%
GCCATCAAGGTAAACTTGAT+TGG + chr3_3:85062587-85062606 None:intergenic 40.0%
! ATCAAGTTTACCTTGATGGC+TGG - chr3_3:85062587-85062606 Msa0479890:CDS 40.0%
! AAAGATAGCCAAGTTGAGCA+AGG - chr3_3:85062889-85062908 Msa0479890:CDS 40.0%
! TGGATTTTCCTTGCTCAACT+TGG + chr3_3:85062900-85062919 None:intergenic 40.0%
AACTTGATTGGAGTTAGGAG+TGG + chr3_3:85062920-85062939 None:intergenic 40.0%
! GAAAGATAGCCAAGTTGAGA+AGG - chr3_3:85062957-85062976 Msa0479890:CDS 40.0%
TTGATCTTGCCTTCTCAACT+TGG + chr3_3:85062969-85062988 None:intergenic 40.0%
! CTTGATGGATGGTTGAAAGA+TGG - chr3_3:85062184-85062203 Msa0479890:CDS 40.0%
TCGATCTTGCTTTCTCAACT+TGG + chr3_3:85063038-85063057 None:intergenic 40.0%
TCGATCTTGCTTTCTCAACT+TGG + chr3_3:85063038-85063057 None:intergenic 40.0%
! CTTGATGGATGGTTGAAAGA+TGG - chr3_3:85062184-85062203 Msa0479890:CDS 40.0%
TGGATGGTTGAAAGATACCA+AGG - chr3_3:85062258-85062277 Msa0479890:CDS 40.0%
ACCAATACACAACCTCAATC+AGG - chr3_3:85063260-85063279 Msa0479890:CDS 40.0%
AGTCTTTCAACCAACCATCA+AGG + chr3_3:85063290-85063309 None:intergenic 40.0%
GCGAACTCCATGAAGAAAAT+TGG - chr3_3:85063318-85063337 Msa0479890:CDS 40.0%
CAAGACATGGCAGAATCAAA+AGG - chr3_3:85063342-85063361 Msa0479890:CDS 40.0%
GAGAATAGTTGAAGAAGGCT+TGG + chr3_3:85063537-85063556 None:intergenic 40.0%
TCTTTCATGTCTTCACCTTG+GGG + chr3_3:85063576-85063595 None:intergenic 40.0%
GTCTTTCATGTCTTCACCTT+GGG + chr3_3:85063577-85063596 None:intergenic 40.0%
TGTCTTTCATGTCTTCACCT+TGG + chr3_3:85063578-85063597 None:intergenic 40.0%
AGCATGGACTCTAATGAAGT+AGG + chr3_3:85063651-85063670 None:intergenic 40.0%
! GGCAGTAGTAAAGAGCATAA+GGG + chr3_3:85063833-85063852 None:intergenic 40.0%
! TGGCAGTAGTAAAGAGCATA+AGG + chr3_3:85063834-85063853 None:intergenic 40.0%
! GTTCTTCTAAGGGGTCAATA+TGG - chr3_3:85063885-85063904 Msa0479890:CDS 40.0%
GGGTCAATATGGAGACATAA+TGG - chr3_3:85063896-85063915 Msa0479890:CDS 40.0%
!! TGGAGACATAATGGATGCTT+TGG - chr3_3:85063905-85063924 Msa0479890:CDS 40.0%
!! GGAGACATAATGGATGCTTT+GGG - chr3_3:85063906-85063925 Msa0479890:CDS 40.0%
AACTACTTGGAATGAAGCCT+GGG - chr3_3:85063979-85063998 Msa0479890:CDS 40.0%
GTTGATCAGCCTTACCTTGA+TGG - chr3_3:85062106-85062125 Msa0479890:CDS 45.0%
TTAAGCCAGCCATCAAGGTA+AGG + chr3_3:85062118-85062137 None:intergenic 45.0%
GGTAAACTTGATTGGAGTCG+TGG + chr3_3:85062303-85062322 None:intergenic 45.0%
AACTTGATTGGAGTTAGGGG+TGG + chr3_3:85062368-85062387 None:intergenic 45.0%
CCCGTCAAGATAAACTTGGT+TGG + chr3_3:85062518-85062537 None:intergenic 45.0%
ACCAAGTTTATCTTGACGGG+TGG - chr3_3:85062518-85062537 Msa0479890:CDS 45.0%
ACCACCCGTCAAGATAAACT+TGG + chr3_3:85062522-85062541 None:intergenic 45.0%
TGTCTTTCAACCAGCCATCA+AGG + chr3_3:85062600-85062619 None:intergenic 45.0%
CATCAAGGTAAGCCTGATTG+AGG + chr3_3:85062654-85062673 None:intergenic 45.0%
CTCAATCAGGCTTACCTTGA+TGG - chr3_3:85062652-85062671 Msa0479890:CDS 45.0%
AACTTGATTGGAGTTAGGGG+TGG + chr3_3:85062368-85062387 None:intergenic 45.0%
AACTTGATTGGAGTTAGGGG+TGG + chr3_3:85062368-85062387 None:intergenic 45.0%
GCCTGATTGAGGTTGTGTAT+TGG + chr3_3:85063264-85063283 None:intergenic 45.0%
CATCAAGGTAAGCCTGATTG+AGG + chr3_3:85062654-85062673 None:intergenic 45.0%
CTCAATCAGGCTTACCTTGA+TGG - chr3_3:85062652-85062671 Msa0479890:CDS 45.0%
! ATCAGGCTTACCTTGATGGT+TGG - chr3_3:85063277-85063296 Msa0479890:CDS 45.0%
ACTAGCTATCCCACAACATC+AGG - chr3_3:85063723-85063742 Msa0479890:CDS 45.0%
AAACGTGCACCTGATGTTGT+GGG + chr3_3:85063735-85063754 None:intergenic 45.0%
TACTGCCACTACCTAGACAT+AGG - chr3_3:85063846-85063865 Msa0479890:CDS 45.0%
ACTGCCACTACCTAGACATA+GGG - chr3_3:85063847-85063866 Msa0479890:CDS 45.0%
TACTCCCTATGTCTAGGTAG+TGG + chr3_3:85063854-85063873 None:intergenic 45.0%
CTACCTAGACATAGGGAGTA+AGG - chr3_3:85063854-85063873 Msa0479890:CDS 45.0%
AGACCTTACTCCCTATGTCT+AGG + chr3_3:85063860-85063879 None:intergenic 45.0%
GATTCATGTCAGACGTGTCT+AGG + chr3_3:85063941-85063960 None:intergenic 45.0%
CAACTACTTGGAATGAAGCC+TGG - chr3_3:85063978-85063997 Msa0479890:CDS 45.0%
ACTACTTGGAATGAAGCCTG+GGG - chr3_3:85063980-85063999 Msa0479890:CDS 45.0%
ACAGGGAAGAAATGGCACAT+AGG + chr3_3:85064011-85064030 None:intergenic 45.0%
CGTGCTTTACAGGGAAGAAA+TGG + chr3_3:85064019-85064038 None:intergenic 45.0%
TCCCTGTAAAGCACGTTCTA+TGG - chr3_3:85064024-85064043 Msa0479890:CDS 45.0%
CCCATAGAACGTGCTTTACA+GGG + chr3_3:85064028-85064047 None:intergenic 45.0%
CCCTGTAAAGCACGTTCTAT+GGG - chr3_3:85064025-85064044 Msa0479890:CDS 45.0%
GTTGATCAGCCTTACCTTGA+TGG - chr3_3:85062106-85062125 Msa0479890:CDS 45.0%
TTAAGCCAGCCATCAAGGTA+AGG + chr3_3:85062118-85062137 None:intergenic 45.0%
GGTAAACTTGATTGGAGTCG+TGG + chr3_3:85062303-85062322 None:intergenic 45.0%
AACTTGATTGGAGTTAGGGG+TGG + chr3_3:85062368-85062387 None:intergenic 45.0%
CCCGTCAAGATAAACTTGGT+TGG + chr3_3:85062518-85062537 None:intergenic 45.0%
ACCAAGTTTATCTTGACGGG+TGG - chr3_3:85062518-85062537 Msa0479890:CDS 45.0%
ACCACCCGTCAAGATAAACT+TGG + chr3_3:85062522-85062541 None:intergenic 45.0%
TGTCTTTCAACCAGCCATCA+AGG + chr3_3:85062600-85062619 None:intergenic 45.0%
CATCAAGGTAAGCCTGATTG+AGG + chr3_3:85062654-85062673 None:intergenic 45.0%
CTCAATCAGGCTTACCTTGA+TGG - chr3_3:85062652-85062671 Msa0479890:CDS 45.0%
AACTTGATTGGAGTTAGGGG+TGG + chr3_3:85062368-85062387 None:intergenic 45.0%
AACTTGATTGGAGTTAGGGG+TGG + chr3_3:85062368-85062387 None:intergenic 45.0%
GCCTGATTGAGGTTGTGTAT+TGG + chr3_3:85063264-85063283 None:intergenic 45.0%
CATCAAGGTAAGCCTGATTG+AGG + chr3_3:85062654-85062673 None:intergenic 45.0%
CTCAATCAGGCTTACCTTGA+TGG - chr3_3:85062652-85062671 Msa0479890:CDS 45.0%
! ATCAGGCTTACCTTGATGGT+TGG - chr3_3:85063277-85063296 Msa0479890:CDS 45.0%
ACTAGCTATCCCACAACATC+AGG - chr3_3:85063723-85063742 Msa0479890:CDS 45.0%
AAACGTGCACCTGATGTTGT+GGG + chr3_3:85063735-85063754 None:intergenic 45.0%
TACTGCCACTACCTAGACAT+AGG - chr3_3:85063846-85063865 Msa0479890:CDS 45.0%
ACTGCCACTACCTAGACATA+GGG - chr3_3:85063847-85063866 Msa0479890:CDS 45.0%
TACTCCCTATGTCTAGGTAG+TGG + chr3_3:85063854-85063873 None:intergenic 45.0%
CTACCTAGACATAGGGAGTA+AGG - chr3_3:85063854-85063873 Msa0479890:CDS 45.0%
AGACCTTACTCCCTATGTCT+AGG + chr3_3:85063860-85063879 None:intergenic 45.0%
GATTCATGTCAGACGTGTCT+AGG + chr3_3:85063941-85063960 None:intergenic 45.0%
CAACTACTTGGAATGAAGCC+TGG - chr3_3:85063978-85063997 Msa0479890:CDS 45.0%
ACTACTTGGAATGAAGCCTG+GGG - chr3_3:85063980-85063999 Msa0479890:CDS 45.0%
ACAGGGAAGAAATGGCACAT+AGG + chr3_3:85064011-85064030 None:intergenic 45.0%
CGTGCTTTACAGGGAAGAAA+TGG + chr3_3:85064019-85064038 None:intergenic 45.0%
TCCCTGTAAAGCACGTTCTA+TGG - chr3_3:85064024-85064043 Msa0479890:CDS 45.0%
CCCATAGAACGTGCTTTACA+GGG + chr3_3:85064028-85064047 None:intergenic 45.0%
CCCTGTAAAGCACGTTCTAT+GGG - chr3_3:85064025-85064044 Msa0479890:CDS 45.0%
! ATCAGCCTTACCTTGATGGC+TGG - chr3_3:85062110-85062129 Msa0479890:CDS 50.0%
GGTAAGCCTGATTGAGGTTG+TGG + chr3_3:85062648-85062667 None:intergenic 50.0%
! ATCAGGCTTACCTTGATGGC+TGG - chr3_3:85062656-85062675 Msa0479890:CDS 50.0%
ACTCGATTGGAGTTGTGGGT+GGG + chr3_3:85062712-85062731 None:intergenic 50.0%
AACTCGATTGGAGTTGTGGG+TGG + chr3_3:85062713-85062732 None:intergenic 50.0%
CATCTTTCAGCCAGCCATCA+AGG + chr3_3:85062807-85062826 None:intergenic 50.0%
! GGTAGTTGCGACTTGGAGAA+AGG + chr3_3:85063516-85063535 None:intergenic 50.0%
! AAGGCTTGGTAGTTGCGACT+TGG + chr3_3:85063523-85063542 None:intergenic 50.0%
CTCACAAACGATTCTCCCCA+AGG - chr3_3:85063558-85063577 Msa0479890:CDS 50.0%
! GCTTTGGTCTCCCCTTTTGT+GGG + chr3_3:85063624-85063643 None:intergenic 50.0%
!! AGCTTTGGTCTCCCCTTTTG+TGG + chr3_3:85063625-85063644 None:intergenic 50.0%
CAAACGTGCACCTGATGTTG+TGG + chr3_3:85063736-85063755 None:intergenic 50.0%
GGGTGACAAGCTACCCATTT+AGG + chr3_3:85063801-85063820 None:intergenic 50.0%
! AATGGGTAGCTTGTCACCCT+AGG - chr3_3:85063802-85063821 Msa0479890:CDS 50.0%
GAGCATAAGGGTAAGGCCTA+GGG + chr3_3:85063821-85063840 None:intergenic 50.0%
AGAGCATAAGGGTAAGGCCT+AGG + chr3_3:85063822-85063841 None:intergenic 50.0%
TCATGTCAGACGTGTCTAGG+TGG + chr3_3:85063938-85063957 None:intergenic 50.0%
GCCCATAGAACGTGCTTTAC+AGG + chr3_3:85064029-85064048 None:intergenic 50.0%
! ATCAGCCTTACCTTGATGGC+TGG - chr3_3:85062110-85062129 Msa0479890:CDS 50.0%
GGTAAGCCTGATTGAGGTTG+TGG + chr3_3:85062648-85062667 None:intergenic 50.0%
! ATCAGGCTTACCTTGATGGC+TGG - chr3_3:85062656-85062675 Msa0479890:CDS 50.0%
ACTCGATTGGAGTTGTGGGT+GGG + chr3_3:85062712-85062731 None:intergenic 50.0%
AACTCGATTGGAGTTGTGGG+TGG + chr3_3:85062713-85062732 None:intergenic 50.0%
CATCTTTCAGCCAGCCATCA+AGG + chr3_3:85062807-85062826 None:intergenic 50.0%
! GGTAGTTGCGACTTGGAGAA+AGG + chr3_3:85063516-85063535 None:intergenic 50.0%
! AAGGCTTGGTAGTTGCGACT+TGG + chr3_3:85063523-85063542 None:intergenic 50.0%
CTCACAAACGATTCTCCCCA+AGG - chr3_3:85063558-85063577 Msa0479890:CDS 50.0%
! GCTTTGGTCTCCCCTTTTGT+GGG + chr3_3:85063624-85063643 None:intergenic 50.0%
!! AGCTTTGGTCTCCCCTTTTG+TGG + chr3_3:85063625-85063644 None:intergenic 50.0%
CAAACGTGCACCTGATGTTG+TGG + chr3_3:85063736-85063755 None:intergenic 50.0%
GGGTGACAAGCTACCCATTT+AGG + chr3_3:85063801-85063820 None:intergenic 50.0%
! AATGGGTAGCTTGTCACCCT+AGG - chr3_3:85063802-85063821 Msa0479890:CDS 50.0%
GAGCATAAGGGTAAGGCCTA+GGG + chr3_3:85063821-85063840 None:intergenic 50.0%
AGAGCATAAGGGTAAGGCCT+AGG + chr3_3:85063822-85063841 None:intergenic 50.0%
TCATGTCAGACGTGTCTAGG+TGG + chr3_3:85063938-85063957 None:intergenic 50.0%
GCCCATAGAACGTGCTTTAC+AGG + chr3_3:85064029-85064048 None:intergenic 50.0%
TGGCACATAGGAGCTTCCCC+AGG + chr3_3:85063999-85064018 None:intergenic 60.0%
TGGCACATAGGAGCTTCCCC+AGG + chr3_3:85063999-85064018 None:intergenic 60.0%
ATGGGCACCACTCCCACCAG+AGG - chr3_3:85064043-85064062 Msa0479890:CDS 65.0%
! TTGGTGGCCTCTGGTGGGAG+TGG + chr3_3:85064053-85064072 None:intergenic 65.0%
ATGGGCACCACTCCCACCAG+AGG - chr3_3:85064043-85064062 Msa0479890:CDS 65.0%
! TTGGTGGCCTCTGGTGGGAG+TGG + chr3_3:85064053-85064072 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 85062070 85064076 85062070 ID=Msa0479890;Name=Msa0479890
chr3_3 mRNA 85062070 85064076 85062070 ID=Msa0479890-mRNA-1;Parent=Msa0479890;Name=Msa0479890-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|-1|0|1|-1|1|1|0|668
chr3_3 exon 85062070 85064076 85062070 ID=Msa0479890-mRNA-1:exon:24276;Parent=Msa0479890-mRNA-1
chr3_3 CDS 85062070 85064076 85062070 ID=Msa0479890-mRNA-1:cds;Parent=Msa0479890-mRNA-1
Gene Sequence

>Msa0479890

ATGAAGCTTCAGCACGAGAATGTAGAAGAAAAACAAGTTGATCAGCCTTACCTTGATGGCTGGCTTAAAAACAGTCCACTGAAGAACAAAAAACTAAACTCTAATCCAAGTTATCTTGATGGATGGTTGAAAGATGCTCCCGAAGAAAACAAAAAAGCTATCCACAACACCAATCAAGTTTACCTAGATGGATGGTTGAAAGATACCAAGAATCAAAAGGAAAAGACTACCCACGACTCCAATCAAGTTTACCTAGATGGATGGTTAAAGGATACCCAAGTTCAAAAAACAAAATCCACCCCTAACTCCAATCAAGTTTACCTTGACGGATGGCTAAAAGATACCCAAGTTGAGAAAGCAAAATTCATCCCTAACTCTAATCAAGTTTACCTTGATGGATGGTTGAAAGATAGCCAAGATGAGAAAGCAAAATCGACCCCAAACTCCAACCAAGTTTATCTTGACGGGTGGTTGAAAGATAGCCATGCTGAGAAAGAAAAATCCAACCCTAACTACAATCAAGTTTACCTTGATGGCTGGTTGAAAGACACCAAAGATCAAAAGGAAAAAACTATCCACAACCTCAATCAGGCTTACCTTGATGGCTGGTTAAAAGATAGTCGGGTTGAGAGAGCAAAACCCACCCACAACTCCAATCGAGTTTATCTTGATGGATGGTTGAAAGATAGCCATGTTGAGAAAGAAAAATCCACCCCTAACTCCAATCAAGTTTACCTTGATGGCTGGCTGAAAGATGCCCAACTTGAGAAAGCAAAATCAACCCCAAACTTCAATCAAGTTTATCTTGATGGATGGTTGAAAGATAGCCAAGTTGAGCAAGGAAAATCCACTCCTAACTCCAATCAAGTTTACCTTGATGGATGGTTGAAAGATAGCCAAGTTGAGAAGGCAAGATCAACCCCAAACTCCAACCAAGTTTATCTTGATGGATGGTTGAAAGATGGCCAAGTTGAGAAAGCAAGATCGACCCCAAACTCCAATCAAGTTTATCTTGATGGATGGTTGAAAGATAGCCAAGTTGAGAAAGCAAGATCGACCCCAAACTCTAATCAAGTTTATCTTGATGGATGGTTGAAAGATGGCCAAGTTGAGCAAGTAAAATCCACCCCTAACTCCAATCAAGTTTACCTTGATGGATGGTTGAAAGATACCAAGGATCAAATGGAAAAACCAATACACAACCTCAATCAGGCTTACCTTGATGGTTGGTTGAAAGACTCGCATGCAGCGAACTCCATGAAGAAAATTGGACAAGACATGGCAGAATCAAAAGGGAAACCATCTTCAAAAGTTGACCATACAAAGGCATTCAAGTTAGCTTTTTTCACTATGGATGATCTTTATGTAGGGAACGTAATGACACTGCAATTTCCTATCAGAGAATATGCTAACTTCTTGCCAAAAAAAGTAGCTGACTACATTCCTTTCTCCAAGTCGCAACTACCAAGCCTTCTTCAACTATTCTCTCTCACAAACGATTCTCCCCAAGGTGAAGACATGAAAGACATAATTGATCAATGTGAATTTGAACCCACAAAAGGGGAGACCAAAGCTTGTCCTACTTCATTAGAGTCCATGCTTGAATTTGTTCATAGTGTTCTTGGTACTGAGACCAAATATAACATTCACACAACTAGCTATCCCACAACATCAGGTGCACGTTTGCAGAACTACACCATTTTGGAAATCTCAAAGGATATCTATGCTCCTAAATGGGTAGCTTGTCACCCTAGGCCTTACCCTTATGCTCTTTACTACTGCCACTACCTAGACATAGGGAGTAAGGTCTTCAAAGTTCTTCTAAGGGGTCAATATGGAGACATAATGGATGCTTTGGGCATTTGCCACCTAGACACGTCTGACATGAATCCTAATCATTTTATATTTCAACTACTTGGAATGAAGCCTGGGGAAGCTCCTATGTGCCATTTCTTCCCTGTAAAGCACGTTCTATGGGCACCACTCCCACCAGAGGCCACCAACTGA
Protein sequence

>Msa0479890

MKLQHENVEEKQVDQPYLDGWLKNSPLKNKKLNSNPSYLDGWLKDAPEENKKAIHNTNQVYLDGWLKDTKNQKEKTTHDSNQVYLDGWLKDTQVQKTKSTPNSNQVYLDGWLKDTQVEKAKFIPNSNQVYLDGWLKDSQDEKAKSTPNSNQVYLDGWLKDSHAEKEKSNPNYNQVYLDGWLKDTKDQKEKTIHNLNQAYLDGWLKDSRVERAKPTHNSNRVYLDGWLKDSHVEKEKSTPNSNQVYLDGWLKDAQLEKAKSTPNFNQVYLDGWLKDSQVEQGKSTPNSNQVYLDGWLKDSQVEKARSTPNSNQVYLDGWLKDGQVEKARSTPNSNQVYLDGWLKDSQVEKARSTPNSNQVYLDGWLKDGQVEQVKSTPNSNQVYLDGWLKDTKDQMEKPIHNLNQAYLDGWLKDSHAANSMKKIGQDMAESKGKPSSKVDHTKAFKLAFFTMDDLYVGNVMTLQFPIREYANFLPKKVADYIPFSKSQLPSLLQLFSLTNDSPQGEDMKDIIDQCEFEPTKGETKACPTSLESMLEFVHSVLGTETKYNIHTTSYPTTSGARLQNYTILEISKDIYAPKWVACHPRPYPYALYYCHYLDIGSKVFKVLLRGQYGDIMDALGICHLDTSDMNPNHFIFQLLGMKPGEAPMCHFFPVKHVLWAPLPPEATN*