AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0523600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0523600 MtrunA17_Chr3g0144411 85.010 507 63 2 173 668 41 545 0.0 896
Msa0523600 MtrunA17_Chr3g0144411 76.981 265 50 1 1 254 28 292 9.50e-133 401
Msa0523600 MtrunA17_Chr3g0144411 60.123 163 52 2 14 163 131 293 1.24e-51 187
Msa0523600 MtrunA17_Chr3g0144391 75.356 491 119 2 179 668 23 512 0.0 766
Msa0523600 MtrunA17_Chr3g0144391 67.647 238 75 1 1 236 28 265 9.12e-106 330
Msa0523600 MtrunA17_Chr3g0144391 63.801 221 80 0 127 347 41 261 3.03e-88 285
Msa0523600 MtrunA17_Chr3g0144391 59.414 239 96 1 87 324 23 261 3.45e-86 279
Msa0523600 MtrunA17_Chr3g0144391 57.741 239 100 1 64 301 23 261 2.67e-82 269
Msa0523600 MtrunA17_Chr3g0144391 59.649 114 40 2 14 123 156 267 7.12e-32 130
Msa0523600 MtrunA17_Chr4g0034731 41.587 416 183 12 286 662 39 433 1.86e-94 298
Msa0523600 MtrunA17_Chr4g0034691 32.630 711 361 26 8 664 65 711 2.89e-93 304
Msa0523600 MtrunA17_Chr4g0034451 56.000 225 97 2 439 661 302 526 3.24e-92 296
Msa0523600 MtrunA17_Chr4g0034721 35.603 514 277 15 153 664 118 579 1.43e-91 295
Msa0523600 MtrunA17_Chr6g0485051 57.073 205 85 3 460 661 1 205 2.11e-70 227
Msa0523600 MtrunA17_Chr3g0144451 47.489 219 112 1 446 661 57 275 3.86e-69 227
Msa0523600 MtrunA17_Chr4g0034821 46.575 219 114 1 446 661 73 291 4.02e-66 219
Msa0523600 MtrunA17_Chr3g0138231 46.119 219 115 1 446 661 48 266 7.08e-66 218
Msa0523600 MtrunA17_Chr3g0144421 42.466 219 122 2 447 662 86 303 3.51e-60 204
Msa0523600 MtrunA17_Chr1g0147271 41.284 218 118 5 448 660 171 383 8.34e-46 167
Msa0523600 MtrunA17_Chr1g0147321 40.000 215 122 4 448 660 27 236 2.55e-45 162
Msa0523600 MtrunA17_Chr1g0147291 39.013 223 129 4 440 660 48 265 1.05e-44 160
Msa0523600 MtrunA17_Chr1g0147261 39.720 214 122 4 448 659 89 297 7.27e-44 159
Msa0523600 MtrunA17_Chr1g0147301 38.938 226 129 5 440 660 62 283 3.71e-43 157
Msa0523600 MtrunA17_Chr1g0147331 39.070 215 123 4 448 659 113 322 1.36e-42 156
Msa0523600 MtrunA17_Chr1g0146631 39.070 215 123 4 448 659 113 322 2.02e-42 156
Msa0523600 MtrunA17_Chr1g0147251 38.208 212 125 3 448 659 35 240 2.06e-41 150
Msa0523600 MtrunA17_Chr3g0139431 40.183 219 122 6 448 661 107 321 7.86e-41 151
Msa0523600 MtrunA17_Chr1g0147311 38.356 219 124 5 448 660 141 354 2.59e-40 151
Msa0523600 MtrunA17_Chr1g0147241 38.710 217 125 4 446 659 99 310 3.62e-38 144
Msa0523600 MtrunA17_Chr4g0034051 60.976 82 30 2 586 665 2 83 3.27e-27 105
Msa0523600 MtrunA17_Chr5g0413591 33.178 214 121 8 448 650 415 617 2.40e-25 111
Msa0523600 MtrunA17_Chr8g0365401 32.301 226 125 7 448 659 412 623 1.46e-24 108
Msa0523600 MtrunA17_Chr3g0117791 32.719 217 118 6 448 650 413 615 3.84e-24 107
Msa0523600 MtrunA17_Chr8g0365361 32.432 222 112 7 448 650 181 383 4.31e-24 105
Msa0523600 MtrunA17_Chr8g0365381 31.532 222 134 6 448 660 429 641 5.09e-24 107
Msa0523600 MtrunA17_Chr4g0034711 56.000 75 33 0 434 508 20 94 3.30e-22 92.0
Msa0523600 MtrunA17_Chr8g0355871 32.110 218 122 7 448 663 31 224 2.34e-21 93.6
Msa0523600 MtrunA17_Chr4g0076231 35.256 156 96 4 507 660 5 157 1.11e-20 89.4
Msa0523600 MtrunA17_Chr8g0355321 36.478 159 89 6 504 661 155 302 2.22e-19 89.4
Msa0523600 MtrunA17_Chr5g0412951 27.979 193 122 5 474 659 25 207 9.94e-19 85.5
Msa0523600 MtrunA17_Chr5g0412991 29.348 184 113 5 474 650 226 399 1.76e-18 88.6
Msa0523600 MtrunA17_Chr5g0412991 28.249 177 110 5 474 643 18 184 2.39e-15 79.0
Msa0523600 MtrunA17_Chr5g0412981 29.348 184 113 5 474 650 226 399 1.86e-18 88.2
Msa0523600 MtrunA17_Chr5g0412981 28.249 177 110 5 474 643 18 184 3.09e-15 78.6
Msa0523600 MtrunA17_Chr8g0355331 34.177 158 92 5 505 661 275 421 2.80e-18 88.2
Msa0523600 MtrunA17_Chr8g0355841 34.667 150 88 5 512 661 370 509 2.05e-17 85.9
Msa0523600 MtrunA17_Chr8g0355311 32.432 148 90 5 514 661 53 190 2.61e-17 80.9
Msa0523600 MtrunA17_Chr8g0355861 30.233 215 128 7 447 661 68 260 3.49e-17 82.4
Msa0523600 MtrunA17_Chr4g0034021 64.151 53 19 0 434 486 204 256 2.45e-15 76.6
Msa0523600 MtrunA17_Chr8g0355831 33.333 141 84 4 521 661 221 351 7.39e-15 76.6
Msa0523600 MtrunA17_Chr1g0168781 32.000 150 93 4 512 661 119 259 8.89e-14 72.0
Msa0523600 MtrunA17_Chr8g0371951 38.667 75 43 2 578 650 14 87 3.30e-11 60.1
Msa0523600 MtrunA17_Chr5g0413021 37.037 81 49 2 580 659 48 127 4.85e-11 60.8
Msa0523600 MtrunA17_Chr4g0034031 42.857 56 32 0 507 562 1 56 6.50e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0523600 AT1G49320.1 33.942 274 165 6 399 660 9 278 2.42e-44 160
Msa0523600 AT5G25610.1 38.073 218 125 6 448 659 176 389 6.44e-39 148
Msa0523600 AT1G70370.2 32.727 220 134 6 448 660 411 623 2.37e-25 111
Msa0523600 AT1G70370.1 32.727 220 134 6 448 660 411 623 2.37e-25 111
Msa0523600 AT1G23760.1 33.166 199 113 5 471 660 432 619 3.52e-24 108
Msa0523600 AT1G60390.1 29.798 198 117 5 472 659 435 620 2.20e-21 99.4

Find 191 sgRNAs with CRISPR-Local

Find 428 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAATCAAGTTTATCTTGA+TGG 0.211968 3_4:+77035623 Msa0523600:CDS
AGGATATCTATGCTCCTAAA+TGG 0.228868 3_4:+77036548 Msa0523600:CDS
GAATTTGTTCATAGTGTTCT+TGG 0.231624 3_4:+77036436 Msa0523600:CDS
TTTGCAGAACTACACCATTT+TGG 0.234201 3_4:+77036516 Msa0523600:CDS
TCCCTGTAAAGCACGTTCTA+TGG 0.238519 3_4:+77036788 Msa0523600:CDS
GTCTTTCATGTCTTCACCTT+GGG 0.240047 3_4:-77036338 None:intergenic
TCCAATCAAGTTTATCTTGA+TGG 0.240985 3_4:+77035830 Msa0523600:CDS
GATAAACTTGATTGAAGTTT+GGG 0.247881 3_4:-77035616 None:intergenic
AGGTCTTCAAAGTTCTTCTA+AGG 0.253474 3_4:+77036638 Msa0523600:CDS
ATCCTTTGAGATTTCCAAAA+TGG 0.256902 3_4:-77036530 None:intergenic
GATAAACTTGATTGGAGTTT+GGG 0.256939 3_4:-77035823 None:intergenic
TCTAATCAAGTTTATCTTGA+TGG 0.268313 3_4:+77035899 Msa0523600:CDS
GATAAACTTGATTAGAGTTT+GGG 0.274295 3_4:-77035892 None:intergenic
GATAAACTTGGTTGGAGTTT+GGG 0.274888 3_4:-77035271 None:intergenic
GATAAACTTGGTTGGAGTTT+GGG 0.274888 3_4:-77035754 None:intergenic
TCCAATCGAGTTTATCTTGA+TGG 0.276513 3_4:+77035485 Msa0523600:CDS
GGGTGACAAGCTACCCATTT+AGG 0.279438 3_4:-77036562 None:intergenic
TCCAACCAAGTTTATCTTGA+TGG 0.283723 3_4:+77035761 Msa0523600:CDS
TCCAATCAAGTTTACCTTGA+TGG 0.284115 3_4:+77035692 Msa0523600:CDS
TCCAATCAAGTTTACCTTGA+TGG 0.284115 3_4:+77035968 Msa0523600:CDS
GCGAACTCCATGAAGAAAAT+TGG 0.289076 3_4:+77036082 Msa0523600:CDS
GCCCATAGAACGTGCTTTAC+AGG 0.291191 3_4:-77036790 None:intergenic
TACAATCAAGTTTACCTTGA+TGG 0.294768 3_4:+77035347 Msa0523600:CDS
TCTAATCAAGTTTACCTTGA+TGG 0.295765 3_4:+77035209 Msa0523600:CDS
AGATAAACTTGATTGAAGTT+TGG 0.296038 3_4:-77035617 None:intergenic
TCCAATCAAGTTTACCTTGA+TGG 0.298027 3_4:+77035554 Msa0523600:CDS
AGATAAACTTGGTTGGAGTT+TGG 0.299383 3_4:-77035755 None:intergenic
CTCAATCAGGCTTACCTTGA+TGG 0.299708 3_4:+77036037 Msa0523600:CDS
AGATAAACTTGATTGGAGTT+TGG 0.300825 3_4:-77035824 None:intergenic
GTTGATCAGCCTTACCTTGA+TGG 0.301941 3_4:+77034870 Msa0523600:CDS
AGATAAACTTGATTAGAGTT+TGG 0.304429 3_4:-77035893 None:intergenic
AGATAAACTTGGTTGGAGTT+TGG 0.312080 3_4:-77035272 None:intergenic
AGTTGTGTGAATGTTATATT+TGG 0.312223 3_4:-77036467 None:intergenic
TTACCTAGATGGATGGTTAA+AGG 0.317562 3_4:+77035082 Msa0523600:CDS
AGGTAAACTTGATTGGAGTT+AGG 0.321370 3_4:-77035548 None:intergenic
AGGTAAACTTGATTGGAGTT+AGG 0.321370 3_4:-77035962 None:intergenic
AGGTAAACTTGATTGTAGTT+AGG 0.321428 3_4:-77035341 None:intergenic
AGGTAAACTTGATTAGAGTT+AGG 0.324677 3_4:-77035203 None:intergenic
TGGAGACATAATGGATGCTT+TGG 0.329852 3_4:+77036669 Msa0523600:CDS
AGGTAAACTTGATTGGAGTT+AGG 0.334772 3_4:-77035134 None:intergenic
CTCAATCAGGCTTACCTTGA+TGG 0.351388 3_4:+77035416 Msa0523600:CDS
TCTAATCCAAGTTATCTTGA+TGG 0.360948 3_4:+77034933 Msa0523600:CDS
AGTTGAAATATAAAATGATT+AGG 0.362732 3_4:-77036724 None:intergenic
GGTAAACTTGATTGTAGTTA+GGG 0.371166 3_4:-77035340 None:intergenic
TCCAATCAAGTTTACCTAGA+TGG 0.372314 3_4:+77035071 Msa0523600:CDS
TTGGTTCAGTTGGTGGCCTC+TGG 0.375839 3_4:-77036823 None:intergenic
GTTCTTCTAAGGGGTCAATA+TGG 0.383693 3_4:+77036649 Msa0523600:CDS
TCGATCTTGCTTTCTCAACT+TGG 0.386255 3_4:-77035799 None:intergenic
ACCAATCAAGTTTACCTAGA+TGG 0.387215 3_4:+77035002 Msa0523600:CDS
AGGTAAACTTGATTGGAGTT+AGG 0.390322 3_4:-77035686 None:intergenic
TGGCAGTAGTAAAGAGCATA+AGG 0.391483 3_4:-77036595 None:intergenic
CTAGTTCCCTTTGGTTCAGT+TGG 0.397858 3_4:-77036833 None:intergenic
TTGATCTTGCCTTCTCAACT+TGG 0.398535 3_4:-77035730 None:intergenic
ACTATGGATGATCTTTATGT+AGG 0.401691 3_4:+77036181 Msa0523600:CDS
GGTAAACTTGATTGGAGTTA+GGG 0.403936 3_4:-77035133 None:intergenic
GGTAAACTTGATTGGAGTTA+GGG 0.403936 3_4:-77035547 None:intergenic
GGTAAACTTGATTGGAGTTA+GGG 0.403936 3_4:-77035961 None:intergenic
TCGATCTTGCTTTCTCAACT+TGG 0.408406 3_4:-77035868 None:intergenic
GAGAATAGTTGAAGAAGGCT+TGG 0.410178 3_4:-77036298 None:intergenic
TCCAATCAAGTTTACCTTGA+CGG 0.412584 3_4:+77035140 Msa0523600:CDS
GTTCCCTTTGGTTCAGTTGG+TGG 0.415275 3_4:-77036830 None:intergenic
TGAGAGAGAATAGTTGAAGA+AGG 0.421944 3_4:-77036303 None:intergenic
GGTAAACTTGATTAGAGTTA+GGG 0.423201 3_4:-77035202 None:intergenic
AACCATCCATCAAGATAACT+TGG 0.424143 3_4:-77034939 None:intergenic
CGTGCTTTACAGGGAAGAAA+TGG 0.426994 3_4:-77036780 None:intergenic
CTAACTTGAATGCCTTTGTA+TGG 0.427506 3_4:-77036150 None:intergenic
ATCAGCCTTACCTTGATGGC+TGG 0.428156 3_4:+77034874 Msa0523600:CDS
TCCATCTAGGTAAACTTGAT+TGG 0.430236 3_4:-77035072 None:intergenic
TTGGTGGCCTCTGGTGGGAG+TGG 0.432130 3_4:-77036814 None:intergenic
CAACTACTTGGAATGAAGCC+TGG 0.433769 3_4:+77036742 Msa0523600:CDS
TCCATCAAGGTAAACTTGAT+TGG 0.436782 3_4:-77035693 None:intergenic
TCCATCAAGGTAAACTTGAT+TGG 0.436782 3_4:-77035969 None:intergenic
GTTCAGTTGGTGGCCTCTGG+TGG 0.441778 3_4:-77036820 None:intergenic
TATCTTTCAACCATCCATCT+AGG 0.444354 3_4:-77035016 None:intergenic
TGTCTTTCATGTCTTCACCT+TGG 0.444739 3_4:-77036339 None:intergenic
AACTTGATTGTAGTTAGGGT+TGG 0.447399 3_4:-77035336 None:intergenic
GAAAGATACCAAGGATCAAA+TGG 0.449700 3_4:+77035997 Msa0523600:CDS
GCCATCAAGGTAAACTTGAT+TGG 0.450457 3_4:-77035555 None:intergenic
AACTATCCACAACCTCAATC+AGG 0.453031 3_4:+77035403 Msa0523600:CDS
AAGTTAGCATATTCTCTGAT+AGG 0.453535 3_4:-77036226 None:intergenic
GTGAATTTGAACCCACAAAA+GGG 0.456334 3_4:+77036374 Msa0523600:CDS
GGTAAGCCTGATTGAGGTTG+TGG 0.457575 3_4:-77035409 None:intergenic
CAAGACATGGCAGAATCAAA+AGG 0.457794 3_4:+77036106 Msa0523600:CDS
ACCAATACACAACCTCAATC+AGG 0.459181 3_4:+77036024 Msa0523600:CDS
TCCGTCAAGGTAAACTTGAT+TGG 0.460129 3_4:-77035141 None:intergenic
TCCATCAAGATAAACTTGAT+TGG 0.461282 3_4:-77035831 None:intergenic
GAAAGACACCAAAGATCAAA+AGG 0.461407 3_4:+77035376 Msa0523600:CDS
ATCAAGTTTACCTTGATGGC+TGG 0.461599 3_4:+77035351 Msa0523600:CDS
GGGTCAATATGGAGACATAA+TGG 0.464907 3_4:+77036660 Msa0523600:CDS
TCCAACCAAGTTTATCTTGA+CGG 0.468204 3_4:+77035278 Msa0523600:CDS
TGTGAATTTGAACCCACAAA+AGG 0.468537 3_4:+77036373 Msa0523600:CDS
AGAGCATAAGGGTAAGGCCT+AGG 0.470306 3_4:-77036583 None:intergenic
AACTACTTGGAATGAAGCCT+GGG 0.472218 3_4:+77036743 Msa0523600:CDS
TCCATCTAGGTAAACTTGAT+TGG 0.472763 3_4:-77035003 None:intergenic
ACTAGCTATCCCACAACATC+AGG 0.475940 3_4:+77036487 Msa0523600:CDS
AACTTGATTGGAGTTAGGGG+TGG 0.478066 3_4:-77035129 None:intergenic
AACTTGATTGGAGTTAGGGG+TGG 0.478066 3_4:-77035543 None:intergenic
AACTTGATTGGAGTTAGGGG+TGG 0.478066 3_4:-77035957 None:intergenic
CCCTGTAAAGCACGTTCTAT+GGG 0.478082 3_4:+77036789 Msa0523600:CDS
CTATGGATGATCTTTATGTA+GGG 0.478680 3_4:+77036182 Msa0523600:CDS
GGTAGTTGCGACTTGGAGAA+AGG 0.479066 3_4:-77036277 None:intergenic
GCCTGATTGAGGTTGTGTAT+TGG 0.481303 3_4:-77036025 None:intergenic
GGAGACATAATGGATGCTTT+GGG 0.482669 3_4:+77036670 Msa0523600:CDS
CTACCTAGACATAGGGAGTA+AGG 0.491781 3_4:+77036618 Msa0523600:CDS
ATCAGGCTTACCTTGATGGT+TGG 0.493059 3_4:+77036041 Msa0523600:CDS
TAATGAAGTAGGACAAGCTT+TGG 0.493432 3_4:-77036401 None:intergenic
TTCAGTTGGTGGCCTCTGGT+GGG 0.494537 3_4:-77036819 None:intergenic
GATAAACTCGATTGGAGTTG+TGG 0.497172 3_4:-77035478 None:intergenic
ATCAAGTTTACCTTGATGGC+TGG 0.497883 3_4:+77035558 Msa0523600:CDS
TATCCTTTAACCATCCATCT+AGG 0.498476 3_4:-77035085 None:intergenic
GAAAGATACCAAGAATCAAA+AGG 0.504634 3_4:+77035031 Msa0523600:CDS
ATCAGGCTTACCTTGATGGC+TGG 0.504911 3_4:+77035420 Msa0523600:CDS
GGATATCTATGCTCCTAAAT+GGG 0.506971 3_4:+77036549 Msa0523600:CDS
ATCAAGTTTATCTTGATGGA+TGG 0.507762 3_4:+77035903 Msa0523600:CDS
AAGGCTTGGTAGTTGCGACT+TGG 0.508594 3_4:-77036284 None:intergenic
ATCAAGTTTATCTTGATGGA+TGG 0.510245 3_4:+77035627 Msa0523600:CDS
ATCAAGTTTATCTTGATGGA+TGG 0.510245 3_4:+77035834 Msa0523600:CDS
ATAAACTCGATTGGAGTTGT+GGG 0.512497 3_4:-77035477 None:intergenic
CCAACCAAGTTTATCTTGAC+GGG 0.512790 3_4:+77035279 Msa0523600:CDS
TGTCTTTCAACCAGCCATCA+AGG 0.516147 3_4:-77035361 None:intergenic
CATCTTTCAGCCAGCCATCA+AGG 0.517526 3_4:-77035568 None:intergenic
ACCATCCATCAAGATAAACT+TGG 0.519057 3_4:-77035766 None:intergenic
TGGCTGGTTAAAAGATAGTC+GGG 0.523097 3_4:+77035436 Msa0523600:CDS
ATCAAGTTTACCTTGATGGA+TGG 0.523440 3_4:+77035213 Msa0523600:CDS
ATCGAGTTTATCTTGATGGA+TGG 0.523903 3_4:+77035489 Msa0523600:CDS
TTAAGCCAGCCATCAAGGTA+AGG 0.525753 3_4:-77034879 None:intergenic
ATCAAGTTTACCTTGATGGA+TGG 0.525923 3_4:+77035696 Msa0523600:CDS
ACCAAGTTTATCTTGATGGA+TGG 0.525923 3_4:+77035765 Msa0523600:CDS
ATCAAGTTTACCTTGATGGA+TGG 0.525923 3_4:+77035972 Msa0523600:CDS
GATTCATGTCAGACGTGTCT+AGG 0.529464 3_4:-77036702 None:intergenic
ATGGCTGGTTAAAAGATAGT+CGG 0.532803 3_4:+77035435 Msa0523600:CDS
TCTTTCATGTCTTCACCTTG+GGG 0.533710 3_4:-77036337 None:intergenic
ATAAACTTGGTTGGAGTTTG+GGG 0.533931 3_4:-77035753 None:intergenic
TAGTAAAGAGCATAAGGGTA+AGG 0.534900 3_4:-77036589 None:intergenic
AACTCGATTGGAGTTGTGGG+TGG 0.536216 3_4:-77035474 None:intergenic
GGTCTTCAAAGTTCTTCTAA+GGG 0.536641 3_4:+77036639 Msa0523600:CDS
AATGGGTAGCTTGTCACCCT+AGG 0.538892 3_4:+77036566 Msa0523600:CDS
AACTTGATTGGAGTTAGGAG+TGG 0.538945 3_4:-77035681 None:intergenic
CTTGATGGATGGTTGAAAGA+TGG 0.539962 3_4:+77035776 Msa0523600:CDS
CTTGATGGATGGTTGAAAGA+TGG 0.539962 3_4:+77035914 Msa0523600:CDS
ATAAACTTGGTTGGAGTTTG+GGG 0.540923 3_4:-77035270 None:intergenic
GGTAAACTTGATTGGTGTTG+TGG 0.546018 3_4:-77034995 None:intergenic
GAAAGATAGCCAAGTTGAGA+AGG 0.546728 3_4:+77035721 Msa0523600:CDS
GGCAGTAGTAAAGAGCATAA+GGG 0.547129 3_4:-77036594 None:intergenic
TCCATCAAGATAAACTCGAT+TGG 0.551426 3_4:-77035486 None:intergenic
GAGCATAAGGGTAAGGCCTA+GGG 0.551678 3_4:-77036582 None:intergenic
ATCCAAGTTATCTTGATGGA+TGG 0.552457 3_4:+77034937 Msa0523600:CDS
GGTAAACTTGATTGGAGTCG+TGG 0.553661 3_4:-77035064 None:intergenic
TATCTTTCAACCATCCATCA+AGG 0.553950 3_4:-77035982 None:intergenic
CAAACGTGCACCTGATGTTG+TGG 0.555390 3_4:-77036497 None:intergenic
CCCATAGAACGTGCTTTACA+GGG 0.559017 3_4:-77036789 None:intergenic
ATCAAGTTTACCTTGACGGA+TGG 0.560773 3_4:+77035144 Msa0523600:CDS
ATCAAGTTTACCTAGATGGA+TGG 0.561030 3_4:+77035075 Msa0523600:CDS
ATCAAGTTTACCTAGATGGA+TGG 0.563100 3_4:+77035006 Msa0523600:CDS
TACTGCCACTACCTAGACAT+AGG 0.566616 3_4:+77036610 Msa0523600:CDS
AAGACATGGCAGAATCAAAA+GGG 0.567319 3_4:+77036107 Msa0523600:CDS
ACCACCCGTCAAGATAAACT+TGG 0.569100 3_4:-77035283 None:intergenic
TCCATCAAGATAAACTTGGT+TGG 0.570341 3_4:-77035762 None:intergenic
TACTCCCTATGTCTAGGTAG+TGG 0.570771 3_4:-77036615 None:intergenic
ACTGCCACTACCTAGACATA+GGG 0.575542 3_4:+77036611 Msa0523600:CDS
GTAAACTTGATTGGAGTCGT+GGG 0.579561 3_4:-77035063 None:intergenic
ACTCGATTGGAGTTGTGGGT+GGG 0.582962 3_4:-77035473 None:intergenic
AGACCTTACTCCCTATGTCT+AGG 0.584376 3_4:-77036621 None:intergenic
CATCAAGGTAAGCCTGATTG+AGG 0.584619 3_4:-77035415 None:intergenic
CATCAAGGTAAGCCTGATTG+AGG 0.584619 3_4:-77036036 None:intergenic
AGTCTTTCAACCAACCATCA+AGG 0.584877 3_4:-77036051 None:intergenic
CTCACAAACGATTCTCCCCA+AGG 0.585857 3_4:+77036322 Msa0523600:CDS
TATCTTTCAACCATCCATCA+AGG 0.588448 3_4:-77035223 None:intergenic
TATCTTTCAACCATCCATCA+AGG 0.588448 3_4:-77035706 None:intergenic
AGCATGGACTCTAATGAAGT+AGG 0.591847 3_4:-77036412 None:intergenic
CCCGTCAAGATAAACTTGGT+TGG 0.599307 3_4:-77035279 None:intergenic
AAACGTGCACCTGATGTTGT+GGG 0.607189 3_4:-77036496 None:intergenic
ACTATGAACAAATTCAAGCA+TGG 0.607524 3_4:-77036428 None:intergenic
AAAGATAGCCAAGTTGAGCA+AGG 0.607835 3_4:+77035653 Msa0523600:CDS
GTCTTCAAAGTTCTTCTAAG+GGG 0.613953 3_4:+77036640 Msa0523600:CDS
ATAAACTTGATTAGAGTTTG+GGG 0.616239 3_4:-77035891 None:intergenic
ATAAACTTGATTGGAGTTTG+GGG 0.619713 3_4:-77035822 None:intergenic
ACAGGGAAGAAATGGCACAT+AGG 0.619730 3_4:-77036772 None:intergenic
TGGCACATAGGAGCTTCCCC+AGG 0.628176 3_4:-77036760 None:intergenic
ATGGGCACCACTCCCACCAG+AGG 0.630918 3_4:+77036807 Msa0523600:CDS
TTCAAAAGTTGACCATACAA+AGG 0.632099 3_4:+77036138 Msa0523600:CDS
TGAATTTGAACCCACAAAAG+GGG 0.632371 3_4:+77036375 Msa0523600:CDS
ATAAACTTGATTGAAGTTTG+GGG 0.634939 3_4:-77035615 None:intergenic
ACCAAGTTTATCTTGACGGG+TGG 0.636426 3_4:+77035282 Msa0523600:CDS
GAAGAAAATTGGACAAGACA+TGG 0.638239 3_4:+77036093 Msa0523600:CDS
GTAAACTTGATTGGAGTTAG+GGG 0.649022 3_4:-77035132 None:intergenic
GTAAACTTGATTGGAGTTAG+GGG 0.649022 3_4:-77035546 None:intergenic
GTAAACTTGATTGGAGTTAG+GGG 0.649022 3_4:-77035960 None:intergenic
TCATGTCAGACGTGTCTAGG+TGG 0.678767 3_4:-77036699 None:intergenic
TGGATGGTTGAAAGATACCA+AGG 0.679634 3_4:+77035988 Msa0523600:CDS
ACTACTTGGAATGAAGCCTG+GGG 0.737264 3_4:+77036744 Msa0523600:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTTGAAATATAAAATGATT+AGG - chr3_4:77036727-77036746 None:intergenic 15.0%
!! AGTTGAAATATAAAATGATT+AGG - chr3_4:77036727-77036746 None:intergenic 15.0%
!!! CATTTTATATTTCAACTACT+TGG + chr3_4:77036730-77036749 Msa0523600:CDS 20.0%
!!! CATTTTATATTTCAACTACT+TGG + chr3_4:77036730-77036749 Msa0523600:CDS 20.0%
!!! TTTAGTTTTTTGTTCTTCAG+TGG - chr3_4:77034912-77034931 None:intergenic 25.0%
!!! ATAGCTTTTTTGTTTTCTTC+GGG - chr3_4:77034975-77034994 None:intergenic 25.0%
!!! GATAGCTTTTTTGTTTTCTT+CGG - chr3_4:77034976-77034995 None:intergenic 25.0%
!!! GGATTTTGTTTTTTGAACTT+GGG - chr3_4:77035111-77035130 None:intergenic 25.0%
!!! TGGATTTTGTTTTTTGAACT+TGG - chr3_4:77035112-77035131 None:intergenic 25.0%
!!! AGTTTTTTCCTTTTGATCTT+TGG - chr3_4:77035387-77035406 None:intergenic 25.0%
! ATAAACTTGATTGAAGTTTG+GGG - chr3_4:77035618-77035637 None:intergenic 25.0%
! GATAAACTTGATTGAAGTTT+GGG - chr3_4:77035619-77035638 None:intergenic 25.0%
! AGATAAACTTGATTGAAGTT+TGG - chr3_4:77035620-77035639 None:intergenic 25.0%
! TTCAATCAAGTTTATCTTGA+TGG + chr3_4:77035623-77035642 Msa0523600:CDS 25.0%
! ATAAACTTGATTAGAGTTTG+GGG - chr3_4:77035894-77035913 None:intergenic 25.0%
! GATAAACTTGATTAGAGTTT+GGG - chr3_4:77035895-77035914 None:intergenic 25.0%
! AGATAAACTTGATTAGAGTT+TGG - chr3_4:77035896-77035915 None:intergenic 25.0%
! TCTAATCAAGTTTATCTTGA+TGG + chr3_4:77035899-77035918 Msa0523600:CDS 25.0%
! AGTTGTGTGAATGTTATATT+TGG - chr3_4:77036470-77036489 None:intergenic 25.0%
!!! TTTAGTTTTTTGTTCTTCAG+TGG - chr3_4:77034912-77034931 None:intergenic 25.0%
!!! ATAGCTTTTTTGTTTTCTTC+GGG - chr3_4:77034975-77034994 None:intergenic 25.0%
!!! GATAGCTTTTTTGTTTTCTT+CGG - chr3_4:77034976-77034995 None:intergenic 25.0%
!!! GGATTTTGTTTTTTGAACTT+GGG - chr3_4:77035111-77035130 None:intergenic 25.0%
!!! TGGATTTTGTTTTTTGAACT+TGG - chr3_4:77035112-77035131 None:intergenic 25.0%
!!! AGTTTTTTCCTTTTGATCTT+TGG - chr3_4:77035387-77035406 None:intergenic 25.0%
! ATAAACTTGATTGAAGTTTG+GGG - chr3_4:77035618-77035637 None:intergenic 25.0%
! GATAAACTTGATTGAAGTTT+GGG - chr3_4:77035619-77035638 None:intergenic 25.0%
! AGATAAACTTGATTGAAGTT+TGG - chr3_4:77035620-77035639 None:intergenic 25.0%
! TTCAATCAAGTTTATCTTGA+TGG + chr3_4:77035623-77035642 Msa0523600:CDS 25.0%
! ATAAACTTGATTAGAGTTTG+GGG - chr3_4:77035894-77035913 None:intergenic 25.0%
! GATAAACTTGATTAGAGTTT+GGG - chr3_4:77035895-77035914 None:intergenic 25.0%
! AGATAAACTTGATTAGAGTT+TGG - chr3_4:77035896-77035915 None:intergenic 25.0%
! TCTAATCAAGTTTATCTTGA+TGG + chr3_4:77035899-77035918 Msa0523600:CDS 25.0%
! AGTTGTGTGAATGTTATATT+TGG - chr3_4:77036470-77036489 None:intergenic 25.0%
TCTAATCCAAGTTATCTTGA+TGG + chr3_4:77034933-77034952 Msa0523600:CDS 30.0%
GAAAGATACCAAGAATCAAA+AGG + chr3_4:77035031-77035050 Msa0523600:CDS 30.0%
!! AGTCTTTTCCTTTTGATTCT+TGG - chr3_4:77035042-77035061 None:intergenic 30.0%
! GAATTTTGCTTTCTCAACTT+GGG - chr3_4:77035180-77035199 None:intergenic 30.0%
! TGAATTTTGCTTTCTCAACT+TGG - chr3_4:77035181-77035200 None:intergenic 30.0%
GGTAAACTTGATTAGAGTTA+GGG - chr3_4:77035205-77035224 None:intergenic 30.0%
AGGTAAACTTGATTAGAGTT+AGG - chr3_4:77035206-77035225 None:intergenic 30.0%
TCTAATCAAGTTTACCTTGA+TGG + chr3_4:77035209-77035228 Msa0523600:CDS 30.0%
GGTAAACTTGATTGTAGTTA+GGG - chr3_4:77035343-77035362 None:intergenic 30.0%
AGGTAAACTTGATTGTAGTT+AGG - chr3_4:77035344-77035363 None:intergenic 30.0%
TACAATCAAGTTTACCTTGA+TGG + chr3_4:77035347-77035366 Msa0523600:CDS 30.0%
! TGGATTTTTCTTTCTCAACA+TGG - chr3_4:77035526-77035545 None:intergenic 30.0%
! TGATTTTGCTTTCTCAAGTT+GGG - chr3_4:77035594-77035613 None:intergenic 30.0%
! TTGATTTTGCTTTCTCAAGT+TGG - chr3_4:77035595-77035614 None:intergenic 30.0%
ATCAAGTTTATCTTGATGGA+TGG + chr3_4:77035627-77035646 Msa0523600:CDS 30.0%
ATAAACTTGATTGGAGTTTG+GGG - chr3_4:77035825-77035844 None:intergenic 30.0%
GATAAACTTGATTGGAGTTT+GGG - chr3_4:77035826-77035845 None:intergenic 30.0%
AGATAAACTTGATTGGAGTT+TGG - chr3_4:77035827-77035846 None:intergenic 30.0%
TCCAATCAAGTTTATCTTGA+TGG + chr3_4:77035830-77035849 Msa0523600:CDS 30.0%
TCCATCAAGATAAACTTGAT+TGG - chr3_4:77035627-77035646 None:intergenic 30.0%
ATCAAGTTTATCTTGATGGA+TGG + chr3_4:77035627-77035646 Msa0523600:CDS 30.0%
ATCAAGTTTATCTTGATGGA+TGG + chr3_4:77035627-77035646 Msa0523600:CDS 30.0%
TTCAAAAGTTGACCATACAA+AGG + chr3_4:77036138-77036157 Msa0523600:CDS 30.0%
!!! CAAGTTAGCTTTTTTCACTA+TGG + chr3_4:77036165-77036184 Msa0523600:CDS 30.0%
ACTATGGATGATCTTTATGT+AGG + chr3_4:77036181-77036200 Msa0523600:CDS 30.0%
CTATGGATGATCTTTATGTA+GGG + chr3_4:77036182-77036201 Msa0523600:CDS 30.0%
AAGTTAGCATATTCTCTGAT+AGG - chr3_4:77036229-77036248 None:intergenic 30.0%
!!! ATGTAGTCAGCTACTTTTTT+TGG - chr3_4:77036256-77036275 None:intergenic 30.0%
ACTATGAACAAATTCAAGCA+TGG - chr3_4:77036431-77036450 None:intergenic 30.0%
! GAATTTGTTCATAGTGTTCT+TGG + chr3_4:77036436-77036455 Msa0523600:CDS 30.0%
!! ATCCTTTGAGATTTCCAAAA+TGG - chr3_4:77036533-77036552 None:intergenic 30.0%
TCTAATCCAAGTTATCTTGA+TGG + chr3_4:77034933-77034952 Msa0523600:CDS 30.0%
GAAAGATACCAAGAATCAAA+AGG + chr3_4:77035031-77035050 Msa0523600:CDS 30.0%
!! AGTCTTTTCCTTTTGATTCT+TGG - chr3_4:77035042-77035061 None:intergenic 30.0%
! GAATTTTGCTTTCTCAACTT+GGG - chr3_4:77035180-77035199 None:intergenic 30.0%
! TGAATTTTGCTTTCTCAACT+TGG - chr3_4:77035181-77035200 None:intergenic 30.0%
GGTAAACTTGATTAGAGTTA+GGG - chr3_4:77035205-77035224 None:intergenic 30.0%
AGGTAAACTTGATTAGAGTT+AGG - chr3_4:77035206-77035225 None:intergenic 30.0%
TCTAATCAAGTTTACCTTGA+TGG + chr3_4:77035209-77035228 Msa0523600:CDS 30.0%
GGTAAACTTGATTGTAGTTA+GGG - chr3_4:77035343-77035362 None:intergenic 30.0%
AGGTAAACTTGATTGTAGTT+AGG - chr3_4:77035344-77035363 None:intergenic 30.0%
TACAATCAAGTTTACCTTGA+TGG + chr3_4:77035347-77035366 Msa0523600:CDS 30.0%
! TGGATTTTTCTTTCTCAACA+TGG - chr3_4:77035526-77035545 None:intergenic 30.0%
! TGATTTTGCTTTCTCAAGTT+GGG - chr3_4:77035594-77035613 None:intergenic 30.0%
! TTGATTTTGCTTTCTCAAGT+TGG - chr3_4:77035595-77035614 None:intergenic 30.0%
ATCAAGTTTATCTTGATGGA+TGG + chr3_4:77035627-77035646 Msa0523600:CDS 30.0%
ATAAACTTGATTGGAGTTTG+GGG - chr3_4:77035825-77035844 None:intergenic 30.0%
GATAAACTTGATTGGAGTTT+GGG - chr3_4:77035826-77035845 None:intergenic 30.0%
AGATAAACTTGATTGGAGTT+TGG - chr3_4:77035827-77035846 None:intergenic 30.0%
TCCAATCAAGTTTATCTTGA+TGG + chr3_4:77035830-77035849 Msa0523600:CDS 30.0%
TCCATCAAGATAAACTTGAT+TGG - chr3_4:77035627-77035646 None:intergenic 30.0%
ATCAAGTTTATCTTGATGGA+TGG + chr3_4:77035627-77035646 Msa0523600:CDS 30.0%
ATCAAGTTTATCTTGATGGA+TGG + chr3_4:77035627-77035646 Msa0523600:CDS 30.0%
TTCAAAAGTTGACCATACAA+AGG + chr3_4:77036138-77036157 Msa0523600:CDS 30.0%
!!! CAAGTTAGCTTTTTTCACTA+TGG + chr3_4:77036165-77036184 Msa0523600:CDS 30.0%
ACTATGGATGATCTTTATGT+AGG + chr3_4:77036181-77036200 Msa0523600:CDS 30.0%
CTATGGATGATCTTTATGTA+GGG + chr3_4:77036182-77036201 Msa0523600:CDS 30.0%
AAGTTAGCATATTCTCTGAT+AGG - chr3_4:77036229-77036248 None:intergenic 30.0%
!!! ATGTAGTCAGCTACTTTTTT+TGG - chr3_4:77036256-77036275 None:intergenic 30.0%
ACTATGAACAAATTCAAGCA+TGG - chr3_4:77036431-77036450 None:intergenic 30.0%
! GAATTTGTTCATAGTGTTCT+TGG + chr3_4:77036436-77036455 Msa0523600:CDS 30.0%
!! ATCCTTTGAGATTTCCAAAA+TGG - chr3_4:77036533-77036552 None:intergenic 30.0%
ATCCAAGTTATCTTGATGGA+TGG + chr3_4:77034937-77034956 Msa0523600:CDS 35.0%
AACCATCCATCAAGATAACT+TGG - chr3_4:77034942-77034961 None:intergenic 35.0%
ACCAATCAAGTTTACCTAGA+TGG + chr3_4:77035002-77035021 Msa0523600:CDS 35.0%
TCCATCTAGGTAAACTTGAT+TGG - chr3_4:77035006-77035025 None:intergenic 35.0%
ATCAAGTTTACCTAGATGGA+TGG + chr3_4:77035006-77035025 Msa0523600:CDS 35.0%
TATCTTTCAACCATCCATCT+AGG - chr3_4:77035019-77035038 None:intergenic 35.0%
TCCAATCAAGTTTACCTAGA+TGG + chr3_4:77035071-77035090 Msa0523600:CDS 35.0%
TCCATCTAGGTAAACTTGAT+TGG - chr3_4:77035006-77035025 None:intergenic 35.0%
ATCAAGTTTACCTAGATGGA+TGG + chr3_4:77035006-77035025 Msa0523600:CDS 35.0%
TTACCTAGATGGATGGTTAA+AGG + chr3_4:77035082-77035101 Msa0523600:CDS 35.0%
TATCCTTTAACCATCCATCT+AGG - chr3_4:77035088-77035107 None:intergenic 35.0%
GTAAACTTGATTGGAGTTAG+GGG - chr3_4:77035135-77035154 None:intergenic 35.0%
GGTAAACTTGATTGGAGTTA+GGG - chr3_4:77035136-77035155 None:intergenic 35.0%
AGGTAAACTTGATTGGAGTT+AGG - chr3_4:77035137-77035156 None:intergenic 35.0%
TCCAATCAAGTTTACCTTGA+CGG + chr3_4:77035140-77035159 Msa0523600:CDS 35.0%
ATCAAGTTTACCTTGATGGA+TGG + chr3_4:77035213-77035232 Msa0523600:CDS 35.0%
TATCTTTCAACCATCCATCA+AGG - chr3_4:77035226-77035245 None:intergenic 35.0%
! TCGATTTTGCTTTCTCATCT+TGG - chr3_4:77035250-77035269 None:intergenic 35.0%
ATAAACTTGGTTGGAGTTTG+GGG - chr3_4:77035273-77035292 None:intergenic 35.0%
GATAAACTTGGTTGGAGTTT+GGG - chr3_4:77035274-77035293 None:intergenic 35.0%
AGATAAACTTGGTTGGAGTT+TGG - chr3_4:77035275-77035294 None:intergenic 35.0%
TCCAACCAAGTTTATCTTGA+CGG + chr3_4:77035278-77035297 Msa0523600:CDS 35.0%
! TGGATTTTTCTTTCTCAGCA+TGG - chr3_4:77035319-77035338 None:intergenic 35.0%
AACTTGATTGTAGTTAGGGT+TGG - chr3_4:77035339-77035358 None:intergenic 35.0%
GAAAGACACCAAAGATCAAA+AGG + chr3_4:77035376-77035395 Msa0523600:CDS 35.0%
! TATCTTTTAACCAGCCATCA+AGG - chr3_4:77035433-77035452 None:intergenic 35.0%
! ATGGCTGGTTAAAAGATAGT+CGG + chr3_4:77035435-77035454 Msa0523600:CDS 35.0%
ATAAACTCGATTGGAGTTGT+GGG - chr3_4:77035480-77035499 None:intergenic 35.0%
TCCAATCGAGTTTATCTTGA+TGG + chr3_4:77035485-77035504 Msa0523600:CDS 35.0%
TCCATCAAGATAAACTCGAT+TGG - chr3_4:77035489-77035508 None:intergenic 35.0%
ATCGAGTTTATCTTGATGGA+TGG + chr3_4:77035489-77035508 Msa0523600:CDS 35.0%
GTAAACTTGATTGGAGTTAG+GGG - chr3_4:77035135-77035154 None:intergenic 35.0%
GGTAAACTTGATTGGAGTTA+GGG - chr3_4:77035136-77035155 None:intergenic 35.0%
AGGTAAACTTGATTGGAGTT+AGG - chr3_4:77035137-77035156 None:intergenic 35.0%
TCCAATCAAGTTTACCTTGA+TGG + chr3_4:77035140-77035159 Msa0523600:CDS 35.0%
AGGTAAACTTGATTGGAGTT+AGG - chr3_4:77035137-77035156 None:intergenic 35.0%
TCCAATCAAGTTTACCTTGA+TGG + chr3_4:77035140-77035159 Msa0523600:CDS 35.0%
TCCATCAAGGTAAACTTGAT+TGG - chr3_4:77035213-77035232 None:intergenic 35.0%
ATCAAGTTTACCTTGATGGA+TGG + chr3_4:77035213-77035232 Msa0523600:CDS 35.0%
TATCTTTCAACCATCCATCA+AGG - chr3_4:77035226-77035245 None:intergenic 35.0%
ATAAACTTGGTTGGAGTTTG+GGG - chr3_4:77035273-77035292 None:intergenic 35.0%
GATAAACTTGGTTGGAGTTT+GGG - chr3_4:77035274-77035293 None:intergenic 35.0%
AGATAAACTTGGTTGGAGTT+TGG - chr3_4:77035275-77035294 None:intergenic 35.0%
TCCAACCAAGTTTATCTTGA+TGG + chr3_4:77035278-77035297 Msa0523600:CDS 35.0%
TCCATCAAGATAAACTTGGT+TGG - chr3_4:77035765-77035784 None:intergenic 35.0%
ACCAAGTTTATCTTGATGGA+TGG + chr3_4:77035765-77035784 Msa0523600:CDS 35.0%
ACCATCCATCAAGATAAACT+TGG - chr3_4:77035493-77035512 None:intergenic 35.0%
! TGGATTTTACTTGCTCAACT+TGG - chr3_4:77035940-77035959 None:intergenic 35.0%
GTAAACTTGATTGGAGTTAG+GGG - chr3_4:77035135-77035154 None:intergenic 35.0%
GGTAAACTTGATTGGAGTTA+GGG - chr3_4:77035136-77035155 None:intergenic 35.0%
AGGTAAACTTGATTGGAGTT+AGG - chr3_4:77035137-77035156 None:intergenic 35.0%
TCCAATCAAGTTTACCTTGA+TGG + chr3_4:77035140-77035159 Msa0523600:CDS 35.0%
TCCATCAAGGTAAACTTGAT+TGG - chr3_4:77035213-77035232 None:intergenic 35.0%
ATCAAGTTTACCTTGATGGA+TGG + chr3_4:77035213-77035232 Msa0523600:CDS 35.0%
TATCTTTCAACCATCCATCA+AGG - chr3_4:77035226-77035245 None:intergenic 35.0%
GAAAGATACCAAGGATCAAA+TGG + chr3_4:77035997-77036016 Msa0523600:CDS 35.0%
! TGGTTTTTCCATTTGATCCT+TGG - chr3_4:77036008-77036027 None:intergenic 35.0%
! GTCTTGTCCAATTTTCTTCA+TGG - chr3_4:77036092-77036111 None:intergenic 35.0%
GAAGAAAATTGGACAAGACA+TGG + chr3_4:77036093-77036112 Msa0523600:CDS 35.0%
AAGACATGGCAGAATCAAAA+GGG + chr3_4:77036107-77036126 Msa0523600:CDS 35.0%
!! GTATGGTCAACTTTTGAAGA+TGG - chr3_4:77036136-77036155 None:intergenic 35.0%
CTAACTTGAATGCCTTTGTA+TGG - chr3_4:77036153-77036172 None:intergenic 35.0%
TGAGAGAGAATAGTTGAAGA+AGG - chr3_4:77036306-77036325 None:intergenic 35.0%
TGTGAATTTGAACCCACAAA+AGG + chr3_4:77036373-77036392 Msa0523600:CDS 35.0%
GTGAATTTGAACCCACAAAA+GGG + chr3_4:77036374-77036393 Msa0523600:CDS 35.0%
TGAATTTGAACCCACAAAAG+GGG + chr3_4:77036375-77036394 Msa0523600:CDS 35.0%
TAATGAAGTAGGACAAGCTT+TGG - chr3_4:77036404-77036423 None:intergenic 35.0%
! TTTGCAGAACTACACCATTT+TGG + chr3_4:77036516-77036535 Msa0523600:CDS 35.0%
!! CACCATTTTGGAAATCTCAA+AGG + chr3_4:77036528-77036547 Msa0523600:CDS 35.0%
AGGATATCTATGCTCCTAAA+TGG + chr3_4:77036548-77036567 Msa0523600:CDS 35.0%
GGATATCTATGCTCCTAAAT+GGG + chr3_4:77036549-77036568 Msa0523600:CDS 35.0%
! TAGTAAAGAGCATAAGGGTA+AGG - chr3_4:77036592-77036611 None:intergenic 35.0%
AGGTCTTCAAAGTTCTTCTA+AGG + chr3_4:77036638-77036657 Msa0523600:CDS 35.0%
GGTCTTCAAAGTTCTTCTAA+GGG + chr3_4:77036639-77036658 Msa0523600:CDS 35.0%
GTCTTCAAAGTTCTTCTAAG+GGG + chr3_4:77036640-77036659 Msa0523600:CDS 35.0%
ATCCAAGTTATCTTGATGGA+TGG + chr3_4:77034937-77034956 Msa0523600:CDS 35.0%
AACCATCCATCAAGATAACT+TGG - chr3_4:77034942-77034961 None:intergenic 35.0%
ACCAATCAAGTTTACCTAGA+TGG + chr3_4:77035002-77035021 Msa0523600:CDS 35.0%
TCCATCTAGGTAAACTTGAT+TGG - chr3_4:77035006-77035025 None:intergenic 35.0%
ATCAAGTTTACCTAGATGGA+TGG + chr3_4:77035006-77035025 Msa0523600:CDS 35.0%
TATCTTTCAACCATCCATCT+AGG - chr3_4:77035019-77035038 None:intergenic 35.0%
TCCAATCAAGTTTACCTAGA+TGG + chr3_4:77035071-77035090 Msa0523600:CDS 35.0%
TCCATCTAGGTAAACTTGAT+TGG - chr3_4:77035006-77035025 None:intergenic 35.0%
ATCAAGTTTACCTAGATGGA+TGG + chr3_4:77035006-77035025 Msa0523600:CDS 35.0%
TTACCTAGATGGATGGTTAA+AGG + chr3_4:77035082-77035101 Msa0523600:CDS 35.0%
TATCCTTTAACCATCCATCT+AGG - chr3_4:77035088-77035107 None:intergenic 35.0%
GTAAACTTGATTGGAGTTAG+GGG - chr3_4:77035135-77035154 None:intergenic 35.0%
GGTAAACTTGATTGGAGTTA+GGG - chr3_4:77035136-77035155 None:intergenic 35.0%
AGGTAAACTTGATTGGAGTT+AGG - chr3_4:77035137-77035156 None:intergenic 35.0%
TCCAATCAAGTTTACCTTGA+CGG + chr3_4:77035140-77035159 Msa0523600:CDS 35.0%
ATCAAGTTTACCTTGATGGA+TGG + chr3_4:77035213-77035232 Msa0523600:CDS 35.0%
TATCTTTCAACCATCCATCA+AGG - chr3_4:77035226-77035245 None:intergenic 35.0%
! TCGATTTTGCTTTCTCATCT+TGG - chr3_4:77035250-77035269 None:intergenic 35.0%
ATAAACTTGGTTGGAGTTTG+GGG - chr3_4:77035273-77035292 None:intergenic 35.0%
GATAAACTTGGTTGGAGTTT+GGG - chr3_4:77035274-77035293 None:intergenic 35.0%
AGATAAACTTGGTTGGAGTT+TGG - chr3_4:77035275-77035294 None:intergenic 35.0%
TCCAACCAAGTTTATCTTGA+CGG + chr3_4:77035278-77035297 Msa0523600:CDS 35.0%
! TGGATTTTTCTTTCTCAGCA+TGG - chr3_4:77035319-77035338 None:intergenic 35.0%
AACTTGATTGTAGTTAGGGT+TGG - chr3_4:77035339-77035358 None:intergenic 35.0%
GAAAGACACCAAAGATCAAA+AGG + chr3_4:77035376-77035395 Msa0523600:CDS 35.0%
! TATCTTTTAACCAGCCATCA+AGG - chr3_4:77035433-77035452 None:intergenic 35.0%
! ATGGCTGGTTAAAAGATAGT+CGG + chr3_4:77035435-77035454 Msa0523600:CDS 35.0%
ATAAACTCGATTGGAGTTGT+GGG - chr3_4:77035480-77035499 None:intergenic 35.0%
TCCAATCGAGTTTATCTTGA+TGG + chr3_4:77035485-77035504 Msa0523600:CDS 35.0%
TCCATCAAGATAAACTCGAT+TGG - chr3_4:77035489-77035508 None:intergenic 35.0%
ATCGAGTTTATCTTGATGGA+TGG + chr3_4:77035489-77035508 Msa0523600:CDS 35.0%
GTAAACTTGATTGGAGTTAG+GGG - chr3_4:77035135-77035154 None:intergenic 35.0%
GGTAAACTTGATTGGAGTTA+GGG - chr3_4:77035136-77035155 None:intergenic 35.0%
AGGTAAACTTGATTGGAGTT+AGG - chr3_4:77035137-77035156 None:intergenic 35.0%
TCCAATCAAGTTTACCTTGA+TGG + chr3_4:77035140-77035159 Msa0523600:CDS 35.0%
AGGTAAACTTGATTGGAGTT+AGG - chr3_4:77035137-77035156 None:intergenic 35.0%
TCCAATCAAGTTTACCTTGA+TGG + chr3_4:77035140-77035159 Msa0523600:CDS 35.0%
TCCATCAAGGTAAACTTGAT+TGG - chr3_4:77035213-77035232 None:intergenic 35.0%
ATCAAGTTTACCTTGATGGA+TGG + chr3_4:77035213-77035232 Msa0523600:CDS 35.0%
TATCTTTCAACCATCCATCA+AGG - chr3_4:77035226-77035245 None:intergenic 35.0%
ATAAACTTGGTTGGAGTTTG+GGG - chr3_4:77035273-77035292 None:intergenic 35.0%
GATAAACTTGGTTGGAGTTT+GGG - chr3_4:77035274-77035293 None:intergenic 35.0%
AGATAAACTTGGTTGGAGTT+TGG - chr3_4:77035275-77035294 None:intergenic 35.0%
TCCAACCAAGTTTATCTTGA+TGG + chr3_4:77035278-77035297 Msa0523600:CDS 35.0%
TCCATCAAGATAAACTTGGT+TGG - chr3_4:77035765-77035784 None:intergenic 35.0%
ACCAAGTTTATCTTGATGGA+TGG + chr3_4:77035765-77035784 Msa0523600:CDS 35.0%
ACCATCCATCAAGATAAACT+TGG - chr3_4:77035493-77035512 None:intergenic 35.0%
! TGGATTTTACTTGCTCAACT+TGG - chr3_4:77035940-77035959 None:intergenic 35.0%
GTAAACTTGATTGGAGTTAG+GGG - chr3_4:77035135-77035154 None:intergenic 35.0%
GGTAAACTTGATTGGAGTTA+GGG - chr3_4:77035136-77035155 None:intergenic 35.0%
AGGTAAACTTGATTGGAGTT+AGG - chr3_4:77035137-77035156 None:intergenic 35.0%
TCCAATCAAGTTTACCTTGA+TGG + chr3_4:77035140-77035159 Msa0523600:CDS 35.0%
TCCATCAAGGTAAACTTGAT+TGG - chr3_4:77035213-77035232 None:intergenic 35.0%
ATCAAGTTTACCTTGATGGA+TGG + chr3_4:77035213-77035232 Msa0523600:CDS 35.0%
TATCTTTCAACCATCCATCA+AGG - chr3_4:77035226-77035245 None:intergenic 35.0%
GAAAGATACCAAGGATCAAA+TGG + chr3_4:77035997-77036016 Msa0523600:CDS 35.0%
! TGGTTTTTCCATTTGATCCT+TGG - chr3_4:77036008-77036027 None:intergenic 35.0%
! GTCTTGTCCAATTTTCTTCA+TGG - chr3_4:77036092-77036111 None:intergenic 35.0%
GAAGAAAATTGGACAAGACA+TGG + chr3_4:77036093-77036112 Msa0523600:CDS 35.0%
AAGACATGGCAGAATCAAAA+GGG + chr3_4:77036107-77036126 Msa0523600:CDS 35.0%
!! GTATGGTCAACTTTTGAAGA+TGG - chr3_4:77036136-77036155 None:intergenic 35.0%
CTAACTTGAATGCCTTTGTA+TGG - chr3_4:77036153-77036172 None:intergenic 35.0%
TGAGAGAGAATAGTTGAAGA+AGG - chr3_4:77036306-77036325 None:intergenic 35.0%
TGTGAATTTGAACCCACAAA+AGG + chr3_4:77036373-77036392 Msa0523600:CDS 35.0%
GTGAATTTGAACCCACAAAA+GGG + chr3_4:77036374-77036393 Msa0523600:CDS 35.0%
TGAATTTGAACCCACAAAAG+GGG + chr3_4:77036375-77036394 Msa0523600:CDS 35.0%
TAATGAAGTAGGACAAGCTT+TGG - chr3_4:77036404-77036423 None:intergenic 35.0%
! TTTGCAGAACTACACCATTT+TGG + chr3_4:77036516-77036535 Msa0523600:CDS 35.0%
!! CACCATTTTGGAAATCTCAA+AGG + chr3_4:77036528-77036547 Msa0523600:CDS 35.0%
AGGATATCTATGCTCCTAAA+TGG + chr3_4:77036548-77036567 Msa0523600:CDS 35.0%
GGATATCTATGCTCCTAAAT+GGG + chr3_4:77036549-77036568 Msa0523600:CDS 35.0%
! TAGTAAAGAGCATAAGGGTA+AGG - chr3_4:77036592-77036611 None:intergenic 35.0%
AGGTCTTCAAAGTTCTTCTA+AGG + chr3_4:77036638-77036657 Msa0523600:CDS 35.0%
GGTCTTCAAAGTTCTTCTAA+GGG + chr3_4:77036639-77036658 Msa0523600:CDS 35.0%
GTCTTCAAAGTTCTTCTAAG+GGG + chr3_4:77036640-77036659 Msa0523600:CDS 35.0%
!! TGTTTTTAAGCCAGCCATCA+AGG - chr3_4:77034887-77034906 None:intergenic 40.0%
!! GGTAAACTTGATTGGTGTTG+TGG - chr3_4:77034998-77035017 None:intergenic 40.0%
GTAAACTTGATTGGAGTCGT+GGG - chr3_4:77035066-77035085 None:intergenic 40.0%
TCCGTCAAGGTAAACTTGAT+TGG - chr3_4:77035144-77035163 None:intergenic 40.0%
ATCAAGTTTACCTTGACGGA+TGG + chr3_4:77035144-77035163 Msa0523600:CDS 40.0%
! TATCTTTTAGCCATCCGTCA+AGG - chr3_4:77035157-77035176 None:intergenic 40.0%
CCAACCAAGTTTATCTTGAC+GGG + chr3_4:77035279-77035298 Msa0523600:CDS 40.0%
! ATCAAGTTTACCTTGATGGC+TGG + chr3_4:77035351-77035370 Msa0523600:CDS 40.0%
AACTATCCACAACCTCAATC+AGG + chr3_4:77035403-77035422 Msa0523600:CDS 40.0%
! TGGCTGGTTAAAAGATAGTC+GGG + chr3_4:77035436-77035455 Msa0523600:CDS 40.0%
GATAAACTCGATTGGAGTTG+TGG - chr3_4:77035481-77035500 None:intergenic 40.0%
GCCATCAAGGTAAACTTGAT+TGG - chr3_4:77035351-77035370 None:intergenic 40.0%
! ATCAAGTTTACCTTGATGGC+TGG + chr3_4:77035351-77035370 Msa0523600:CDS 40.0%
! AAAGATAGCCAAGTTGAGCA+AGG + chr3_4:77035653-77035672 Msa0523600:CDS 40.0%
! TGGATTTTCCTTGCTCAACT+TGG - chr3_4:77035664-77035683 None:intergenic 40.0%
AACTTGATTGGAGTTAGGAG+TGG - chr3_4:77035684-77035703 None:intergenic 40.0%
! GAAAGATAGCCAAGTTGAGA+AGG + chr3_4:77035721-77035740 Msa0523600:CDS 40.0%
TTGATCTTGCCTTCTCAACT+TGG - chr3_4:77035733-77035752 None:intergenic 40.0%
! CTTGATGGATGGTTGAAAGA+TGG + chr3_4:77034948-77034967 Msa0523600:CDS 40.0%
TCGATCTTGCTTTCTCAACT+TGG - chr3_4:77035802-77035821 None:intergenic 40.0%
TCGATCTTGCTTTCTCAACT+TGG - chr3_4:77035802-77035821 None:intergenic 40.0%
! CTTGATGGATGGTTGAAAGA+TGG + chr3_4:77034948-77034967 Msa0523600:CDS 40.0%
TGGATGGTTGAAAGATACCA+AGG + chr3_4:77035022-77035041 Msa0523600:CDS 40.0%
ACCAATACACAACCTCAATC+AGG + chr3_4:77036024-77036043 Msa0523600:CDS 40.0%
AGTCTTTCAACCAACCATCA+AGG - chr3_4:77036054-77036073 None:intergenic 40.0%
GCGAACTCCATGAAGAAAAT+TGG + chr3_4:77036082-77036101 Msa0523600:CDS 40.0%
CAAGACATGGCAGAATCAAA+AGG + chr3_4:77036106-77036125 Msa0523600:CDS 40.0%
GAGAATAGTTGAAGAAGGCT+TGG - chr3_4:77036301-77036320 None:intergenic 40.0%
TCTTTCATGTCTTCACCTTG+GGG - chr3_4:77036340-77036359 None:intergenic 40.0%
GTCTTTCATGTCTTCACCTT+GGG - chr3_4:77036341-77036360 None:intergenic 40.0%
TGTCTTTCATGTCTTCACCT+TGG - chr3_4:77036342-77036361 None:intergenic 40.0%
AGCATGGACTCTAATGAAGT+AGG - chr3_4:77036415-77036434 None:intergenic 40.0%
! GGCAGTAGTAAAGAGCATAA+GGG - chr3_4:77036597-77036616 None:intergenic 40.0%
! TGGCAGTAGTAAAGAGCATA+AGG - chr3_4:77036598-77036617 None:intergenic 40.0%
! GTTCTTCTAAGGGGTCAATA+TGG + chr3_4:77036649-77036668 Msa0523600:CDS 40.0%
GGGTCAATATGGAGACATAA+TGG + chr3_4:77036660-77036679 Msa0523600:CDS 40.0%
!! TGGAGACATAATGGATGCTT+TGG + chr3_4:77036669-77036688 Msa0523600:CDS 40.0%
!! GGAGACATAATGGATGCTTT+GGG + chr3_4:77036670-77036689 Msa0523600:CDS 40.0%
AACTACTTGGAATGAAGCCT+GGG + chr3_4:77036743-77036762 Msa0523600:CDS 40.0%
!! TGTTTTTAAGCCAGCCATCA+AGG - chr3_4:77034887-77034906 None:intergenic 40.0%
!! GGTAAACTTGATTGGTGTTG+TGG - chr3_4:77034998-77035017 None:intergenic 40.0%
GTAAACTTGATTGGAGTCGT+GGG - chr3_4:77035066-77035085 None:intergenic 40.0%
TCCGTCAAGGTAAACTTGAT+TGG - chr3_4:77035144-77035163 None:intergenic 40.0%
ATCAAGTTTACCTTGACGGA+TGG + chr3_4:77035144-77035163 Msa0523600:CDS 40.0%
! TATCTTTTAGCCATCCGTCA+AGG - chr3_4:77035157-77035176 None:intergenic 40.0%
CCAACCAAGTTTATCTTGAC+GGG + chr3_4:77035279-77035298 Msa0523600:CDS 40.0%
! ATCAAGTTTACCTTGATGGC+TGG + chr3_4:77035351-77035370 Msa0523600:CDS 40.0%
AACTATCCACAACCTCAATC+AGG + chr3_4:77035403-77035422 Msa0523600:CDS 40.0%
! TGGCTGGTTAAAAGATAGTC+GGG + chr3_4:77035436-77035455 Msa0523600:CDS 40.0%
GATAAACTCGATTGGAGTTG+TGG - chr3_4:77035481-77035500 None:intergenic 40.0%
GCCATCAAGGTAAACTTGAT+TGG - chr3_4:77035351-77035370 None:intergenic 40.0%
! ATCAAGTTTACCTTGATGGC+TGG + chr3_4:77035351-77035370 Msa0523600:CDS 40.0%
! AAAGATAGCCAAGTTGAGCA+AGG + chr3_4:77035653-77035672 Msa0523600:CDS 40.0%
! TGGATTTTCCTTGCTCAACT+TGG - chr3_4:77035664-77035683 None:intergenic 40.0%
AACTTGATTGGAGTTAGGAG+TGG - chr3_4:77035684-77035703 None:intergenic 40.0%
! GAAAGATAGCCAAGTTGAGA+AGG + chr3_4:77035721-77035740 Msa0523600:CDS 40.0%
TTGATCTTGCCTTCTCAACT+TGG - chr3_4:77035733-77035752 None:intergenic 40.0%
! CTTGATGGATGGTTGAAAGA+TGG + chr3_4:77034948-77034967 Msa0523600:CDS 40.0%
TCGATCTTGCTTTCTCAACT+TGG - chr3_4:77035802-77035821 None:intergenic 40.0%
TCGATCTTGCTTTCTCAACT+TGG - chr3_4:77035802-77035821 None:intergenic 40.0%
! CTTGATGGATGGTTGAAAGA+TGG + chr3_4:77034948-77034967 Msa0523600:CDS 40.0%
TGGATGGTTGAAAGATACCA+AGG + chr3_4:77035022-77035041 Msa0523600:CDS 40.0%
ACCAATACACAACCTCAATC+AGG + chr3_4:77036024-77036043 Msa0523600:CDS 40.0%
AGTCTTTCAACCAACCATCA+AGG - chr3_4:77036054-77036073 None:intergenic 40.0%
GCGAACTCCATGAAGAAAAT+TGG + chr3_4:77036082-77036101 Msa0523600:CDS 40.0%
CAAGACATGGCAGAATCAAA+AGG + chr3_4:77036106-77036125 Msa0523600:CDS 40.0%
GAGAATAGTTGAAGAAGGCT+TGG - chr3_4:77036301-77036320 None:intergenic 40.0%
TCTTTCATGTCTTCACCTTG+GGG - chr3_4:77036340-77036359 None:intergenic 40.0%
GTCTTTCATGTCTTCACCTT+GGG - chr3_4:77036341-77036360 None:intergenic 40.0%
TGTCTTTCATGTCTTCACCT+TGG - chr3_4:77036342-77036361 None:intergenic 40.0%
AGCATGGACTCTAATGAAGT+AGG - chr3_4:77036415-77036434 None:intergenic 40.0%
! GGCAGTAGTAAAGAGCATAA+GGG - chr3_4:77036597-77036616 None:intergenic 40.0%
! TGGCAGTAGTAAAGAGCATA+AGG - chr3_4:77036598-77036617 None:intergenic 40.0%
! GTTCTTCTAAGGGGTCAATA+TGG + chr3_4:77036649-77036668 Msa0523600:CDS 40.0%
GGGTCAATATGGAGACATAA+TGG + chr3_4:77036660-77036679 Msa0523600:CDS 40.0%
!! TGGAGACATAATGGATGCTT+TGG + chr3_4:77036669-77036688 Msa0523600:CDS 40.0%
!! GGAGACATAATGGATGCTTT+GGG + chr3_4:77036670-77036689 Msa0523600:CDS 40.0%
AACTACTTGGAATGAAGCCT+GGG + chr3_4:77036743-77036762 Msa0523600:CDS 40.0%
GTTGATCAGCCTTACCTTGA+TGG + chr3_4:77034870-77034889 Msa0523600:CDS 45.0%
TTAAGCCAGCCATCAAGGTA+AGG - chr3_4:77034882-77034901 None:intergenic 45.0%
GGTAAACTTGATTGGAGTCG+TGG - chr3_4:77035067-77035086 None:intergenic 45.0%
AACTTGATTGGAGTTAGGGG+TGG - chr3_4:77035132-77035151 None:intergenic 45.0%
CCCGTCAAGATAAACTTGGT+TGG - chr3_4:77035282-77035301 None:intergenic 45.0%
ACCAAGTTTATCTTGACGGG+TGG + chr3_4:77035282-77035301 Msa0523600:CDS 45.0%
ACCACCCGTCAAGATAAACT+TGG - chr3_4:77035286-77035305 None:intergenic 45.0%
TGTCTTTCAACCAGCCATCA+AGG - chr3_4:77035364-77035383 None:intergenic 45.0%
CATCAAGGTAAGCCTGATTG+AGG - chr3_4:77035418-77035437 None:intergenic 45.0%
CTCAATCAGGCTTACCTTGA+TGG + chr3_4:77035416-77035435 Msa0523600:CDS 45.0%
AACTTGATTGGAGTTAGGGG+TGG - chr3_4:77035132-77035151 None:intergenic 45.0%
AACTTGATTGGAGTTAGGGG+TGG - chr3_4:77035132-77035151 None:intergenic 45.0%
GCCTGATTGAGGTTGTGTAT+TGG - chr3_4:77036028-77036047 None:intergenic 45.0%
CATCAAGGTAAGCCTGATTG+AGG - chr3_4:77035418-77035437 None:intergenic 45.0%
CTCAATCAGGCTTACCTTGA+TGG + chr3_4:77035416-77035435 Msa0523600:CDS 45.0%
! ATCAGGCTTACCTTGATGGT+TGG + chr3_4:77036041-77036060 Msa0523600:CDS 45.0%
ACTAGCTATCCCACAACATC+AGG + chr3_4:77036487-77036506 Msa0523600:CDS 45.0%
AAACGTGCACCTGATGTTGT+GGG - chr3_4:77036499-77036518 None:intergenic 45.0%
TACTGCCACTACCTAGACAT+AGG + chr3_4:77036610-77036629 Msa0523600:CDS 45.0%
ACTGCCACTACCTAGACATA+GGG + chr3_4:77036611-77036630 Msa0523600:CDS 45.0%
TACTCCCTATGTCTAGGTAG+TGG - chr3_4:77036618-77036637 None:intergenic 45.0%
CTACCTAGACATAGGGAGTA+AGG + chr3_4:77036618-77036637 Msa0523600:CDS 45.0%
AGACCTTACTCCCTATGTCT+AGG - chr3_4:77036624-77036643 None:intergenic 45.0%
GATTCATGTCAGACGTGTCT+AGG - chr3_4:77036705-77036724 None:intergenic 45.0%
CAACTACTTGGAATGAAGCC+TGG + chr3_4:77036742-77036761 Msa0523600:CDS 45.0%
ACTACTTGGAATGAAGCCTG+GGG + chr3_4:77036744-77036763 Msa0523600:CDS 45.0%
ACAGGGAAGAAATGGCACAT+AGG - chr3_4:77036775-77036794 None:intergenic 45.0%
CGTGCTTTACAGGGAAGAAA+TGG - chr3_4:77036783-77036802 None:intergenic 45.0%
TCCCTGTAAAGCACGTTCTA+TGG + chr3_4:77036788-77036807 Msa0523600:CDS 45.0%
CCCATAGAACGTGCTTTACA+GGG - chr3_4:77036792-77036811 None:intergenic 45.0%
CCCTGTAAAGCACGTTCTAT+GGG + chr3_4:77036789-77036808 Msa0523600:CDS 45.0%
GTTGATCAGCCTTACCTTGA+TGG + chr3_4:77034870-77034889 Msa0523600:CDS 45.0%
TTAAGCCAGCCATCAAGGTA+AGG - chr3_4:77034882-77034901 None:intergenic 45.0%
GGTAAACTTGATTGGAGTCG+TGG - chr3_4:77035067-77035086 None:intergenic 45.0%
AACTTGATTGGAGTTAGGGG+TGG - chr3_4:77035132-77035151 None:intergenic 45.0%
CCCGTCAAGATAAACTTGGT+TGG - chr3_4:77035282-77035301 None:intergenic 45.0%
ACCAAGTTTATCTTGACGGG+TGG + chr3_4:77035282-77035301 Msa0523600:CDS 45.0%
ACCACCCGTCAAGATAAACT+TGG - chr3_4:77035286-77035305 None:intergenic 45.0%
TGTCTTTCAACCAGCCATCA+AGG - chr3_4:77035364-77035383 None:intergenic 45.0%
CATCAAGGTAAGCCTGATTG+AGG - chr3_4:77035418-77035437 None:intergenic 45.0%
CTCAATCAGGCTTACCTTGA+TGG + chr3_4:77035416-77035435 Msa0523600:CDS 45.0%
AACTTGATTGGAGTTAGGGG+TGG - chr3_4:77035132-77035151 None:intergenic 45.0%
AACTTGATTGGAGTTAGGGG+TGG - chr3_4:77035132-77035151 None:intergenic 45.0%
GCCTGATTGAGGTTGTGTAT+TGG - chr3_4:77036028-77036047 None:intergenic 45.0%
CATCAAGGTAAGCCTGATTG+AGG - chr3_4:77035418-77035437 None:intergenic 45.0%
CTCAATCAGGCTTACCTTGA+TGG + chr3_4:77035416-77035435 Msa0523600:CDS 45.0%
! ATCAGGCTTACCTTGATGGT+TGG + chr3_4:77036041-77036060 Msa0523600:CDS 45.0%
ACTAGCTATCCCACAACATC+AGG + chr3_4:77036487-77036506 Msa0523600:CDS 45.0%
AAACGTGCACCTGATGTTGT+GGG - chr3_4:77036499-77036518 None:intergenic 45.0%
TACTGCCACTACCTAGACAT+AGG + chr3_4:77036610-77036629 Msa0523600:CDS 45.0%
ACTGCCACTACCTAGACATA+GGG + chr3_4:77036611-77036630 Msa0523600:CDS 45.0%
TACTCCCTATGTCTAGGTAG+TGG - chr3_4:77036618-77036637 None:intergenic 45.0%
CTACCTAGACATAGGGAGTA+AGG + chr3_4:77036618-77036637 Msa0523600:CDS 45.0%
AGACCTTACTCCCTATGTCT+AGG - chr3_4:77036624-77036643 None:intergenic 45.0%
GATTCATGTCAGACGTGTCT+AGG - chr3_4:77036705-77036724 None:intergenic 45.0%
CAACTACTTGGAATGAAGCC+TGG + chr3_4:77036742-77036761 Msa0523600:CDS 45.0%
ACTACTTGGAATGAAGCCTG+GGG + chr3_4:77036744-77036763 Msa0523600:CDS 45.0%
ACAGGGAAGAAATGGCACAT+AGG - chr3_4:77036775-77036794 None:intergenic 45.0%
CGTGCTTTACAGGGAAGAAA+TGG - chr3_4:77036783-77036802 None:intergenic 45.0%
TCCCTGTAAAGCACGTTCTA+TGG + chr3_4:77036788-77036807 Msa0523600:CDS 45.0%
CCCATAGAACGTGCTTTACA+GGG - chr3_4:77036792-77036811 None:intergenic 45.0%
CCCTGTAAAGCACGTTCTAT+GGG + chr3_4:77036789-77036808 Msa0523600:CDS 45.0%
! ATCAGCCTTACCTTGATGGC+TGG + chr3_4:77034874-77034893 Msa0523600:CDS 50.0%
GGTAAGCCTGATTGAGGTTG+TGG - chr3_4:77035412-77035431 None:intergenic 50.0%
! ATCAGGCTTACCTTGATGGC+TGG + chr3_4:77035420-77035439 Msa0523600:CDS 50.0%
ACTCGATTGGAGTTGTGGGT+GGG - chr3_4:77035476-77035495 None:intergenic 50.0%
AACTCGATTGGAGTTGTGGG+TGG - chr3_4:77035477-77035496 None:intergenic 50.0%
CATCTTTCAGCCAGCCATCA+AGG - chr3_4:77035571-77035590 None:intergenic 50.0%
! GGTAGTTGCGACTTGGAGAA+AGG - chr3_4:77036280-77036299 None:intergenic 50.0%
! AAGGCTTGGTAGTTGCGACT+TGG - chr3_4:77036287-77036306 None:intergenic 50.0%
CTCACAAACGATTCTCCCCA+AGG + chr3_4:77036322-77036341 Msa0523600:CDS 50.0%
! GCTTTGGTCTCCCCTTTTGT+GGG - chr3_4:77036388-77036407 None:intergenic 50.0%
!! AGCTTTGGTCTCCCCTTTTG+TGG - chr3_4:77036389-77036408 None:intergenic 50.0%
CAAACGTGCACCTGATGTTG+TGG - chr3_4:77036500-77036519 None:intergenic 50.0%
GGGTGACAAGCTACCCATTT+AGG - chr3_4:77036565-77036584 None:intergenic 50.0%
! AATGGGTAGCTTGTCACCCT+AGG + chr3_4:77036566-77036585 Msa0523600:CDS 50.0%
GAGCATAAGGGTAAGGCCTA+GGG - chr3_4:77036585-77036604 None:intergenic 50.0%
AGAGCATAAGGGTAAGGCCT+AGG - chr3_4:77036586-77036605 None:intergenic 50.0%
TCATGTCAGACGTGTCTAGG+TGG - chr3_4:77036702-77036721 None:intergenic 50.0%
GCCCATAGAACGTGCTTTAC+AGG - chr3_4:77036793-77036812 None:intergenic 50.0%
! ATCAGCCTTACCTTGATGGC+TGG + chr3_4:77034874-77034893 Msa0523600:CDS 50.0%
GGTAAGCCTGATTGAGGTTG+TGG - chr3_4:77035412-77035431 None:intergenic 50.0%
! ATCAGGCTTACCTTGATGGC+TGG + chr3_4:77035420-77035439 Msa0523600:CDS 50.0%
ACTCGATTGGAGTTGTGGGT+GGG - chr3_4:77035476-77035495 None:intergenic 50.0%
AACTCGATTGGAGTTGTGGG+TGG - chr3_4:77035477-77035496 None:intergenic 50.0%
CATCTTTCAGCCAGCCATCA+AGG - chr3_4:77035571-77035590 None:intergenic 50.0%
! GGTAGTTGCGACTTGGAGAA+AGG - chr3_4:77036280-77036299 None:intergenic 50.0%
! AAGGCTTGGTAGTTGCGACT+TGG - chr3_4:77036287-77036306 None:intergenic 50.0%
CTCACAAACGATTCTCCCCA+AGG + chr3_4:77036322-77036341 Msa0523600:CDS 50.0%
! GCTTTGGTCTCCCCTTTTGT+GGG - chr3_4:77036388-77036407 None:intergenic 50.0%
!! AGCTTTGGTCTCCCCTTTTG+TGG - chr3_4:77036389-77036408 None:intergenic 50.0%
CAAACGTGCACCTGATGTTG+TGG - chr3_4:77036500-77036519 None:intergenic 50.0%
GGGTGACAAGCTACCCATTT+AGG - chr3_4:77036565-77036584 None:intergenic 50.0%
! AATGGGTAGCTTGTCACCCT+AGG + chr3_4:77036566-77036585 Msa0523600:CDS 50.0%
GAGCATAAGGGTAAGGCCTA+GGG - chr3_4:77036585-77036604 None:intergenic 50.0%
AGAGCATAAGGGTAAGGCCT+AGG - chr3_4:77036586-77036605 None:intergenic 50.0%
TCATGTCAGACGTGTCTAGG+TGG - chr3_4:77036702-77036721 None:intergenic 50.0%
GCCCATAGAACGTGCTTTAC+AGG - chr3_4:77036793-77036812 None:intergenic 50.0%
TGGCACATAGGAGCTTCCCC+AGG - chr3_4:77036763-77036782 None:intergenic 60.0%
TGGCACATAGGAGCTTCCCC+AGG - chr3_4:77036763-77036782 None:intergenic 60.0%
ATGGGCACCACTCCCACCAG+AGG + chr3_4:77036807-77036826 Msa0523600:CDS 65.0%
! TTGGTGGCCTCTGGTGGGAG+TGG - chr3_4:77036817-77036836 None:intergenic 65.0%
ATGGGCACCACTCCCACCAG+AGG + chr3_4:77036807-77036826 Msa0523600:CDS 65.0%
! TTGGTGGCCTCTGGTGGGAG+TGG - chr3_4:77036817-77036836 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 77034834 77036840 77034834 ID=Msa0523600;Name=Msa0523600
chr3_4 mRNA 77034834 77036840 77034834 ID=Msa0523600-mRNA-1;Parent=Msa0523600;Name=Msa0523600-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|-1|0|1|-1|1|1|0|668
chr3_4 exon 77034834 77036840 77034834 ID=Msa0523600-mRNA-1:exon:22506;Parent=Msa0523600-mRNA-1
chr3_4 CDS 77034834 77036840 77034834 ID=Msa0523600-mRNA-1:cds;Parent=Msa0523600-mRNA-1
Gene Sequence

>Msa0523600

ATGAAGCTTCAGCACGAGAATGTAGAAGAAAAACAAGTTGATCAGCCTTACCTTGATGGCTGGCTTAAAAACAGTCCACTGAAGAACAAAAAACTAAACTCTAATCCAAGTTATCTTGATGGATGGTTGAAAGATGCTCCCGAAGAAAACAAAAAAGCTATCCACAACACCAATCAAGTTTACCTAGATGGATGGTTGAAAGATACCAAGAATCAAAAGGAAAAGACTACCCACGACTCCAATCAAGTTTACCTAGATGGATGGTTAAAGGATACCCAAGTTCAAAAAACAAAATCCACCCCTAACTCCAATCAAGTTTACCTTGACGGATGGCTAAAAGATACCCAAGTTGAGAAAGCAAAATTCATCCCTAACTCTAATCAAGTTTACCTTGATGGATGGTTGAAAGATAGCCAAGATGAGAAAGCAAAATCGACCCCAAACTCCAACCAAGTTTATCTTGACGGGTGGTTGAAAGATAGCCATGCTGAGAAAGAAAAATCCAACCCTAACTACAATCAAGTTTACCTTGATGGCTGGTTGAAAGACACCAAAGATCAAAAGGAAAAAACTATCCACAACCTCAATCAGGCTTACCTTGATGGCTGGTTAAAAGATAGTCGGGTTGAGAGAGCAAAACCCACCCACAACTCCAATCGAGTTTATCTTGATGGATGGTTGAAAGATAGCCATGTTGAGAAAGAAAAATCCACCCCTAACTCCAATCAAGTTTACCTTGATGGCTGGCTGAAAGATGCCCAACTTGAGAAAGCAAAATCAACCCCAAACTTCAATCAAGTTTATCTTGATGGATGGTTGAAAGATAGCCAAGTTGAGCAAGGAAAATCCACTCCTAACTCCAATCAAGTTTACCTTGATGGATGGTTGAAAGATAGCCAAGTTGAGAAGGCAAGATCAACCCCAAACTCCAACCAAGTTTATCTTGATGGATGGTTGAAAGATGGCCAAGTTGAGAAAGCAAGATCGACCCCAAACTCCAATCAAGTTTATCTTGATGGATGGTTGAAAGATAGCCAAGTTGAGAAAGCAAGATCGACCCCAAACTCTAATCAAGTTTATCTTGATGGATGGTTGAAAGATGGCCAAGTTGAGCAAGTAAAATCCACCCCTAACTCCAATCAAGTTTACCTTGATGGATGGTTGAAAGATACCAAGGATCAAATGGAAAAACCAATACACAACCTCAATCAGGCTTACCTTGATGGTTGGTTGAAAGACTCGCATGCAGCGAACTCCATGAAGAAAATTGGACAAGACATGGCAGAATCAAAAGGGAAACCATCTTCAAAAGTTGACCATACAAAGGCATTCAAGTTAGCTTTTTTCACTATGGATGATCTTTATGTAGGGAACGTAATGACACTGCAATTTCCTATCAGAGAATATGCTAACTTCTTGCCAAAAAAAGTAGCTGACTACATTCCTTTCTCCAAGTCGCAACTACCAAGCCTTCTTCAACTATTCTCTCTCACAAACGATTCTCCCCAAGGTGAAGACATGAAAGACATAATTGATCAATGTGAATTTGAACCCACAAAAGGGGAGACCAAAGCTTGTCCTACTTCATTAGAGTCCATGCTTGAATTTGTTCATAGTGTTCTTGGTACTGAGACCAAATATAACATTCACACAACTAGCTATCCCACAACATCAGGTGCACGTTTGCAGAACTACACCATTTTGGAAATCTCAAAGGATATCTATGCTCCTAAATGGGTAGCTTGTCACCCTAGGCCTTACCCTTATGCTCTTTACTACTGCCACTACCTAGACATAGGGAGTAAGGTCTTCAAAGTTCTTCTAAGGGGTCAATATGGAGACATAATGGATGCTTTGGGCATTTGCCACCTAGACACGTCTGACATGAATCCTAATCATTTTATATTTCAACTACTTGGAATGAAGCCTGGGGAAGCTCCTATGTGCCATTTCTTCCCTGTAAAGCACGTTCTATGGGCACCACTCCCACCAGAGGCCACCAACTGA
Protein sequence

>Msa0523600

MKLQHENVEEKQVDQPYLDGWLKNSPLKNKKLNSNPSYLDGWLKDAPEENKKAIHNTNQVYLDGWLKDTKNQKEKTTHDSNQVYLDGWLKDTQVQKTKSTPNSNQVYLDGWLKDTQVEKAKFIPNSNQVYLDGWLKDSQDEKAKSTPNSNQVYLDGWLKDSHAEKEKSNPNYNQVYLDGWLKDTKDQKEKTIHNLNQAYLDGWLKDSRVERAKPTHNSNRVYLDGWLKDSHVEKEKSTPNSNQVYLDGWLKDAQLEKAKSTPNFNQVYLDGWLKDSQVEQGKSTPNSNQVYLDGWLKDSQVEKARSTPNSNQVYLDGWLKDGQVEKARSTPNSNQVYLDGWLKDSQVEKARSTPNSNQVYLDGWLKDGQVEQVKSTPNSNQVYLDGWLKDTKDQMEKPIHNLNQAYLDGWLKDSHAANSMKKIGQDMAESKGKPSSKVDHTKAFKLAFFTMDDLYVGNVMTLQFPIREYANFLPKKVADYIPFSKSQLPSLLQLFSLTNDSPQGEDMKDIIDQCEFEPTKGETKACPTSLESMLEFVHSVLGTETKYNIHTTSYPTTSGARLQNYTILEISKDIYAPKWVACHPRPYPYALYYCHYLDIGSKVFKVLLRGQYGDIMDALGICHLDTSDMNPNHFIFQLLGMKPGEAPMCHFFPVKHVLWAPLPPEATN*