Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1419320 | sp|Q9SYY4|ELO3L_ARATH | 63.861 | 202 | 71 | 2 | 1 | 200 | 78 | 279 | 5.48e-90 | 269 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1419320 | A0A396JM73 | 85.047 | 214 | 3 | 1 | 1 | 214 | 77 | 261 | 2.34e-122 | 356 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011010 | Msa1419320 | 0.801038 | 1.087070e-48 | -8.615850e-47 |
| Msa0011040 | Msa1419320 | 0.810760 | 9.822153e-51 | -8.615850e-47 |
| Msa0013270 | Msa1419320 | 0.822936 | 1.814218e-53 | -8.615850e-47 |
| Msa0024650 | Msa1419320 | 0.819189 | 1.323358e-52 | -8.615850e-47 |
| Msa0025570 | Msa1419320 | 0.810710 | 1.006896e-50 | -8.615850e-47 |
| Msa0045810 | Msa1419320 | 0.804625 | 1.974560e-49 | -8.615850e-47 |
| Msa0046200 | Msa1419320 | 0.800304 | 1.534792e-48 | -8.615850e-47 |
| Msa0048380 | Msa1419320 | 0.809154 | 2.177435e-50 | -8.615850e-47 |
| Msa0051910 | Msa1419320 | 0.808651 | 2.789795e-50 | -8.615850e-47 |
| Msa0054610 | Msa1419320 | 0.913357 | 6.756325e-84 | -8.615850e-47 |
| Msa0062190 | Msa1419320 | 0.810347 | 1.205753e-50 | -8.615850e-47 |
| Msa0073110 | Msa1419320 | 0.814605 | 1.414657e-51 | -8.615850e-47 |
| Msa0101380 | Msa1419320 | 0.923787 | 1.675483e-89 | -8.615850e-47 |
| Msa0106540 | Msa1419320 | 0.805295 | 1.430215e-49 | -8.615850e-47 |
| Msa0120450 | Msa1419320 | 0.809257 | 2.068748e-50 | -8.615850e-47 |
| Msa1361980 | Msa1419320 | 0.800980 | 1.117104e-48 | -8.615850e-47 |
| Msa1366480 | Msa1419320 | 0.804448 | 2.149441e-49 | -8.615850e-47 |
| Msa1405830 | Msa1419320 | 0.804653 | 1.948708e-49 | -8.615850e-47 |
| Msa1413150 | Msa1419320 | 0.800354 | 1.499423e-48 | -8.615850e-47 |
| Msa1419320 | Msa1455360 | 0.803719 | 3.047501e-49 | -8.615850e-47 |
| Msa0604220 | Msa1419320 | 0.809576 | 1.767330e-50 | -8.615850e-47 |
| Msa0615780 | Msa1419320 | 0.809924 | 1.487982e-50 | -8.615850e-47 |
| Msa0647300 | Msa1419320 | 0.805234 | 1.472799e-49 | -8.615850e-47 |
| Msa0682110 | Msa1419320 | 0.807267 | 5.493416e-50 | -8.615850e-47 |
| Msa0682160 | Msa1419320 | 0.815428 | 9.291638e-52 | -8.615850e-47 |
| Msa0686830 | Msa1419320 | 0.806299 | 8.798319e-50 | -8.615850e-47 |
| Msa0694320 | Msa1419320 | 0.811567 | 6.564317e-51 | -8.615850e-47 |
| Msa0699170 | Msa1419320 | 0.807975 | 3.886068e-50 | -8.615850e-47 |
| Msa0707330 | Msa1419320 | 0.819876 | 9.223582e-53 | -8.615850e-47 |
| Msa0731580 | Msa1419320 | 0.827704 | 1.350568e-54 | -8.615850e-47 |
| Msa0733560 | Msa1419320 | 0.853508 | 2.281357e-61 | -8.615850e-47 |
| Msa0789780 | Msa1419320 | 0.807420 | 5.100303e-50 | -8.615850e-47 |
| Msa0809920 | Msa1419320 | 0.801083 | 1.064161e-48 | -8.615850e-47 |
| Msa0812220 | Msa1419320 | 0.803877 | 2.826140e-49 | -8.615850e-47 |
| Msa0829990 | Msa1419320 | 0.807831 | 4.170144e-50 | -8.615850e-47 |
| Msa0125860 | Msa1419320 | 0.803311 | 3.703430e-49 | -8.615850e-47 |
| Msa0145640 | Msa1419320 | 0.912782 | 1.312268e-83 | -8.615850e-47 |
| Msa0163690 | Msa1419320 | 0.808135 | 3.592976e-50 | -8.615850e-47 |
| Msa0193680 | Msa1419320 | 0.812865 | 3.418167e-51 | -8.615850e-47 |
| Msa1254870 | Msa1419320 | 0.805736 | 1.156082e-49 | -8.615850e-47 |
| Msa1263110 | Msa1419320 | 0.822739 | 2.016243e-53 | -8.615850e-47 |
| Msa1328430 | Msa1419320 | 0.804639 | 1.961265e-49 | -8.615850e-47 |
| Msa0390160 | Msa1419320 | 0.810496 | 1.119675e-50 | -8.615850e-47 |
| Msa0390170 | Msa1419320 | 0.804881 | 1.745847e-49 | -8.615850e-47 |
| Msa0393100 | Msa1419320 | 0.809607 | 1.740381e-50 | -8.615850e-47 |
| Msa0405200 | Msa1419320 | 0.811743 | 6.010169e-51 | -8.615850e-47 |
| Msa0444380 | Msa1419320 | 0.808768 | 2.633596e-50 | -8.615850e-47 |
| Msa0457070 | Msa1419320 | -0.803736 | 3.022858e-49 | -8.615850e-47 |
| Msa0478080 | Msa1419320 | 0.804377 | 2.224842e-49 | -8.615850e-47 |
| Msa1001120 | Msa1419320 | 0.806343 | 8.614405e-50 | -8.615850e-47 |
| Msa1003920 | Msa1419320 | 0.800829 | 1.199357e-48 | -8.615850e-47 |
| Msa1029860 | Msa1419320 | 0.813327 | 2.706832e-51 | -8.615850e-47 |
| Msa1030210 | Msa1419320 | 0.800162 | 1.640087e-48 | -8.615850e-47 |
| Msa1041250 | Msa1419320 | 0.810511 | 1.111463e-50 | -8.615850e-47 |
| Msa1060750 | Msa1419320 | 0.807096 | 5.973918e-50 | -8.615850e-47 |
| Msa1069250 | Msa1419320 | 0.805151 | 1.532817e-49 | -8.615850e-47 |
| Msa1075090 | Msa1419320 | 0.809524 | 1.813243e-50 | -8.615850e-47 |
| Msa1082080 | Msa1419320 | 0.802146 | 6.443663e-49 | -8.615850e-47 |
| Msa0265650 | Msa1419320 | 0.801287 | 9.670243e-49 | -8.615850e-47 |
| Msa0274570 | Msa1419320 | 0.803374 | 3.594572e-49 | -8.615850e-47 |
| Msa0316230 | Msa1419320 | 0.802451 | 5.576608e-49 | -8.615850e-47 |
| Msa0318490 | Msa1419320 | 0.817861 | 2.646691e-52 | -8.615850e-47 |
| Msa0345890 | Msa1419320 | 0.820431 | 6.882942e-53 | -8.615850e-47 |
| Msa0345980 | Msa1419320 | 0.820703 | 5.962956e-53 | -8.615850e-47 |
| Msa0346170 | Msa1419320 | 0.800230 | 1.588705e-48 | -8.615850e-47 |
| Msa1108560 | Msa1419320 | 0.820714 | 5.928817e-53 | -8.615850e-47 |
| Msa1115980 | Msa1419320 | 0.818882 | 1.554174e-52 | -8.615850e-47 |
| Msa1120580 | Msa1419320 | 0.802739 | 4.862658e-49 | -8.615850e-47 |
| Msa1137750 | Msa1419320 | 0.815444 | 9.216425e-52 | -8.615850e-47 |
| Msa1150760 | Msa1419320 | 0.800313 | 1.527903e-48 | -8.615850e-47 |
| Msa1156740 | Msa1419320 | 0.802412 | 5.680468e-49 | -8.615850e-47 |
| Msa1157110 | Msa1419320 | 0.801966 | 7.015182e-49 | -8.615850e-47 |
| Msa1162430 | Msa1419320 | 0.814687 | 1.356737e-51 | -8.615850e-47 |
| Msa1174280 | Msa1419320 | 0.817479 | 3.228073e-52 | -8.615850e-47 |
| Msa1181090 | Msa1419320 | 0.803063 | 4.168178e-49 | -8.615850e-47 |
| Msa1202110 | Msa1419320 | 0.802427 | 5.638956e-49 | -8.615850e-47 |
| Msa1223710 | Msa1419320 | 0.801553 | 8.528664e-49 | -8.615850e-47 |
| Msa1223960 | Msa1419320 | 0.801749 | 7.772838e-49 | -8.615850e-47 |
| Msa1223990 | Msa1419320 | 0.809997 | 1.434884e-50 | -8.615850e-47 |
| Msa0488580 | Msa1419320 | 0.820447 | 6.826058e-53 | -8.615850e-47 |
| Msa0497680 | Msa1419320 | 0.803478 | 3.420520e-49 | -8.615850e-47 |
| Msa0522140 | Msa1419320 | 0.801389 | 9.213627e-49 | -8.615850e-47 |
| Msa0522170 | Msa1419320 | 0.802283 | 6.037989e-49 | -8.615850e-47 |
| Msa0556270 | Msa1419320 | 0.816502 | 5.350834e-52 | -8.615850e-47 |
| Msa0567330 | Msa1419320 | 0.800140 | 1.657350e-48 | -8.615850e-47 |
| Msa0850480 | Msa1419320 | 0.800182 | 1.625028e-48 | -8.615850e-47 |
| Msa0921790 | Msa1419320 | 0.816170 | 6.348640e-52 | -8.615850e-47 |
| Msa0960580 | Msa1419320 | 0.807653 | 4.549930e-50 | -8.615850e-47 |
| Msa0967780 | Msa1419320 | 0.802748 | 4.842177e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1419320 | MtrunA17_Chr1g0154571 | 85.047 | 214 | 3 | 1 | 1 | 214 | 77 | 261 | 4.51e-126 | 356 |
| Msa1419320 | MtrunA17_Chr3g0141331 | 70.755 | 212 | 60 | 1 | 1 | 212 | 83 | 292 | 9.70e-105 | 304 |
| Msa1419320 | MtrunA17_Chr5g0403531 | 60.870 | 207 | 80 | 1 | 1 | 207 | 80 | 285 | 1.11e-85 | 255 |
| Msa1419320 | MtrunA17_Chr8g0373641 | 61.881 | 202 | 74 | 2 | 1 | 200 | 85 | 285 | 1.51e-84 | 253 |
| Msa1419320 | MtrunA17_Chr7g0273031 | 35.057 | 174 | 105 | 3 | 39 | 204 | 101 | 274 | 2.11e-28 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1419320 | AT4G36830.1 | 63.861 | 202 | 71 | 2 | 1 | 200 | 78 | 279 | 5.57e-91 | 269 |
| Msa1419320 | AT1G75000.1 | 65.854 | 205 | 67 | 2 | 1 | 202 | 76 | 280 | 3.42e-89 | 264 |
| Msa1419320 | AT4G36830.2 | 66.298 | 181 | 59 | 2 | 1 | 179 | 78 | 258 | 3.18e-84 | 252 |
| Msa1419320 | AT3G06460.1 | 33.140 | 172 | 104 | 4 | 39 | 205 | 105 | 270 | 1.45e-23 | 95.9 |
| Msa1419320 | AT3G06470.1 | 29.947 | 187 | 114 | 5 | 29 | 202 | 95 | 277 | 4.02e-23 | 94.4 |
Find 32 sgRNAs with CRISPR-Local
Find 56 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAATTTGGTTTGTCATTT+TGG | 0.099853 | tig0024705:+3220 | Msa1419320:CDS |
| TTGGTTTATTGTTTGGTTTA+TGG | 0.193155 | tig0024705:+3118 | Msa1419320:CDS |
| TGGTTTATGGCTATAGATTT+TGG | 0.209259 | tig0024705:+3131 | Msa1419320:CDS |
| CTCGACTTTGGTTTATTGTT+TGG | 0.257456 | tig0024705:+3111 | Msa1419320:CDS |
| AGGTGCTATTGTTCTTCTTT+TGG | 0.268883 | tig0024705:-3363 | None:intergenic |
| GGTGTAATGGAATTGGAGCT+TGG | 0.382997 | tig0024705:+3272 | Msa1419320:CDS |
| AGAGGTGGGTGTAATGGAAT+TGG | 0.394775 | tig0024705:+3265 | Msa1419320:CDS |
| GTGTAATGGAATTGGAGCTT+GGG | 0.420847 | tig0024705:+3273 | Msa1419320:CDS |
| CCACTTGGTATGCGTCCATC+TGG | 0.425938 | tig0024705:+2902 | Msa1419320:CDS |
| TTGATCAGATGTACTACTAT+AGG | 0.432647 | tig0024705:-3383 | None:intergenic |
| AAACAAAGGAACCATTCAAA+AGG | 0.452719 | tig0024705:-2878 | None:intergenic |
| AAAATGAGAGTTTCCGTTGA+CGG | 0.478008 | tig0024705:-3000 | None:intergenic |
| AAAAGAACTGATCAAGAGAA+TGG | 0.488684 | tig0024705:-3041 | None:intergenic |
| TGGTTCCTTTGTTTCCCACT+TGG | 0.489824 | tig0024705:+2887 | Msa1419320:CDS |
| AACAAAGGAACCATTCAAAA+GGG | 0.499822 | tig0024705:-2877 | None:intergenic |
| TTGGCAATGAACATTGACAT+AGG | 0.540007 | tig0024705:-3344 | None:intergenic |
| TCTTTGTCATTCTCCGTCAA+CGG | 0.544484 | tig0024705:+2987 | Msa1419320:CDS |
| ACGACACACGGTGGCTACTC+CGG | 0.551699 | tig0024705:+2840 | Msa1419320:CDS |
| GGAGTAGCCACCGTGTGTCG+TGG | 0.569741 | tig0024705:-2838 | None:intergenic |
| CAGAAGAAAACACGACCAGA+TGG | 0.581311 | tig0024705:-2917 | None:intergenic |
| CTGCAGAACTCCACGACACA+CGG | 0.598573 | tig0024705:+2828 | Msa1419320:CDS |
| GTCGTGGAGTTCTGCAGCCG+CGG | 0.601574 | tig0024705:-2822 | None:intergenic |
| GCATACCAAGTGGGAAACAA+AGG | 0.605927 | tig0024705:-2892 | None:intergenic |
| TTGACGGAGAATGACAAAGA+AGG | 0.617040 | tig0024705:-2984 | None:intergenic |
| AGCCGCGGAGAATAGCATGC+CGG | 0.623890 | tig0024705:-2807 | None:intergenic |
| CATGCCGGAGAAAATTGTGA+TGG | 0.634231 | tig0024705:-2792 | None:intergenic |
| CCAGATGGACGCATACCAAG+TGG | 0.648526 | tig0024705:-2902 | None:intergenic |
| ACAAAGGAACCATTCAAAAG+GGG | 0.655501 | tig0024705:-2876 | None:intergenic |
| ACAAATGAAGAAACCTTGAG+AGG | 0.668969 | tig0024705:-2955 | None:intergenic |
| CAGATGGACGCATACCAAGT+GGG | 0.681279 | tig0024705:-2901 | None:intergenic |
| CTCCGGCATGCTATTCTCCG+CGG | 0.683685 | tig0024705:+2805 | Msa1419320:CDS |
| CAGAACTCCACGACACACGG+TGG | 0.748763 | tig0024705:+2831 | Msa1419320:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAGATTTTGGATTGAAAT+TGG | + | tig0024705:3142-3161 | Msa1419320:CDS | 20.0% |
| !!! | ATAGATTTTGGATTGAAATT+GGG | + | tig0024705:3143-3162 | Msa1419320:CDS | 20.0% |
| !! | GTGAAATAAAAATTCTTACT+TGG | - | tig0024705:3172-3191 | None:intergenic | 20.0% |
| !!! | AATTGTCAAATGATTTTGTT+GGG | + | tig0024705:3196-3215 | Msa1419320:CDS | 20.0% |
| !! | TTGGTTTATTGTTTGGTTTA+TGG | + | tig0024705:3118-3137 | Msa1419320:CDS | 25.0% |
| !! | GAATTGTCAAATGATTTTGT+TGG | + | tig0024705:3195-3214 | Msa1419320:CDS | 25.0% |
| !!! | TGTAATTTGGTTTGTCATTT+TGG | + | tig0024705:3220-3239 | Msa1419320:CDS | 25.0% |
| AACAAAGGAACCATTCAAAA+GGG | - | tig0024705:2880-2899 | None:intergenic | 30.0% | |
| AAACAAAGGAACCATTCAAA+AGG | - | tig0024705:2881-2900 | None:intergenic | 30.0% | |
| ! | CTTATATTTTCTACCTCTCA+AGG | + | tig0024705:2942-2961 | Msa1419320:CDS | 30.0% |
| AAAAGAACTGATCAAGAGAA+TGG | - | tig0024705:3044-3063 | None:intergenic | 30.0% | |
| ! | TCTTGATCAGTTCTTTTCTA+TGG | + | tig0024705:3047-3066 | Msa1419320:CDS | 30.0% |
| ! | TGAATTTTCACAGTCTTTTC+AGG | + | tig0024705:3072-3091 | Msa1419320:CDS | 30.0% |
| ! | TGGTTTATGGCTATAGATTT+TGG | + | tig0024705:3131-3150 | Msa1419320:CDS | 30.0% |
| !! | GATTTTGTTGGGTTGTAATT+TGG | + | tig0024705:3207-3226 | Msa1419320:CDS | 30.0% |
| TTGATCAGATGTACTACTAT+AGG | - | tig0024705:3386-3405 | None:intergenic | 30.0% | |
| ! | ATCTCCATCACAATTTTCTC+CGG | + | tig0024705:2788-2807 | Msa1419320:CDS | 35.0% |
| ! | CTAAAACTACCCCTTTTGAA+TGG | + | tig0024705:2867-2886 | Msa1419320:CDS | 35.0% |
| ACAAAGGAACCATTCAAAAG+GGG | - | tig0024705:2879-2898 | None:intergenic | 35.0% | |
| ACAAATGAAGAAACCTTGAG+AGG | - | tig0024705:2958-2977 | None:intergenic | 35.0% | |
| AAAATGAGAGTTTCCGTTGA+CGG | - | tig0024705:3003-3022 | None:intergenic | 35.0% | |
| !! | AACGGAAACTCTCATTTTTC+AGG | + | tig0024705:3005-3024 | Msa1419320:CDS | 35.0% |
| ! | CTCGACTTTGGTTTATTGTT+TGG | + | tig0024705:3111-3130 | Msa1419320:CDS | 35.0% |
| !!! | TTTGTCATTTTGGTGTGCTT+TGG | + | tig0024705:3230-3249 | Msa1419320:CDS | 35.0% |
| TGACATAGGACTTCAAAAAG+AGG | - | tig0024705:3333-3352 | None:intergenic | 35.0% | |
| TTGGCAATGAACATTGACAT+AGG | - | tig0024705:3347-3366 | None:intergenic | 35.0% | |
| !!! | AGGTGCTATTGTTCTTCTTT+TGG | - | tig0024705:3366-3385 | None:intergenic | 35.0% |
| !!! | AAGGGGTAGTTTTAGTTCTC+CGG | - | tig0024705:2862-2881 | None:intergenic | 40.0% |
| TTGACGGAGAATGACAAAGA+AGG | - | tig0024705:2987-3006 | None:intergenic | 40.0% | |
| TCTTTGTCATTCTCCGTCAA+CGG | + | tig0024705:2987-3006 | Msa1419320:CDS | 40.0% | |
| !!! | TCACAGTCTTTTCAGGTTCT+TGG | + | tig0024705:3079-3098 | Msa1419320:CDS | 40.0% |
| !!! | CACAGTCTTTTCAGGTTCTT+GGG | + | tig0024705:3080-3099 | Msa1419320:CDS | 40.0% |
| ! | GTGTGCTTTGGTTGCATTTT+TGG | + | tig0024705:3242-3261 | Msa1419320:CDS | 40.0% |
| !! | CTTTGGTTGCATTTTTGGAG+AGG | + | tig0024705:3247-3266 | Msa1419320:CDS | 40.0% |
| ! | GTGTAATGGAATTGGAGCTT+GGG | + | tig0024705:3273-3292 | Msa1419320:CDS | 40.0% |
| CATGCCGGAGAAAATTGTGA+TGG | - | tig0024705:2795-2814 | None:intergenic | 45.0% | |
| ! | TGGTTCCTTTGTTTCCCACT+TGG | + | tig0024705:2887-2906 | Msa1419320:CDS | 45.0% |
| GCATACCAAGTGGGAAACAA+AGG | - | tig0024705:2895-2914 | None:intergenic | 45.0% | |
| CAGAAGAAAACACGACCAGA+TGG | - | tig0024705:2920-2939 | None:intergenic | 45.0% | |
| ! | CATCTGGTCGTGTTTTCTTC+TGG | + | tig0024705:2918-2937 | Msa1419320:CDS | 45.0% |
| ! | TGGGATTTTGCTCTCGACTT+TGG | + | tig0024705:3099-3118 | Msa1419320:CDS | 45.0% |
| !! | TGGTTGCATTTTTGGAGAGG+TGG | + | tig0024705:3250-3269 | Msa1419320:CDS | 45.0% |
| !! | GGTTGCATTTTTGGAGAGGT+GGG | + | tig0024705:3251-3270 | Msa1419320:CDS | 45.0% |
| !! | TTTTGGAGAGGTGGGTGTAA+TGG | + | tig0024705:3259-3278 | Msa1419320:CDS | 45.0% |
| ! | AGAGGTGGGTGTAATGGAAT+TGG | + | tig0024705:3265-3284 | Msa1419320:CDS | 45.0% |
| ! | GGTGTAATGGAATTGGAGCT+TGG | + | tig0024705:3272-3291 | Msa1419320:CDS | 45.0% |
| CAGATGGACGCATACCAAGT+GGG | - | tig0024705:2904-2923 | None:intergenic | 50.0% | |
| CTGCAGAACTCCACGACACA+CGG | + | tig0024705:2828-2847 | Msa1419320:CDS | 55.0% | |
| CCAGATGGACGCATACCAAG+TGG | - | tig0024705:2905-2924 | None:intergenic | 55.0% | |
| CCACTTGGTATGCGTCCATC+TGG | + | tig0024705:2902-2921 | Msa1419320:CDS | 55.0% | |
| CTCCGGCATGCTATTCTCCG+CGG | + | tig0024705:2805-2824 | Msa1419320:CDS | 60.0% | |
| AGCCGCGGAGAATAGCATGC+CGG | - | tig0024705:2810-2829 | None:intergenic | 60.0% | |
| CAGAACTCCACGACACACGG+TGG | + | tig0024705:2831-2850 | Msa1419320:CDS | 60.0% | |
| ACGACACACGGTGGCTACTC+CGG | + | tig0024705:2840-2859 | Msa1419320:CDS | 60.0% | |
| GTCGTGGAGTTCTGCAGCCG+CGG | - | tig0024705:2825-2844 | None:intergenic | 65.0% | |
| GGAGTAGCCACCGTGTGTCG+TGG | - | tig0024705:2841-2860 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024705 | gene | 2779 | 3423 | 2779 | ID=Msa1419320;Name=Msa1419320 |
| tig0024705 | mRNA | 2779 | 3423 | 2779 | ID=Msa1419320-mRNA-1;Parent=Msa1419320;Name=Msa1419320-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|-1|0|1|-1|1|1|0|214 |
| tig0024705 | exon | 2779 | 3423 | 2779 | ID=Msa1419320-mRNA-1:exon:833;Parent=Msa1419320-mRNA-1 |
| tig0024705 | CDS | 2779 | 3423 | 2779 | ID=Msa1419320-mRNA-1:cds;Parent=Msa1419320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
