AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1064420


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1064420 MtrunA17_Chr7g0243861 85.282 496 41 1 3 466 6 501 0.0 847
Msa1064420 MtrunA17_Chr7g0243931 82.530 498 55 1 1 466 7 504 0.0 838
Msa1064420 MtrunA17_Chr7g0243951 81.124 498 61 2 1 466 1 497 0.0 817
Msa1064420 MtrunA17_Chr7g0243851 82.189 466 73 2 1 466 1 456 0.0 778
Msa1064420 MtrunA17_Chr4g0060511 72.455 501 103 2 1 466 1 501 0.0 728
Msa1064420 MtrunA17_Chr7g0243681 69.880 498 111 4 1 465 1 492 0.0 711
Msa1064420 MtrunA17_Chr7g0243631 70.624 497 112 3 3 466 5 500 0.0 708
Msa1064420 MtrunA17_Chr7g0243771 69.547 486 112 2 8 461 3 484 0.0 695
Msa1064420 MtrunA17_Chr7g0243801 69.371 493 111 3 1 461 1 485 0.0 694
Msa1064420 MtrunA17_Chr7g0235051 73.291 468 122 2 1 466 1 467 0.0 673
Msa1064420 MtrunA17_Chr7g0243761 67.671 498 99 3 1 466 1 468 0.0 634
Msa1064420 MtrunA17_Chr7g0243871 62.910 488 139 2 4 459 2 479 0.0 616
Msa1064420 MtrunA17_Chr7g0243781 62.222 495 144 3 4 464 2 487 0.0 606
Msa1064420 MtrunA17_Chr5g0401851 49.899 493 205 4 5 460 4 491 8.37e-171 489
Msa1064420 MtrunA17_Chr7g0243811 60.298 403 124 2 23 398 1 394 5.22e-165 471
Msa1064420 MtrunA17_Chr8g0355221 50.513 487 197 7 10 459 14 493 1.02e-162 469
Msa1064420 MtrunA17_Chr1g0165701 49.899 495 195 9 10 464 14 495 3.96e-159 460
Msa1064420 MtrunA17_Chr5g0416741 49.897 485 200 5 8 456 10 487 4.60e-159 459
Msa1064420 MtrunA17_Chr6g0463891 49.281 487 210 6 10 462 11 494 8.96e-158 456
Msa1064420 MtrunA17_Chr7g0243711 80.435 276 50 2 194 466 56 330 7.18e-157 447
Msa1064420 MtrunA17_Chr7g0243711 82.278 79 14 0 1 79 1 79 3.84e-37 139
Msa1064420 MtrunA17_Chr7g0243611 67.677 297 77 2 126 404 1 296 2.70e-144 414
Msa1064420 MtrunA17_Chr5g0416821 45.418 491 210 8 10 462 13 483 1.19e-142 417
Msa1064420 MtrunA17_Chr8g0366391 41.968 498 236 11 7 464 5 489 2.93e-121 363
Msa1064420 MtrunA17_Chr4g0044511 42.236 483 232 11 7 454 36 506 2.47e-119 358
Msa1064420 MtrunA17_Chr4g0044501 41.752 491 237 10 1 455 1 478 9.93e-117 351
Msa1064420 MtrunA17_Chr4g0066201 41.513 489 243 10 1 460 8 482 4.38e-115 347
Msa1064420 MtrunA17_Chr4g0066281 42.373 472 237 9 14 461 15 475 9.38e-114 343
Msa1064420 MtrunA17_Chr4g0066261 41.803 488 241 13 9 461 11 490 1.52e-113 343
Msa1064420 MtrunA17_Chr4g0066151 42.437 476 238 10 12 459 19 486 3.82e-113 342
Msa1064420 MtrunA17_Chr7g0243911 77.451 204 46 0 234 437 12 215 2.80e-112 330
Msa1064420 MtrunA17_Chr4g0014061 38.413 479 263 7 10 461 8 481 1.25e-111 338
Msa1064420 MtrunA17_Chr4g0066221 40.329 486 250 10 9 461 11 489 6.99e-110 333
Msa1064420 MtrunA17_Chr4g0066171 40.204 490 249 8 1 461 11 485 9.86e-110 333
Msa1064420 MtrunA17_Chr4g0066131 41.423 478 244 9 12 461 14 483 5.82e-109 331
Msa1064420 MtrunA17_Chr4g0011051 38.057 494 251 10 9 456 7 491 7.68e-109 331
Msa1064420 MtrunA17_Chr5g0419771 39.192 495 248 10 6 456 31 516 1.47e-108 331
Msa1064420 MtrunA17_Chr4g0044521 41.372 481 232 13 8 455 6 469 3.51e-108 328
Msa1064420 MtrunA17_Chr7g0275681 39.834 482 245 9 7 452 8 480 1.28e-106 325
Msa1064420 MtrunA17_Chr8g0350881 40.083 484 253 7 10 461 11 489 1.71e-105 322
Msa1064420 MtrunA17_Chr8g0374901 40.166 483 252 8 9 461 12 487 6.92e-105 320
Msa1064420 MtrunA17_Chr8g0374971 39.792 480 252 7 14 461 15 489 3.54e-104 319
Msa1064420 MtrunA17_Chr1g0179901 35.984 503 269 11 1 459 7 500 2.03e-103 317
Msa1064420 MtrunA17_Chr6g0463861 40.625 480 240 13 9 456 11 477 5.26e-103 316
Msa1064420 MtrunA17_Chr7g0265041 40.927 496 241 14 1 452 1 488 2.50e-102 314
Msa1064420 MtrunA17_Chr5g0428081 39.104 491 244 10 9 459 11 486 7.49e-102 313
Msa1064420 MtrunA17_Chr4g0044481 46.094 384 191 8 11 385 27 403 4.84e-101 309
Msa1064420 MtrunA17_Chr7g0218311 39.113 496 240 10 9 461 16 492 6.17e-101 311
Msa1064420 MtrunA17_Chr8g0374941 40.580 483 248 10 9 459 949 1424 4.10e-100 327
Msa1064420 MtrunA17_Chr8g0374941 39.610 462 240 10 9 438 11 465 7.70e-92 304
Msa1064420 MtrunA17_Chr8g0374941 39.520 458 238 9 9 434 476 926 1.32e-85 286
Msa1064420 MtrunA17_Chr5g0419761 38.800 500 256 13 1 457 1 493 5.23e-100 308
Msa1064420 MtrunA17_Chr7g0265051 38.067 507 252 14 1 461 1 491 8.84e-99 305
Msa1064420 MtrunA17_Chr7g0265111 36.863 510 259 11 2 462 30 525 2.14e-98 305
Msa1064420 MtrunA17_Chr7g0265101 37.103 504 263 13 1 461 1 493 4.95e-98 303
Msa1064420 MtrunA17_Chr8g0374931 37.860 486 259 9 9 459 11 488 6.87e-97 300
Msa1064420 MtrunA17_Chr2g0294931 38.000 500 261 10 1 461 1 490 1.64e-96 299
Msa1064420 MtrunA17_Chr7g0265141 36.821 497 255 10 1 451 1 484 1.46e-95 296
Msa1064420 MtrunA17_Chr5g0410941 37.959 490 249 10 9 459 23 496 2.98e-95 296
Msa1064420 MtrunA17_Chr7g0265151 37.097 496 241 15 9 452 7 483 2.05e-94 294
Msa1064420 MtrunA17_Chr6g0463851 39.463 484 243 13 9 453 11 483 3.29e-93 291
Msa1064420 MtrunA17_Chr2g0294921 38.571 490 250 10 9 459 160 637 5.90e-93 294
Msa1064420 MtrunA17_Chr7g0243921 66.667 204 41 1 3 179 32 235 1.60e-89 272
Msa1064420 MtrunA17_Chr7g0231631 51.264 277 110 5 184 456 8 263 4.36e-86 265
Msa1064420 MtrunA17_Chr4g0066141 35.225 423 204 10 39 461 8 360 4.39e-66 216
Msa1064420 MtrunA17_Chr2g0294941 36.066 366 191 10 111 437 3 364 4.78e-62 206
Msa1064420 MtrunA17_Chr6g0454341 29.724 508 261 16 6 452 5 477 1.25e-58 200
Msa1064420 MtrunA17_Chr8g0361411 30.754 491 258 13 9 456 6 457 1.79e-57 196
Msa1064420 MtrunA17_Chr3g0078841 29.724 508 261 15 6 452 5 477 1.84e-57 197
Msa1064420 MtrunA17_Chr6g0454331 29.159 511 264 17 6 452 2 478 6.30e-56 193
Msa1064420 MtrunA17_Chr7g0217881 30.453 486 268 17 7 452 6 461 3.47e-55 191
Msa1064420 MtrunA17_Chr6g0454361 29.320 515 250 17 9 452 9 480 5.14e-55 191
Msa1064420 MtrunA17_Chr6g0454261 29.183 514 267 18 9 460 8 486 5.82e-55 190
Msa1064420 MtrunA17_Chr5g0440421 27.435 503 304 11 3 455 2 493 2.24e-54 189
Msa1064420 MtrunA17_Chr7g0275511 31.084 489 252 17 12 448 16 471 2.88e-54 188
Msa1064420 MtrunA17_Chr7g0232391 29.960 494 260 18 10 451 5 464 3.93e-54 188
Msa1064420 MtrunA17_Chr6g0454321 28.740 508 256 16 6 447 5 472 4.46e-54 191
Msa1064420 MtrunA17_Chr7g0243721 65.441 136 46 1 159 294 6 140 7.59e-54 177
Msa1064420 MtrunA17_Chr2g0307961 31.365 491 265 17 5 452 7 468 7.80e-54 187
Msa1064420 MtrunA17_Chr6g0454291 29.126 515 257 16 6 452 2 476 3.33e-53 186
Msa1064420 MtrunA17_Chr1g0159551 31.393 481 257 18 1 441 1 448 4.01e-53 185
Msa1064420 MtrunA17_Chr3g0098111 27.902 491 289 14 6 454 4 471 8.91e-53 184
Msa1064420 MtrunA17_Chr1g0173121 30.462 476 258 17 6 441 9 451 2.76e-52 182
Msa1064420 MtrunA17_Chr8g0370941 28.656 506 258 15 11 445 8 481 3.26e-52 184
Msa1064420 MtrunA17_Chr6g0454191 28.906 512 269 16 3 452 2 480 3.56e-52 183
Msa1064420 MtrunA17_Chr6g0464881 28.138 494 283 15 1 457 1 459 3.58e-52 182
Msa1064420 MtrunA17_Chr7g0232411 29.719 498 264 18 10 455 5 468 5.25e-52 182
Msa1064420 MtrunA17_Chr6g0454201 28.402 507 265 16 9 452 9 480 6.28e-52 182
Msa1064420 MtrunA17_Chr8g0359821 28.373 504 279 13 3 452 2 477 9.70e-52 182
Msa1064420 MtrunA17_Chr6g0464871 28.807 486 280 12 1 452 13 466 4.33e-51 179
Msa1064420 MtrunA17_Chr6g0453951 27.713 516 273 15 1 452 47 526 4.43e-51 181
Msa1064420 MtrunA17_Chr8g0357361 49.275 207 97 6 179 385 57 255 5.32e-51 174
Msa1064420 MtrunA17_Chr1g0207971 26.869 495 289 17 1 458 1 459 6.44e-51 179
Msa1064420 MtrunA17_Chr8g0336331 27.668 506 273 15 6 452 5 476 1.03e-50 179
Msa1064420 MtrunA17_Chr6g0454301 27.255 510 271 12 6 452 258 730 1.11e-50 183
Msa1064420 MtrunA17_Chr6g0454301 34.711 242 138 6 211 451 6 228 2.74e-35 139
Msa1064420 MtrunA17_Chr6g0453961 28.125 512 261 17 9 452 17 489 1.17e-50 179
Msa1064420 MtrunA17_Chr7g0250001 27.789 493 260 17 8 452 3 447 3.51e-50 177
Msa1064420 MtrunA17_Chr6g0462551 31.579 494 247 16 12 450 5 462 5.37e-50 177
Msa1064420 MtrunA17_Chr3g0118671 29.142 501 271 16 7 452 2 473 1.33e-49 176
Msa1064420 MtrunA17_Chr5g0423981 28.481 474 272 15 9 452 8 444 1.51e-49 175
Msa1064420 MtrunA17_Chr6g0454401 28.295 516 267 17 3 452 2 480 2.56e-49 175
Msa1064420 MtrunA17_Chr6g0454181 27.379 515 272 16 3 452 2 479 3.28e-49 175
Msa1064420 MtrunA17_Chr5g0426431 30.242 496 272 15 6 452 7 477 3.36e-49 175
Msa1064420 MtrunA17_Chr3g0112771 29.365 504 267 16 1 460 1 459 3.43e-49 174
Msa1064420 MtrunA17_Chr6g0464861 29.472 492 268 15 1 452 1 453 3.66e-49 174
Msa1064420 MtrunA17_Chr6g0464921 27.254 488 286 12 1 452 1 455 3.73e-49 174
Msa1064420 MtrunA17_Chr2g0329111 27.926 487 274 15 1 438 1 459 3.74e-49 175
Msa1064420 MtrunA17_Chr2g0278711 26.923 494 293 12 9 456 9 480 6.48e-49 174
Msa1064420 MtrunA17_Chr6g0452771 28.711 512 269 17 3 452 2 479 6.93e-49 174
Msa1064420 MtrunA17_Chr3g0092641 29.920 498 271 16 6 452 7 477 9.04e-49 174
Msa1064420 MtrunA17_Chr5g0420801 29.980 497 264 16 6 455 2 461 9.96e-49 173
Msa1064420 MtrunA17_Chr8g0347281 29.607 483 261 14 12 448 19 468 1.26e-48 173
Msa1064420 MtrunA17_Chr6g0464841 28.689 488 278 13 1 452 1 454 1.33e-48 172
Msa1064420 MtrunA17_Chr8g0377921 29.339 484 270 13 12 450 5 461 1.72e-48 172
Msa1064420 MtrunA17_Chr1g0207981 27.677 495 292 13 1 452 1 472 1.99e-48 173
Msa1064420 MtrunA17_Chr6g0454141 27.043 514 275 17 3 452 2 479 2.08e-48 173
Msa1064420 MtrunA17_Chr1g0161351 27.607 489 289 16 10 456 36 501 2.81e-48 173
Msa1064420 MtrunA17_Chr6g0454211 27.821 514 271 16 3 452 289 766 3.88e-48 176
Msa1064420 MtrunA17_Chr6g0454211 31.250 176 83 5 182 356 98 236 2.72e-19 91.3
Msa1064420 MtrunA17_Chr3g0118691 27.655 499 289 13 3 452 7 482 6.71e-48 171
Msa1064420 MtrunA17_Chr4g0050341 30.118 508 268 17 7 453 10 491 8.55e-48 171
Msa1064420 MtrunA17_Chr5g0414331 29.448 489 264 19 4 452 6 453 1.03e-47 171
Msa1064420 MtrunA17_Chr1g0207931 28.085 470 268 15 1 453 82 498 1.20e-47 171
Msa1064420 MtrunA17_Chr7g0249981 25.895 475 292 10 8 452 22 466 1.35e-47 171
Msa1064420 MtrunA17_Chr8g0380531 28.632 475 283 11 10 453 9 458 2.15e-47 169
Msa1064420 MtrunA17_Chr8g0382021 27.443 481 268 15 16 449 39 485 2.21e-47 170
Msa1064420 MtrunA17_Chr3g0118711 28.287 502 280 15 4 452 6 480 3.58e-47 169
Msa1064420 MtrunA17_Chr7g0249931 26.380 489 278 14 6 452 35 483 4.57e-47 169
Msa1064420 MtrunA17_Chr7g0218831 28.541 466 271 17 11 449 6 436 4.87e-47 168
Msa1064420 MtrunA17_Chr6g0454351 28.431 510 252 21 5 452 6 464 6.24e-47 168
Msa1064420 MtrunA17_Chr5g0403641 29.175 497 280 17 7 465 55 517 7.53e-47 169
Msa1064420 MtrunA17_Chr3g0118701 27.655 499 289 13 3 452 7 482 1.70e-46 167
Msa1064420 MtrunA17_Chr3g0118771 28.210 514 278 14 3 452 2 488 1.91e-46 167
Msa1064420 MtrunA17_Chr5g0414321 28.889 495 275 17 1 457 1 456 2.26e-46 167
Msa1064420 MtrunA17_Chr6g0454151 28.543 501 270 19 9 452 8 477 3.60e-46 167
Msa1064420 MtrunA17_Chr8g0347271 29.098 488 257 17 12 448 20 469 6.54e-46 166
Msa1064420 MtrunA17_Chr3g0079731 28.800 500 265 18 12 449 7 477 8.34e-46 166
Msa1064420 MtrunA17_Chr5g0448521 26.263 495 280 13 9 450 3 465 9.95e-46 165
Msa1064420 MtrunA17_Chr8g0361371 36.655 281 137 6 185 449 212 467 1.05e-45 165
Msa1064420 MtrunA17_Chr6g0459311 34.472 322 171 9 138 448 175 467 2.52e-45 164
Msa1064420 MtrunA17_Chr7g0218821 27.426 474 280 15 11 450 5 448 4.69e-45 163
Msa1064420 MtrunA17_Chr8g0369341 28.200 500 279 15 6 455 2 471 6.35e-45 163
Msa1064420 MtrunA17_Chr6g0454271 33.557 298 174 8 159 452 9 286 6.39e-45 158
Msa1064420 MtrunA17_Chr1g0207861 26.327 490 298 14 6 454 3 470 1.30e-44 162
Msa1064420 MtrunA17_Chr7g0232341 36.237 287 147 9 185 457 207 471 2.93e-44 161
Msa1064420 MtrunA17_Chr7g0218841 27.122 483 257 18 11 449 6 437 3.00e-44 160
Msa1064420 MtrunA17_Chr6g0454121 27.505 509 278 17 3 452 2 478 4.82e-44 161
Msa1064420 MtrunA17_Chr7g0243731 86.250 80 11 0 309 388 1 80 6.22e-44 149
Msa1064420 MtrunA17_Chr6g0454131 27.381 504 285 16 3 452 2 478 6.56e-44 160
Msa1064420 MtrunA17_Chr8g0336691 27.647 510 280 17 1 456 3 477 6.57e-44 165
Msa1064420 MtrunA17_Chr8g0336691 37.993 279 135 8 185 448 1120 1375 8.51e-42 159
Msa1064420 MtrunA17_Chr8g0336691 30.309 485 253 18 10 456 479 916 2.41e-38 149
Msa1064420 MtrunA17_Chr8g0365811 26.667 495 302 15 1 454 485 959 6.61e-44 165
Msa1064420 MtrunA17_Chr8g0365811 26.742 445 266 16 6 407 4 431 6.66e-38 147
Msa1064420 MtrunA17_Chr4g0053501 29.175 497 274 19 1 452 1 464 1.05e-43 160
Msa1064420 MtrunA17_Chr6g0462531 28.889 495 258 17 12 448 5 463 1.07e-43 159
Msa1064420 MtrunA17_Chr6g0486251 28.367 490 270 16 8 448 3 460 2.43e-43 159
Msa1064420 MtrunA17_Chr6g0486201 28.367 490 270 16 8 448 3 460 2.43e-43 159
Msa1064420 MtrunA17_Chr8g0335161 29.376 497 260 18 7 448 2 462 2.45e-43 159
Msa1064420 MtrunA17_Chr8g0334831 36.552 290 134 8 185 449 211 475 2.68e-43 159
Msa1064420 MtrunA17_Chr6g0449931 38.255 298 139 9 178 455 198 470 3.36e-43 158
Msa1064420 MtrunA17_Chr7g0232331 36.491 285 145 10 185 455 207 469 6.13e-43 157
Msa1064420 MtrunA17_Chr3g0121991 27.309 498 285 14 11 457 79 550 6.38e-43 159
Msa1064420 MtrunA17_Chr6g0462521 33.048 351 171 11 135 448 126 449 6.54e-43 157
Msa1064420 MtrunA17_Chr8g0335141 36.525 282 145 6 185 455 213 471 9.70e-43 157
Msa1064420 MtrunA17_Chr3g0112761 26.994 489 269 14 11 455 8 452 1.35e-42 156
Msa1064420 MtrunA17_Chr8g0336651 36.789 299 137 8 173 448 970 1239 1.86e-42 161
Msa1064420 MtrunA17_Chr8g0336651 36.861 274 129 6 185 456 547 778 1.33e-39 152
Msa1064420 MtrunA17_Chr8g0336651 36.918 279 136 9 185 448 207 460 1.75e-38 149
Msa1064420 MtrunA17_Chr1g0207951 26.531 490 289 18 1 453 116 571 1.87e-42 161
Msa1064420 MtrunA17_Chr1g0207951 25.767 489 298 17 1 452 648 1108 3.92e-42 160
Msa1064420 MtrunA17_Chr7g0218791 25.957 470 291 10 11 451 5 446 2.54e-42 155
Msa1064420 MtrunA17_Chr1g0207831 25.153 489 294 19 8 453 5 464 4.24e-42 155
Msa1064420 MtrunA17_Chr5g0431361 27.033 492 279 14 3 454 4 455 5.48e-42 155
Msa1064420 MtrunA17_Chr1g0153461 38.938 226 114 4 242 455 2 215 1.03e-41 147
Msa1064420 MtrunA17_Chr8g0339601 36.331 278 130 8 183 439 66 317 1.12e-41 151
Msa1064420 MtrunA17_Chr5g0431441 26.151 478 273 13 11 445 18 458 1.46e-41 154
Msa1064420 MtrunA17_Chr5g0412101 28.310 491 275 15 11 454 12 472 1.55e-41 154
Msa1064420 MtrunA17_Chr8g0339451 34.783 299 148 8 171 448 187 459 1.67e-41 154
Msa1064420 MtrunA17_Chr3g0122001 27.789 493 279 17 11 452 486 952 1.85e-41 158
Msa1064420 MtrunA17_Chr3g0122001 25.933 509 281 16 11 458 6 479 4.82e-39 150
Msa1064420 MtrunA17_Chr7g0218811 27.178 482 260 16 11 450 15 447 2.01e-41 153
Msa1064420 MtrunA17_Chr7g0232401 36.879 282 144 8 185 454 210 469 4.35e-41 152
Msa1064420 MtrunA17_Chr5g0442561 26.166 493 288 14 9 450 3 470 4.82e-41 152
Msa1064420 MtrunA17_Chr8g0339631 34.828 290 147 9 183 455 207 471 5.05e-41 152
Msa1064420 MtrunA17_Chr6g0462571 34.122 296 156 7 167 450 191 459 6.38e-41 152
Msa1064420 MtrunA17_Chr7g0232311 35.986 289 143 9 178 449 197 460 6.85e-41 152
Msa1064420 MtrunA17_Chr5g0442521 27.992 493 282 14 9 450 3 473 8.21e-41 152
Msa1064420 MtrunA17_Chr5g0442601 28.514 498 274 17 9 450 402 873 8.21e-41 155
Msa1064420 MtrunA17_Chr5g0442601 30.714 280 163 7 121 379 64 333 9.31e-25 107
Msa1064420 MtrunA17_Chr1g0153451 27.347 490 270 16 10 448 5 459 9.14e-41 152
Msa1064420 MtrunA17_Chr3g0118661 27.400 500 278 14 7 451 9 478 1.05e-40 152
Msa1064420 MtrunA17_Chr6g0462541 40.909 220 107 5 238 450 258 461 1.42e-40 151
Msa1064420 MtrunA17_Chr8g0336741 28.514 498 261 18 7 448 9 467 1.93e-40 151
Msa1064420 MtrunA17_Chr8g0339461 35.333 300 146 11 163 441 188 460 2.35e-40 150
Msa1064420 MtrunA17_Chr5g0442541 27.879 495 270 18 9 450 3 463 2.81e-40 150
Msa1064420 MtrunA17_Chr5g0431421 26.819 481 283 14 7 454 6 450 2.86e-40 150
Msa1064420 MtrunA17_Chr5g0412111 27.386 482 289 15 11 454 5 463 2.90e-40 150
Msa1064420 MtrunA17_Chr5g0412131 29.388 490 270 18 11 454 12 471 4.88e-40 150
Msa1064420 MtrunA17_Chr8g0373301 40.271 221 110 6 244 454 260 468 5.47e-40 149
Msa1064420 MtrunA17_Chr4g0053321 27.237 514 292 16 1 466 18 497 5.68e-40 150
Msa1064420 MtrunA17_Chr8g0336731 36.786 280 137 9 185 449 233 487 7.27e-40 150
Msa1064420 MtrunA17_Chr3g0118721 35.036 274 156 8 182 452 35 289 9.62e-40 145
Msa1064420 MtrunA17_Chr8g0334851 34.354 294 143 8 185 457 210 474 1.24e-39 149
Msa1064420 MtrunA17_Chr6g0454251 27.885 416 214 14 6 357 2 395 1.54e-39 147
Msa1064420 MtrunA17_Chr6g0454221 35.772 246 131 6 211 451 6 229 2.53e-39 144
Msa1064420 MtrunA17_Chr5g0431401 26.501 483 282 15 7 454 6 450 2.79e-39 147
Msa1064420 MtrunA17_Chr5g0431371 27.254 477 278 15 11 454 10 450 5.06e-39 146
Msa1064420 MtrunA17_Chr5g0442581 26.465 495 288 15 9 450 3 474 9.67e-39 147
Msa1064420 MtrunA17_Chr8g0339441 39.269 219 106 4 244 447 218 424 1.63e-38 145
Msa1064420 MtrunA17_Chr5g0442511 29.775 356 207 9 123 453 157 494 3.56e-38 145
Msa1064420 MtrunA17_Chr5g0442491 33.677 291 164 7 173 450 198 472 9.57e-38 144
Msa1064420 MtrunA17_Chr5g0393591 24.197 467 283 12 11 453 17 436 5.64e-37 141
Msa1064420 MtrunA17_Chr2g0278721 27.021 470 263 15 4 428 8 442 5.66e-37 144
Msa1064420 MtrunA17_Chr2g0278721 24.689 482 266 18 5 428 511 953 2.09e-21 97.8
Msa1064420 MtrunA17_Chr7g0241801 26.360 478 257 16 9 464 7 411 6.40e-37 140
Msa1064420 MtrunA17_Chr8g0334861 34.615 286 137 9 185 449 204 460 1.08e-36 140
Msa1064420 MtrunA17_Chr7g0231651 46.980 149 78 1 8 155 11 159 1.20e-36 134
Msa1064420 MtrunA17_Chr3g0106231 26.004 473 266 15 11 445 18 444 1.26e-36 140
Msa1064420 MtrunA17_Chr7g0241781 26.437 435 269 14 9 428 7 405 1.45e-36 139
Msa1064420 MtrunA17_Chr2g0278741 26.609 466 276 13 1 428 87 524 2.96e-36 140
Msa1064420 MtrunA17_Chr2g0302961 25.458 491 293 15 8 452 2 465 4.78e-36 139
Msa1064420 MtrunA17_Chr5g0426401 36.187 257 140 8 178 431 53 288 9.66e-36 134
Msa1064420 MtrunA17_Chr3g0079711 40.722 194 90 5 270 449 3 185 1.47e-35 130
Msa1064420 MtrunA17_Chr4g0032331 25.813 492 270 16 12 454 9 454 1.98e-35 137
Msa1064420 MtrunA17_Chr8g0377941 30.931 333 184 9 124 452 171 461 2.08e-35 137
Msa1064420 MtrunA17_Chr5g0401721 27.016 496 292 19 1 452 1 470 2.62e-35 137
Msa1064420 MtrunA17_Chr5g0432731 28.125 320 196 7 142 455 8 299 5.45e-35 132
Msa1064420 MtrunA17_Chr3g0106251 33.840 263 141 8 187 445 53 286 5.99e-35 132
Msa1064420 MtrunA17_Chr3g0118751 25.703 498 263 12 7 452 2 444 8.97e-35 135
Msa1064420 MtrunA17_Chr7g0249961 32.083 240 145 4 213 452 38 259 9.46e-35 130
Msa1064420 MtrunA17_Chr8g0336251 25.597 461 280 12 6 426 2 439 1.23e-34 135
Msa1064420 MtrunA17_Chr8g0336321 25.597 461 280 12 6 426 2 439 1.63e-34 134
Msa1064420 MtrunA17_Chr4g0069611 25.896 502 290 19 1 460 1 462 1.59e-33 131
Msa1064420 MtrunA17_Chr2g0302991 25.826 484 297 13 8 452 2 462 1.96e-33 131
Msa1064420 MtrunA17_Chr4g0072761 26.477 491 264 17 7 449 11 452 2.22e-33 131
Msa1064420 MtrunA17_Chr5g0409591 28.378 296 174 7 175 447 202 482 2.48e-33 131
Msa1064420 MtrunA17_Chr4g0072771 27.883 477 281 17 9 454 23 467 3.47e-33 130
Msa1064420 MtrunA17_Chr5g0429681 32.517 286 165 10 173 450 232 497 5.25e-33 130
Msa1064420 MtrunA17_Chr6g0454171 30.108 279 156 8 178 452 66 309 6.21e-33 127
Msa1064420 MtrunA17_Chr5g0429711 32.270 282 162 10 177 452 203 461 4.03e-32 127
Msa1064420 MtrunA17_Chr4g0042931 26.263 495 288 18 6 454 2 465 5.35e-32 127
Msa1064420 MtrunA17_Chr1g0196851 25.164 457 277 12 2 421 40 468 7.86e-32 127
Msa1064420 MtrunA17_Chr6g0466831 25.714 455 271 15 10 428 17 440 1.88e-31 125
Msa1064420 MtrunA17_Chr8g0355011 26.648 349 204 8 121 452 48 361 4.92e-31 123
Msa1064420 MtrunA17_Chr6g0464091 27.331 472 255 19 7 428 14 447 1.05e-30 124
Msa1064420 MtrunA17_Chr6g0454371 35.519 183 101 4 270 452 5 170 1.60e-30 116
Msa1064420 MtrunA17_Chr7g0232351 29.574 399 204 17 10 356 5 378 2.05e-30 121
Msa1064420 MtrunA17_Chr6g0466841 24.396 455 277 15 10 428 17 440 1.87e-29 120
Msa1064420 MtrunA17_Chr4g0029131 25.057 435 270 13 7 411 8 416 3.63e-29 120
Msa1064420 MtrunA17_Chr2g0302851 25.918 463 268 14 6 428 11 438 4.37e-29 119
Msa1064420 MtrunA17_Chr5g0448551 26.398 447 247 16 12 411 8 419 2.80e-28 116
Msa1064420 MtrunA17_Chr4g0042891 29.856 278 167 7 184 454 211 467 2.63e-27 114
Msa1064420 MtrunA17_Chr4g0039881 26.126 444 259 15 21 427 2 413 6.22e-27 112
Msa1064420 MtrunA17_Chr8g0337381 41.429 140 68 3 317 455 2 128 8.04e-26 102
Msa1064420 MtrunA17_Chr3g0092031 35.135 185 102 6 246 428 6 174 1.08e-25 103
Msa1064420 MtrunA17_Chr8g0367221 23.758 463 280 15 10 418 11 454 1.41e-24 107
Msa1064420 MtrunA17_Chr8g0367221 32.275 189 108 5 246 429 1058 1231 1.04e-20 95.9
Msa1064420 MtrunA17_Chr8g0367221 32.086 187 110 5 246 418 1548 1731 1.72e-18 89.0
Msa1064420 MtrunA17_Chr6g0454231 28.889 270 128 10 187 452 9 218 1.14e-23 103
Msa1064420 MtrunA17_Chr4g0040691 24.508 457 284 15 6 427 3 433 1.15e-23 103
Msa1064420 MtrunA17_Chr2g0283041 23.958 480 302 17 8 452 4 455 1.50e-23 102
Msa1064420 MtrunA17_Chr5g0427571 28.571 238 156 5 190 426 49 273 1.58e-23 100
Msa1064420 MtrunA17_Chr6g0482061 33.831 201 117 6 243 439 278 466 1.64e-23 103
Msa1064420 MtrunA17_Chr8g0336261 36.242 149 79 4 270 418 5 137 2.05e-23 95.5
Msa1064420 MtrunA17_Chr2g0319801 24.841 471 267 15 5 427 2 433 2.45e-21 96.3
Msa1064420 MtrunA17_Chr1g0207881 31.579 133 83 2 321 453 261 385 7.99e-21 94.4
Msa1064420 MtrunA17_Chr5g0431431 30.890 191 106 5 187 374 157 324 1.86e-20 92.8
Msa1064420 MtrunA17_Chr2g0319731 24.101 473 276 15 1 427 15 450 2.07e-20 93.6
Msa1064420 MtrunA17_Chr2g0319761 24.421 475 279 17 10 441 7 444 6.77e-20 92.0
Msa1064420 MtrunA17_Chr7g0250021 24.405 336 193 10 6 301 7 321 1.07e-18 87.0
Msa1064420 MtrunA17_Chr4g0040711 30.811 185 115 4 245 427 260 433 2.96e-17 84.0
Msa1064420 MtrunA17_Chr2g0319791 22.511 462 279 14 10 427 7 433 4.03e-17 83.6
Msa1064420 MtrunA17_Chr4g0029151 32.967 182 106 6 246 421 265 436 8.31e-17 82.8
Msa1064420 MtrunA17_Chr2g0319751 22.056 467 293 14 1 427 475 910 1.84e-16 82.4
Msa1064420 MtrunA17_Chr2g0319751 21.351 459 268 14 8 427 5 409 8.58e-16 80.5
Msa1064420 MtrunA17_Chr6g0453981 34.940 166 89 7 159 315 72 227 1.69e-15 75.9
Msa1064420 MtrunA17_Chr4g0066231 41.558 77 45 0 355 431 1 77 2.20e-13 65.5
Msa1064420 MtrunA17_Chr2g0321331 31.313 198 102 7 232 427 77 242 6.37e-13 68.9
Msa1064420 MtrunA17_Chr6g0453941 31.081 148 97 3 165 311 133 276 7.17e-12 65.9
Msa1064420 MtrunA17_Chr6g0454391 33.721 86 44 1 328 413 8 80 4.69e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1064420 AT4G34131.1 41.331 496 231 12 3 454 2 481 2.71e-120 360
Msa1064420 AT2G15480.1 38.664 494 252 9 3 456 2 484 1.14e-117 353
Msa1064420 AT2G15480.2 37.972 503 253 9 3 456 2 494 1.19e-117 354
Msa1064420 AT2G15490.3 39.139 488 246 9 9 456 5 481 2.77e-116 350
Msa1064420 AT2G15490.1 39.024 492 244 10 9 456 5 484 4.99e-115 347
Msa1064420 AT4G34135.1 40.808 495 240 11 1 454 1 483 3.94e-114 345
Msa1064420 AT2G36770.1 38.800 500 260 10 1 459 1 495 1.11e-110 336
Msa1064420 AT2G36800.1 39.192 495 256 9 1 455 1 490 3.14e-110 335
Msa1064420 AT2G36780.1 38.788 495 260 9 3 459 6 495 1.92e-109 333
Msa1064420 AT2G36760.1 37.876 499 261 8 3 460 6 496 2.34e-108 330
Msa1064420 AT4G34138.1 37.751 498 258 10 1 459 1 485 5.85e-106 324
Msa1064420 AT2G36790.1 39.357 498 257 10 1 458 1 493 1.42e-105 323
Msa1064420 AT2G36750.1 38.398 487 258 8 10 459 9 490 2.41e-105 322
Msa1064420 AT3G53160.1 38.398 487 253 14 6 452 3 482 4.85e-98 303
Msa1064420 AT3G53150.1 35.785 503 251 13 9 452 20 509 3.52e-89 281
Msa1064420 AT4G34135.2 37.462 331 163 6 1 291 1 327 1.06e-66 217
Msa1064420 AT2G16890.2 32.079 505 266 16 6 463 4 478 2.25e-62 210
Msa1064420 AT1G22400.1 30.196 510 283 13 1 459 1 488 2.04e-60 205
Msa1064420 AT1G10400.1 33.198 491 248 19 9 452 5 462 2.81e-60 204
Msa1064420 AT1G22380.1 30.515 485 263 15 1 433 1 463 2.28e-59 202
Msa1064420 AT5G14860.1 31.717 495 258 16 11 452 8 475 5.68e-59 201
Msa1064420 AT2G16890.3 32.192 438 228 13 6 397 4 418 7.47e-57 194
Msa1064420 AT1G22360.1 28.659 492 281 12 9 452 8 477 1.65e-54 189
Msa1064420 AT5G03490.1 30.146 481 266 17 11 455 19 465 2.65e-53 186
Msa1064420 AT1G22340.1 29.000 500 270 16 9 452 11 481 5.36e-53 186
Msa1064420 AT1G22360.2 29.087 471 275 11 9 429 8 469 7.19e-53 185
Msa1064420 AT1G78270.1 28.119 505 273 13 6 452 8 480 6.81e-52 182
Msa1064420 AT1G22370.2 28.935 432 245 10 1 383 1 419 2.01e-51 181
Msa1064420 AT1G01420.2 29.317 498 263 17 1 445 1 462 1.88e-50 179
Msa1064420 AT1G01420.1 29.532 491 257 17 8 445 5 459 7.05e-50 177
Msa1064420 AT2G31750.1 27.917 480 279 16 9 452 6 454 7.56e-50 176
Msa1064420 AT1G73880.1 27.930 512 277 17 1 459 1 473 1.04e-49 176
Msa1064420 AT2G31750.2 27.500 480 281 15 9 452 6 454 1.67e-49 176
Msa1064420 AT1G06000.1 30.472 466 274 15 3 452 2 433 3.41e-49 174
Msa1064420 AT4G01070.1 29.400 500 265 17 11 457 8 472 5.88e-49 174
Msa1064420 AT4G15480.1 27.049 488 292 16 6 452 14 478 2.31e-48 173
Msa1064420 AT1G05675.1 27.101 476 278 10 11 449 6 449 6.39e-48 171
Msa1064420 AT3G50740.1 28.180 511 266 18 8 455 4 476 6.76e-48 172
Msa1064420 AT1G51210.1 29.231 455 248 17 9 428 18 433 1.04e-47 170
Msa1064420 AT3G02100.1 27.888 502 267 16 3 454 5 461 2.04e-47 170
Msa1064420 AT5G26310.1 28.937 508 256 19 8 453 4 468 2.78e-46 167
Msa1064420 AT5G05870.1 25.413 484 294 10 5 452 2 454 1.67e-45 165
Msa1064420 AT1G24100.1 28.803 493 275 15 1 452 1 458 2.62e-45 164
Msa1064420 AT2G31790.1 27.143 490 274 15 9 455 6 455 2.77e-45 164
Msa1064420 AT5G05860.1 27.328 494 266 15 4 452 2 447 4.22e-45 163
Msa1064420 AT5G12890.1 27.092 502 293 15 1 451 1 480 9.79e-45 163
Msa1064420 AT2G28080.1 27.292 480 281 13 15 454 22 473 2.01e-44 162
Msa1064420 AT2G36970.1 25.394 508 294 15 4 459 3 477 3.91e-44 162
Msa1064420 AT1G05680.1 27.273 484 267 16 11 449 6 449 9.47e-44 160
Msa1064420 AT3G46680.1 29.006 493 247 21 9 450 7 447 9.84e-44 160
Msa1064420 AT3G16520.3 35.036 274 147 8 182 449 208 456 1.04e-43 160
Msa1064420 AT2G43820.1 27.463 477 278 16 11 454 7 448 6.36e-43 157
Msa1064420 AT4G15260.1 32.414 290 169 6 175 452 80 354 2.31e-42 154
Msa1064420 AT4G36770.1 28.016 489 248 17 9 438 2 445 3.44e-42 155
Msa1064420 AT5G66690.1 27.075 506 268 17 8 453 4 468 3.82e-42 156
Msa1064420 AT3G11340.1 27.835 485 263 15 12 455 9 447 3.87e-42 155
Msa1064420 AT2G29730.1 25.820 488 296 13 10 456 4 466 4.44e-42 155
Msa1064420 AT3G46650.1 28.294 463 261 15 9 445 8 425 4.52e-42 155
Msa1064420 AT3G46660.1 28.484 488 261 19 12 455 15 458 9.96e-42 154
Msa1064420 AT4G15490.1 25.253 495 281 18 11 452 8 466 1.94e-41 154
Msa1064420 AT4G15500.1 25.455 495 283 18 11 456 9 466 2.70e-41 154
Msa1064420 AT3G21800.1 26.087 506 281 16 8 452 2 475 2.89e-41 154
Msa1064420 AT3G16520.1 37.500 224 122 6 182 399 208 419 3.33e-41 153
Msa1064420 AT3G16520.2 37.500 224 122 6 182 399 208 419 3.41e-41 153
Msa1064420 AT5G05900.1 26.210 496 260 17 7 450 4 445 5.54e-41 152
Msa1064420 AT2G43840.1 25.880 483 276 14 11 453 7 447 1.51e-40 151
Msa1064420 AT2G43840.2 25.673 483 277 14 11 453 7 447 3.04e-40 150
Msa1064420 AT3G46670.1 28.221 489 261 20 11 455 9 451 3.93e-40 150
Msa1064420 AT2G30150.2 26.380 489 270 15 11 455 13 455 5.39e-40 150
Msa1064420 AT5G05880.1 26.157 497 274 14 5 455 2 451 9.18e-40 149
Msa1064420 AT3G21760.1 26.614 511 276 18 9 452 2 480 1.06e-39 149
Msa1064420 AT2G18570.1 24.646 495 283 21 8 447 2 461 1.13e-39 149
Msa1064420 AT3G21560.1 25.301 498 279 21 11 452 12 472 2.08e-39 149
Msa1064420 AT1G22370.1 35.749 207 128 3 178 383 47 249 2.87e-39 144
Msa1064420 AT3G21790.1 26.931 505 280 18 9 452 2 478 3.18e-39 148
Msa1064420 AT2G29740.1 26.892 502 289 17 1 452 1 474 4.77e-39 147
Msa1064420 AT5G38010.1 26.181 508 259 19 4 452 3 453 7.26e-39 146
Msa1064420 AT3G55700.1 25.410 488 279 13 11 455 8 453 1.63e-38 145
Msa1064420 AT1G07260.1 26.389 504 269 18 12 452 7 471 1.69e-38 146
Msa1064420 AT2G30140.1 25.820 488 267 14 11 452 13 451 2.41e-38 145
Msa1064420 AT2G30140.2 25.873 487 267 14 11 452 13 450 2.52e-38 145
Msa1064420 AT5G59590.1 25.152 493 265 18 11 452 10 449 3.11e-38 145
Msa1064420 AT3G46700.1 27.216 485 269 16 9 454 7 446 3.13e-38 145
Msa1064420 AT2G30150.1 25.979 485 269 15 15 455 1 439 3.51e-38 144
Msa1064420 AT5G59580.1 26.230 488 275 19 9 455 7 450 4.34e-38 144
Msa1064420 AT4G15550.1 27.347 490 299 15 1 451 1 472 5.02e-38 144
Msa1064420 AT4G14090.1 27.273 484 277 15 6 451 8 454 7.30e-38 144
Msa1064420 AT1G07240.1 35.145 276 143 8 178 441 213 464 2.99e-37 142
Msa1064420 AT1G01390.1 28.337 487 261 18 8 441 5 456 5.82e-37 142
Msa1064420 AT2G23260.1 27.329 483 271 18 11 452 10 453 8.13e-37 141
Msa1064420 AT1G01390.2 28.337 487 261 18 8 441 22 473 8.19e-37 142
Msa1064420 AT5G05890.1 26.453 499 274 16 5 455 2 455 1.29e-36 140
Msa1064420 AT4G15280.1 32.734 278 161 7 185 452 212 473 2.51e-36 140
Msa1064420 AT3G21750.1 32.746 284 156 8 185 452 204 468 2.59e-36 140
Msa1064420 AT4G15280.2 32.734 278 161 7 185 452 244 505 5.03e-36 139
Msa1064420 AT2G18560.1 33.333 219 126 5 239 447 163 371 1.28e-35 136
Msa1064420 AT2G23250.1 27.386 482 250 18 19 452 6 435 1.46e-35 137
Msa1064420 AT3G46720.1 27.677 495 260 19 4 454 2 442 2.57e-35 137
Msa1064420 AT3G46690.1 26.078 487 277 15 9 454 7 451 3.69e-35 136
Msa1064420 AT2G29750.1 25.558 493 289 17 11 452 8 473 5.85e-35 136
Msa1064420 AT3G21780.1 24.187 492 300 12 9 452 2 468 2.03e-34 134
Msa1064420 AT5G49690.1 25.153 489 286 18 10 460 9 455 6.87e-34 133
Msa1064420 AT2G29710.1 34.234 222 133 6 232 452 253 462 1.96e-33 132
Msa1064420 AT1G05560.1 27.027 481 278 17 11 452 5 451 2.35e-33 131
Msa1064420 AT1G07250.1 34.589 292 160 11 170 452 203 472 2.64e-33 131
Msa1064420 AT1G05560.2 27.273 473 287 16 11 452 55 501 4.02e-33 131
Msa1064420 AT2G26480.1 27.066 484 257 17 12 449 9 442 6.43e-33 130
Msa1064420 AT5G65550.1 26.987 478 257 19 9 429 7 449 8.27e-33 130
Msa1064420 AT5G17050.1 26.349 482 278 16 11 452 12 456 1.30e-32 129
Msa1064420 AT1G30530.1 27.389 471 281 16 11 452 12 450 1.88e-32 129
Msa1064420 AT5G38040.1 25.833 480 258 18 21 452 20 449 3.69e-32 128
Msa1064420 AT5G17030.1 25.349 501 270 18 5 452 6 455 1.02e-31 127
Msa1064420 AT1G05530.1 24.845 483 289 13 11 452 5 454 4.43e-31 125
Msa1064420 AT5G17040.2 30.996 271 158 7 182 452 96 337 2.37e-30 120
Msa1064420 AT5G17040.1 30.996 271 158 7 182 452 198 439 3.48e-30 122
Msa1064420 AT3G55710.1 30.233 301 178 8 164 458 186 460 1.13e-29 121
Msa1064420 AT3G29630.2 27.332 461 284 17 8 459 3 421 3.69e-26 110
Msa1064420 AT2G15490.2 31.847 157 99 2 9 157 5 161 6.56e-26 107
Msa1064420 AT2G15490.2 28.302 212 119 10 266 456 71 270 7.84e-12 66.2
Msa1064420 AT3G29630.1 27.311 476 291 19 8 459 3 447 1.31e-25 109
Msa1064420 AT5G53990.1 26.267 434 273 16 10 423 5 411 4.42e-24 104
Msa1064420 AT2G16890.4 28.882 322 166 11 6 281 4 308 8.60e-24 102
Msa1064420 AT2G16890.1 28.882 322 166 11 6 281 4 308 8.60e-24 102
Msa1064420 AT3G22250.1 32.804 189 104 6 244 431 274 440 1.31e-22 100
Msa1064420 AT4G27570.1 24.222 450 255 13 9 416 5 410 1.78e-22 100
Msa1064420 AT4G27560.1 23.235 439 273 11 9 416 5 410 3.45e-21 96.3
Msa1064420 AT1G50580.1 25.114 438 286 16 7 426 2 415 8.14e-21 95.1
Msa1064420 AT5G37950.2 25.868 317 173 13 84 356 39 337 1.15e-20 93.6
Msa1064420 AT2G22930.1 24.353 464 299 18 11 453 6 438 2.59e-20 93.6
Msa1064420 AT1G64920.1 22.756 479 304 14 7 455 2 444 5.07e-20 92.8
Msa1064420 AT5G37950.1 25.387 323 173 13 84 356 39 343 7.49e-20 91.3
Msa1064420 AT1G64910.1 24.490 392 274 12 7 386 2 383 7.64e-20 92.0
Msa1064420 AT4G09500.1 24.178 426 278 15 9 427 4 391 2.88e-19 90.1
Msa1064420 AT5G54010.1 25.708 459 266 20 7 433 2 417 2.18e-18 87.8
Msa1064420 AT4G09500.2 24.263 441 284 17 9 427 4 416 3.35e-17 84.0
Msa1064420 AT2G22590.1 29.730 185 116 5 245 427 273 445 1.85e-16 82.0
Msa1064420 AT4G01070.2 24.922 321 177 11 11 290 8 305 4.40e-15 77.0
Msa1064420 AT5G54060.1 21.649 485 311 16 7 449 9 466 5.51e-15 77.4

Find 98 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTCATTTCTTTGCTCTCT+TGG 0.225932 7_2:-57042230 None:intergenic
AACAGACAGAATTGCTAAAT+TGG 0.249759 7_2:+57041704 Msa1064420:CDS
TCCTTTCCTCAAATTCTTGC+AGG 0.289948 7_2:-57041891 None:intergenic
GGCACCACAGCTTCTGATAT+TGG 0.312472 7_2:+57041951 Msa1064420:CDS
GGAGCAAAAGAAAACAAGTT+TGG 0.315209 7_2:+57042132 Msa1064420:CDS
TGCTTTCTCACCAAGTGCTT+TGG 0.319430 7_2:-57042361 None:intergenic
CGATGAAAGAAAGGCTAATA+GGG 0.325559 7_2:+57041657 Msa1064420:CDS
GCACATGGGCTTGAAAATTC+AGG 0.326438 7_2:+57041811 Msa1064420:CDS
GTCACAAACCCTCCGGTTGC+AGG 0.349694 7_2:-57041979 None:intergenic
ACGATGAAAGAAAGGCTAAT+AGG 0.351671 7_2:+57041656 Msa1064420:CDS
TTTCTTCCATATCCATTTGC+AGG 0.356448 7_2:+57040933 Msa1064420:CDS
AGTCTTGCAGTGTCAATCAT+AGG 0.358235 7_2:-57040966 None:intergenic
ATATGGCCTGCAAATGGATA+TGG 0.375956 7_2:-57040939 None:intergenic
ACAGAACTTCAATAGATTCC+TGG 0.378584 7_2:-57041211 None:intergenic
AACAAAGTAAATTGCACATT+CGG 0.392046 7_2:-57041348 None:intergenic
TGAAGAGGAAATGGTGAGAA+GGG 0.407565 7_2:+57042167 Msa1064420:CDS
ACCCGTCGCAGCTTTGTGAT+TGG 0.415035 7_2:+57041452 Msa1064420:intron
CTACACATGCCAATGCTTCA+AGG 0.416323 7_2:+57041024 Msa1064420:CDS
GAGCAAAAGAAAACAAGTTT+GGG 0.416383 7_2:+57042133 Msa1064420:CDS
ACCTTCCTCTATAGTCCTCT+TGG 0.417533 7_2:-57042280 None:intergenic
CCCGTCGCAGCTTTGTGATT+GGG 0.418191 7_2:+57041453 Msa1064420:intron
TTGTTAGCCCAAGCTGAAAC+TGG 0.419730 7_2:-57041631 None:intergenic
GCAACAAGGGCTATATCATA+TGG 0.420068 7_2:+57041923 Msa1064420:CDS
TAACATTAGTGAAGAGGAAA+TGG 0.423172 7_2:+57042158 Msa1064420:CDS
AGGTTTCCTGCAAGAATTTG+AGG 0.429457 7_2:+57041885 Msa1064420:CDS
AACATTGGCCACGTGATCAT+TGG 0.436251 7_2:-57042048 None:intergenic
ATATTGGACCACCCTGCAAC+CGG 0.452801 7_2:+57041967 Msa1064420:CDS
TGTCAATCATAGGGTTCATA+TGG 0.456227 7_2:-57040956 None:intergenic
ATAGACACTGACATCAGTTC+AGG 0.460139 7_2:+57041059 Msa1064420:CDS
AAACTTTATAAAACTACAAT+CGG 0.463073 7_2:+57041586 Msa1064420:CDS
CGCAGCTTTGTGATTGGGAA+AGG 0.468699 7_2:+57041458 Msa1064420:intron
GTAAAATCACTCTTGGAGTA+AGG 0.473539 7_2:+57041183 Msa1064420:CDS
GATAAAGATGAGGATGGAAA+AGG 0.474379 7_2:+57041865 Msa1064420:CDS
TCTGTATTGTATGTAAGTTT+TGG 0.476811 7_2:+57041748 Msa1064420:CDS
GTTCTTGAAAGTGTAAATGC+TGG 0.477059 7_2:+57042021 Msa1064420:CDS
TGTCGGACCAGTTTCAGCTT+GGG 0.478674 7_2:+57041624 Msa1064420:CDS
GGGTTCATATGGCCTGCAAA+TGG 0.492645 7_2:-57040945 None:intergenic
GCCACTTCACTTGAAATGCT+TGG 0.493476 7_2:+57041161 Msa1064420:CDS
CTTTCCGCAGATTCATACAT+TGG 0.493958 7_2:-57041511 None:intergenic
TGACAGATATGAAGTATCCT+TGG 0.496894 7_2:+57041261 Msa1064420:CDS
ATGCTTGGTAAAATCACTCT+TGG 0.497010 7_2:+57041176 Msa1064420:CDS
GAATCTGCGGAAAGAAGCTA+TGG 0.498869 7_2:+57041520 Msa1064420:CDS
ATATCTGTCACTATACAATC+TGG 0.499054 7_2:-57041248 None:intergenic
ACCAAGCATTTCAAGTGAAG+TGG 0.500967 7_2:-57041162 None:intergenic
GTGTCGGACCAGTTTCAGCT+TGG 0.502476 7_2:+57041623 Msa1064420:CDS
GGACACATGGAGAAAAGCTT+AGG 0.509633 7_2:+57041679 Msa1064420:CDS
CAGTTCCCTTCAGCTCAAGT+TGG 0.509931 7_2:+57041107 Msa1064420:CDS
CTACAATCGGAATCAAATCA+TGG 0.511363 7_2:+57041599 Msa1064420:CDS
AGGGCTATATCATATGGGAC+TGG 0.513758 7_2:+57041929 Msa1064420:CDS
AAAGATGATAAAGATGAGGA+TGG 0.515143 7_2:+57041859 Msa1064420:CDS
GAGCTGCAAAAGTAAATCCT+TGG 0.517490 7_2:-57041314 None:intergenic
GGTTTGTGACTCATTGTGGT+TGG 0.521028 7_2:+57041992 Msa1064420:CDS
AGGATGAGAGCAAAGAAACT+TGG 0.527542 7_2:+57042249 Msa1064420:CDS
GTGAAGAGGAAATGGTGAGA+AGG 0.530860 7_2:+57042166 Msa1064420:CDS
GGGAGACCAACTTGAGCTGA+AGG 0.537436 7_2:-57041113 None:intergenic
GCAGCTTTGTGATTGGGAAA+GGG 0.538716 7_2:+57041459 Msa1064420:intron
TAAAATTGCTCAGCAAACAT+TGG 0.543942 7_2:-57042063 None:intergenic
GCAGCTGATTCGACAGTCCA+AGG 0.545714 7_2:-57041278 None:intergenic
AGTTTCAGCTTGGGCTAACA+AGG 0.547919 7_2:+57041633 Msa1064420:CDS
CTGCAAAACTAAACATTCCA+AGG 0.548184 7_2:+57041297 Msa1064420:CDS
TCCTGCAAGAATTTGAGGAA+AGG 0.548333 7_2:+57041890 Msa1064420:CDS
CAACAAGGGCTATATCATAT+GGG 0.549003 7_2:+57041924 Msa1064420:CDS
GTCTTGCAGTGTCAATCATA+GGG 0.549435 7_2:-57040965 None:intergenic
TGAACCAATGTATGAATCTG+CGG 0.550608 7_2:+57041507 Msa1064420:CDS
TAACAAGGACGATGAAAGAA+AGG 0.552105 7_2:+57041648 Msa1064420:CDS
AAGGGAAAACAATCCGATGA+AGG 0.553609 7_2:+57041477 Msa1064420:CDS
CAGCTTGTAGAAATTGCACA+TGG 0.554057 7_2:+57041796 Msa1064420:CDS
TCACAAACCCTCCGGTTGCA+GGG 0.557487 7_2:-57041978 None:intergenic
TTGAAGATTGGTGTCCCAGT+AGG 0.558625 7_2:+57042111 Msa1064420:CDS
ACCAAGAGAGCAAAGAAATG+AGG 0.564369 7_2:+57042229 Msa1064420:CDS
TGGGACTAACATTAGTGAAG+AGG 0.570468 7_2:+57042152 Msa1064420:CDS
TTGAAGAAATCCAAAGCACT+TGG 0.578175 7_2:+57042351 Msa1064420:CDS
ATTGGCATGTGTAGTTATGA+TGG 0.590368 7_2:-57041015 None:intergenic
GCTCAAGTTGGTCTCCCTGA+CGG 0.597767 7_2:+57041119 Msa1064420:CDS
TCTTGGAGTAAGGATGCTCC+AGG 0.600687 7_2:+57041193 Msa1064420:CDS
GCAAGACTATTTGCAAAGCA+TGG 0.605568 7_2:+57040981 Msa1064420:CDS
AAAGGCTAATAGGGGACACA+TGG 0.612050 7_2:+57041666 Msa1064420:CDS
TGCTGCCAAGAGGACTATAG+AGG 0.613396 7_2:+57042275 Msa1064420:CDS
ATTTCTACAAGCTGAGCATG+AGG 0.614575 7_2:-57041787 None:intergenic
GGAGGGTTTGTGACTCATTG+TGG 0.616914 7_2:+57041988 Msa1064420:CDS
AAGAGGACTATAGAGGAAGG+TGG 0.618073 7_2:+57042282 Msa1064420:CDS
ACAATGAGTCACAAACCCTC+CGG 0.620558 7_2:-57041986 None:intergenic
GGAGACCAACTTGAGCTGAA+GGG 0.621494 7_2:-57041112 None:intergenic
GGAATCAAATCATGGAGTGT+CGG 0.622138 7_2:+57041607 Msa1064420:CDS
TTGGACCACCCTGCAACCGG+AGG 0.626843 7_2:+57041970 Msa1064420:CDS
TGGTCCAATATCAGAAGCTG+TGG 0.627761 7_2:-57041955 None:intergenic
GCCAAGAGGACTATAGAGGA+AGG 0.631460 7_2:+57042279 Msa1064420:CDS
TGGACCACCCTGCAACCGGA+GGG 0.632525 7_2:+57041971 Msa1064420:CDS
GGGCTATATCATATGGGACT+GGG 0.632573 7_2:+57041930 Msa1064420:CDS
AGGATTAAAGAAAGCAACAA+GGG 0.643185 7_2:+57041910 Msa1064420:CDS
GAGAAGGGAAGAGATAGCTG+AGG 0.644697 7_2:+57042182 Msa1064420:CDS
AACTTGGTGATGCTGCCAAG+AGG 0.668809 7_2:+57042265 Msa1064420:CDS
AGCTTGTAGAAATTGCACAT+GGG 0.669891 7_2:+57041797 Msa1064420:CDS
GATGAAAGAAAGGCTAATAG+GGG 0.677259 7_2:+57041658 Msa1064420:CDS
CTGGTTTGCCAATGATCACG+TGG 0.682161 7_2:+57042040 Msa1064420:CDS
AAGGATTAAAGAAAGCAACA+AGG 0.694588 7_2:+57041909 Msa1064420:CDS
AATCTGCGGAAAGAAGCTAT+GGG 0.706102 7_2:+57041521 Msa1064420:CDS
CAAACCCTCCGGTTGCAGGG+TGG 0.715047 7_2:-57041975 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACTTTATAAAACTACAAT+CGG + chr7_2:57041586-57041605 Msa1064420:CDS 15.0%
!! AAACTTTATAAAACTACAAT+CGG + chr7_2:57041586-57041605 Msa1064420:CDS 15.0%
!!! AACTACATGAATTTTGTTAT+TGG - chr7_2:57040913-57040932 None:intergenic 20.0%
!! ATCAGAAACTAAATCATAAT+GGG - chr7_2:57041387-57041406 None:intergenic 20.0%
!! TATCAGAAACTAAATCATAA+TGG - chr7_2:57041388-57041407 None:intergenic 20.0%
!!! ATTCAGGTCATAATTTTATA+TGG + chr7_2:57041827-57041846 Msa1064420:CDS 20.0%
!!! TTCAGGTCATAATTTTATAT+GGG + chr7_2:57041828-57041847 Msa1064420:CDS 20.0%
!! AAAAAAAGATGATAAAGATG+AGG + chr7_2:57041855-57041874 Msa1064420:CDS 20.0%
!!! AACTACATGAATTTTGTTAT+TGG - chr7_2:57040913-57040932 None:intergenic 20.0%
!! ATCAGAAACTAAATCATAAT+GGG - chr7_2:57041387-57041406 None:intergenic 20.0%
!! TATCAGAAACTAAATCATAA+TGG - chr7_2:57041388-57041407 None:intergenic 20.0%
!!! ATTCAGGTCATAATTTTATA+TGG + chr7_2:57041827-57041846 Msa1064420:CDS 20.0%
!!! TTCAGGTCATAATTTTATAT+GGG + chr7_2:57041828-57041847 Msa1064420:CDS 20.0%
!! AAAAAAAGATGATAAAGATG+AGG + chr7_2:57041855-57041874 Msa1064420:CDS 20.0%
! AACAAAGTAAATTGCACATT+CGG - chr7_2:57041351-57041370 None:intergenic 25.0%
! TCAGAAACTAAATCATAATG+GGG - chr7_2:57041386-57041405 None:intergenic 25.0%
!!! TTCATACATTGGTTCAAAAA+TGG - chr7_2:57041503-57041522 None:intergenic 25.0%
!! TCTGTATTGTATGTAAGTTT+TGG + chr7_2:57041748-57041767 Msa1064420:CDS 25.0%
! AACAAAGTAAATTGCACATT+CGG - chr7_2:57041351-57041370 None:intergenic 25.0%
! TCAGAAACTAAATCATAATG+GGG - chr7_2:57041386-57041405 None:intergenic 25.0%
!!! TTCATACATTGGTTCAAAAA+TGG - chr7_2:57041503-57041522 None:intergenic 25.0%
!! TCTGTATTGTATGTAAGTTT+TGG + chr7_2:57041748-57041767 Msa1064420:CDS 25.0%
!!! TGTCAGTGTCTATTGATTTT+TGG - chr7_2:57041052-57041071 None:intergenic 30.0%
!! CTGAATAAGTTGAGTTTTGA+TGG - chr7_2:57041090-57041109 None:intergenic 30.0%
ATATCTGTCACTATACAATC+TGG - chr7_2:57041251-57041270 None:intergenic 30.0%
! TGATTTAGTTTCTGATACAC+AGG + chr7_2:57041391-57041410 Msa1064420:intron 30.0%
AACAGACAGAATTGCTAAAT+TGG + chr7_2:57041704-57041723 Msa1064420:CDS 30.0%
!! TAAGTTTTGGTAGCTTTACT+AGG + chr7_2:57041761-57041780 Msa1064420:CDS 30.0%
AAAGATGATAAAGATGAGGA+TGG + chr7_2:57041859-57041878 Msa1064420:CDS 30.0%
AAGGATTAAAGAAAGCAACA+AGG + chr7_2:57041909-57041928 Msa1064420:CDS 30.0%
AGGATTAAAGAAAGCAACAA+GGG + chr7_2:57041910-57041929 Msa1064420:CDS 30.0%
TAAAATTGCTCAGCAAACAT+TGG - chr7_2:57042066-57042085 None:intergenic 30.0%
! AGCAATTTTACAATGAGAAG+TGG + chr7_2:57042076-57042095 Msa1064420:CDS 30.0%
!!! CTTGTTGATGTTTTGAAGAT+TGG + chr7_2:57042099-57042118 Msa1064420:CDS 30.0%
GAGCAAAAGAAAACAAGTTT+GGG + chr7_2:57042133-57042152 Msa1064420:CDS 30.0%
TAACATTAGTGAAGAGGAAA+TGG + chr7_2:57042158-57042177 Msa1064420:CDS 30.0%
!!! TGTCAGTGTCTATTGATTTT+TGG - chr7_2:57041052-57041071 None:intergenic 30.0%
!! CTGAATAAGTTGAGTTTTGA+TGG - chr7_2:57041090-57041109 None:intergenic 30.0%
ATATCTGTCACTATACAATC+TGG - chr7_2:57041251-57041270 None:intergenic 30.0%
! TGATTTAGTTTCTGATACAC+AGG + chr7_2:57041391-57041410 Msa1064420:intron 30.0%
AACAGACAGAATTGCTAAAT+TGG + chr7_2:57041704-57041723 Msa1064420:CDS 30.0%
!! TAAGTTTTGGTAGCTTTACT+AGG + chr7_2:57041761-57041780 Msa1064420:CDS 30.0%
AAAGATGATAAAGATGAGGA+TGG + chr7_2:57041859-57041878 Msa1064420:CDS 30.0%
AAGGATTAAAGAAAGCAACA+AGG + chr7_2:57041909-57041928 Msa1064420:CDS 30.0%
AGGATTAAAGAAAGCAACAA+GGG + chr7_2:57041910-57041929 Msa1064420:CDS 30.0%
TAAAATTGCTCAGCAAACAT+TGG - chr7_2:57042066-57042085 None:intergenic 30.0%
! AGCAATTTTACAATGAGAAG+TGG + chr7_2:57042076-57042095 Msa1064420:CDS 30.0%
!!! CTTGTTGATGTTTTGAAGAT+TGG + chr7_2:57042099-57042118 Msa1064420:CDS 30.0%
GAGCAAAAGAAAACAAGTTT+GGG + chr7_2:57042133-57042152 Msa1064420:CDS 30.0%
TAACATTAGTGAAGAGGAAA+TGG + chr7_2:57042158-57042177 Msa1064420:CDS 30.0%
TTTCTTCCATATCCATTTGC+AGG + chr7_2:57040933-57040952 Msa1064420:CDS 35.0%
TGTCAATCATAGGGTTCATA+TGG - chr7_2:57040959-57040978 None:intergenic 35.0%
ATTGGCATGTGTAGTTATGA+TGG - chr7_2:57041018-57041037 None:intergenic 35.0%
!!! TTTTTGGAACCTTGAAGCAT+TGG - chr7_2:57041036-57041055 None:intergenic 35.0%
! TTGTGTTTTCAATACCGTCA+GGG - chr7_2:57041136-57041155 None:intergenic 35.0%
! ATTGTGTTTTCAATACCGTC+AGG - chr7_2:57041137-57041156 None:intergenic 35.0%
ATGCTTGGTAAAATCACTCT+TGG + chr7_2:57041176-57041195 Msa1064420:CDS 35.0%
GTAAAATCACTCTTGGAGTA+AGG + chr7_2:57041183-57041202 Msa1064420:CDS 35.0%
ACAGAACTTCAATAGATTCC+TGG - chr7_2:57041214-57041233 None:intergenic 35.0%
! TGACAGATATGAAGTATCCT+TGG + chr7_2:57041261-57041280 Msa1064420:CDS 35.0%
CTGCAAAACTAAACATTCCA+AGG + chr7_2:57041297-57041316 Msa1064420:CDS 35.0%
TCAATGGTATGAGGTAAACA+AGG - chr7_2:57041428-57041447 None:intergenic 35.0%
TGAACCAATGTATGAATCTG+CGG + chr7_2:57041507-57041526 Msa1064420:CDS 35.0%
CTACAATCGGAATCAAATCA+TGG + chr7_2:57041599-57041618 Msa1064420:CDS 35.0%
TAACAAGGACGATGAAAGAA+AGG + chr7_2:57041648-57041667 Msa1064420:CDS 35.0%
ACGATGAAAGAAAGGCTAAT+AGG + chr7_2:57041656-57041675 Msa1064420:CDS 35.0%
CGATGAAAGAAAGGCTAATA+GGG + chr7_2:57041657-57041676 Msa1064420:CDS 35.0%
GATGAAAGAAAGGCTAATAG+GGG + chr7_2:57041658-57041677 Msa1064420:CDS 35.0%
AGCTTGTAGAAATTGCACAT+GGG + chr7_2:57041797-57041816 Msa1064420:CDS 35.0%
GATAAAGATGAGGATGGAAA+AGG + chr7_2:57041865-57041884 Msa1064420:CDS 35.0%
CAACAAGGGCTATATCATAT+GGG + chr7_2:57041924-57041943 Msa1064420:CDS 35.0%
! GTTCTTGAAAGTGTAAATGC+TGG + chr7_2:57042021-57042040 Msa1064420:CDS 35.0%
! TGTTTTCTTTTGCTCCTACT+GGG - chr7_2:57042128-57042147 None:intergenic 35.0%
! TTGTTTTCTTTTGCTCCTAC+TGG - chr7_2:57042129-57042148 None:intergenic 35.0%
GGAGCAAAAGAAAACAAGTT+TGG + chr7_2:57042132-57042151 Msa1064420:CDS 35.0%
! TTGAAGAAATCCAAAGCACT+TGG + chr7_2:57042351-57042370 Msa1064420:CDS 35.0%
TTTCTTCCATATCCATTTGC+AGG + chr7_2:57040933-57040952 Msa1064420:CDS 35.0%
TGTCAATCATAGGGTTCATA+TGG - chr7_2:57040959-57040978 None:intergenic 35.0%
ATTGGCATGTGTAGTTATGA+TGG - chr7_2:57041018-57041037 None:intergenic 35.0%
!!! TTTTTGGAACCTTGAAGCAT+TGG - chr7_2:57041036-57041055 None:intergenic 35.0%
! TTGTGTTTTCAATACCGTCA+GGG - chr7_2:57041136-57041155 None:intergenic 35.0%
! ATTGTGTTTTCAATACCGTC+AGG - chr7_2:57041137-57041156 None:intergenic 35.0%
ATGCTTGGTAAAATCACTCT+TGG + chr7_2:57041176-57041195 Msa1064420:CDS 35.0%
GTAAAATCACTCTTGGAGTA+AGG + chr7_2:57041183-57041202 Msa1064420:CDS 35.0%
ACAGAACTTCAATAGATTCC+TGG - chr7_2:57041214-57041233 None:intergenic 35.0%
! TGACAGATATGAAGTATCCT+TGG + chr7_2:57041261-57041280 Msa1064420:CDS 35.0%
CTGCAAAACTAAACATTCCA+AGG + chr7_2:57041297-57041316 Msa1064420:CDS 35.0%
TCAATGGTATGAGGTAAACA+AGG - chr7_2:57041428-57041447 None:intergenic 35.0%
TGAACCAATGTATGAATCTG+CGG + chr7_2:57041507-57041526 Msa1064420:CDS 35.0%
CTACAATCGGAATCAAATCA+TGG + chr7_2:57041599-57041618 Msa1064420:CDS 35.0%
TAACAAGGACGATGAAAGAA+AGG + chr7_2:57041648-57041667 Msa1064420:CDS 35.0%
ACGATGAAAGAAAGGCTAAT+AGG + chr7_2:57041656-57041675 Msa1064420:CDS 35.0%
CGATGAAAGAAAGGCTAATA+GGG + chr7_2:57041657-57041676 Msa1064420:CDS 35.0%
GATGAAAGAAAGGCTAATAG+GGG + chr7_2:57041658-57041677 Msa1064420:CDS 35.0%
AGCTTGTAGAAATTGCACAT+GGG + chr7_2:57041797-57041816 Msa1064420:CDS 35.0%
GATAAAGATGAGGATGGAAA+AGG + chr7_2:57041865-57041884 Msa1064420:CDS 35.0%
CAACAAGGGCTATATCATAT+GGG + chr7_2:57041924-57041943 Msa1064420:CDS 35.0%
! GTTCTTGAAAGTGTAAATGC+TGG + chr7_2:57042021-57042040 Msa1064420:CDS 35.0%
! TGTTTTCTTTTGCTCCTACT+GGG - chr7_2:57042128-57042147 None:intergenic 35.0%
! TTGTTTTCTTTTGCTCCTAC+TGG - chr7_2:57042129-57042148 None:intergenic 35.0%
GGAGCAAAAGAAAACAAGTT+TGG + chr7_2:57042132-57042151 Msa1064420:CDS 35.0%
! TTGAAGAAATCCAAAGCACT+TGG + chr7_2:57042351-57042370 Msa1064420:CDS 35.0%
ATATGGCCTGCAAATGGATA+TGG - chr7_2:57040942-57040961 None:intergenic 40.0%
GTCTTGCAGTGTCAATCATA+GGG - chr7_2:57040968-57040987 None:intergenic 40.0%
AGTCTTGCAGTGTCAATCAT+AGG - chr7_2:57040969-57040988 None:intergenic 40.0%
GCAAGACTATTTGCAAAGCA+TGG + chr7_2:57040981-57041000 Msa1064420:CDS 40.0%
ATAGACACTGACATCAGTTC+AGG + chr7_2:57041059-57041078 Msa1064420:CDS 40.0%
! ACCAAGCATTTCAAGTGAAG+TGG - chr7_2:57041165-57041184 None:intergenic 40.0%
GAGCTGCAAAAGTAAATCCT+TGG - chr7_2:57041317-57041336 None:intergenic 40.0%
AAGGGAAAACAATCCGATGA+AGG + chr7_2:57041477-57041496 Msa1064420:CDS 40.0%
GGTTCAAAAATGGCCTTCAT+CGG - chr7_2:57041493-57041512 None:intergenic 40.0%
CTTTCCGCAGATTCATACAT+TGG - chr7_2:57041514-57041533 None:intergenic 40.0%
AATCTGCGGAAAGAAGCTAT+GGG + chr7_2:57041521-57041540 Msa1064420:CDS 40.0%
GGAATCAAATCATGGAGTGT+CGG + chr7_2:57041607-57041626 Msa1064420:CDS 40.0%
ATTTCTACAAGCTGAGCATG+AGG - chr7_2:57041790-57041809 None:intergenic 40.0%
CAGCTTGTAGAAATTGCACA+TGG + chr7_2:57041796-57041815 Msa1064420:CDS 40.0%
AGGTTTCCTGCAAGAATTTG+AGG + chr7_2:57041885-57041904 Msa1064420:CDS 40.0%
TCCTGCAAGAATTTGAGGAA+AGG + chr7_2:57041890-57041909 Msa1064420:CDS 40.0%
TCCTTTCCTCAAATTCTTGC+AGG - chr7_2:57041894-57041913 None:intergenic 40.0%
GCAACAAGGGCTATATCATA+TGG + chr7_2:57041923-57041942 Msa1064420:CDS 40.0%
TGGGACTAACATTAGTGAAG+AGG + chr7_2:57042152-57042171 Msa1064420:CDS 40.0%
TGAAGAGGAAATGGTGAGAA+GGG + chr7_2:57042167-57042186 Msa1064420:CDS 40.0%
! TGAGGCTGTGAAGATTTTGA+TGG + chr7_2:57042200-57042219 Msa1064420:CDS 40.0%
!! GAGGCTGTGAAGATTTTGAT+GGG + chr7_2:57042201-57042220 Msa1064420:CDS 40.0%
ACCAAGAGAGCAAAGAAATG+AGG + chr7_2:57042229-57042248 Msa1064420:CDS 40.0%
TCCTCATTTCTTTGCTCTCT+TGG - chr7_2:57042233-57042252 None:intergenic 40.0%
AGGATGAGAGCAAAGAAACT+TGG + chr7_2:57042249-57042268 Msa1064420:CDS 40.0%
ATATGGCCTGCAAATGGATA+TGG - chr7_2:57040942-57040961 None:intergenic 40.0%
GTCTTGCAGTGTCAATCATA+GGG - chr7_2:57040968-57040987 None:intergenic 40.0%
AGTCTTGCAGTGTCAATCAT+AGG - chr7_2:57040969-57040988 None:intergenic 40.0%
GCAAGACTATTTGCAAAGCA+TGG + chr7_2:57040981-57041000 Msa1064420:CDS 40.0%
ATAGACACTGACATCAGTTC+AGG + chr7_2:57041059-57041078 Msa1064420:CDS 40.0%
! ACCAAGCATTTCAAGTGAAG+TGG - chr7_2:57041165-57041184 None:intergenic 40.0%
GAGCTGCAAAAGTAAATCCT+TGG - chr7_2:57041317-57041336 None:intergenic 40.0%
AAGGGAAAACAATCCGATGA+AGG + chr7_2:57041477-57041496 Msa1064420:CDS 40.0%
GGTTCAAAAATGGCCTTCAT+CGG - chr7_2:57041493-57041512 None:intergenic 40.0%
CTTTCCGCAGATTCATACAT+TGG - chr7_2:57041514-57041533 None:intergenic 40.0%
AATCTGCGGAAAGAAGCTAT+GGG + chr7_2:57041521-57041540 Msa1064420:CDS 40.0%
GGAATCAAATCATGGAGTGT+CGG + chr7_2:57041607-57041626 Msa1064420:CDS 40.0%
ATTTCTACAAGCTGAGCATG+AGG - chr7_2:57041790-57041809 None:intergenic 40.0%
CAGCTTGTAGAAATTGCACA+TGG + chr7_2:57041796-57041815 Msa1064420:CDS 40.0%
AGGTTTCCTGCAAGAATTTG+AGG + chr7_2:57041885-57041904 Msa1064420:CDS 40.0%
TCCTGCAAGAATTTGAGGAA+AGG + chr7_2:57041890-57041909 Msa1064420:CDS 40.0%
TCCTTTCCTCAAATTCTTGC+AGG - chr7_2:57041894-57041913 None:intergenic 40.0%
GCAACAAGGGCTATATCATA+TGG + chr7_2:57041923-57041942 Msa1064420:CDS 40.0%
TGGGACTAACATTAGTGAAG+AGG + chr7_2:57042152-57042171 Msa1064420:CDS 40.0%
TGAAGAGGAAATGGTGAGAA+GGG + chr7_2:57042167-57042186 Msa1064420:CDS 40.0%
! TGAGGCTGTGAAGATTTTGA+TGG + chr7_2:57042200-57042219 Msa1064420:CDS 40.0%
!! GAGGCTGTGAAGATTTTGAT+GGG + chr7_2:57042201-57042220 Msa1064420:CDS 40.0%
ACCAAGAGAGCAAAGAAATG+AGG + chr7_2:57042229-57042248 Msa1064420:CDS 40.0%
TCCTCATTTCTTTGCTCTCT+TGG - chr7_2:57042233-57042252 None:intergenic 40.0%
AGGATGAGAGCAAAGAAACT+TGG + chr7_2:57042249-57042268 Msa1064420:CDS 40.0%
CTACACATGCCAATGCTTCA+AGG + chr7_2:57041024-57041043 Msa1064420:CDS 45.0%
GCCACTTCACTTGAAATGCT+TGG + chr7_2:57041161-57041180 Msa1064420:CDS 45.0%
! GCAGCTTTGTGATTGGGAAA+GGG + chr7_2:57041459-57041478 Msa1064420:intron 45.0%
GAATCTGCGGAAAGAAGCTA+TGG + chr7_2:57041520-57041539 Msa1064420:CDS 45.0%
TTGTTAGCCCAAGCTGAAAC+TGG - chr7_2:57041634-57041653 None:intergenic 45.0%
AGTTTCAGCTTGGGCTAACA+AGG + chr7_2:57041633-57041652 Msa1064420:CDS 45.0%
AAAGGCTAATAGGGGACACA+TGG + chr7_2:57041666-57041685 Msa1064420:CDS 45.0%
GGACACATGGAGAAAAGCTT+AGG + chr7_2:57041679-57041698 Msa1064420:CDS 45.0%
GCACATGGGCTTGAAAATTC+AGG + chr7_2:57041811-57041830 Msa1064420:CDS 45.0%
AGGGCTATATCATATGGGAC+TGG + chr7_2:57041929-57041948 Msa1064420:CDS 45.0%
GGGCTATATCATATGGGACT+GGG + chr7_2:57041930-57041949 Msa1064420:CDS 45.0%
TGGTCCAATATCAGAAGCTG+TGG - chr7_2:57041958-57041977 None:intergenic 45.0%
ACAATGAGTCACAAACCCTC+CGG - chr7_2:57041989-57042008 None:intergenic 45.0%
GGTTTGTGACTCATTGTGGT+TGG + chr7_2:57041992-57042011 Msa1064420:CDS 45.0%
AACATTGGCCACGTGATCAT+TGG - chr7_2:57042051-57042070 None:intergenic 45.0%
! TTGAAGATTGGTGTCCCAGT+AGG + chr7_2:57042111-57042130 Msa1064420:CDS 45.0%
GTGAAGAGGAAATGGTGAGA+AGG + chr7_2:57042166-57042185 Msa1064420:CDS 45.0%
ACCTTCCTCTATAGTCCTCT+TGG - chr7_2:57042283-57042302 None:intergenic 45.0%
AAGAGGACTATAGAGGAAGG+TGG + chr7_2:57042282-57042301 Msa1064420:CDS 45.0%
TGCTTTCTCACCAAGTGCTT+TGG - chr7_2:57042364-57042383 None:intergenic 45.0%
CTACACATGCCAATGCTTCA+AGG + chr7_2:57041024-57041043 Msa1064420:CDS 45.0%
GCCACTTCACTTGAAATGCT+TGG + chr7_2:57041161-57041180 Msa1064420:CDS 45.0%
! GCAGCTTTGTGATTGGGAAA+GGG + chr7_2:57041459-57041478 Msa1064420:intron 45.0%
GAATCTGCGGAAAGAAGCTA+TGG + chr7_2:57041520-57041539 Msa1064420:CDS 45.0%
TTGTTAGCCCAAGCTGAAAC+TGG - chr7_2:57041634-57041653 None:intergenic 45.0%
AGTTTCAGCTTGGGCTAACA+AGG + chr7_2:57041633-57041652 Msa1064420:CDS 45.0%
AAAGGCTAATAGGGGACACA+TGG + chr7_2:57041666-57041685 Msa1064420:CDS 45.0%
GGACACATGGAGAAAAGCTT+AGG + chr7_2:57041679-57041698 Msa1064420:CDS 45.0%
GCACATGGGCTTGAAAATTC+AGG + chr7_2:57041811-57041830 Msa1064420:CDS 45.0%
AGGGCTATATCATATGGGAC+TGG + chr7_2:57041929-57041948 Msa1064420:CDS 45.0%
GGGCTATATCATATGGGACT+GGG + chr7_2:57041930-57041949 Msa1064420:CDS 45.0%
TGGTCCAATATCAGAAGCTG+TGG - chr7_2:57041958-57041977 None:intergenic 45.0%
ACAATGAGTCACAAACCCTC+CGG - chr7_2:57041989-57042008 None:intergenic 45.0%
GGTTTGTGACTCATTGTGGT+TGG + chr7_2:57041992-57042011 Msa1064420:CDS 45.0%
AACATTGGCCACGTGATCAT+TGG - chr7_2:57042051-57042070 None:intergenic 45.0%
! TTGAAGATTGGTGTCCCAGT+AGG + chr7_2:57042111-57042130 Msa1064420:CDS 45.0%
GTGAAGAGGAAATGGTGAGA+AGG + chr7_2:57042166-57042185 Msa1064420:CDS 45.0%
ACCTTCCTCTATAGTCCTCT+TGG - chr7_2:57042283-57042302 None:intergenic 45.0%
AAGAGGACTATAGAGGAAGG+TGG + chr7_2:57042282-57042301 Msa1064420:CDS 45.0%
TGCTTTCTCACCAAGTGCTT+TGG - chr7_2:57042364-57042383 None:intergenic 45.0%
GGGTTCATATGGCCTGCAAA+TGG - chr7_2:57040948-57040967 None:intergenic 50.0%
CAGTTCCCTTCAGCTCAAGT+TGG + chr7_2:57041107-57041126 Msa1064420:CDS 50.0%
GGAGACCAACTTGAGCTGAA+GGG - chr7_2:57041115-57041134 None:intergenic 50.0%
TCTTGGAGTAAGGATGCTCC+AGG + chr7_2:57041193-57041212 Msa1064420:CDS 50.0%
CGGGTCATCTCAATGGTATG+AGG - chr7_2:57041437-57041456 None:intergenic 50.0%
TCCCAATCACAAAGCTGCGA+CGG - chr7_2:57041457-57041476 None:intergenic 50.0%
! CGCAGCTTTGTGATTGGGAA+AGG + chr7_2:57041458-57041477 Msa1064420:intron 50.0%
TGTCGGACCAGTTTCAGCTT+GGG + chr7_2:57041624-57041643 Msa1064420:CDS 50.0%
GGCACCACAGCTTCTGATAT+TGG + chr7_2:57041951-57041970 Msa1064420:CDS 50.0%
ATATTGGACCACCCTGCAAC+CGG + chr7_2:57041967-57041986 Msa1064420:CDS 50.0%
GGAGGGTTTGTGACTCATTG+TGG + chr7_2:57041988-57042007 Msa1064420:CDS 50.0%
! CTGGTTTGCCAATGATCACG+TGG + chr7_2:57042040-57042059 Msa1064420:CDS 50.0%
GAGAAGGGAAGAGATAGCTG+AGG + chr7_2:57042182-57042201 Msa1064420:CDS 50.0%
!! AACTTGGTGATGCTGCCAAG+AGG + chr7_2:57042265-57042284 Msa1064420:CDS 50.0%
TGCTGCCAAGAGGACTATAG+AGG + chr7_2:57042275-57042294 Msa1064420:CDS 50.0%
GCCAAGAGGACTATAGAGGA+AGG + chr7_2:57042279-57042298 Msa1064420:CDS 50.0%
GGGTTCATATGGCCTGCAAA+TGG - chr7_2:57040948-57040967 None:intergenic 50.0%
CAGTTCCCTTCAGCTCAAGT+TGG + chr7_2:57041107-57041126 Msa1064420:CDS 50.0%
GGAGACCAACTTGAGCTGAA+GGG - chr7_2:57041115-57041134 None:intergenic 50.0%
TCTTGGAGTAAGGATGCTCC+AGG + chr7_2:57041193-57041212 Msa1064420:CDS 50.0%
CGGGTCATCTCAATGGTATG+AGG - chr7_2:57041437-57041456 None:intergenic 50.0%
TCCCAATCACAAAGCTGCGA+CGG - chr7_2:57041457-57041476 None:intergenic 50.0%
! CGCAGCTTTGTGATTGGGAA+AGG + chr7_2:57041458-57041477 Msa1064420:intron 50.0%
TGTCGGACCAGTTTCAGCTT+GGG + chr7_2:57041624-57041643 Msa1064420:CDS 50.0%
GGCACCACAGCTTCTGATAT+TGG + chr7_2:57041951-57041970 Msa1064420:CDS 50.0%
ATATTGGACCACCCTGCAAC+CGG + chr7_2:57041967-57041986 Msa1064420:CDS 50.0%
GGAGGGTTTGTGACTCATTG+TGG + chr7_2:57041988-57042007 Msa1064420:CDS 50.0%
! CTGGTTTGCCAATGATCACG+TGG + chr7_2:57042040-57042059 Msa1064420:CDS 50.0%
GAGAAGGGAAGAGATAGCTG+AGG + chr7_2:57042182-57042201 Msa1064420:CDS 50.0%
!! AACTTGGTGATGCTGCCAAG+AGG + chr7_2:57042265-57042284 Msa1064420:CDS 50.0%
TGCTGCCAAGAGGACTATAG+AGG + chr7_2:57042275-57042294 Msa1064420:CDS 50.0%
GCCAAGAGGACTATAGAGGA+AGG + chr7_2:57042279-57042298 Msa1064420:CDS 50.0%
GGGAGACCAACTTGAGCTGA+AGG - chr7_2:57041116-57041135 None:intergenic 55.0%
!! GCTCAAGTTGGTCTCCCTGA+CGG + chr7_2:57041119-57041138 Msa1064420:CDS 55.0%
!! GCAGCTGATTCGACAGTCCA+AGG - chr7_2:57041281-57041300 None:intergenic 55.0%
! ACCCGTCGCAGCTTTGTGAT+TGG + chr7_2:57041452-57041471 Msa1064420:intron 55.0%
CCCAATCACAAAGCTGCGAC+GGG - chr7_2:57041456-57041475 None:intergenic 55.0%
! CCCGTCGCAGCTTTGTGATT+GGG + chr7_2:57041453-57041472 Msa1064420:intron 55.0%
GTGTCGGACCAGTTTCAGCT+TGG + chr7_2:57041623-57041642 Msa1064420:CDS 55.0%
TCACAAACCCTCCGGTTGCA+GGG - chr7_2:57041981-57042000 None:intergenic 55.0%
GGGAGACCAACTTGAGCTGA+AGG - chr7_2:57041116-57041135 None:intergenic 55.0%
!! GCTCAAGTTGGTCTCCCTGA+CGG + chr7_2:57041119-57041138 Msa1064420:CDS 55.0%
!! GCAGCTGATTCGACAGTCCA+AGG - chr7_2:57041281-57041300 None:intergenic 55.0%
! ACCCGTCGCAGCTTTGTGAT+TGG + chr7_2:57041452-57041471 Msa1064420:intron 55.0%
CCCAATCACAAAGCTGCGAC+GGG - chr7_2:57041456-57041475 None:intergenic 55.0%
! CCCGTCGCAGCTTTGTGATT+GGG + chr7_2:57041453-57041472 Msa1064420:intron 55.0%
GTGTCGGACCAGTTTCAGCT+TGG + chr7_2:57041623-57041642 Msa1064420:CDS 55.0%
TCACAAACCCTCCGGTTGCA+GGG - chr7_2:57041981-57042000 None:intergenic 55.0%
GCTGCGACGGGTCATCTCAA+TGG - chr7_2:57041444-57041463 None:intergenic 60.0%
GTCACAAACCCTCCGGTTGC+AGG - chr7_2:57041982-57042001 None:intergenic 60.0%
GCTGCGACGGGTCATCTCAA+TGG - chr7_2:57041444-57041463 None:intergenic 60.0%
GTCACAAACCCTCCGGTTGC+AGG - chr7_2:57041982-57042001 None:intergenic 60.0%
TTGGACCACCCTGCAACCGG+AGG + chr7_2:57041970-57041989 Msa1064420:CDS 65.0%
TGGACCACCCTGCAACCGGA+GGG + chr7_2:57041971-57041990 Msa1064420:CDS 65.0%
CAAACCCTCCGGTTGCAGGG+TGG - chr7_2:57041978-57041997 None:intergenic 65.0%
TTGGACCACCCTGCAACCGG+AGG + chr7_2:57041970-57041989 Msa1064420:CDS 65.0%
TGGACCACCCTGCAACCGGA+GGG + chr7_2:57041971-57041990 Msa1064420:CDS 65.0%
CAAACCCTCCGGTTGCAGGG+TGG - chr7_2:57041978-57041997 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 57040894 57042389 57040894 ID=Msa1064420;Name=Msa1064420
chr7_2 mRNA 57040894 57042389 57040894 ID=Msa1064420-mRNA-1;Parent=Msa1064420;Name=Msa1064420-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|0|0|1|1|1|2|0|466
chr7_2 exon 57040894 57041367 57040894 ID=Msa1064420-mRNA-1:exon:10829;Parent=Msa1064420-mRNA-1
chr7_2 exon 57041463 57042389 57041463 ID=Msa1064420-mRNA-1:exon:10830;Parent=Msa1064420-mRNA-1
chr7_2 CDS 57040894 57041367 57040894 ID=Msa1064420-mRNA-1:cds;Parent=Msa1064420-mRNA-1
chr7_2 CDS 57041463 57042389 57041463 ID=Msa1064420-mRNA-1:cds;Parent=Msa1064420-mRNA-1
Gene Sequence

>Msa1064420

ATGGCGTCTCAACAATCCAATAACAAAATTCATGTAGTTTTTCTTCCATATCCATTTGCAGGCCATATGAACCCTATGATTGACACTGCAAGACTATTTGCAAAGCATGGTGTTAATGTTACCATCATAACTACACATGCCAATGCTTCAAGGTTCCAAAAATCAATAGACACTGACATCAGTTCAGGATACTCCATCAAAACTCAACTTATTCAGTTCCCTTCAGCTCAAGTTGGTCTCCCTGACGGTATTGAAAACACAATCGATGCCACTTCACTTGAAATGCTTGGTAAAATCACTCTTGGAGTAAGGATGCTCCAGGAATCTATTGAAGTTCTGTTTAAAGAACTTCAACCAGATTGTATAGTGACAGATATGAAGTATCCTTGGACTGTCGAATCAGCTGCAAAACTAAACATTCCAAGGATTTACTTTTGCAGCTCAAGCTACTTCTCCGAATGTGCAATTTACTTTCTTTGTGATTGGGAAAGGGAAAACAATCCGATGAAGGCCATTTTTGAACCAATGTATGAATCTGCGGAAAGAAGCTATGGGTCACTATACAACAGTTTTCATGAACTTGAAAGTGATTATGAGAAACTTTATAAAACTACAATCGGAATCAAATCATGGAGTGTCGGACCAGTTTCAGCTTGGGCTAACAAGGACGATGAAAGAAAGGCTAATAGGGGACACATGGAGAAAAGCTTAGGAAAACAGACAGAATTGCTAAATTGGCTTAACTCGAAGCAAAATGAGTCTGTATTGTATGTAAGTTTTGGTAGCTTTACTAGGTTTCCTCATGCTCAGCTTGTAGAAATTGCACATGGGCTTGAAAATTCAGGTCATAATTTTATATGGGTTATAAAAAAAGATGATAAAGATGAGGATGGAAAAGGTTTCCTGCAAGAATTTGAGGAAAGGATTAAAGAAAGCAACAAGGGCTATATCATATGGGACTGGGCACCACAGCTTCTGATATTGGACCACCCTGCAACCGGAGGGTTTGTGACTCATTGTGGTTGGAACTCAGTTCTTGAAAGTGTAAATGCTGGTTTGCCAATGATCACGTGGCCAATGTTTGCTGAGCAATTTTACAATGAGAAGTGGCTTGTTGATGTTTTGAAGATTGGTGTCCCAGTAGGAGCAAAAGAAAACAAGTTTGGGACTAACATTAGTGAAGAGGAAATGGTGAGAAGGGAAGAGATAGCTGAGGCTGTGAAGATTTTGATGGGAAGTGACCAAGAGAGCAAAGAAATGAGGATGAGAGCAAAGAAACTTGGTGATGCTGCCAAGAGGACTATAGAGGAAGGTGGAGACTCTTACAACAACTTGATTCAGTTGATTGATGAGCTGAAATCATTGAAGAAATCCAAAGCACTTGGTGAGAAAGCAGATTAG

Protein sequence

>Msa1064420

MASQQSNNKIHVVFLPYPFAGHMNPMIDTARLFAKHGVNVTIITTHANASRFQKSIDTDISSGYSIKTQLIQFPSAQVGLPDGIENTIDATSLEMLGKITLGVRMLQESIEVLFKELQPDCIVTDMKYPWTVESAAKLNIPRIYFCSSSYFSECAIYFLCDWERENNPMKAIFEPMYESAERSYGSLYNSFHELESDYEKLYKTTIGIKSWSVGPVSAWANKDDERKANRGHMEKSLGKQTELLNWLNSKQNESVLYVSFGSFTRFPHAQLVEIAHGLENSGHNFIWVIKKDDKDEDGKGFLQEFEERIKESNKGYIIWDWAPQLLILDHPATGGFVTHCGWNSVLESVNAGLPMITWPMFAEQFYNEKWLVDVLKIGVPVGAKENKFGTNISEEEMVRREEIAEAVKILMGSDQESKEMRMRAKKLGDAAKRTIEEGGDSYNNLIQLIDELKSLKKSKALGEKAD*