AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1025650


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1025650 MtrunA17_Chr7g0243951 85.542 498 71 1 1 498 1 497 0.0 890
Msa1025650 MtrunA17_Chr7g0243861 87.726 497 61 0 2 498 5 501 0.0 887
Msa1025650 MtrunA17_Chr7g0243931 84.739 498 76 0 1 498 7 504 0.0 885
Msa1025650 MtrunA17_Chr4g0060511 77.246 501 111 1 1 498 1 501 0.0 816
Msa1025650 MtrunA17_Chr7g0243851 77.510 498 70 1 1 498 1 456 0.0 789
Msa1025650 MtrunA17_Chr7g0243631 75.050 501 121 3 1 498 1 500 0.0 782
Msa1025650 MtrunA17_Chr7g0243681 73.896 498 123 2 1 497 1 492 0.0 771
Msa1025650 MtrunA17_Chr7g0243771 73.428 493 122 2 1 493 1 484 0.0 764
Msa1025650 MtrunA17_Chr7g0243801 72.414 493 128 2 1 493 1 485 0.0 758
Msa1025650 MtrunA17_Chr7g0243761 72.691 498 106 2 1 498 1 468 0.0 711
Msa1025650 MtrunA17_Chr7g0235051 71.687 498 110 2 1 498 1 467 0.0 700
Msa1025650 MtrunA17_Chr7g0243871 65.377 491 158 2 1 491 1 479 0.0 668
Msa1025650 MtrunA17_Chr7g0243781 64.458 498 164 3 1 496 1 487 0.0 661
Msa1025650 MtrunA17_Chr5g0401851 51.724 493 228 3 5 492 4 491 0.0 527
Msa1025650 MtrunA17_Chr7g0243811 61.520 408 143 2 23 430 1 394 4.46e-180 510
Msa1025650 MtrunA17_Chr8g0355221 50.924 487 227 5 10 491 14 493 1.84e-175 503
Msa1025650 MtrunA17_Chr5g0416741 51.753 485 223 4 8 488 10 487 7.74e-170 488
Msa1025650 MtrunA17_Chr1g0165701 49.695 491 234 6 10 496 14 495 2.11e-168 484
Msa1025650 MtrunA17_Chr6g0463891 49.281 487 242 4 10 494 11 494 1.20e-162 470
Msa1025650 MtrunA17_Chr7g0243611 69.132 311 81 2 126 436 1 296 2.21e-158 451
Msa1025650 MtrunA17_Chr5g0416821 46.200 500 239 7 5 494 4 483 9.03e-153 444
Msa1025650 MtrunA17_Chr7g0243711 80.843 261 49 1 238 498 71 330 1.74e-150 432
Msa1025650 MtrunA17_Chr7g0243711 82.278 79 14 0 1 79 1 79 1.93e-36 137
Msa1025650 MtrunA17_Chr4g0044511 43.064 483 260 8 7 486 36 506 1.40e-137 406
Msa1025650 MtrunA17_Chr8g0366391 43.936 503 261 10 1 496 1 489 1.21e-136 403
Msa1025650 MtrunA17_Chr4g0044501 44.399 491 256 10 1 487 1 478 3.15e-134 397
Msa1025650 MtrunA17_Chr4g0066221 39.683 504 278 10 1 493 1 489 8.55e-118 355
Msa1025650 MtrunA17_Chr4g0066261 40.557 503 276 9 1 493 1 490 1.21e-117 355
Msa1025650 MtrunA17_Chr4g0066281 41.478 487 252 9 14 493 15 475 1.53e-117 354
Msa1025650 MtrunA17_Chr4g0044521 41.408 483 261 8 8 487 6 469 3.36e-117 353
Msa1025650 MtrunA17_Chr4g0066151 41.393 488 258 10 12 491 19 486 1.10e-116 352
Msa1025650 MtrunA17_Chr5g0419771 40.121 496 274 9 6 488 31 516 1.01e-115 351
Msa1025650 MtrunA17_Chr4g0066201 40.530 491 259 10 10 492 17 482 4.43e-115 348
Msa1025650 MtrunA17_Chr4g0014061 36.777 484 296 3 10 493 8 481 6.69e-115 347
Msa1025650 MtrunA17_Chr7g0275681 40.625 480 268 8 11 484 12 480 9.17e-115 347
Msa1025650 MtrunA17_Chr4g0066131 40.637 502 269 10 1 493 2 483 1.35e-114 347
Msa1025650 MtrunA17_Chr4g0011051 39.315 496 274 9 9 488 7 491 4.00e-114 346
Msa1025650 MtrunA17_Chr1g0179901 37.897 504 290 10 1 491 7 500 7.32e-113 343
Msa1025650 MtrunA17_Chr7g0265041 41.650 497 268 12 1 484 1 488 8.82e-113 342
Msa1025650 MtrunA17_Chr5g0419761 40.733 491 275 10 10 489 8 493 1.53e-112 342
Msa1025650 MtrunA17_Chr4g0066171 39.228 492 265 10 10 493 20 485 2.91e-110 335
Msa1025650 MtrunA17_Chr8g0374901 39.431 492 275 9 9 493 12 487 2.92e-110 335
Msa1025650 MtrunA17_Chr8g0374971 39.220 487 277 7 14 493 15 489 4.29e-110 335
Msa1025650 MtrunA17_Chr8g0350881 39.308 491 279 7 10 493 11 489 7.52e-110 335
Msa1025650 MtrunA17_Chr7g0243911 75.000 204 51 0 266 469 12 215 1.42e-108 322
Msa1025650 MtrunA17_Chr7g0265141 38.618 492 285 9 1 483 1 484 1.64e-108 331
Msa1025650 MtrunA17_Chr7g0265111 38.218 505 289 10 3 494 31 525 1.68e-108 333
Msa1025650 MtrunA17_Chr8g0374931 38.812 505 278 11 1 491 1 488 4.14e-107 328
Msa1025650 MtrunA17_Chr7g0265151 38.492 504 269 15 1 484 1 483 5.22e-107 327
Msa1025650 MtrunA17_Chr4g0044481 43.659 410 195 8 11 417 27 403 1.96e-105 321
Msa1025650 MtrunA17_Chr6g0463861 39.264 489 266 12 9 488 11 477 6.04e-105 322
Msa1025650 MtrunA17_Chr7g0243921 70.952 210 56 1 2 211 31 235 7.31e-105 313
Msa1025650 MtrunA17_Chr7g0265101 37.725 501 282 12 9 493 7 493 4.21e-104 320
Msa1025650 MtrunA17_Chr7g0265051 38.889 504 266 14 9 491 7 489 2.83e-102 315
Msa1025650 MtrunA17_Chr8g0374941 39.388 490 276 9 9 491 949 1424 1.05e-101 333
Msa1025650 MtrunA17_Chr8g0374941 37.736 477 278 8 1 470 1 465 1.30e-95 316
Msa1025650 MtrunA17_Chr8g0374941 38.055 473 274 6 1 466 466 926 4.28e-92 306
Msa1025650 MtrunA17_Chr2g0294921 38.189 508 277 11 1 491 150 637 2.77e-101 317
Msa1025650 MtrunA17_Chr5g0428081 37.626 497 275 10 9 491 11 486 2.83e-101 312
Msa1025650 MtrunA17_Chr6g0463851 37.600 500 280 12 1 485 1 483 4.25e-101 312
Msa1025650 MtrunA17_Chr2g0294931 37.059 510 284 11 1 493 1 490 9.70e-101 311
Msa1025650 MtrunA17_Chr7g0218311 37.747 506 265 11 9 493 16 492 9.82e-101 311
Msa1025650 MtrunA17_Chr5g0410941 36.727 501 290 9 1 491 13 496 8.34e-100 309
Msa1025650 MtrunA17_Chr7g0231631 50.181 277 113 5 216 488 8 263 3.15e-82 256
Msa1025650 MtrunA17_Chr2g0294941 36.605 377 206 11 111 469 3 364 5.10e-69 225
Msa1025650 MtrunA17_Chr5g0440421 27.921 505 331 10 3 487 2 493 2.16e-64 216
Msa1025650 MtrunA17_Chr8g0361411 31.405 484 296 11 9 488 6 457 5.05e-61 207
Msa1025650 MtrunA17_Chr6g0454341 30.118 508 291 16 6 484 5 477 1.65e-59 203
Msa1025650 MtrunA17_Chr3g0078841 29.528 508 294 14 6 484 5 477 3.52e-59 202
Msa1025650 MtrunA17_Chr7g0275511 32.460 496 268 18 12 480 16 471 6.64e-58 199
Msa1025650 MtrunA17_Chr2g0329111 28.980 490 286 14 9 470 4 459 7.74e-58 199
Msa1025650 MtrunA17_Chr2g0307961 32.505 483 290 15 11 484 13 468 1.81e-57 197
Msa1025650 MtrunA17_Chr6g0454331 28.324 519 290 14 6 484 2 478 3.26e-57 197
Msa1025650 MtrunA17_Chr6g0464881 27.291 502 309 16 1 489 1 459 5.17e-57 196
Msa1025650 MtrunA17_Chr7g0250001 28.884 502 275 18 8 484 3 447 1.21e-56 195
Msa1025650 MtrunA17_Chr6g0454191 28.682 516 297 16 3 484 2 480 2.25e-56 195
Msa1025650 MtrunA17_Chr6g0454261 29.183 514 299 17 9 492 8 486 2.66e-56 195
Msa1025650 MtrunA17_Chr2g0278711 28.125 512 312 14 1 488 1 480 2.29e-55 192
Msa1025650 MtrunA17_Chr7g0243721 65.441 136 46 1 186 321 1 135 2.36e-55 182
Msa1025650 MtrunA17_Chr6g0454361 29.377 514 283 17 9 484 9 480 2.54e-55 192
Msa1025650 MtrunA17_Chr6g0454321 28.858 499 299 17 6 479 5 472 3.86e-55 195
Msa1025650 MtrunA17_Chr7g0217881 29.283 502 281 14 9 484 8 461 5.82e-55 191
Msa1025650 MtrunA17_Chr6g0464861 28.831 496 298 16 1 484 1 453 1.03e-54 190
Msa1025650 MtrunA17_Chr3g0118671 29.058 499 302 14 9 484 4 473 1.07e-54 190
Msa1025650 MtrunA17_Chr3g0098111 28.629 496 311 17 6 486 4 471 1.39e-54 190
Msa1025650 MtrunA17_Chr4g0050341 30.600 500 295 15 11 485 19 491 1.59e-54 190
Msa1025650 MtrunA17_Chr6g0454291 29.354 511 293 14 6 484 2 476 4.15e-54 189
Msa1025650 MtrunA17_Chr8g0359821 28.880 509 302 16 3 484 2 477 5.73e-54 189
Msa1025650 MtrunA17_Chr6g0462551 30.785 497 279 17 12 482 5 462 8.48e-54 188
Msa1025650 MtrunA17_Chr6g0464841 28.400 500 296 15 1 484 1 454 1.29e-53 187
Msa1025650 MtrunA17_Chr3g0118711 29.666 509 304 15 1 484 1 480 1.41e-53 187
Msa1025650 MtrunA17_Chr6g0454401 28.488 516 298 15 3 484 2 480 1.54e-53 187
Msa1025650 MtrunA17_Chr8g0336331 28.175 504 305 16 6 484 5 476 1.78e-53 187
Msa1025650 MtrunA17_Chr3g0118771 28.791 521 298 15 3 484 2 488 2.83e-53 187
Msa1025650 MtrunA17_Chr6g0464871 27.767 497 303 16 1 484 13 466 5.90e-53 186
Msa1025650 MtrunA17_Chr7g0249931 27.593 511 276 20 6 484 35 483 1.16e-52 185
Msa1025650 MtrunA17_Chr6g0453951 28.016 514 294 14 7 484 53 526 1.48e-52 186
Msa1025650 MtrunA17_Chr6g0454301 27.930 512 297 14 6 484 258 730 3.17e-52 188
Msa1025650 MtrunA17_Chr6g0454301 35.366 246 131 7 243 483 6 228 5.42e-35 139
Msa1025650 MtrunA17_Chr1g0207971 26.962 497 311 16 6 490 3 459 4.45e-52 183
Msa1025650 MtrunA17_Chr7g0249981 26.061 495 312 13 1 484 15 466 5.73e-52 183
Msa1025650 MtrunA17_Chr6g0454211 28.210 514 301 14 3 484 289 766 7.22e-52 188
Msa1025650 MtrunA17_Chr6g0454211 26.838 272 150 8 129 388 2 236 8.30e-20 93.2
Msa1025650 MtrunA17_Chr6g0454201 29.389 507 292 16 9 484 9 480 9.04e-52 182
Msa1025650 MtrunA17_Chr6g0464921 26.923 494 312 14 1 484 1 455 1.14e-51 182
Msa1025650 MtrunA17_Chr3g0118691 29.159 511 298 16 3 484 7 482 1.52e-51 182
Msa1025650 MtrunA17_Chr3g0118701 27.921 505 312 14 3 484 7 482 1.69e-51 182
Msa1025650 MtrunA17_Chr6g0454181 28.846 520 290 18 3 484 2 479 3.70e-51 181
Msa1025650 MtrunA17_Chr6g0454141 27.063 521 298 14 3 484 2 479 4.89e-51 181
Msa1025650 MtrunA17_Chr8g0357361 41.825 263 123 10 159 417 19 255 5.20e-51 174
Msa1025650 MtrunA17_Chr5g0426431 30.478 502 295 16 6 484 7 477 7.55e-51 180
Msa1025650 MtrunA17_Chr7g0232411 30.859 512 272 23 10 487 5 468 1.01e-50 179
Msa1025650 MtrunA17_Chr3g0092641 30.159 504 294 18 6 484 7 477 1.41e-50 179
Msa1025650 MtrunA17_Chr5g0442521 27.539 512 292 17 9 482 3 473 1.62e-50 179
Msa1025650 MtrunA17_Chr7g0232391 30.452 509 270 22 10 483 5 464 2.69e-50 178
Msa1025650 MtrunA17_Chr5g0414331 28.340 494 301 15 1 484 3 453 3.45e-50 178
Msa1025650 MtrunA17_Chr8g0370941 28.571 511 284 18 11 477 8 481 3.82e-50 179
Msa1025650 MtrunA17_Chr5g0420801 29.058 499 298 17 6 487 2 461 4.36e-50 177
Msa1025650 MtrunA17_Chr1g0173121 29.158 487 282 17 6 473 9 451 9.35e-50 177
Msa1025650 MtrunA17_Chr5g0414321 27.856 499 307 14 1 489 1 456 1.10e-49 176
Msa1025650 MtrunA17_Chr5g0448521 27.745 501 297 13 9 482 3 465 2.18e-49 176
Msa1025650 MtrunA17_Chr5g0442541 28.743 501 290 15 9 482 3 463 2.25e-49 176
Msa1025650 MtrunA17_Chr3g0112771 28.571 504 303 14 1 492 1 459 2.46e-49 176
Msa1025650 MtrunA17_Chr6g0454351 29.412 510 279 21 5 484 6 464 4.35e-49 175
Msa1025650 MtrunA17_Chr8g0361371 29.862 509 287 18 1 481 1 467 4.77e-49 175
Msa1025650 MtrunA17_Chr8g0377921 27.593 482 313 10 12 482 5 461 8.67e-49 174
Msa1025650 MtrunA17_Chr6g0453961 27.606 518 288 18 9 484 17 489 1.01e-48 174
Msa1025650 MtrunA17_Chr1g0159551 30.228 483 279 18 6 473 9 448 1.16e-48 174
Msa1025650 MtrunA17_Chr3g0121991 28.515 505 302 14 11 489 79 550 1.29e-48 176
Msa1025650 MtrunA17_Chr5g0442491 28.155 515 284 16 9 482 3 472 1.63e-48 174
Msa1025650 MtrunA17_Chr8g0380531 28.310 491 308 12 4 485 3 458 4.48e-48 172
Msa1025650 MtrunA17_Chr3g0118661 29.518 498 298 13 9 483 11 478 5.55e-48 172
Msa1025650 MtrunA17_Chr7g0218821 27.950 483 298 14 11 482 5 448 7.52e-48 171
Msa1025650 MtrunA17_Chr8g0347281 29.592 490 284 17 12 480 19 468 1.16e-47 171
Msa1025650 MtrunA17_Chr6g0452771 29.297 512 298 15 3 484 2 479 1.17e-47 171
Msa1025650 MtrunA17_Chr5g0442581 28.175 504 300 16 9 482 3 474 1.33e-47 172
Msa1025650 MtrunA17_Chr6g0454151 27.530 494 316 14 9 484 8 477 1.52e-47 171
Msa1025650 MtrunA17_Chr5g0423981 28.543 501 269 19 9 484 8 444 1.53e-47 170
Msa1025650 MtrunA17_Chr8g0369341 29.051 506 299 17 6 487 2 471 2.32e-47 171
Msa1025650 MtrunA17_Chr5g0442561 25.397 504 310 14 9 482 3 470 4.56e-47 170
Msa1025650 MtrunA17_Chr7g0218841 27.495 491 277 19 11 481 6 437 1.11e-46 168
Msa1025650 MtrunA17_Chr1g0207861 26.854 499 316 18 6 486 3 470 1.37e-46 169
Msa1025650 MtrunA17_Chr3g0079731 36.184 304 147 10 203 481 196 477 2.69e-46 168
Msa1025650 MtrunA17_Chr1g0161351 25.875 514 315 16 1 488 28 501 2.82e-46 168
Msa1025650 MtrunA17_Chr7g0231651 43.434 198 107 2 5 197 4 201 7.23e-46 159
Msa1025650 MtrunA17_Chr5g0442601 28.628 503 299 15 9 482 402 873 7.37e-46 171
Msa1025650 MtrunA17_Chr5g0442601 31.068 309 156 8 121 411 64 333 5.31e-31 127
Msa1025650 MtrunA17_Chr7g0218831 27.066 484 287 15 11 481 6 436 7.96e-46 166
Msa1025650 MtrunA17_Chr8g0335161 29.800 500 286 19 7 480 2 462 8.51e-46 166
Msa1025650 MtrunA17_Chr8g0334831 29.492 512 282 16 9 481 4 475 9.95e-46 166
Msa1025650 MtrunA17_Chr6g0454121 28.180 511 304 16 3 484 2 478 1.27e-45 166
Msa1025650 MtrunA17_Chr6g0462531 29.817 493 288 19 12 480 5 463 2.59e-45 165
Msa1025650 MtrunA17_Chr8g0347271 29.293 495 279 16 12 480 20 469 2.87e-45 165
Msa1025650 MtrunA17_Chr1g0207981 26.369 493 329 11 2 484 4 472 3.05e-45 165
Msa1025650 MtrunA17_Chr8g0339451 31.084 415 219 15 99 480 79 459 4.52e-45 164
Msa1025650 MtrunA17_Chr6g0454131 26.810 511 311 17 3 484 2 478 5.10e-45 164
Msa1025650 MtrunA17_Chr6g0459311 29.091 495 290 16 9 480 11 467 6.33e-45 164
Msa1025650 MtrunA17_Chr7g0218811 27.386 482 291 15 11 482 15 447 6.85e-45 163
Msa1025650 MtrunA17_Chr8g0335141 37.589 282 142 7 217 487 213 471 7.69e-45 164
Msa1025650 MtrunA17_Chr4g0053501 28.429 503 302 18 1 484 1 464 1.12e-44 164
Msa1025650 MtrunA17_Chr5g0412101 28.088 502 315 18 1 486 1 472 1.23e-44 163
Msa1025650 MtrunA17_Chr8g0365811 26.148 501 329 16 1 486 485 959 1.55e-44 168
Msa1025650 MtrunA17_Chr8g0365811 26.293 464 276 17 6 439 4 431 2.21e-38 149
Msa1025650 MtrunA17_Chr6g0486251 27.823 496 297 16 8 480 3 460 1.62e-44 162
Msa1025650 MtrunA17_Chr6g0486201 27.823 496 297 16 8 480 3 460 1.62e-44 162
Msa1025650 MtrunA17_Chr8g0382021 26.403 481 305 13 16 481 39 485 1.66e-44 163
Msa1025650 MtrunA17_Chr6g0449931 29.703 505 291 19 9 487 4 470 2.59e-44 162
Msa1025650 MtrunA17_Chr1g0207951 27.010 485 313 14 10 484 655 1108 3.64e-44 167
Msa1025650 MtrunA17_Chr1g0207951 27.347 490 301 19 10 485 123 571 9.11e-43 162
Msa1025650 MtrunA17_Chr3g0122001 28.800 500 297 16 11 484 486 952 3.80e-44 166
Msa1025650 MtrunA17_Chr3g0122001 26.848 514 302 15 11 490 6 479 3.02e-41 158
Msa1025650 MtrunA17_Chr6g0462571 27.767 497 291 14 12 482 5 459 1.07e-43 160
Msa1025650 MtrunA17_Chr8g0336691 28.937 508 290 18 10 488 12 477 1.53e-43 165
Msa1025650 MtrunA17_Chr8g0336691 36.213 301 152 9 197 480 1098 1375 1.37e-41 159
Msa1025650 MtrunA17_Chr8g0336691 31.111 495 268 21 10 488 479 916 1.26e-40 156
Msa1025650 MtrunA17_Chr8g0339601 32.558 344 176 11 150 471 8 317 1.84e-43 156
Msa1025650 MtrunA17_Chr6g0454271 33.557 298 174 8 191 484 9 286 2.13e-43 155
Msa1025650 MtrunA17_Chr7g0243731 85.000 80 12 0 341 420 1 80 2.25e-43 148
Msa1025650 MtrunA17_Chr6g0462521 32.267 375 200 13 122 480 113 449 3.82e-43 159
Msa1025650 MtrunA17_Chr1g0207931 25.657 495 272 14 5 485 86 498 4.54e-43 159
Msa1025650 MtrunA17_Chr1g0207831 25.506 494 318 19 8 485 5 464 6.73e-43 158
Msa1025650 MtrunA17_Chr7g0232341 35.540 287 149 9 217 489 207 471 7.29e-43 158
Msa1025650 MtrunA17_Chr7g0232401 28.257 499 278 22 7 486 32 469 9.81e-43 158
Msa1025650 MtrunA17_Chr7g0232331 28.820 517 275 25 11 487 6 469 1.42e-42 157
Msa1025650 MtrunA17_Chr8g0339461 32.190 379 199 14 122 473 113 460 2.10e-42 157
Msa1025650 MtrunA17_Chr4g0053321 27.789 511 299 18 10 493 25 492 2.44e-42 157
Msa1025650 MtrunA17_Chr3g0112761 26.400 500 290 17 11 487 8 452 2.72e-42 156
Msa1025650 MtrunA17_Chr8g0336651 36.000 300 140 8 204 480 969 1239 3.43e-42 161
Msa1025650 MtrunA17_Chr8g0336651 36.131 274 131 6 217 488 547 778 3.73e-39 152
Msa1025650 MtrunA17_Chr8g0336651 30.851 376 216 11 122 480 112 460 2.45e-38 149
Msa1025650 MtrunA17_Chr6g0454251 27.751 418 242 14 6 388 2 394 4.37e-42 154
Msa1025650 MtrunA17_Chr5g0431441 25.826 484 299 14 11 477 18 458 4.92e-42 156
Msa1025650 MtrunA17_Chr5g0431361 27.163 497 309 17 1 486 1 455 5.63e-42 155
Msa1025650 MtrunA17_Chr5g0403641 26.854 499 281 15 9 480 57 498 5.70e-42 157
Msa1025650 MtrunA17_Chr5g0412131 27.846 492 307 18 11 486 12 471 6.14e-42 155
Msa1025650 MtrunA17_Chr4g0066141 45.665 173 93 1 322 493 188 360 1.38e-41 152
Msa1025650 MtrunA17_Chr4g0066141 36.082 194 108 3 39 232 8 185 2.46e-25 107
Msa1025650 MtrunA17_Chr1g0153461 38.938 226 114 4 274 487 2 215 2.39e-41 147
Msa1025650 MtrunA17_Chr7g0232311 34.218 339 169 13 166 481 153 460 2.63e-41 154
Msa1025650 MtrunA17_Chr8g0339631 29.540 413 239 13 99 487 87 471 3.15e-41 154
Msa1025650 MtrunA17_Chr7g0218791 26.775 493 290 16 11 483 5 446 3.37e-41 153
Msa1025650 MtrunA17_Chr3g0118751 26.044 503 283 13 9 484 4 444 4.65e-41 153
Msa1025650 MtrunA17_Chr5g0412111 27.745 501 295 21 11 486 5 463 5.10e-41 153
Msa1025650 MtrunA17_Chr8g0377941 27.455 499 303 16 6 484 2 461 6.42e-41 153
Msa1025650 MtrunA17_Chr8g0339441 40.183 219 104 4 276 479 218 424 1.32e-40 151
Msa1025650 MtrunA17_Chr8g0336251 27.669 459 305 12 6 458 2 439 1.89e-40 151
Msa1025650 MtrunA17_Chr8g0336321 27.669 459 305 12 6 458 2 439 1.97e-40 151
Msa1025650 MtrunA17_Chr5g0442511 30.946 349 193 10 167 485 164 494 2.20e-40 152
Msa1025650 MtrunA17_Chr3g0118721 35.165 273 157 7 214 484 35 289 2.54e-40 147
Msa1025650 MtrunA17_Chr5g0431421 26.611 481 308 14 11 486 10 450 2.65e-40 150
Msa1025650 MtrunA17_Chr5g0431371 26.875 480 308 13 11 486 10 450 3.62e-40 150
Msa1025650 MtrunA17_Chr3g0106231 26.360 478 290 16 11 477 18 444 4.57e-40 150
Msa1025650 MtrunA17_Chr6g0462541 27.016 496 298 14 12 482 5 461 4.87e-40 150
Msa1025650 MtrunA17_Chr8g0373301 33.987 306 160 9 197 486 189 468 8.29e-40 150
Msa1025650 MtrunA17_Chr1g0153451 35.612 278 140 8 217 480 207 459 1.08e-39 149
Msa1025650 MtrunA17_Chr8g0336731 31.300 377 215 12 122 481 138 487 1.25e-39 150
Msa1025650 MtrunA17_Chr8g0336741 27.921 505 283 19 9 480 11 467 1.30e-39 149
Msa1025650 MtrunA17_Chr8g0334851 33.228 316 159 9 197 489 188 474 2.83e-39 148
Msa1025650 MtrunA17_Chr6g0454221 35.772 246 131 6 243 483 6 229 3.07e-39 144
Msa1025650 MtrunA17_Chr2g0278741 28.571 483 277 19 1 460 87 524 7.67e-39 148
Msa1025650 MtrunA17_Chr2g0278721 29.536 474 278 19 4 460 8 442 1.23e-38 150
Msa1025650 MtrunA17_Chr2g0278721 23.899 477 308 16 5 460 511 953 2.20e-28 119
Msa1025650 MtrunA17_Chr2g0302961 26.200 500 310 17 8 484 2 465 1.55e-38 146
Msa1025650 MtrunA17_Chr5g0431401 25.625 480 314 13 11 486 10 450 2.50e-38 145
Msa1025650 MtrunA17_Chr2g0302991 26.423 492 316 14 8 484 2 462 3.22e-38 145
Msa1025650 MtrunA17_Chr8g0334861 30.100 402 208 17 126 483 90 462 7.24e-38 144
Msa1025650 MtrunA17_Chr4g0069611 26.580 459 294 13 10 460 14 437 1.18e-37 144
Msa1025650 MtrunA17_Chr7g0241781 26.201 458 273 13 9 460 7 405 3.76e-37 142
Msa1025650 MtrunA17_Chr5g0429681 26.347 501 313 18 1 482 34 497 4.56e-37 142
Msa1025650 MtrunA17_Chr7g0241801 26.600 500 260 16 9 496 7 411 6.38e-37 141
Msa1025650 MtrunA17_Chr5g0429711 25.104 482 320 18 12 484 12 461 3.23e-36 139
Msa1025650 MtrunA17_Chr5g0401721 26.441 503 305 19 9 484 6 470 3.98e-36 139
Msa1025650 MtrunA17_Chr5g0432731 28.793 323 195 8 171 487 6 299 2.72e-35 133
Msa1025650 MtrunA17_Chr4g0032331 27.311 476 279 19 1 459 1 426 3.73e-35 136
Msa1025650 MtrunA17_Chr3g0079711 40.722 194 90 5 302 481 3 185 3.78e-35 130
Msa1025650 MtrunA17_Chr5g0426401 36.187 257 140 8 210 463 53 288 4.05e-35 133
Msa1025650 MtrunA17_Chr5g0393591 22.736 497 285 14 11 485 17 436 8.06e-35 135
Msa1025650 MtrunA17_Chr5g0448551 27.455 448 273 15 12 443 8 419 8.59e-34 132
Msa1025650 MtrunA17_Chr7g0249961 30.833 240 148 5 245 484 38 259 1.24e-33 128
Msa1025650 MtrunA17_Chr5g0409591 22.568 514 316 13 12 479 5 482 2.10e-33 132
Msa1025650 MtrunA17_Chr3g0106251 33.080 263 143 8 219 477 53 286 2.57e-33 128
Msa1025650 MtrunA17_Chr4g0072771 27.309 498 289 19 9 486 23 467 2.59e-33 131
Msa1025650 MtrunA17_Chr6g0454171 30.466 279 155 8 210 484 66 309 1.63e-32 126
Msa1025650 MtrunA17_Chr8g0355011 26.133 375 205 7 121 484 48 361 2.69e-32 127
Msa1025650 MtrunA17_Chr1g0196851 25.895 475 271 15 8 453 46 468 2.79e-32 129
Msa1025650 MtrunA17_Chr4g0042931 26.347 501 312 19 6 486 2 465 5.35e-32 128
Msa1025650 MtrunA17_Chr4g0072761 25.703 498 291 19 7 481 11 452 1.05e-31 127
Msa1025650 MtrunA17_Chr6g0454371 36.612 183 99 4 302 484 5 170 2.88e-31 119
Msa1025650 MtrunA17_Chr4g0029131 25.056 447 287 12 7 443 8 416 6.55e-31 126
Msa1025650 MtrunA17_Chr4g0029131 24.227 194 131 6 7 198 466 645 1.03e-11 67.4
Msa1025650 MtrunA17_Chr2g0302851 27.447 470 276 16 10 460 15 438 1.02e-30 124
Msa1025650 MtrunA17_Chr6g0464091 26.907 472 283 17 10 460 17 447 1.15e-30 124
Msa1025650 MtrunA17_Chr4g0042891 25.825 515 299 19 6 486 2 467 1.88e-30 123
Msa1025650 MtrunA17_Chr7g0232351 29.167 408 226 17 10 388 5 378 3.59e-30 121
Msa1025650 MtrunA17_Chr6g0466831 26.059 472 280 18 10 460 17 440 4.48e-30 122
Msa1025650 MtrunA17_Chr6g0482061 24.803 508 303 19 1 471 1 466 1.97e-29 120
Msa1025650 MtrunA17_Chr6g0466841 25.847 472 281 19 10 460 17 440 2.14e-29 120
Msa1025650 MtrunA17_Chr4g0029151 24.838 463 290 14 7 453 16 436 2.17e-28 117
Msa1025650 MtrunA17_Chr4g0039881 26.049 453 280 15 21 459 2 413 5.79e-28 115
Msa1025650 MtrunA17_Chr8g0367221 25.690 471 293 16 10 450 11 454 1.05e-26 114
Msa1025650 MtrunA17_Chr8g0367221 25.532 470 297 17 10 461 797 1231 4.60e-25 109
Msa1025650 MtrunA17_Chr8g0367221 24.411 467 305 14 10 450 1287 1731 1.04e-23 105
Msa1025650 MtrunA17_Chr4g0040691 24.313 473 297 14 6 459 3 433 1.25e-26 112
Msa1025650 MtrunA17_Chr5g0427571 28.030 264 176 5 196 458 23 273 4.02e-26 108
Msa1025650 MtrunA17_Chr4g0040711 25.107 466 302 15 6 459 3 433 7.21e-26 110
Msa1025650 MtrunA17_Chr8g0337381 41.429 140 68 3 349 487 2 128 1.84e-25 101
Msa1025650 MtrunA17_Chr3g0092031 34.759 187 100 6 278 460 6 174 7.87e-25 102
Msa1025650 MtrunA17_Chr8g0336261 37.584 149 77 4 302 450 5 137 2.69e-24 98.2
Msa1025650 MtrunA17_Chr6g0454231 29.478 268 125 10 221 484 11 218 9.20e-24 103
Msa1025650 MtrunA17_Chr7g0250021 25.959 339 202 10 6 326 7 314 1.16e-23 101
Msa1025650 MtrunA17_Chr2g0319801 25.000 476 292 16 5 459 2 433 2.36e-23 102
Msa1025650 MtrunA17_Chr2g0319731 23.849 478 303 14 1 459 15 450 3.52e-23 102
Msa1025650 MtrunA17_Chr2g0319761 24.684 474 303 16 10 469 7 440 5.72e-21 95.5
Msa1025650 MtrunA17_Chr2g0283041 24.194 496 313 20 8 484 4 455 9.47e-21 94.7
Msa1025650 MtrunA17_Chr1g0207881 31.579 133 83 2 353 485 261 385 1.08e-20 94.0
Msa1025650 MtrunA17_Chr5g0431431 31.053 190 107 5 219 406 157 324 1.19e-19 90.5
Msa1025650 MtrunA17_Chr2g0319751 22.944 462 309 11 10 459 484 910 3.99e-19 90.9
Msa1025650 MtrunA17_Chr2g0319751 21.598 463 294 13 8 459 5 409 7.84e-18 87.0
Msa1025650 MtrunA17_Chr4g0029161 23.266 447 267 15 7 443 8 388 4.03e-19 89.7
Msa1025650 MtrunA17_Chr2g0319791 21.861 462 314 12 10 459 7 433 9.53e-19 89.0
Msa1025650 MtrunA17_Chr6g0453981 28.205 234 143 7 130 347 3 227 6.36e-15 74.3
Msa1025650 MtrunA17_Chr6g0477011 26.433 314 196 11 10 313 15 303 3.48e-14 73.6
Msa1025650 MtrunA17_Chr7g0272701 31.967 122 80 2 105 223 30 151 3.91e-14 70.1
Msa1025650 MtrunA17_Chr4g0066231 41.558 77 45 0 387 463 1 77 1.54e-13 65.9
Msa1025650 MtrunA17_Chr2g0321331 31.313 198 102 7 264 459 77 242 1.22e-12 68.2
Msa1025650 MtrunA17_Chr5g0426411 27.848 158 96 5 5 153 6 154 9.00e-12 63.9
Msa1025650 MtrunA17_Chr6g0454391 34.884 86 43 1 360 445 8 80 2.27e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1025650 AT4G34131.1 42.596 493 261 10 3 486 2 481 2.67e-133 395
Msa1025650 AT2G15490.3 40.121 496 268 10 6 488 2 481 7.83e-126 375
Msa1025650 AT4G34135.1 41.414 495 269 10 1 486 1 483 1.09e-125 375
Msa1025650 AT2G15480.1 38.878 499 276 10 3 488 2 484 1.44e-124 372
Msa1025650 AT2G15480.2 38.189 508 277 10 3 488 2 494 1.64e-124 373
Msa1025650 AT2G15490.1 40.000 500 266 11 6 488 2 484 6.19e-124 371
Msa1025650 AT2G36770.1 39.315 496 290 7 2 491 5 495 8.84e-120 360
Msa1025650 AT2G36780.1 40.080 499 282 9 2 491 5 495 1.39e-119 360
Msa1025650 AT2G36800.1 40.244 492 268 9 10 487 11 490 1.36e-117 355
Msa1025650 AT2G36790.1 40.041 487 281 7 10 490 12 493 1.67e-113 345
Msa1025650 AT2G36760.1 38.600 500 290 9 2 492 5 496 1.76e-113 344
Msa1025650 AT2G36750.1 38.306 496 278 11 10 491 9 490 1.12e-111 340
Msa1025650 AT4G34138.1 38.788 495 275 12 8 491 8 485 4.47e-111 338
Msa1025650 AT3G53160.1 39.877 489 275 11 6 484 3 482 3.20e-108 331
Msa1025650 AT3G53150.1 36.328 512 286 12 1 484 10 509 1.53e-99 309
Msa1025650 AT4G34135.2 38.369 331 192 5 1 323 1 327 1.13e-77 247
Msa1025650 AT2G16890.2 33.929 504 280 17 11 495 9 478 1.22e-67 225
Msa1025650 AT5G14860.1 33.399 506 284 19 1 484 1 475 1.87e-65 219
Msa1025650 AT1G22400.1 30.857 525 292 18 1 491 1 488 9.70e-63 213
Msa1025650 AT2G16890.3 34.325 437 242 14 11 429 9 418 7.55e-62 208
Msa1025650 AT1G22380.1 30.977 481 286 16 6 465 8 463 8.89e-62 210
Msa1025650 AT1G10400.1 32.724 492 281 18 9 484 5 462 1.94e-58 200
Msa1025650 AT1G22360.1 29.719 498 300 14 9 484 8 477 2.85e-58 200
Msa1025650 AT1G73880.1 30.118 508 298 17 2 491 5 473 1.74e-56 195
Msa1025650 AT1G22360.2 29.832 476 297 12 9 461 8 469 5.05e-56 194
Msa1025650 AT1G22340.1 28.994 507 311 16 1 484 1 481 4.10e-55 192
Msa1025650 AT1G22370.2 30.858 431 258 15 6 415 8 419 5.04e-55 192
Msa1025650 AT5G03490.1 29.774 487 292 16 11 487 19 465 1.10e-54 190
Msa1025650 AT1G78270.1 29.191 507 297 16 6 484 8 480 2.33e-53 187
Msa1025650 AT1G01420.2 31.755 507 271 19 1 477 1 462 6.91e-53 186
Msa1025650 AT1G01420.1 32.000 500 265 19 8 477 5 459 2.78e-52 184
Msa1025650 AT5G12890.1 27.879 495 313 14 10 483 9 480 7.92e-52 183
Msa1025650 AT4G01070.1 30.616 503 287 18 11 489 8 472 2.21e-51 182
Msa1025650 AT3G21760.1 29.615 520 281 20 9 484 2 480 5.84e-51 181
Msa1025650 AT4G15480.1 27.435 503 313 17 1 484 9 478 2.60e-50 179
Msa1025650 AT1G51210.1 30.064 469 272 18 2 460 11 433 2.90e-50 177
Msa1025650 AT3G02100.1 28.854 506 289 18 3 486 5 461 6.55e-50 177
Msa1025650 AT3G50740.1 29.400 517 284 23 8 487 4 476 1.30e-49 177
Msa1025650 AT5G26310.1 30.250 519 267 22 8 485 4 468 9.39e-49 175
Msa1025650 AT2G36970.1 26.590 519 311 17 1 491 1 477 1.02e-48 175
Msa1025650 AT2G28080.1 27.557 479 313 12 15 486 22 473 1.02e-48 175
Msa1025650 AT1G05675.1 27.743 483 298 14 11 481 6 449 2.60e-48 173
Msa1025650 AT3G11340.1 27.565 497 300 15 1 487 1 447 2.88e-48 172
Msa1025650 AT2G29730.1 28.024 496 307 17 10 488 4 466 5.66e-48 172
Msa1025650 AT2G43820.1 28.834 489 296 16 7 486 3 448 3.17e-47 170
Msa1025650 AT2G31790.1 26.556 482 311 14 9 481 6 453 7.38e-47 169
Msa1025650 AT4G15490.1 26.441 503 297 18 11 484 8 466 8.68e-47 169
Msa1025650 AT4G15260.1 32.710 321 181 7 172 484 61 354 9.14e-47 166
Msa1025650 AT2G31750.1 27.495 491 299 17 9 484 6 454 1.17e-46 169
Msa1025650 AT2G29740.1 28.180 511 303 17 1 484 1 474 1.20e-46 169
Msa1025650 AT1G07260.1 28.600 500 297 15 11 484 6 471 2.03e-46 168
Msa1025650 AT2G31750.2 27.495 491 299 17 9 484 6 454 3.31e-46 168
Msa1025650 AT5G05870.1 26.626 492 310 13 5 484 2 454 5.93e-46 167
Msa1025650 AT3G21800.1 27.308 509 303 15 8 484 2 475 7.35e-46 167
Msa1025650 AT3G16520.3 29.679 374 216 12 122 481 116 456 1.00e-45 166
Msa1025650 AT1G24100.1 29.243 489 294 17 9 484 9 458 4.05e-45 164
Msa1025650 AT4G15500.1 26.295 502 302 17 11 488 9 466 5.61e-45 164
Msa1025650 AT4G36770.1 29.388 490 272 19 9 470 2 445 6.11e-45 164
Msa1025650 AT3G21790.1 26.316 532 281 16 9 484 2 478 6.50e-45 165
Msa1025650 AT1G05680.1 27.778 486 294 16 11 481 6 449 7.46e-45 164
Msa1025650 AT5G66690.1 28.627 517 278 21 8 485 4 468 1.03e-44 164
Msa1025650 AT4G15280.2 26.960 523 300 17 1 484 26 505 2.22e-44 163
Msa1025650 AT2G18570.1 27.470 506 287 24 8 479 2 461 8.42e-44 161
Msa1025650 AT5G05860.1 25.407 492 296 14 4 477 2 440 8.42e-44 160
Msa1025650 AT4G15280.1 27.184 515 293 17 9 484 2 473 8.93e-44 161
Msa1025650 AT1G06000.1 29.400 500 267 19 3 484 2 433 1.19e-43 160
Msa1025650 AT3G16520.2 31.077 325 187 11 122 432 116 417 1.62e-43 160
Msa1025650 AT2G43840.1 26.392 485 303 16 11 485 7 447 1.68e-43 160
Msa1025650 AT3G16520.1 31.077 325 187 11 122 432 116 417 2.14e-43 159
Msa1025650 AT2G43840.2 26.186 485 304 16 11 485 7 447 3.29e-43 159
Msa1025650 AT1G01390.1 30.677 502 278 19 8 481 5 464 8.97e-43 158
Msa1025650 AT1G01390.2 31.174 494 270 19 8 473 22 473 1.00e-42 159
Msa1025650 AT4G14090.1 27.846 492 296 17 6 483 8 454 1.10e-42 158
Msa1025650 AT3G46680.1 28.144 501 283 19 4 482 2 447 2.62e-42 156
Msa1025650 AT1G07240.1 25.780 481 316 12 12 473 6 464 3.53e-42 157
Msa1025650 AT5G59590.1 25.403 496 311 16 1 484 1 449 3.89e-42 156
Msa1025650 AT3G46650.1 28.690 481 268 17 9 477 8 425 6.82e-42 155
Msa1025650 AT3G46660.1 27.033 492 295 17 12 487 15 458 8.28e-42 155
Msa1025650 AT3G46670.1 26.955 486 303 15 11 487 9 451 8.60e-42 155
Msa1025650 AT3G21560.1 25.600 500 307 19 11 484 12 472 1.63e-41 155
Msa1025650 AT4G15550.1 27.435 503 292 16 11 483 13 472 1.93e-41 155
Msa1025650 AT3G21750.1 28.101 516 282 18 9 484 2 468 1.13e-40 152
Msa1025650 AT1G07250.1 27.912 498 302 18 12 484 7 472 1.38e-40 152
Msa1025650 AT3G21780.1 26.575 508 300 16 9 484 2 468 2.76e-40 152
Msa1025650 AT5G05880.1 26.104 498 305 13 5 487 2 451 3.14e-40 151
Msa1025650 AT5G38010.1 26.408 515 286 17 1 484 1 453 6.36e-40 150
Msa1025650 AT5G05900.1 26.243 503 281 17 8 482 5 445 1.84e-39 149
Msa1025650 AT2G30150.2 26.400 500 288 17 11 487 13 455 1.90e-39 149
Msa1025650 AT5G59580.1 26.626 492 300 17 9 487 7 450 3.29e-39 148
Msa1025650 AT2G29750.1 27.866 506 293 21 11 484 8 473 9.35e-39 147
Msa1025650 AT2G29710.1 25.407 492 313 16 12 484 6 462 1.23e-38 147
Msa1025650 AT2G23260.1 27.122 483 304 17 11 484 10 453 1.66e-38 146
Msa1025650 AT2G30140.2 26.166 493 284 17 11 481 13 447 2.63e-38 145
Msa1025650 AT1G05530.1 26.411 496 297 16 11 484 5 454 3.13e-38 145
Msa1025650 AT2G30140.1 26.113 494 284 17 11 481 13 448 3.86e-38 145
Msa1025650 AT3G46700.1 26.369 493 295 17 9 486 7 446 5.81e-38 144
Msa1025650 AT2G23250.1 28.270 474 284 18 21 484 8 435 7.46e-38 144
Msa1025650 AT1G22370.1 34.742 213 134 4 204 415 41 249 8.24e-38 141
Msa1025650 AT2G30150.1 26.008 496 287 17 15 487 1 439 1.05e-37 144
Msa1025650 AT2G18560.1 34.247 219 124 5 271 479 163 371 1.06e-37 142
Msa1025650 AT3G55700.1 24.593 492 310 13 11 487 8 453 4.40e-36 139
Msa1025650 AT5G05890.1 24.752 505 307 14 5 487 2 455 6.76e-36 139
Msa1025650 AT1G30530.1 25.255 491 298 14 11 484 12 450 1.05e-35 138
Msa1025650 AT3G46720.1 27.038 503 285 17 4 486 2 442 1.56e-35 138
Msa1025650 AT5G49690.1 25.000 500 305 15 10 492 9 455 4.30e-35 137
Msa1025650 AT5G17030.1 25.403 496 296 19 11 484 12 455 5.37e-35 136
Msa1025650 AT3G46690.1 25.558 493 304 15 9 486 7 451 7.26e-35 136
Msa1025650 AT1G05560.1 26.559 497 292 18 11 484 5 451 9.34e-35 136
Msa1025650 AT1G05560.2 26.559 497 292 18 11 484 55 501 1.17e-34 136
Msa1025650 AT2G15490.2 32.161 199 119 3 6 192 2 196 3.40e-34 130
Msa1025650 AT2G15490.2 28.431 204 114 9 306 488 78 270 1.12e-11 65.9
Msa1025650 AT5G17050.1 23.838 495 306 14 11 484 12 456 7.84e-33 130
Msa1025650 AT5G38040.1 25.314 478 295 15 21 484 20 449 1.43e-32 129
Msa1025650 AT3G55710.1 25.709 494 310 13 12 490 9 460 1.84e-32 129
Msa1025650 AT5G65550.1 26.471 476 294 17 9 461 7 449 4.02e-32 128
Msa1025650 AT2G26480.1 26.653 499 274 16 11 481 8 442 5.73e-32 128
Msa1025650 AT5G17040.1 23.810 483 311 13 11 484 5 439 1.96e-30 123
Msa1025650 AT3G22250.1 23.695 498 274 20 9 463 6 440 6.34e-29 119
Msa1025650 AT5G17040.2 29.545 264 157 6 221 484 103 337 1.38e-28 116
Msa1025650 AT2G16890.4 31.464 321 181 12 11 313 9 308 7.02e-28 114
Msa1025650 AT2G16890.1 31.464 321 181 12 11 313 9 308 7.02e-28 114
Msa1025650 AT4G27570.1 25.000 460 271 15 9 448 5 410 6.02e-27 113
Msa1025650 AT4G27560.1 24.289 457 278 13 9 448 5 410 2.12e-26 112
Msa1025650 AT5G53990.1 25.265 471 263 17 10 455 5 411 1.49e-24 106
Msa1025650 AT3G29630.2 25.153 489 291 15 8 491 3 421 4.34e-23 102
Msa1025650 AT3G29630.1 25.198 504 298 17 8 491 3 447 1.48e-22 100
Msa1025650 AT1G64910.1 23.753 421 267 12 10 418 5 383 1.63e-22 100
Msa1025650 AT2G22590.1 24.731 465 306 17 8 459 12 445 1.86e-22 100
Msa1025650 AT1G64920.1 23.214 504 301 17 8 487 3 444 3.82e-21 96.3
Msa1025650 AT2G22930.1 22.840 486 313 17 10 485 5 438 4.60e-21 96.3
Msa1025650 AT1G50580.1 23.427 461 295 18 8 458 3 415 1.11e-20 95.1
Msa1025650 AT5G37950.1 25.000 276 182 7 121 388 85 343 6.27e-20 91.7
Msa1025650 AT5G37950.2 25.092 271 182 7 121 388 85 337 8.33e-20 91.3
Msa1025650 AT5G54010.1 24.468 470 288 16 8 465 3 417 8.38e-20 92.4
Msa1025650 AT4G09500.1 23.128 454 280 14 9 459 4 391 1.38e-18 88.2
Msa1025650 AT5G54060.1 21.486 498 326 15 8 481 10 466 3.74e-18 87.4
Msa1025650 AT4G01070.2 27.160 324 198 13 11 322 8 305 1.81e-17 84.3
Msa1025650 AT4G09500.2 22.440 459 302 14 9 459 4 416 1.89e-17 85.1

Find 107 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTCATTTCTTTGCTCTCT+TGG 0.225932 7_1:-56421025 None:intergenic
AACATACAGAATTGCTAAAT+TGG 0.260917 7_1:+56420499 Msa1025650:CDS
TTTCTCCATGTGTCCCCTAT+TGG 0.263912 7_1:-56420466 None:intergenic
TAAACTGATGTCACTATCTA+TGG 0.286402 7_1:-56419851 None:intergenic
TTCATACATCGGTTCAAAAT+AGG 0.310140 7_1:-56420295 None:intergenic
GGCACCACAGCTTCTGATAT+TGG 0.312472 7_1:+56420746 Msa1025650:CDS
CTGAAGACGGGTCATCTTAA+TGG 0.314786 7_1:-56420235 None:intergenic
TGCTTTCTCACCAAGTGCTT+TGG 0.319430 7_1:-56421156 None:intergenic
GCACATGGGCTTGAAAATTC+AGG 0.326438 7_1:+56420606 Msa1025650:CDS
GGAGCAAAAGAAAACAAGTT+TGG 0.332603 7_1:+56420927 Msa1025650:CDS
GTCACAAACCCTCCGGTTGC+AGG 0.349694 7_1:-56420774 None:intergenic
ATAGATAGTGACATCAGTTT+AGG 0.364268 7_1:+56419853 Msa1025650:CDS
GTAAAGTCACTCGTGGAGTA+TGG 0.364741 7_1:+56419977 Msa1025650:CDS
AAAGGATTAAAGAAAGCAAC+AGG 0.387076 7_1:+56420703 Msa1025650:CDS
AGCCTTGCTGTGTCAATCAT+AGG 0.391239 7_1:-56419760 None:intergenic
CCCTGACGGTGTTGAAAACT+TGG 0.391993 7_1:+56419927 Msa1025650:CDS
CCGTCTTCAGCTTCGTGATT+GGG 0.393512 7_1:+56420248 Msa1025650:CDS
CCCGTCTTCAGCTTCGTGAT+TGG 0.398367 7_1:+56420247 Msa1025650:CDS
ATATGGCCAGCAGTTGGATA+TGG 0.401049 7_1:-56419733 None:intergenic
CTACACATGCCAATGCTTCA+AGG 0.403905 7_1:+56419818 Msa1025650:CDS
TGAAGAGGAAATGGTGAAAA+GGG 0.409107 7_1:+56420962 Msa1025650:CDS
GAGCAAAAGAAAACAAGTTT+GGG 0.416383 7_1:+56420928 Msa1025650:CDS
ACCTTCCTCTATAGTCCTCT+TGG 0.417533 7_1:-56421075 None:intergenic
TGATGAAAGAAAGGCCAATA+GGG 0.419275 7_1:+56420452 Msa1025650:CDS
TTGTTAGCCCAAGCTGAAAC+TGG 0.419730 7_1:-56420426 None:intergenic
TAACATTAGTGAAGAGGAAA+TGG 0.423172 7_1:+56420953 Msa1025650:CDS
GACAAAATAATTTGCACAAT+AGG 0.423388 7_1:-56420142 None:intergenic
TCTGTATTGTATGTATGTTT+TGG 0.424286 7_1:+56420543 Msa1025650:CDS
GCAACAGGGGATATATCATA+TGG 0.427972 7_1:+56420718 Msa1025650:CDS
AACATTGGCCACGTGATCAT+TGG 0.436251 7_1:-56420843 None:intergenic
ATGATGAAAGAAAGGCCAAT+AGG 0.443988 7_1:+56420451 Msa1025650:CDS
ATATTGGACCACCCTGCAAC+CGG 0.452801 7_1:+56420762 Msa1025650:CDS
TGTCAATCATAGGGTTCATA+TGG 0.461840 7_1:-56419750 None:intergenic
GTGAAGAGGAAATGGTGAAA+AGG 0.466042 7_1:+56420961 Msa1025650:CDS
GCGATGTAAAAGTGAATCCT+TGG 0.470034 7_1:-56420108 None:intergenic
TTTCTTCCATATCCAACTGC+TGG 0.471587 7_1:+56419727 Msa1025650:CDS
CAGTTCCATTCAGCTCAAGT+TGG 0.476761 7_1:+56419901 Msa1025650:CDS
GTTCTTGAAAGTGTAAATGC+TGG 0.477059 7_1:+56420816 Msa1025650:CDS
TGTCGGACCAGTTTCAGCTT+GGG 0.478674 7_1:+56420419 Msa1025650:CDS
TTCAGCTTCGTGATTGGGAA+AGG 0.480739 7_1:+56420253 Msa1025650:CDS
ACCAAGCATTTCACTTGAAG+TGG 0.483413 7_1:-56419956 None:intergenic
GTGTCGGACCAGTTTCAGCT+TGG 0.502476 7_1:+56420418 Msa1025650:CDS
GAATCAGCGGAAAGAAGCTA+TGG 0.503791 7_1:+56420315 Msa1025650:CDS
TAATTTAGTTTCTGATACAC+AGG 0.508818 7_1:+56420185 Msa1025650:CDS
GGACACATGGAGAAAAGCTT+AGG 0.509633 7_1:+56420474 Msa1025650:CDS
GGGGATATATCATATGGGAC+TGG 0.510241 7_1:+56420724 Msa1025650:CDS
GGAGACCAACTTGAGCTGAA+TGG 0.510655 7_1:-56419906 None:intergenic
CTACAATCGGAATCAAATCA+TGG 0.511363 7_1:+56420394 Msa1025650:CDS
ATTTGCACAATAGGAGAAGT+AGG 0.512936 7_1:-56420133 None:intergenic
TCACTGATATGATGTATCCT+TGG 0.515837 7_1:+56420055 Msa1025650:CDS
TAACAAGGATGATGAAAGAA+AGG 0.517122 7_1:+56420443 Msa1025650:CDS
CTTTCCGCTGATTCATACAT+CGG 0.519278 7_1:-56420306 None:intergenic
GGTTTGTGACTCATTGTGGT+TGG 0.521028 7_1:+56420787 Msa1025650:CDS
GCAGCTGATTCTACAGTCCA+AGG 0.523176 7_1:-56420072 None:intergenic
AGTTTCAGCTTGGGCTAACA+AGG 0.523722 7_1:+56420428 Msa1025650:CDS
AGGATGAGAGCAAAGAAACT+TGG 0.527542 7_1:+56421044 Msa1025650:CDS
ATATCAGTGACTATACAATC+TGG 0.530132 7_1:-56420042 None:intergenic
TCAGCTTCGTGATTGGGAAA+GGG 0.538404 7_1:+56420254 Msa1025650:CDS
TAAAATTGCTCAGCAAACAT+TGG 0.543942 7_1:-56420858 None:intergenic
AAAGATGATGAAGATGATGA+TGG 0.546515 7_1:+56420654 Msa1025650:CDS
CTGCAAAACTAAACATTCCA+AGG 0.548184 7_1:+56420091 Msa1025650:CDS
CCAATCACGAAGCTGAAGAC+GGG 0.553660 7_1:-56420247 None:intergenic
CAGCTTGTAGAAATTGCACA+TGG 0.554057 7_1:+56420591 Msa1025650:CDS
GCCTTGCTGTGTCAATCATA+GGG 0.555144 7_1:-56419759 None:intergenic
TCACAAACCCTCCGGTTGCA+GGG 0.557487 7_1:-56420773 None:intergenic
CCCAATCACGAAGCTGAAGA+CGG 0.560852 7_1:-56420248 None:intergenic
ACCAAGAGAGCAAAGAAATG+AGG 0.564369 7_1:+56421024 Msa1025650:CDS
ACAGAACTTCAATAGAATCT+CGG 0.565916 7_1:-56420005 None:intergenic
TTGAAGATTGGTGTCCCCGT+AGG 0.567005 7_1:+56420906 Msa1025650:CDS
TGGGACTAACATTAGTGAAG+AGG 0.570468 7_1:+56420947 Msa1025650:CDS
CGGGTCATCTTAATGGTATG+AGG 0.577656 7_1:-56420228 None:intergenic
TTGAAGAAATCCAAAGCACT+TGG 0.578175 7_1:+56421146 Msa1025650:CDS
GCTCAAGTTGGTCTCCCTGA+CGG 0.579509 7_1:+56419913 Msa1025650:CDS
GAGCATGAGGAAGCCTAGCA+AGG 0.580521 7_1:-56420569 None:intergenic
ATTGGCATGTGTAGATATGA+TGG 0.590368 7_1:-56419809 None:intergenic
CAACAGGGGATATATCATAT+GGG 0.590826 7_1:+56420719 Msa1025650:CDS
GCAAGGCTATTTGCAAAGCA+TGG 0.592980 7_1:+56419775 Msa1025650:CDS
AAAGGCCAATAGGGGACACA+TGG 0.599510 7_1:+56420461 Msa1025650:CDS
TGAACCGATGTATGAATCAG+CGG 0.600060 7_1:+56420302 Msa1025650:CDS
AAGGGAAAACAATGCTAGCA+CGG 0.609332 7_1:+56420272 Msa1025650:CDS
GGGTTCATATGGCCAGCAGT+TGG 0.610728 7_1:-56419739 None:intergenic
TGCTGCCAAGAGGACTATAG+AGG 0.613396 7_1:+56421070 Msa1025650:CDS
ATTTCTACAAGCTGAGCATG+AGG 0.614575 7_1:-56420582 None:intergenic
GGAGGGTTTGTGACTCATTG+TGG 0.616914 7_1:+56420783 Msa1025650:CDS
ACCCTATGATTGACACAGCA+AGG 0.618859 7_1:+56419758 Msa1025650:CDS
ACAATGAGTCACAAACCCTC+CGG 0.620558 7_1:-56420781 None:intergenic
GGAATCAAATCATGGAGTGT+CGG 0.622138 7_1:+56420402 Msa1025650:CDS
GCCACTTCAAGTGAAATGCT+TGG 0.626503 7_1:+56419955 Msa1025650:CDS
TTGGACCACCCTGCAACCGG+AGG 0.626843 7_1:+56420765 Msa1025650:CDS
TGGTCCAATATCAGAAGCTG+TGG 0.627761 7_1:-56420750 None:intergenic
GGGATATATCATATGGGACT+GGG 0.631311 7_1:+56420725 Msa1025650:CDS
GCCAAGAGGACTATAGAGGA+AGG 0.631460 7_1:+56421074 Msa1025650:CDS
TGGACCACCCTGCAACCGGA+GGG 0.632525 7_1:+56420766 Msa1025650:CDS
GATGAAAGAAAGGCCAATAG+GGG 0.637565 7_1:+56420453 Msa1025650:CDS
AATCAGCGGAAAGAAGCTAT+GGG 0.641612 7_1:+56420316 Msa1025650:CDS
TCAGAAACTAAATTATCATG+AGG 0.644747 7_1:-56420177 None:intergenic
AAGAGGACTATAGAGGAAGG+TGG 0.653780 7_1:+56421077 Msa1025650:CDS
GATGAAGATGATGATGGAGA+AGG 0.655584 7_1:+56420660 Msa1025650:CDS
ATGCTTGGTAAAGTCACTCG+TGG 0.658445 7_1:+56419970 Msa1025650:CDS
AGGATTAAAGAAAGCAACAG+GGG 0.666104 7_1:+56420705 Msa1025650:CDS
AACTTGGTGATGCTGCCAAG+AGG 0.668809 7_1:+56421060 Msa1025650:CDS
AGCTTGTAGAAATTGCACAT+GGG 0.669891 7_1:+56420592 Msa1025650:CDS
TTAATGGTATGAGGTAAACA+AGG 0.670346 7_1:-56420219 None:intergenic
CTGGTTTGCCAATGATCACG+TGG 0.682161 7_1:+56420835 Msa1025650:CDS
AAGGATTAAAGAAAGCAACA+GGG 0.698159 7_1:+56420704 Msa1025650:CDS
CAAACCCTCCGGTTGCAGGG+TGG 0.715047 7_1:-56420770 None:intergenic
GAAAAGGGAAGAGATAGCTG+AGG 0.719754 7_1:+56420977 Msa1025650:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAACTTTTTAAAACTACAAT+CGG + chr7_1:56420381-56420400 Msa1025650:CDS 15.0%
!!! AAACTTTTTAAAACTACAAT+CGG + chr7_1:56420381-56420400 Msa1025650:CDS 15.0%
!!! AACTACATGAATTTTGTTAT+GGG - chr7_1:56419707-56419726 None:intergenic 20.0%
!!! AAACTACATGAATTTTGTTA+TGG - chr7_1:56419708-56419727 None:intergenic 20.0%
!!! AACTACATGAATTTTGTTAT+GGG - chr7_1:56419707-56419726 None:intergenic 20.0%
!!! AAACTACATGAATTTTGTTA+TGG - chr7_1:56419708-56419727 None:intergenic 20.0%
!! CTGAAGAAGTTGAATTTTAA+TGG - chr7_1:56419884-56419903 None:intergenic 25.0%
!! GACAAAATAATTTGCACAAT+AGG - chr7_1:56420145-56420164 None:intergenic 25.0%
!!! ATTGTGCAAATTATTTTGTC+AGG + chr7_1:56420145-56420164 Msa1025650:CDS 25.0%
! TCAGAAACTAAATTATCATG+AGG - chr7_1:56420180-56420199 None:intergenic 25.0%
!! TAATTTAGTTTCTGATACAC+AGG + chr7_1:56420185-56420204 Msa1025650:CDS 25.0%
! AACATACAGAATTGCTAAAT+TGG + chr7_1:56420499-56420518 Msa1025650:CDS 25.0%
!! TCTGTATTGTATGTATGTTT+TGG + chr7_1:56420543-56420562 Msa1025650:CDS 25.0%
!! ATTCAGGTCATAATTTTATC+TGG + chr7_1:56420622-56420641 Msa1025650:CDS 25.0%
!! CTGAAGAAGTTGAATTTTAA+TGG - chr7_1:56419884-56419903 None:intergenic 25.0%
!! GACAAAATAATTTGCACAAT+AGG - chr7_1:56420145-56420164 None:intergenic 25.0%
!!! ATTGTGCAAATTATTTTGTC+AGG + chr7_1:56420145-56420164 Msa1025650:CDS 25.0%
! TCAGAAACTAAATTATCATG+AGG - chr7_1:56420180-56420199 None:intergenic 25.0%
!! TAATTTAGTTTCTGATACAC+AGG + chr7_1:56420185-56420204 Msa1025650:CDS 25.0%
! AACATACAGAATTGCTAAAT+TGG + chr7_1:56420499-56420518 Msa1025650:CDS 25.0%
!! TCTGTATTGTATGTATGTTT+TGG + chr7_1:56420543-56420562 Msa1025650:CDS 25.0%
!! ATTCAGGTCATAATTTTATC+TGG + chr7_1:56420622-56420641 Msa1025650:CDS 25.0%
! TGTCACTATCTATGGATTTT+TGG - chr7_1:56419846-56419865 None:intergenic 30.0%
TAAACTGATGTCACTATCTA+TGG - chr7_1:56419854-56419873 None:intergenic 30.0%
ATAGATAGTGACATCAGTTT+AGG + chr7_1:56419853-56419872 Msa1025650:CDS 30.0%
ACAGAACTTCAATAGAATCT+CGG - chr7_1:56420008-56420027 None:intergenic 30.0%
ATATCAGTGACTATACAATC+TGG - chr7_1:56420045-56420064 None:intergenic 30.0%
TTAATGGTATGAGGTAAACA+AGG - chr7_1:56420222-56420241 None:intergenic 30.0%
!! TTCATACATCGGTTCAAAAT+AGG - chr7_1:56420298-56420317 None:intergenic 30.0%
TAACAAGGATGATGAAAGAA+AGG + chr7_1:56420443-56420462 Msa1025650:CDS 30.0%
AAAGATGATGAAGATGATGA+TGG + chr7_1:56420654-56420673 Msa1025650:CDS 30.0%
AAAGGATTAAAGAAAGCAAC+AGG + chr7_1:56420703-56420722 Msa1025650:CDS 30.0%
AAGGATTAAAGAAAGCAACA+GGG + chr7_1:56420704-56420723 Msa1025650:CDS 30.0%
TAAAATTGCTCAGCAAACAT+TGG - chr7_1:56420861-56420880 None:intergenic 30.0%
! AGCAATTTTACAATGAGAAG+TGG + chr7_1:56420871-56420890 Msa1025650:CDS 30.0%
!!! CTTGTTGATGTTTTGAAGAT+TGG + chr7_1:56420894-56420913 Msa1025650:CDS 30.0%
GAGCAAAAGAAAACAAGTTT+GGG + chr7_1:56420928-56420947 Msa1025650:CDS 30.0%
TAACATTAGTGAAGAGGAAA+TGG + chr7_1:56420953-56420972 Msa1025650:CDS 30.0%
! TGTCACTATCTATGGATTTT+TGG - chr7_1:56419846-56419865 None:intergenic 30.0%
TAAACTGATGTCACTATCTA+TGG - chr7_1:56419854-56419873 None:intergenic 30.0%
ATAGATAGTGACATCAGTTT+AGG + chr7_1:56419853-56419872 Msa1025650:CDS 30.0%
ACAGAACTTCAATAGAATCT+CGG - chr7_1:56420008-56420027 None:intergenic 30.0%
ATATCAGTGACTATACAATC+TGG - chr7_1:56420045-56420064 None:intergenic 30.0%
TTAATGGTATGAGGTAAACA+AGG - chr7_1:56420222-56420241 None:intergenic 30.0%
!! TTCATACATCGGTTCAAAAT+AGG - chr7_1:56420298-56420317 None:intergenic 30.0%
TAACAAGGATGATGAAAGAA+AGG + chr7_1:56420443-56420462 Msa1025650:CDS 30.0%
AAAGATGATGAAGATGATGA+TGG + chr7_1:56420654-56420673 Msa1025650:CDS 30.0%
AAAGGATTAAAGAAAGCAAC+AGG + chr7_1:56420703-56420722 Msa1025650:CDS 30.0%
AAGGATTAAAGAAAGCAACA+GGG + chr7_1:56420704-56420723 Msa1025650:CDS 30.0%
TAAAATTGCTCAGCAAACAT+TGG - chr7_1:56420861-56420880 None:intergenic 30.0%
! AGCAATTTTACAATGAGAAG+TGG + chr7_1:56420871-56420890 Msa1025650:CDS 30.0%
!!! CTTGTTGATGTTTTGAAGAT+TGG + chr7_1:56420894-56420913 Msa1025650:CDS 30.0%
GAGCAAAAGAAAACAAGTTT+GGG + chr7_1:56420928-56420947 Msa1025650:CDS 30.0%
TAACATTAGTGAAGAGGAAA+TGG + chr7_1:56420953-56420972 Msa1025650:CDS 30.0%
TGTCAATCATAGGGTTCATA+TGG - chr7_1:56419753-56419772 None:intergenic 35.0%
ATTGGCATGTGTAGATATGA+TGG - chr7_1:56419812-56419831 None:intergenic 35.0%
!!! TTTTTGGAACCTTGAAGCAT+TGG - chr7_1:56419830-56419849 None:intergenic 35.0%
TCACTGATATGATGTATCCT+TGG + chr7_1:56420055-56420074 Msa1025650:CDS 35.0%
CTGCAAAACTAAACATTCCA+AGG + chr7_1:56420091-56420110 Msa1025650:CDS 35.0%
ATTTGCACAATAGGAGAAGT+AGG - chr7_1:56420136-56420155 None:intergenic 35.0%
CTACAATCGGAATCAAATCA+TGG + chr7_1:56420394-56420413 Msa1025650:CDS 35.0%
ATGATGAAAGAAAGGCCAAT+AGG + chr7_1:56420451-56420470 Msa1025650:CDS 35.0%
TGATGAAAGAAAGGCCAATA+GGG + chr7_1:56420452-56420471 Msa1025650:CDS 35.0%
AGCTTGTAGAAATTGCACAT+GGG + chr7_1:56420592-56420611 Msa1025650:CDS 35.0%
!!! AGGTTTTTTGCAGGAATTTG+AGG + chr7_1:56420680-56420699 Msa1025650:CDS 35.0%
! TTTTGCAGGAATTTGAGGAA+AGG + chr7_1:56420685-56420704 Msa1025650:CDS 35.0%
AGGATTAAAGAAAGCAACAG+GGG + chr7_1:56420705-56420724 Msa1025650:CDS 35.0%
CAACAGGGGATATATCATAT+GGG + chr7_1:56420719-56420738 Msa1025650:CDS 35.0%
! GTTCTTGAAAGTGTAAATGC+TGG + chr7_1:56420816-56420835 Msa1025650:CDS 35.0%
! TTGTTTTCTTTTGCTCCTAC+GGG - chr7_1:56420924-56420943 None:intergenic 35.0%
!! CTTGTTTTCTTTTGCTCCTA+CGG - chr7_1:56420925-56420944 None:intergenic 35.0%
GGAGCAAAAGAAAACAAGTT+TGG + chr7_1:56420927-56420946 Msa1025650:CDS 35.0%
TGAAGAGGAAATGGTGAAAA+GGG + chr7_1:56420962-56420981 Msa1025650:CDS 35.0%
! TTGAAGAAATCCAAAGCACT+TGG + chr7_1:56421146-56421165 Msa1025650:CDS 35.0%
TGTCAATCATAGGGTTCATA+TGG - chr7_1:56419753-56419772 None:intergenic 35.0%
ATTGGCATGTGTAGATATGA+TGG - chr7_1:56419812-56419831 None:intergenic 35.0%
!!! TTTTTGGAACCTTGAAGCAT+TGG - chr7_1:56419830-56419849 None:intergenic 35.0%
TCACTGATATGATGTATCCT+TGG + chr7_1:56420055-56420074 Msa1025650:CDS 35.0%
CTGCAAAACTAAACATTCCA+AGG + chr7_1:56420091-56420110 Msa1025650:CDS 35.0%
ATTTGCACAATAGGAGAAGT+AGG - chr7_1:56420136-56420155 None:intergenic 35.0%
CTACAATCGGAATCAAATCA+TGG + chr7_1:56420394-56420413 Msa1025650:CDS 35.0%
ATGATGAAAGAAAGGCCAAT+AGG + chr7_1:56420451-56420470 Msa1025650:CDS 35.0%
TGATGAAAGAAAGGCCAATA+GGG + chr7_1:56420452-56420471 Msa1025650:CDS 35.0%
AGCTTGTAGAAATTGCACAT+GGG + chr7_1:56420592-56420611 Msa1025650:CDS 35.0%
!!! AGGTTTTTTGCAGGAATTTG+AGG + chr7_1:56420680-56420699 Msa1025650:CDS 35.0%
! TTTTGCAGGAATTTGAGGAA+AGG + chr7_1:56420685-56420704 Msa1025650:CDS 35.0%
AGGATTAAAGAAAGCAACAG+GGG + chr7_1:56420705-56420724 Msa1025650:CDS 35.0%
CAACAGGGGATATATCATAT+GGG + chr7_1:56420719-56420738 Msa1025650:CDS 35.0%
! GTTCTTGAAAGTGTAAATGC+TGG + chr7_1:56420816-56420835 Msa1025650:CDS 35.0%
! TTGTTTTCTTTTGCTCCTAC+GGG - chr7_1:56420924-56420943 None:intergenic 35.0%
!! CTTGTTTTCTTTTGCTCCTA+CGG - chr7_1:56420925-56420944 None:intergenic 35.0%
GGAGCAAAAGAAAACAAGTT+TGG + chr7_1:56420927-56420946 Msa1025650:CDS 35.0%
TGAAGAGGAAATGGTGAAAA+GGG + chr7_1:56420962-56420981 Msa1025650:CDS 35.0%
! TTGAAGAAATCCAAAGCACT+TGG + chr7_1:56421146-56421165 Msa1025650:CDS 35.0%
TTTCTTCCATATCCAACTGC+TGG + chr7_1:56419727-56419746 Msa1025650:CDS 40.0%
ACCAAGCATTTCACTTGAAG+TGG - chr7_1:56419959-56419978 None:intergenic 40.0%
GCGATGTAAAAGTGAATCCT+TGG - chr7_1:56420111-56420130 None:intergenic 40.0%
AAGGGAAAACAATGCTAGCA+CGG + chr7_1:56420272-56420291 Msa1025650:CDS 40.0%
TGAACCGATGTATGAATCAG+CGG + chr7_1:56420302-56420321 Msa1025650:CDS 40.0%
!! CTTTCCGCTGATTCATACAT+CGG - chr7_1:56420309-56420328 None:intergenic 40.0%
AATCAGCGGAAAGAAGCTAT+GGG + chr7_1:56420316-56420335 Msa1025650:CDS 40.0%
GGAATCAAATCATGGAGTGT+CGG + chr7_1:56420402-56420421 Msa1025650:CDS 40.0%
GATGAAAGAAAGGCCAATAG+GGG + chr7_1:56420453-56420472 Msa1025650:CDS 40.0%
ATTTCTACAAGCTGAGCATG+AGG - chr7_1:56420585-56420604 None:intergenic 40.0%
CAGCTTGTAGAAATTGCACA+TGG + chr7_1:56420591-56420610 Msa1025650:CDS 40.0%
!! GATGAAGATGATGATGGAGA+AGG + chr7_1:56420660-56420679 Msa1025650:CDS 40.0%
!!! TGATGGAGAAGGTTTTTTGC+AGG + chr7_1:56420671-56420690 Msa1025650:CDS 40.0%
GCAACAGGGGATATATCATA+TGG + chr7_1:56420718-56420737 Msa1025650:CDS 40.0%
GGGATATATCATATGGGACT+GGG + chr7_1:56420725-56420744 Msa1025650:CDS 40.0%
! TGTTTTCTTTTGCTCCTACG+GGG - chr7_1:56420923-56420942 None:intergenic 40.0%
TGGGACTAACATTAGTGAAG+AGG + chr7_1:56420947-56420966 Msa1025650:CDS 40.0%
GTGAAGAGGAAATGGTGAAA+AGG + chr7_1:56420961-56420980 Msa1025650:CDS 40.0%
! TGAGGCTGTGAAGATTTTGA+TGG + chr7_1:56420995-56421014 Msa1025650:CDS 40.0%
!! GAGGCTGTGAAGATTTTGAT+GGG + chr7_1:56420996-56421015 Msa1025650:CDS 40.0%
ACCAAGAGAGCAAAGAAATG+AGG + chr7_1:56421024-56421043 Msa1025650:CDS 40.0%
TCCTCATTTCTTTGCTCTCT+TGG - chr7_1:56421028-56421047 None:intergenic 40.0%
AGGATGAGAGCAAAGAAACT+TGG + chr7_1:56421044-56421063 Msa1025650:CDS 40.0%
TTTCTTCCATATCCAACTGC+TGG + chr7_1:56419727-56419746 Msa1025650:CDS 40.0%
ACCAAGCATTTCACTTGAAG+TGG - chr7_1:56419959-56419978 None:intergenic 40.0%
GCGATGTAAAAGTGAATCCT+TGG - chr7_1:56420111-56420130 None:intergenic 40.0%
AAGGGAAAACAATGCTAGCA+CGG + chr7_1:56420272-56420291 Msa1025650:CDS 40.0%
TGAACCGATGTATGAATCAG+CGG + chr7_1:56420302-56420321 Msa1025650:CDS 40.0%
!! CTTTCCGCTGATTCATACAT+CGG - chr7_1:56420309-56420328 None:intergenic 40.0%
AATCAGCGGAAAGAAGCTAT+GGG + chr7_1:56420316-56420335 Msa1025650:CDS 40.0%
GGAATCAAATCATGGAGTGT+CGG + chr7_1:56420402-56420421 Msa1025650:CDS 40.0%
GATGAAAGAAAGGCCAATAG+GGG + chr7_1:56420453-56420472 Msa1025650:CDS 40.0%
ATTTCTACAAGCTGAGCATG+AGG - chr7_1:56420585-56420604 None:intergenic 40.0%
CAGCTTGTAGAAATTGCACA+TGG + chr7_1:56420591-56420610 Msa1025650:CDS 40.0%
!! GATGAAGATGATGATGGAGA+AGG + chr7_1:56420660-56420679 Msa1025650:CDS 40.0%
!!! TGATGGAGAAGGTTTTTTGC+AGG + chr7_1:56420671-56420690 Msa1025650:CDS 40.0%
GCAACAGGGGATATATCATA+TGG + chr7_1:56420718-56420737 Msa1025650:CDS 40.0%
GGGATATATCATATGGGACT+GGG + chr7_1:56420725-56420744 Msa1025650:CDS 40.0%
! TGTTTTCTTTTGCTCCTACG+GGG - chr7_1:56420923-56420942 None:intergenic 40.0%
TGGGACTAACATTAGTGAAG+AGG + chr7_1:56420947-56420966 Msa1025650:CDS 40.0%
GTGAAGAGGAAATGGTGAAA+AGG + chr7_1:56420961-56420980 Msa1025650:CDS 40.0%
! TGAGGCTGTGAAGATTTTGA+TGG + chr7_1:56420995-56421014 Msa1025650:CDS 40.0%
!! GAGGCTGTGAAGATTTTGAT+GGG + chr7_1:56420996-56421015 Msa1025650:CDS 40.0%
ACCAAGAGAGCAAAGAAATG+AGG + chr7_1:56421024-56421043 Msa1025650:CDS 40.0%
TCCTCATTTCTTTGCTCTCT+TGG - chr7_1:56421028-56421047 None:intergenic 40.0%
AGGATGAGAGCAAAGAAACT+TGG + chr7_1:56421044-56421063 Msa1025650:CDS 40.0%
ATATGGCCAGCAGTTGGATA+TGG - chr7_1:56419736-56419755 None:intergenic 45.0%
ACCCTATGATTGACACAGCA+AGG + chr7_1:56419758-56419777 Msa1025650:CDS 45.0%
! GCCTTGCTGTGTCAATCATA+GGG - chr7_1:56419762-56419781 None:intergenic 45.0%
! AGCCTTGCTGTGTCAATCAT+AGG - chr7_1:56419763-56419782 None:intergenic 45.0%
GCAAGGCTATTTGCAAAGCA+TGG + chr7_1:56419775-56419794 Msa1025650:CDS 45.0%
CTACACATGCCAATGCTTCA+AGG + chr7_1:56419818-56419837 Msa1025650:CDS 45.0%
CAGTTCCATTCAGCTCAAGT+TGG + chr7_1:56419901-56419920 Msa1025650:CDS 45.0%
! CCAAGTTTTCAACACCGTCA+GGG - chr7_1:56419930-56419949 None:intergenic 45.0%
! ACCAAGTTTTCAACACCGTC+AGG - chr7_1:56419931-56419950 None:intergenic 45.0%
GCCACTTCAAGTGAAATGCT+TGG + chr7_1:56419955-56419974 Msa1025650:CDS 45.0%
ATGCTTGGTAAAGTCACTCG+TGG + chr7_1:56419970-56419989 Msa1025650:CDS 45.0%
GTAAAGTCACTCGTGGAGTA+TGG + chr7_1:56419977-56419996 Msa1025650:CDS 45.0%
CGGGTCATCTTAATGGTATG+AGG - chr7_1:56420231-56420250 None:intergenic 45.0%
CTGAAGACGGGTCATCTTAA+TGG - chr7_1:56420238-56420257 None:intergenic 45.0%
TTCAGCTTCGTGATTGGGAA+AGG + chr7_1:56420253-56420272 Msa1025650:CDS 45.0%
TCAGCTTCGTGATTGGGAAA+GGG + chr7_1:56420254-56420273 Msa1025650:CDS 45.0%
GAATCAGCGGAAAGAAGCTA+TGG + chr7_1:56420315-56420334 Msa1025650:CDS 45.0%
TTGTTAGCCCAAGCTGAAAC+TGG - chr7_1:56420429-56420448 None:intergenic 45.0%
AGTTTCAGCTTGGGCTAACA+AGG + chr7_1:56420428-56420447 Msa1025650:CDS 45.0%
TTTCTCCATGTGTCCCCTAT+TGG - chr7_1:56420469-56420488 None:intergenic 45.0%
GGACACATGGAGAAAAGCTT+AGG + chr7_1:56420474-56420493 Msa1025650:CDS 45.0%
!!! TATGTTTTGGCAGCCTTGCT+AGG + chr7_1:56420556-56420575 Msa1025650:CDS 45.0%
GCACATGGGCTTGAAAATTC+AGG + chr7_1:56420606-56420625 Msa1025650:CDS 45.0%
GGGGATATATCATATGGGAC+TGG + chr7_1:56420724-56420743 Msa1025650:CDS 45.0%
TGGTCCAATATCAGAAGCTG+TGG - chr7_1:56420753-56420772 None:intergenic 45.0%
ACAATGAGTCACAAACCCTC+CGG - chr7_1:56420784-56420803 None:intergenic 45.0%
GGTTTGTGACTCATTGTGGT+TGG + chr7_1:56420787-56420806 Msa1025650:CDS 45.0%
AACATTGGCCACGTGATCAT+TGG - chr7_1:56420846-56420865 None:intergenic 45.0%
GAAAAGGGAAGAGATAGCTG+AGG + chr7_1:56420977-56420996 Msa1025650:CDS 45.0%
ACCTTCCTCTATAGTCCTCT+TGG - chr7_1:56421078-56421097 None:intergenic 45.0%
AAGAGGACTATAGAGGAAGG+TGG + chr7_1:56421077-56421096 Msa1025650:CDS 45.0%
TGCTTTCTCACCAAGTGCTT+TGG - chr7_1:56421159-56421178 None:intergenic 45.0%
ATATGGCCAGCAGTTGGATA+TGG - chr7_1:56419736-56419755 None:intergenic 45.0%
ACCCTATGATTGACACAGCA+AGG + chr7_1:56419758-56419777 Msa1025650:CDS 45.0%
! GCCTTGCTGTGTCAATCATA+GGG - chr7_1:56419762-56419781 None:intergenic 45.0%
! AGCCTTGCTGTGTCAATCAT+AGG - chr7_1:56419763-56419782 None:intergenic 45.0%
GCAAGGCTATTTGCAAAGCA+TGG + chr7_1:56419775-56419794 Msa1025650:CDS 45.0%
CTACACATGCCAATGCTTCA+AGG + chr7_1:56419818-56419837 Msa1025650:CDS 45.0%
CAGTTCCATTCAGCTCAAGT+TGG + chr7_1:56419901-56419920 Msa1025650:CDS 45.0%
! CCAAGTTTTCAACACCGTCA+GGG - chr7_1:56419930-56419949 None:intergenic 45.0%
! ACCAAGTTTTCAACACCGTC+AGG - chr7_1:56419931-56419950 None:intergenic 45.0%
GCCACTTCAAGTGAAATGCT+TGG + chr7_1:56419955-56419974 Msa1025650:CDS 45.0%
ATGCTTGGTAAAGTCACTCG+TGG + chr7_1:56419970-56419989 Msa1025650:CDS 45.0%
GTAAAGTCACTCGTGGAGTA+TGG + chr7_1:56419977-56419996 Msa1025650:CDS 45.0%
CGGGTCATCTTAATGGTATG+AGG - chr7_1:56420231-56420250 None:intergenic 45.0%
CTGAAGACGGGTCATCTTAA+TGG - chr7_1:56420238-56420257 None:intergenic 45.0%
TTCAGCTTCGTGATTGGGAA+AGG + chr7_1:56420253-56420272 Msa1025650:CDS 45.0%
TCAGCTTCGTGATTGGGAAA+GGG + chr7_1:56420254-56420273 Msa1025650:CDS 45.0%
GAATCAGCGGAAAGAAGCTA+TGG + chr7_1:56420315-56420334 Msa1025650:CDS 45.0%
TTGTTAGCCCAAGCTGAAAC+TGG - chr7_1:56420429-56420448 None:intergenic 45.0%
AGTTTCAGCTTGGGCTAACA+AGG + chr7_1:56420428-56420447 Msa1025650:CDS 45.0%
TTTCTCCATGTGTCCCCTAT+TGG - chr7_1:56420469-56420488 None:intergenic 45.0%
GGACACATGGAGAAAAGCTT+AGG + chr7_1:56420474-56420493 Msa1025650:CDS 45.0%
!!! TATGTTTTGGCAGCCTTGCT+AGG + chr7_1:56420556-56420575 Msa1025650:CDS 45.0%
GCACATGGGCTTGAAAATTC+AGG + chr7_1:56420606-56420625 Msa1025650:CDS 45.0%
GGGGATATATCATATGGGAC+TGG + chr7_1:56420724-56420743 Msa1025650:CDS 45.0%
TGGTCCAATATCAGAAGCTG+TGG - chr7_1:56420753-56420772 None:intergenic 45.0%
ACAATGAGTCACAAACCCTC+CGG - chr7_1:56420784-56420803 None:intergenic 45.0%
GGTTTGTGACTCATTGTGGT+TGG + chr7_1:56420787-56420806 Msa1025650:CDS 45.0%
AACATTGGCCACGTGATCAT+TGG - chr7_1:56420846-56420865 None:intergenic 45.0%
GAAAAGGGAAGAGATAGCTG+AGG + chr7_1:56420977-56420996 Msa1025650:CDS 45.0%
ACCTTCCTCTATAGTCCTCT+TGG - chr7_1:56421078-56421097 None:intergenic 45.0%
AAGAGGACTATAGAGGAAGG+TGG + chr7_1:56421077-56421096 Msa1025650:CDS 45.0%
TGCTTTCTCACCAAGTGCTT+TGG - chr7_1:56421159-56421178 None:intergenic 45.0%
GGAGACCAACTTGAGCTGAA+TGG - chr7_1:56419909-56419928 None:intergenic 50.0%
! CCCTGACGGTGTTGAAAACT+TGG + chr7_1:56419927-56419946 Msa1025650:CDS 50.0%
! GCAGCTGATTCTACAGTCCA+AGG - chr7_1:56420075-56420094 None:intergenic 50.0%
CCAATCACGAAGCTGAAGAC+GGG - chr7_1:56420250-56420269 None:intergenic 50.0%
CCCAATCACGAAGCTGAAGA+CGG - chr7_1:56420251-56420270 None:intergenic 50.0%
CCGTCTTCAGCTTCGTGATT+GGG + chr7_1:56420248-56420267 Msa1025650:CDS 50.0%
TGTCGGACCAGTTTCAGCTT+GGG + chr7_1:56420419-56420438 Msa1025650:CDS 50.0%
AAAGGCCAATAGGGGACACA+TGG + chr7_1:56420461-56420480 Msa1025650:CDS 50.0%
GGCACCACAGCTTCTGATAT+TGG + chr7_1:56420746-56420765 Msa1025650:CDS 50.0%
ATATTGGACCACCCTGCAAC+CGG + chr7_1:56420762-56420781 Msa1025650:CDS 50.0%
GGAGGGTTTGTGACTCATTG+TGG + chr7_1:56420783-56420802 Msa1025650:CDS 50.0%
! CTGGTTTGCCAATGATCACG+TGG + chr7_1:56420835-56420854 Msa1025650:CDS 50.0%
! TTGAAGATTGGTGTCCCCGT+AGG + chr7_1:56420906-56420925 Msa1025650:CDS 50.0%
!! AACTTGGTGATGCTGCCAAG+AGG + chr7_1:56421060-56421079 Msa1025650:CDS 50.0%
TGCTGCCAAGAGGACTATAG+AGG + chr7_1:56421070-56421089 Msa1025650:CDS 50.0%
GCCAAGAGGACTATAGAGGA+AGG + chr7_1:56421074-56421093 Msa1025650:CDS 50.0%
GGAGACCAACTTGAGCTGAA+TGG - chr7_1:56419909-56419928 None:intergenic 50.0%
! CCCTGACGGTGTTGAAAACT+TGG + chr7_1:56419927-56419946 Msa1025650:CDS 50.0%
! GCAGCTGATTCTACAGTCCA+AGG - chr7_1:56420075-56420094 None:intergenic 50.0%
CCAATCACGAAGCTGAAGAC+GGG - chr7_1:56420250-56420269 None:intergenic 50.0%
CCCAATCACGAAGCTGAAGA+CGG - chr7_1:56420251-56420270 None:intergenic 50.0%
CCGTCTTCAGCTTCGTGATT+GGG + chr7_1:56420248-56420267 Msa1025650:CDS 50.0%
TGTCGGACCAGTTTCAGCTT+GGG + chr7_1:56420419-56420438 Msa1025650:CDS 50.0%
AAAGGCCAATAGGGGACACA+TGG + chr7_1:56420461-56420480 Msa1025650:CDS 50.0%
GGCACCACAGCTTCTGATAT+TGG + chr7_1:56420746-56420765 Msa1025650:CDS 50.0%
ATATTGGACCACCCTGCAAC+CGG + chr7_1:56420762-56420781 Msa1025650:CDS 50.0%
GGAGGGTTTGTGACTCATTG+TGG + chr7_1:56420783-56420802 Msa1025650:CDS 50.0%
! CTGGTTTGCCAATGATCACG+TGG + chr7_1:56420835-56420854 Msa1025650:CDS 50.0%
! TTGAAGATTGGTGTCCCCGT+AGG + chr7_1:56420906-56420925 Msa1025650:CDS 50.0%
!! AACTTGGTGATGCTGCCAAG+AGG + chr7_1:56421060-56421079 Msa1025650:CDS 50.0%
TGCTGCCAAGAGGACTATAG+AGG + chr7_1:56421070-56421089 Msa1025650:CDS 50.0%
GCCAAGAGGACTATAGAGGA+AGG + chr7_1:56421074-56421093 Msa1025650:CDS 50.0%
GGGTTCATATGGCCAGCAGT+TGG - chr7_1:56419742-56419761 None:intergenic 55.0%
!! GCTCAAGTTGGTCTCCCTGA+CGG + chr7_1:56419913-56419932 Msa1025650:CDS 55.0%
CCCGTCTTCAGCTTCGTGAT+TGG + chr7_1:56420247-56420266 Msa1025650:CDS 55.0%
GTGTCGGACCAGTTTCAGCT+TGG + chr7_1:56420418-56420437 Msa1025650:CDS 55.0%
GAGCATGAGGAAGCCTAGCA+AGG - chr7_1:56420572-56420591 None:intergenic 55.0%
TCACAAACCCTCCGGTTGCA+GGG - chr7_1:56420776-56420795 None:intergenic 55.0%
GGGTTCATATGGCCAGCAGT+TGG - chr7_1:56419742-56419761 None:intergenic 55.0%
!! GCTCAAGTTGGTCTCCCTGA+CGG + chr7_1:56419913-56419932 Msa1025650:CDS 55.0%
CCCGTCTTCAGCTTCGTGAT+TGG + chr7_1:56420247-56420266 Msa1025650:CDS 55.0%
GTGTCGGACCAGTTTCAGCT+TGG + chr7_1:56420418-56420437 Msa1025650:CDS 55.0%
GAGCATGAGGAAGCCTAGCA+AGG - chr7_1:56420572-56420591 None:intergenic 55.0%
TCACAAACCCTCCGGTTGCA+GGG - chr7_1:56420776-56420795 None:intergenic 55.0%
GTCACAAACCCTCCGGTTGC+AGG - chr7_1:56420777-56420796 None:intergenic 60.0%
GTCACAAACCCTCCGGTTGC+AGG - chr7_1:56420777-56420796 None:intergenic 60.0%
TTGGACCACCCTGCAACCGG+AGG + chr7_1:56420765-56420784 Msa1025650:CDS 65.0%
TGGACCACCCTGCAACCGGA+GGG + chr7_1:56420766-56420785 Msa1025650:CDS 65.0%
CAAACCCTCCGGTTGCAGGG+TGG - chr7_1:56420773-56420792 None:intergenic 65.0%
TTGGACCACCCTGCAACCGG+AGG + chr7_1:56420765-56420784 Msa1025650:CDS 65.0%
TGGACCACCCTGCAACCGGA+GGG + chr7_1:56420766-56420785 Msa1025650:CDS 65.0%
CAAACCCTCCGGTTGCAGGG+TGG - chr7_1:56420773-56420792 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 56419688 56421184 56419688 ID=Msa1025650;Name=Msa1025650
chr7_1 mRNA 56419688 56421184 56419688 ID=Msa1025650-mRNA-1;Parent=Msa1025650;Name=Msa1025650-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|-1|0|1|-1|1|1|0|498
chr7_1 exon 56419688 56421184 56419688 ID=Msa1025650-mRNA-1:exon:11296;Parent=Msa1025650-mRNA-1
chr7_1 CDS 56419688 56421184 56419688 ID=Msa1025650-mRNA-1:cds;Parent=Msa1025650-mRNA-1
Gene Sequence

>Msa1025650

ATGGAGTCTCAACAATCCCATAACAAAATTCATGTAGTTTTTCTTCCATATCCAACTGCTGGCCATATGAACCCTATGATTGACACAGCAAGGCTATTTGCAAAGCATGGTGTTAATGTTACCATCATATCTACACATGCCAATGCTTCAAGGTTCCAAAAATCCATAGATAGTGACATCAGTTTAGGATACTCCATTAAAATTCAACTTCTTCAGTTCCATTCAGCTCAAGTTGGTCTCCCTGACGGTGTTGAAAACTTGGTTGATGCCACTTCAAGTGAAATGCTTGGTAAAGTCACTCGTGGAGTATGGATGCTCCGAGATTCTATTGAAGTTCTGTTTAAAGAACTTCAACCAGATTGTATAGTCACTGATATGATGTATCCTTGGACTGTAGAATCAGCTGCAAAACTAAACATTCCAAGGATTCACTTTTACATCGCATCCTACTTCTCCTATTGTGCAAATTATTTTGTCAGGAAGTATAGACCTCATGATAATTTAGTTTCTGATACACAGGAGTTTACAATTCCTTGTTTACCTCATACCATTAAGATGACCCGTCTTCAGCTTCGTGATTGGGAAAGGGAAAACAATGCTAGCACGGCCTATTTTGAACCGATGTATGAATCAGCGGAAAGAAGCTATGGGTCACTATGCAACAGTTTTCATGAACTTGAAAGTGATTATGAGAAACTTTTTAAAACTACAATCGGAATCAAATCATGGAGTGTCGGACCAGTTTCAGCTTGGGCTAACAAGGATGATGAAAGAAAGGCCAATAGGGGACACATGGAGAAAAGCTTAGGAAAACATACAGAATTGCTAAATTGGCTAAACTCGCAGCAAAATGACTCTGTATTGTATGTATGTTTTGGCAGCCTTGCTAGGCTTCCTCATGCTCAGCTTGTAGAAATTGCACATGGGCTTGAAAATTCAGGTCATAATTTTATCTGGCTGATAAAAAAAGATGATGAAGATGATGATGGAGAAGGTTTTTTGCAGGAATTTGAGGAAAGGATTAAAGAAAGCAACAGGGGATATATCATATGGGACTGGGCACCACAGCTTCTGATATTGGACCACCCTGCAACCGGAGGGTTTGTGACTCATTGTGGTTGGAACTCAGTTCTTGAAAGTGTAAATGCTGGTTTGCCAATGATCACGTGGCCAATGTTTGCTGAGCAATTTTACAATGAGAAGTGGCTTGTTGATGTTTTGAAGATTGGTGTCCCCGTAGGAGCAAAAGAAAACAAGTTTGGGACTAACATTAGTGAAGAGGAAATGGTGAAAAGGGAAGAGATAGCTGAGGCTGTGAAGATTTTGATGGGAAGTGACCAAGAGAGCAAAGAAATGAGGATGAGAGCAAAGAAACTTGGTGATGCTGCCAAGAGGACTATAGAGGAAGGTGGACACTCTTACAACAACTTGATTCAGTTGATTGATGAGCTGAAATCATTGAAGAAATCCAAAGCACTTGGTGAGAAAGCAGATTAG

Protein sequence

>Msa1025650

MESQQSHNKIHVVFLPYPTAGHMNPMIDTARLFAKHGVNVTIISTHANASRFQKSIDSDISLGYSIKIQLLQFHSAQVGLPDGVENLVDATSSEMLGKVTRGVWMLRDSIEVLFKELQPDCIVTDMMYPWTVESAAKLNIPRIHFYIASYFSYCANYFVRKYRPHDNLVSDTQEFTIPCLPHTIKMTRLQLRDWERENNASTAYFEPMYESAERSYGSLCNSFHELESDYEKLFKTTIGIKSWSVGPVSAWANKDDERKANRGHMEKSLGKHTELLNWLNSQQNDSVLYVCFGSLARLPHAQLVEIAHGLENSGHNFIWLIKKDDEDDDGEGFLQEFEERIKESNRGYIIWDWAPQLLILDHPATGGFVTHCGWNSVLESVNAGLPMITWPMFAEQFYNEKWLVDVLKIGVPVGAKENKFGTNISEEEMVKREEIAEAVKILMGSDQESKEMRMRAKKLGDAAKRTIEEGGHSYNNLIQLIDELKSLKKSKALGEKAD*