AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0815380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0815380 MtrunA17_Chr5g0433511 89.925 536 33 2 1 536 419 933 0.0 949
Msa0815380 MtrunA17_Chr5g0433421 83.107 515 87 0 1 515 485 999 0.0 878
Msa0815380 MtrunA17_Chr5g0433471 75.283 530 115 4 2 518 391 917 0.0 751
Msa0815380 MtrunA17_Chr3g0109541 59.041 542 195 7 1 524 392 924 0.0 599
Msa0815380 MtrunA17_Chr5g0433371 58.287 537 198 7 1 515 383 915 0.0 588
Msa0815380 MtrunA17_Chr5g0433361 66.518 448 124 5 77 513 451 883 0.0 574
Msa0815380 MtrunA17_Chr5g0433321 54.393 535 196 9 1 515 385 891 0.0 549
Msa0815380 MtrunA17_Chr3g0109551 48.156 488 219 9 44 509 473 948 1.92e-142 439
Msa0815380 MtrunA17_Chr3g0094211 43.046 453 236 6 75 506 426 877 6.10e-118 372
Msa0815380 MtrunA17_Chr8g0375181 43.750 448 228 7 74 500 507 951 1.98e-111 366
Msa0815380 MtrunA17_Chr8g0375191 44.944 445 219 9 74 500 438 874 4.51e-109 359
Msa0815380 MtrunA17_Chr8g0375151 44.295 447 224 8 74 500 402 843 4.61e-108 356
Msa0815380 MtrunA17_Chr5g0433341 78.075 187 40 1 171 356 1 187 7.31e-100 300
Msa0815380 MtrunA17_Chr5g0433331 84.076 157 25 0 359 515 1 157 8.17e-91 276
Msa0815380 MtrunA17_Chr8g0343741 38.291 316 181 9 170 479 960 1267 9.62e-54 197
Msa0815380 MtrunA17_Chr2g0334291 41.489 282 145 7 207 473 1791 2067 1.60e-49 185
Msa0815380 MtrunA17_Chr5g0422511 36.913 298 182 6 183 478 458 751 2.72e-49 182
Msa0815380 MtrunA17_Chr1g0173701 36.531 271 165 6 213 480 108 374 8.12e-47 169
Msa0815380 MtrunA17_Chr5g0400101 35.926 270 166 5 207 474 641 905 6.38e-40 155
Msa0815380 MtrunA17_Chr7g0257921 35.135 296 147 10 206 480 370 641 4.21e-31 128
Msa0815380 MtrunA17_Chr5g0435821 52.727 110 47 1 389 498 6 110 4.58e-31 127
Msa0815380 MtrunA17_Chr8g0375871 38.793 232 107 9 74 280 438 659 2.35e-30 127
Msa0815380 MtrunA17_Chr8g0375861 38.793 232 107 9 74 280 438 659 2.59e-30 127
Msa0815380 MtrunA17_Chr5g0394941 29.942 344 192 12 159 466 477 807 1.55e-26 114
Msa0815380 MtrunA17_Chr2g0304151 29.942 344 192 12 159 466 477 807 1.78e-26 114
Msa0815380 MtrunA17_Chr1g0165651 30.565 301 179 10 181 463 631 919 2.78e-21 98.6
Msa0815380 MtrunA17_Chr1g0165031 30.469 256 155 9 207 449 1130 1375 5.77e-16 82.0
Msa0815380 MtrunA17_Chr5g0433351 68.519 54 14 1 77 127 417 470 1.57e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0815380 AT1G65810.2 51.740 431 186 4 68 489 420 837 2.17e-146 447
Msa0815380 AT1G65810.3 51.740 431 186 4 68 489 420 837 5.11e-146 447
Msa0815380 AT1G65810.1 51.740 431 186 4 68 489 420 837 6.19e-146 447
Msa0815380 AT5G52090.1 51.620 432 198 5 68 494 230 655 3.67e-145 434
Msa0815380 AT5G37150.1 50.694 432 202 5 68 494 393 818 1.32e-140 427
Msa0815380 AT5G37140.1 49.649 427 207 3 69 494 252 671 1.94e-136 412
Msa0815380 AT4G05540.1 53.367 401 167 6 69 461 301 689 4.78e-136 411
Msa0815380 AT5G37165.1 49.409 423 198 6 94 510 4 416 1.04e-135 401
Msa0815380 AT5G37030.1 61.224 294 111 2 200 491 344 636 1.02e-122 375
Msa0815380 AT1G65780.1 42.509 534 248 10 1 511 372 869 5.83e-122 385
Msa0815380 AT2G19120.1 38.906 329 177 11 161 479 733 1047 4.09e-54 198
Msa0815380 AT4G15570.2 36.735 294 179 6 183 473 373 662 9.94e-52 189
Msa0815380 AT4G15570.4 36.735 294 179 6 183 473 373 662 9.94e-52 189
Msa0815380 AT4G15570.3 36.735 294 179 6 183 473 462 751 2.86e-51 189
Msa0815380 AT4G15570.1 36.735 294 179 6 183 473 462 751 2.86e-51 189
Msa0815380 AT4G30100.2 37.975 316 174 10 170 475 903 1206 9.36e-51 189
Msa0815380 AT4G30100.1 37.975 316 174 10 170 475 903 1206 9.36e-51 189
Msa0815380 AT1G16800.3 38.628 277 156 6 207 473 1649 1921 1.32e-45 174
Msa0815380 AT1G16800.1 38.489 278 157 6 207 474 1607 1880 1.56e-45 173
Msa0815380 AT1G16800.2 38.628 277 156 6 207 473 1719 1991 1.75e-45 173
Msa0815380 AT5G47010.1 33.766 308 192 7 171 474 618 917 2.04e-40 157
Msa0815380 AT2G03270.1 34.202 307 154 12 182 466 342 622 2.48e-29 123
Msa0815380 AT1G05460.2 32.381 315 179 12 185 477 518 820 7.65e-26 113
Msa0815380 AT1G05460.1 32.166 314 179 11 185 476 518 819 1.84e-25 112
Msa0815380 AT5G35970.1 31.788 302 178 10 181 465 639 929 3.83e-23 104
Msa0815380 AT2G38770.1 30.233 258 153 9 207 449 1120 1365 8.33e-16 81.6

Find 158 sgRNAs with CRISPR-Local

Find 624 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGACAACAAATGTTCGTATT+TGG 0.157759 5_3:-48901373 Msa0815380:five_prime_UTR
ATCAACAGTTTGCTTAAATT+TGG 0.159588 5_3:+48899838 None:intergenic
TTAACTGAAATGAAAGATTT+TGG 0.166091 5_3:+48899917 None:intergenic
TACCATATTGCCTATGTTAA+TGG 0.194743 5_3:-48901518 Msa0815380:five_prime_UTR
CTTCAACATTGCATTCTTAT+AGG 0.203067 5_3:-48898800 Msa0815380:CDS
TTAAGTGACATTGTGCTATT+TGG 0.225562 5_3:-48900696 Msa0815380:five_prime_UTR
ATGCTAATACCAAACTGATA+TGG 0.238865 5_3:-48900887 Msa0815380:five_prime_UTR
GTTAATGTTCGTTCTGTTGA+TGG 0.262048 5_3:-48898086 Msa0815380:CDS
TTATAGATATTGTACTTTCT+TGG 0.269492 5_3:-48902519 Msa0815380:five_prime_UTR
TCCTAGTAAACAATATTTCT+TGG 0.275195 5_3:-48900538 Msa0815380:five_prime_UTR
AATGATTGTTTAGCAAATAA+TGG 0.290512 5_3:-48902569 Msa0815380:intron
CCCCATTAACATAGGCAATA+TGG 0.296858 5_3:+48901516 None:intergenic
AGATATTGTCTTTGGATATT+AGG 0.300734 5_3:-48897866 Msa0815380:CDS
AACATCCATCTTCATGCATT+TGG 0.305607 5_3:+48901454 None:intergenic
TCATAAACTTGAGCATTATA+TGG 0.306286 5_3:+48898161 None:intergenic
ACCATATTGCCTATGTTAAT+GGG 0.311487 5_3:-48901517 Msa0815380:five_prime_UTR
TTTCTTGGAGATGTCCAAAA+AGG 0.312865 5_3:-48900523 Msa0815380:five_prime_UTR
TCATTTCTTTCCAAACTTGA+TGG 0.314537 5_3:+48899779 None:intergenic
GGAGTAATTATGTTTGAAAT+AGG 0.314940 5_3:+48897319 None:intergenic
CAATTTGTGAAGCAGAGATT+TGG 0.321672 5_3:-48899992 Msa0815380:CDS
ACCCTTTGACTTTGAGTTCA+AGG 0.323180 5_3:+48901346 None:intergenic
CAAGGAAACAAGCTTATTGA+TGG 0.334295 5_3:+48898545 None:intergenic
GAAAGCATTCCTGCTTGCTT+TGG 0.336536 5_3:-48899803 Msa0815380:CDS
CTAACAATTGTTCTCCTTTG+AGG 0.337621 5_3:-48909272 Msa0815380:five_prime_UTR
ATTGCGGACAATTGTCGATT+TGG 0.348564 5_3:-48898641 Msa0815380:CDS
TTTGAGAAAATTTGCTCTCT+AGG 0.357550 5_3:+48900193 None:intergenic
TGCTAATACCAAACTGATAT+GGG 0.358247 5_3:-48900886 Msa0815380:five_prime_UTR
GATTTATCTTCAAGCTTGTC+TGG 0.361546 5_3:-48901776 Msa0815380:five_prime_UTR
TAGCCAGTAGTGATTCTATC+TGG 0.363659 5_3:-48897829 Msa0815380:CDS
GTGCATACAAGGAAAATATA+AGG 0.370607 5_3:-48900111 Msa0815380:CDS
TGATGTCTCACTTTAAATTC+AGG 0.371221 5_3:+48899713 None:intergenic
TTGCTTTGGACCATCAAGTT+TGG 0.374499 5_3:-48899789 Msa0815380:CDS
TGCAACACTGCAGTATTAGT+TGG 0.387175 5_3:+48900777 None:intergenic
GTAATTCTTACATTGAGATT+AGG 0.388186 5_3:+48901290 None:intergenic
GGTTACAAGCTGTGCTAGTA+TGG 0.391737 5_3:-48900922 Msa0815380:five_prime_UTR
TCTTGACTTGTTAAAATCAA+TGG 0.392539 5_3:-48899879 Msa0815380:CDS
ATAATGGAGAAGAGTAGAAA+TGG 0.394778 5_3:-48902553 Msa0815380:five_prime_UTR
GAGAAGAGTAGAAATGGAAG+TGG 0.395897 5_3:-48902547 Msa0815380:five_prime_UTR
TGTCTTGCTTAACTTTCTCC+TGG 0.405353 5_3:+48898135 None:intergenic
TTCAGTTCCATCATACCATA+TGG 0.406454 5_3:-48901670 Msa0815380:five_prime_UTR
GCTTGTAACCGCATCTTGTT+GGG 0.416012 5_3:+48900935 None:intergenic
GAAAATTATGAACCTGCATC+AGG 0.416436 5_3:-48901608 Msa0815380:five_prime_UTR
TTATTGCTATTACATACATT+AGG 0.420584 5_3:-48901580 Msa0815380:five_prime_UTR
ATATCTACTGTGAGATCAAA+TGG 0.422646 5_3:-48898032 Msa0815380:CDS
TCCAAGAAATATTGTTTACT+AGG 0.427879 5_3:+48900537 None:intergenic
CATGATTCCGTTACAGCTCC+CGG 0.429953 5_3:-48898825 Msa0815380:CDS
GAATCTGATAGAGATGAAAA+TGG 0.430012 5_3:-48901632 Msa0815380:five_prime_UTR
TGATTCACCAGCTTCAAACT+TGG 0.432632 5_3:+48897480 None:intergenic
TATAGTAAGAGCTTTCTTGA+AGG 0.437987 5_3:-48898467 Msa0815380:CDS
TGGTCTGATTATGAGGTTTG+AGG 0.438685 5_3:-48900430 Msa0815380:five_prime_UTR
TGCTGACGAGGACATGAAAC+TGG 0.441494 5_3:-48897762 Msa0815380:CDS
GTTGCTGACTTAAATGTCTC+TGG 0.443060 5_3:+48901848 None:intergenic
CGTTCTGTTGATGGTTTCCA+AGG 0.443849 5_3:-48898077 Msa0815380:CDS
TCACTTGACGATGATACATA+TGG 0.444215 5_3:-48900720 Msa0815380:five_prime_UTR
TGGAAAGAAATGATTGCCTT+CGG 0.444445 5_3:-48899769 Msa0815380:CDS
CTACGCTTTGTGACAAAGGT+TGG 0.445565 5_3:-48909232 Msa0815380:five_prime_UTR
CTTAAATTTGGCTTGACTCA+AGG 0.450996 5_3:+48899850 None:intergenic
GCTCCATGGTCATGATACTT+TGG 0.451138 5_3:+48900014 None:intergenic
TCAAATGGAAGTGGTAATAT+CGG 0.454389 5_3:-48898017 Msa0815380:CDS
GGAACTATGGTCTGATTATG+AGG 0.460379 5_3:-48900437 Msa0815380:five_prime_UTR
AAGAAGTATGTTTGAGAGAC+TGG 0.461971 5_3:-48898618 Msa0815380:CDS
AAGATAAGTAAGGGGAACTA+TGG 0.462535 5_3:-48900450 Msa0815380:five_prime_UTR
ATGAAAGTGGAAAGTTATCC+AGG 0.463937 5_3:-48900660 Msa0815380:five_prime_UTR
AGCTTGTAACCGCATCTTGT+TGG 0.464083 5_3:+48900934 None:intergenic
TAATATCTTCCTCACCGCCT+TGG 0.472392 5_3:+48898060 None:intergenic
TGCACAGTGTTCGTTCGCTA+AGG 0.472809 5_3:-48897455 Msa0815380:CDS
TTGAGAAAATTTGCTCTCTA+GGG 0.475004 5_3:+48900194 None:intergenic
AGGGATATGTGAAGAGAGCA+AGG 0.483369 5_3:-48900057 Msa0815380:CDS
AATCACTAAGCTATACCAAT+TGG 0.484827 5_3:-48900382 Msa0815380:five_prime_UTR
CGGGAGCTGTAACGGAATCA+TGG 0.485294 5_3:+48898826 None:intergenic
TGCTCAAGTTTATGAAATCC+AGG 0.488265 5_3:-48898153 Msa0815380:CDS
ACCAAATGTCTCCTCACCCT+TGG 0.492957 5_3:+48898409 None:intergenic
CGCTTTGTGACAAAGGTTGG+AGG 0.494186 5_3:-48909229 Msa0815380:intron
TCCAAGGGTGAGGAGACATT+TGG 0.494736 5_3:-48898410 Msa0815380:CDS
ATCTTCCAAATGCATGAAGA+TGG 0.494801 5_3:-48901459 Msa0815380:five_prime_UTR
TTCAGGAAGCGAAATTGAGT+TGG 0.494953 5_3:+48899730 None:intergenic
AGTTGTACTCTCCAACCATA+TGG 0.501731 5_3:+48901655 None:intergenic
GCCTTGAACTCAAAGTCAAA+GGG 0.503702 5_3:-48901347 Msa0815380:five_prime_UTR
TACAAGGAAAATATAAGGTA+TGG 0.503727 5_3:-48900106 Msa0815380:CDS
AGCTTTCATCCTTGACAGCT+AGG 0.509422 5_3:+48898489 None:intergenic
AGCTTATTGATGGATGCATT+CGG 0.510495 5_3:+48898555 None:intergenic
GCTTTCATCCTTGACAGCTA+GGG 0.513960 5_3:+48898490 None:intergenic
AGCTTCAAACTTGGGCCCCT+AGG 0.515558 5_3:+48897489 None:intergenic
TGGTGGTCCCCATATCAGTT+TGG 0.515701 5_3:+48900878 None:intergenic
TTTAATCATCTCAGAAATGA+CGG 0.516197 5_3:+48898352 None:intergenic
TCATGCATACAAGATAAGTA+AGG 0.516685 5_3:-48900460 Msa0815380:five_prime_UTR
GTTCCATCATACCATATGGT+TGG 0.518572 5_3:-48901666 Msa0815380:five_prime_UTR
GATTCACCAGCTTCAAACTT+GGG 0.519694 5_3:+48897481 None:intergenic
TCTCCAACCATATGGTATGA+TGG 0.520600 5_3:+48901663 None:intergenic
TCATGCAGTGCTATGCTGAA+TGG 0.523619 5_3:-48900599 Msa0815380:five_prime_UTR
GCAATAAGATCTCCTGATGC+AGG 0.523819 5_3:+48901596 None:intergenic
AAATAATAAGAGAATGAAAG+TGG 0.526470 5_3:-48900673 Msa0815380:five_prime_UTR
AAACTGATATGGGGACCACC+AGG 0.527115 5_3:-48900876 Msa0815380:five_prime_UTR
TATTAATATATCCAAGGGTG+AGG 0.528313 5_3:-48898420 Msa0815380:CDS
ACAAAGAAGAAAGTTAGCAT+TGG 0.535667 5_3:-48898194 Msa0815380:CDS
AGCCTTGAACTCAAAGTCAA+AGG 0.539380 5_3:-48901348 Msa0815380:five_prime_UTR
TTCGGATGCCCTAGCTGTCA+AGG 0.542296 5_3:-48898498 Msa0815380:CDS
AAGCTTAATGCAGCTGCTTG+AGG 0.542347 5_3:-48900218 Msa0815380:exon
GAAAGTTAAGCAAGACACTT+GGG 0.544723 5_3:-48898129 Msa0815380:CDS
TGCAGTATTAGTTGGAGCAC+AGG 0.546178 5_3:+48900785 None:intergenic
GTGGCAGGTCAAGGAAACCT+AGG 0.546870 5_3:-48897506 Msa0815380:intron
ATCTGCATATAGTGCATACA+AGG 0.548269 5_3:-48900122 Msa0815380:CDS
GTTTGAGGATTATGTTCAGA+AGG 0.548737 5_3:-48900415 Msa0815380:five_prime_UTR
TGAAGACCCGGGAGCTGTAA+CGG 0.548874 5_3:+48898818 None:intergenic
AATACTACGCTTTGTGACAA+AGG 0.549299 5_3:-48909236 Msa0815380:five_prime_UTR
CATGCATACAAGATAAGTAA+GGG 0.553040 5_3:-48900459 Msa0815380:five_prime_UTR
CGGACATAGCTTGAAGAACA+TGG 0.553176 5_3:-48898384 Msa0815380:CDS
TGGCAGGTCAAGGAAACCTA+GGG 0.554885 5_3:-48897505 Msa0815380:intron
GAGCTAATGTTGCAATGACA+AGG 0.555800 5_3:-48897974 Msa0815380:CDS
GCACAGTGTTCGTTCGCTAA+GGG 0.557459 5_3:-48897454 Msa0815380:CDS
TAGGGGCCCAAGTTTGAAGC+TGG 0.559189 5_3:-48897487 Msa0815380:CDS
ATATGGGGACCACCAGGGAC+AGG 0.561447 5_3:-48900870 Msa0815380:five_prime_UTR
AGAAGAGTAGAAATGGAAGT+GGG 0.561454 5_3:-48902546 Msa0815380:five_prime_UTR
CTTGATGGTCCAAAGCAAGC+AGG 0.561818 5_3:+48899794 None:intergenic
ATGATTCCGTTACAGCTCCC+GGG 0.561917 5_3:-48898824 Msa0815380:CDS
AGAAAGTTAAGCAAGACACT+TGG 0.566618 5_3:-48898130 Msa0815380:CDS
CTGCTTCACAAATTGCTCCA+TGG 0.567182 5_3:+48900000 None:intergenic
ATGTTGCAATGACAAGGGCT+AGG 0.572309 5_3:-48897968 Msa0815380:intron
TCAATTTCAGACTTCCTCAA+AGG 0.573595 5_3:+48909258 None:intergenic
TATTTGTAGCAAAATCATCA+AGG 0.574237 5_3:+48900155 None:intergenic
ACTGTGAGATCAAATGGAAG+TGG 0.575364 5_3:-48898026 Msa0815380:CDS
TCATCATAGAACTCTTTGCA+AGG 0.575937 5_3:+48898527 None:intergenic
ATTAACATAGGCAATATGGT+AGG 0.576989 5_3:+48901520 None:intergenic
AGAATGCAATGTTGAAGACC+CGG 0.584439 5_3:+48898806 None:intergenic
GAAGCGAAATTGAGTTGGAA+AGG 0.586487 5_3:+48899735 None:intergenic
CGTGTTTCCTCAAACAATAG+AGG 0.588095 5_3:+48901803 None:intergenic
TCTCCAGATAGAATCACTAC+TGG 0.590428 5_3:+48897826 None:intergenic
TTCATTGAGAACATCCTCGA+GGG 0.591146 5_3:+48902495 None:intergenic
CAAGTTGAAATCAAGAACAT+TGG 0.591895 5_3:-48900808 Msa0815380:five_prime_UTR
CTATTTACTATGACAAAGTG+TGG 0.592488 5_3:-48897265 Msa0815380:three_prime_UTR
AGGATTATGTTCAGAAGGCA+CGG 0.592537 5_3:-48900410 Msa0815380:five_prime_UTR
AGAAAGATATCTTCAAGACC+TGG 0.599408 5_3:+48900642 None:intergenic
ATTTAAAGTGAGACATCAAG+TGG 0.599950 5_3:-48899708 Msa0815380:CDS
ATTTGTAGCAAAATCATCAA+GGG 0.604824 5_3:+48900156 None:intergenic
TCTGTTGATGGTTTCCAAGG+CGG 0.607165 5_3:-48898074 Msa0815380:CDS
CTGTTATCATAATGCTGACG+AGG 0.607604 5_3:-48897774 Msa0815380:CDS
TTAACATAGGCAATATGGTA+GGG 0.609308 5_3:+48901521 None:intergenic
GAATGCAATGTTGAAGACCC+GGG 0.613310 5_3:+48898807 None:intergenic
TAATACTGCAGTGTTGCAAG+TGG 0.613483 5_3:-48900772 Msa0815380:five_prime_UTR
CCATATTGCCTATGTTAATG+GGG 0.615680 5_3:-48901516 Msa0815380:five_prime_UTR
TGAAAATCTTTACGAAGACA+AGG 0.616290 5_3:-48902476 Msa0815380:intron
TTTGAGAGACTGGTGATGCT+AGG 0.620623 5_3:-48898608 Msa0815380:CDS
AAAGGAAACTTAGTATCCGA+AGG 0.621936 5_3:+48899753 None:intergenic
GAATGAATCCCAACAAGATG+CGG 0.631351 5_3:-48900943 Msa0815380:five_prime_UTR
CAGTGTTGCAAGTGGCAACA+AGG 0.635731 5_3:-48900764 Msa0815380:five_prime_UTR
ATTGATGCTATACTTCCTCA+AGG 0.637505 5_3:-48897647 Msa0815380:CDS
GGTGAGGAGACATTTGGTCG+CGG 0.639719 5_3:-48898404 Msa0815380:CDS
TGTACTTTCTTGGACCCTCG+AGG 0.647281 5_3:-48902509 Msa0815380:five_prime_UTR
ATACCAAAGTATCATGACCA+TGG 0.651702 5_3:-48900017 Msa0815380:CDS
AGCTAATGTTGCAATGACAA+GGG 0.653965 5_3:-48897973 Msa0815380:CDS
GCTAATACCAAACTGATATG+GGG 0.655141 5_3:-48900885 Msa0815380:five_prime_UTR
TCCAGCGCTAGTCAAAAGCA+AGG 0.658529 5_3:-48898762 Msa0815380:intron
ATGCATACAAGATAAGTAAG+GGG 0.667893 5_3:-48900458 Msa0815380:five_prime_UTR
TGATGGTTTCCAAGGCGGTG+AGG 0.670301 5_3:-48898069 Msa0815380:CDS
AACTGATATGGGGACCACCA+GGG 0.682358 5_3:-48900875 Msa0815380:five_prime_UTR
CATGATATTGTCAATCACAA+CGG 0.683039 5_3:+48897417 None:intergenic
TTTCATTGAGAACATCCTCG+AGG 0.686631 5_3:+48902494 None:intergenic
GGCAGGTCAAGGAAACCTAG+GGG 0.752633 5_3:-48897504 Msa0815380:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATAAATAAATAAAAAA+GGG + chr5_3:48897422-48897441 None:intergenic 0.0%
!! AATAAATAAATAAATAAAAA+AGG + chr5_3:48897423-48897442 None:intergenic 0.0%
!! ATAAAAATTAATAAAATAAT+AGG + chr5_3:48897774-48897793 None:intergenic 0.0%
!! TAATTTAATGTGATTTAATT+TGG + chr5_3:48897853-48897872 None:intergenic 10.0%
!! TACAATAGTTTAATATAAAA+TGG + chr5_3:48898280-48898299 None:intergenic 10.0%
!!! ATAAACTTTTTTTAAGTTTT+CGG - chr5_3:48898524-48898543 Msa0815380:CDS 10.0%
!! TATTAATTTAATAACGAATA+TGG + chr5_3:48898562-48898581 None:intergenic 10.0%
!!! AATTATACAATTTTTTTTGA+AGG - chr5_3:48898583-48898602 Msa0815380:CDS 10.0%
!! TACATGAAATAATATATAAT+TGG - chr5_3:48898628-48898647 Msa0815380:CDS 10.0%
!!! TATTAGTTTTGAATTATTAT+AGG - chr5_3:48898737-48898756 Msa0815380:intron 10.0%
!!! ATTAGTTTTGAATTATTATA+GGG - chr5_3:48898738-48898757 Msa0815380:intron 10.0%
!!! TTTAAAACCAATATTTAATT+TGG + chr5_3:48899061-48899080 None:intergenic 10.0%
!! AATAGTATATATATAAAGTA+AGG + chr5_3:48899144-48899163 None:intergenic 10.0%
!!! ATTTGATTTTTAGAATTTTT+TGG + chr5_3:48899944-48899963 None:intergenic 10.0%
!! TAAAAATCAAATAAAACTAA+TGG - chr5_3:48899952-48899971 Msa0815380:CDS 10.0%
!!! TATTTTATTTAACAAAAATC+GGG + chr5_3:48900165-48900184 None:intergenic 10.0%
!! AATAGTATATATATAAAGTA+AGG + chr5_3:48899144-48899163 None:intergenic 10.0%
!! AATAGTATATATATAAAGTA+AGG + chr5_3:48899144-48899163 None:intergenic 10.0%
!! TGTTATTAAATATTATAAAG+TGG - chr5_3:48900849-48900868 Msa0815380:five_prime_UTR 10.0%
!!! ATATTCTTTTAATAAAATAG+AGG - chr5_3:48901276-48901295 Msa0815380:intron 10.0%
!!! AATGATTTTCATATATTTTT+TGG + chr5_3:48901906-48901925 None:intergenic 10.0%
!!! TATTTTAATTTGTAACAAAA+CGG + chr5_3:48902448-48902467 None:intergenic 10.0%
!! CAAAATTAACTATAAAAAAA+TGG - chr5_3:48902565-48902584 Msa0815380:intron 10.0%
!!! ATAGAAAAATTTATTTTGAT+TGG - chr5_3:48902710-48902729 Msa0815380:intron 10.0%
!!! TAGAAAAATTTATTTTGATT+GGG - chr5_3:48902711-48902730 Msa0815380:intron 10.0%
!! AAAAGTTACAATTTGTAAAT+TGG - chr5_3:48897811-48897830 Msa0815380:CDS 15.0%
!! TAAAAATTAATTAATGATGG+TGG - chr5_3:48898111-48898130 Msa0815380:CDS 15.0%
!! AAAAATTAATTAATGATGGT+GGG - chr5_3:48898112-48898131 Msa0815380:CDS 15.0%
!! TCTTCATTTAGTAAAATAAA+TGG + chr5_3:48898184-48898203 None:intergenic 15.0%
!!! ATTTATTTTACTAAATGAAG+AGG - chr5_3:48898183-48898202 Msa0815380:CDS 15.0%
!! ATTAAACTATTGTATTTATC+CGG - chr5_3:48898286-48898305 Msa0815380:intron 15.0%
!! ATTTATGCCAAATTAAATAT+TGG - chr5_3:48899051-48899070 Msa0815380:intron 15.0%
!! AATTGATTATTTATAGTTGA+AGG - chr5_3:48899176-48899195 Msa0815380:intron 15.0%
!! TTTCTGTTACATAAAATATT+AGG - chr5_3:48899224-48899243 Msa0815380:intron 15.0%
!! ATATTAGGAATTCAATAAAA+AGG - chr5_3:48899239-48899258 Msa0815380:intron 15.0%
!! ACTAGTATATATATAAAGTA+AGG + chr5_3:48899400-48899419 None:intergenic 15.0%
!!! AGTTTTTTGTTGTTTTTAAA+AGG + chr5_3:48899865-48899884 None:intergenic 15.0%
!!! TTTTTATGATTTTATTTGAC+AGG + chr5_3:48899907-48899926 None:intergenic 15.0%
!!! AAAACTAATGGAAATTTTTT+CGG - chr5_3:48899964-48899983 Msa0815380:CDS 15.0%
!!! TGAGTTTGTTTTTATATAAA+AGG - chr5_3:48901465-48901484 Msa0815380:five_prime_UTR 15.0%
!!! GAGTTTGTTTTTATATAAAA+GGG - chr5_3:48901466-48901485 Msa0815380:five_prime_UTR 15.0%
!!! AGTTTGTTTTTATATAAAAG+GGG - chr5_3:48901467-48901486 Msa0815380:five_prime_UTR 15.0%
!!! TTTTTTTATGTATTGTATCT+AGG + chr5_3:48901687-48901706 None:intergenic 15.0%
!! TCTCATTTATAAATTATACA+CGG + chr5_3:48902002-48902021 None:intergenic 15.0%
!!! ATTTTAATTTGTAACAAAAC+GGG + chr5_3:48902447-48902466 None:intergenic 15.0%
!!! AAATCATGATTTTTTTTGTT+TGG - chr5_3:48902511-48902530 Msa0815380:five_prime_UTR 15.0%
!!! GTTTTTAAAAGAGAAAATAT+AGG - chr5_3:48902807-48902826 Msa0815380:intron 15.0%
!!! TTTTAAAAGAGAAAAAATAG+AGG - chr5_3:48903029-48903048 Msa0815380:intron 15.0%
!! TTTAAAAGAGAAAAAATAGA+GGG - chr5_3:48903030-48903049 Msa0815380:intron 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG + chr5_3:48903294-48903313 None:intergenic 15.0%
!! GAAAAAAATTATTATTGCAT+TGG + chr5_3:48903334-48903353 None:intergenic 15.0%
!!! TTTTAAAAGTAGTAATACTT+TGG + chr5_3:48903398-48903417 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr5_3:48903425-48903444 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr5_3:48903424-48903443 Msa0815380:intron 15.0%
!! AAAAAAAAAAACTGTAGAAT+AGG - chr5_3:48903700-48903719 Msa0815380:intron 15.0%
!!! AATCATTATTGAGATTTTAA+CGG + chr5_3:48904191-48904210 None:intergenic 15.0%
!!! ATTTTGTTATGGATAAAAAT+AGG - chr5_3:48906036-48906055 Msa0815380:intron 15.0%
!!! GTTATTATATTTTTAGATTG+CGG - chr5_3:48907879-48907898 Msa0815380:intron 15.0%
!!! TTCTTTTATTAATATATCCA+AGG - chr5_3:48908110-48908129 Msa0815380:intron 15.0%
!!! TCTTTTATTAATATATCCAA+GGG - chr5_3:48908111-48908130 Msa0815380:intron 15.0%
!! TTAAAGATAATTAACACAAA+TGG + chr5_3:48908238-48908257 None:intergenic 15.0%
!!! TTTTGATTTGATTATTTGCA+GGG - chr5_3:48897223-48897242 Msa0815380:three_prime_UTR 20.0%
!! AAAAAAACAAGGATAAGAAT+GGG + chr5_3:48897351-48897370 None:intergenic 20.0%
!! AAAAAAAACAAGGATAAGAA+TGG + chr5_3:48897352-48897371 None:intergenic 20.0%
!!! ACTTTCTAGATTTTACAAAA+TGG - chr5_3:48897555-48897574 Msa0815380:intron 20.0%
!!! ACGACATACAATTTTATTTT+TGG - chr5_3:48897897-48897916 Msa0815380:intron 20.0%
!!! AATATAAAGCATTGAAAAGT+AGG - chr5_3:48897988-48898007 Msa0815380:CDS 20.0%
!! TAAATTTACCTAGAAATCAA+TGG + chr5_3:48898244-48898263 None:intergenic 20.0%
!! AAATAAAATTTATCACGGAT+TGG - chr5_3:48898366-48898385 Msa0815380:CDS 20.0%
!! GCACATACATATAAAATTAA+CGG - chr5_3:48898467-48898486 Msa0815380:CDS 20.0%
!! CACATACATATAAAATTAAC+GGG - chr5_3:48898468-48898487 Msa0815380:CDS 20.0%
!! TCAAACAAAAATCTCTAATT+AGG + chr5_3:48898658-48898677 None:intergenic 20.0%
!! GCTAAGTTTAAATTATATAG+AGG + chr5_3:48898889-48898908 None:intergenic 20.0%
!! AAAAATATTGCAAATAAACG+TGG - chr5_3:48899351-48899370 Msa0815380:intron 20.0%
!! AACTTATTTAATATCTAACC+CGG + chr5_3:48899441-48899460 None:intergenic 20.0%
!!! GCATTTTTAGAAATTTTACA+GGG + chr5_3:48899720-48899739 None:intergenic 20.0%
!! AGAAAATCAGAAAAAATTCA+AGG + chr5_3:48900103-48900122 None:intergenic 20.0%
!!! TTGAATTTTTTCTGATTTTC+TGG - chr5_3:48900102-48900121 Msa0815380:CDS 20.0%
!!! TGAATTTTTTCTGATTTTCT+GGG - chr5_3:48900103-48900122 Msa0815380:CDS 20.0%
!! AAAAATATTGAGAATGAATG+TGG - chr5_3:48900212-48900231 Msa0815380:CDS 20.0%
!! AAAAATATTGAGAATGAATG+TGG - chr5_3:48900212-48900231 Msa0815380:CDS 20.0%
!! AAAAATATTGAGAATGAATG+TGG - chr5_3:48900212-48900231 Msa0815380:CDS 20.0%
!! TAAAATCACAATAATGATAG+CGG - chr5_3:48900905-48900924 Msa0815380:five_prime_UTR 20.0%
!! TCAATGATACATAAAAATCA+CGG + chr5_3:48900946-48900965 None:intergenic 20.0%
!! TGTATCTTCTAAATAATAGT+GGG + chr5_3:48901085-48901104 None:intergenic 20.0%
!! TAAAAGAATATTATCCATTG+CGG + chr5_3:48901267-48901286 None:intergenic 20.0%
!!! GTTTGTTTTTATATAAAAGG+GGG - chr5_3:48901468-48901487 Msa0815380:five_prime_UTR 20.0%
!!! TAAAATGATTTTCTACATTC+AGG - chr5_3:48901494-48901513 Msa0815380:five_prime_UTR 20.0%
!! TATTATATCCTTTCAAAGAA+TGG + chr5_3:48901827-48901846 None:intergenic 20.0%
!!! TGACAAAAAAAAAAAAGCAT+AGG + chr5_3:48902125-48902144 None:intergenic 20.0%
!! TTTAAAAGAGAAAATATAGG+AGG - chr5_3:48902810-48902829 Msa0815380:intron 20.0%
!! AATGACTACTCAAAAAATTA+AGG - chr5_3:48902868-48902887 Msa0815380:intron 20.0%
!! ATGACTACTCAAAAAATTAA+GGG - chr5_3:48902869-48902888 Msa0815380:intron 20.0%
!!! ATTAAGTTAGTGTGTTTTAT+CGG - chr5_3:48902985-48903004 Msa0815380:intron 20.0%
!! ACGTGTTAAAAAATTAAGAA+GGG - chr5_3:48903092-48903111 Msa0815380:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr5_3:48903415-48903434 Msa0815380:intron 20.0%
!! AATGCAATGATTAAAAGAAA+GGG + chr5_3:48903463-48903482 None:intergenic 20.0%
!! AAATGCAATGATTAAAAGAA+AGG + chr5_3:48903464-48903483 None:intergenic 20.0%
!! TAACACTTCTATAAAATTGT+AGG - chr5_3:48903586-48903605 Msa0815380:intron 20.0%
!! AACACTTCTATAAAATTGTA+GGG - chr5_3:48903587-48903606 Msa0815380:intron 20.0%
!! ATACACAATGTAATAGTAAA+TGG + chr5_3:48903914-48903933 None:intergenic 20.0%
!! AATGATTGTTTAGCAAATAA+TGG - chr5_3:48903967-48903986 Msa0815380:intron 20.0%
!! TTATAGATATTGTACTTTCT+TGG - chr5_3:48904017-48904036 Msa0815380:intron 20.0%
!!! ATTTTTTGCAACTACTAAAA+AGG + chr5_3:48904303-48904322 None:intergenic 20.0%
!! CAAAAGCTTCTTAAATTTAT+TGG - chr5_3:48904370-48904389 Msa0815380:intron 20.0%
!! CTAATCATTCAAATGTTATA+AGG + chr5_3:48904608-48904627 None:intergenic 20.0%
!!! TTATTGCTATTACATACATT+AGG - chr5_3:48904956-48904975 Msa0815380:intron 20.0%
!!! TTTCTGTGTATTATTTTTCA+TGG + chr5_3:48905118-48905137 None:intergenic 20.0%
!!! AAACTTTTTCAATAATGTTG+AGG + chr5_3:48905221-48905240 None:intergenic 20.0%
!!! ACCTTTATTTGATATAATAC+TGG - chr5_3:48905294-48905313 Msa0815380:intron 20.0%
!! TCCAGTATTATATCAAATAA+AGG + chr5_3:48905298-48905317 None:intergenic 20.0%
!! TTTCAATTATTATGCAAGTA+TGG - chr5_3:48905398-48905417 Msa0815380:intron 20.0%
!! TATTTAGCTGCAAAAAAAAA+AGG + chr5_3:48905455-48905474 None:intergenic 20.0%
!! AAATAATAAGAGAATGAAAG+TGG - chr5_3:48905863-48905882 Msa0815380:intron 20.0%
!!! TTAACTGAAATGAAAGATTT+TGG + chr5_3:48906622-48906641 None:intergenic 20.0%
!! CTAAAAAAACATCATAATTG+AGG - chr5_3:48907834-48907853 Msa0815380:intron 20.0%
!! GTTCTATGATGAAAAAATTT+CGG - chr5_3:48908020-48908039 Msa0815380:intron 20.0%
!! ATGATTAAAAACCTAAGAAA+AGG - chr5_3:48908198-48908217 Msa0815380:intron 20.0%
!! TACTTAGATGGAAAAAAATA+AGG + chr5_3:48908979-48908998 None:intergenic 20.0%
!!! TTAATTTGCAACATTTTTTG+TGG - chr5_3:48909011-48909030 Msa0815380:intron 20.0%
!! TAGATTACAAAAACAACAAA+AGG + chr5_3:48909241-48909260 None:intergenic 20.0%
!!! CTTTTGATTTGATTATTTGC+AGG - chr5_3:48897222-48897241 Msa0815380:three_prime_UTR 25.0%
! GAAGAAGAAGAAAAAAAACA+AGG + chr5_3:48897362-48897381 None:intergenic 25.0%
! GATTGGTGTATAAAATGAAA+TGG - chr5_3:48897515-48897534 Msa0815380:intron 25.0%
! TGTATAAAATGAAATGGAGT+GGG - chr5_3:48897521-48897540 Msa0815380:intron 25.0%
! AATAAATGGAGTATGCAATT+TGG + chr5_3:48898170-48898189 None:intergenic 25.0%
! TCCGCAAATAAAATTTATCA+CGG - chr5_3:48898361-48898380 Msa0815380:CDS 25.0%
!!! TCCGTGATAAATTTTATTTG+CGG + chr5_3:48898365-48898384 None:intergenic 25.0%
! AAGTTCAAAAACTTCAAATC+AGG + chr5_3:48898698-48898717 None:intergenic 25.0%
!!! ATTTGAAGTTTTTGAACTTC+AGG - chr5_3:48898699-48898718 Msa0815380:intron 25.0%
! CAATTGCAATATCAACATAA+CGG - chr5_3:48898909-48898928 Msa0815380:intron 25.0%
! AATTGCAATATCAACATAAC+GGG - chr5_3:48898910-48898929 Msa0815380:intron 25.0%
! TATCAATTATACGCATATGA+GGG + chr5_3:48899010-48899029 None:intergenic 25.0%
! TTATCAATTATACGCATATG+AGG + chr5_3:48899011-48899030 None:intergenic 25.0%
! AAAAATATTGCGAATAAACG+TGG - chr5_3:48899096-48899115 Msa0815380:intron 25.0%
! ACTTATTTAATATCTAACCC+GGG + chr5_3:48899440-48899459 None:intergenic 25.0%
!!! TACACTTTTTATTCTTGCAT+TGG + chr5_3:48899605-48899624 None:intergenic 25.0%
! AAGTAATAGTCCATGTTTAA+AGG + chr5_3:48899672-48899691 None:intergenic 25.0%
!!! GGCATTTTTAGAAATTTTAC+AGG + chr5_3:48899721-48899740 None:intergenic 25.0%
!!! TGAATCCGAATTTTAAAATC+CGG + chr5_3:48899754-48899773 None:intergenic 25.0%
!! CTATTTCGGATTTTATAATC+CGG - chr5_3:48899780-48899799 Msa0815380:CDS 25.0%
! GATTATACATAAGAATTGTC+CGG + chr5_3:48899802-48899821 None:intergenic 25.0%
!!! GAATTTTTTCTGATTTTCTG+GGG - chr5_3:48900104-48900123 Msa0815380:CDS 25.0%
!! TTTAACAAAAATCGGGTTTT+CGG + chr5_3:48900158-48900177 None:intergenic 25.0%
! AAAATCACAATAATGATAGC+GGG - chr5_3:48900906-48900925 Msa0815380:five_prime_UTR 25.0%
! AATGATACATAAAAATCACG+GGG + chr5_3:48900944-48900963 None:intergenic 25.0%
! CAATGATACATAAAAATCAC+GGG + chr5_3:48900945-48900964 None:intergenic 25.0%
! CTGTATCTTCTAAATAATAG+TGG + chr5_3:48901086-48901105 None:intergenic 25.0%
! AAAAGAATATTATCCATTGC+GGG + chr5_3:48901266-48901285 None:intergenic 25.0%
!! TATGATTTGCACAACAATAT+TGG - chr5_3:48901750-48901769 Msa0815380:five_prime_UTR 25.0%
!! TTTTATAGCCATTCTTTGAA+AGG - chr5_3:48901816-48901835 Msa0815380:five_prime_UTR 25.0%
! CTTATTTGTGATCATTCAAT+TGG - chr5_3:48902049-48902068 Msa0815380:intron 25.0%
! ACCAATACTTAAAAAAACAC+GGG + chr5_3:48902193-48902212 None:intergenic 25.0%
!!! CCTAATTTCTTTTAAAGAGA+TGG + chr5_3:48902423-48902442 None:intergenic 25.0%
!! CCATCTCTTTAAAAGAAATT+AGG - chr5_3:48902420-48902439 Msa0815380:intron 25.0%
! TGACTACTCAAAAAATTAAG+GGG - chr5_3:48902870-48902889 Msa0815380:intron 25.0%
! GTTGAAACAAAAGACATAAA+AGG - chr5_3:48903055-48903074 Msa0815380:intron 25.0%
! GACGTGTTAAAAAATTAAGA+AGG - chr5_3:48903091-48903110 Msa0815380:intron 25.0%
! CGTGTTAAAAAATTAAGAAG+GGG - chr5_3:48903093-48903112 Msa0815380:intron 25.0%
! AATGATTAAAAGAAAGGGAA+TGG + chr5_3:48903458-48903477 None:intergenic 25.0%
! TTCCTAATAGCGATAATAAT+AGG - chr5_3:48903624-48903643 Msa0815380:intron 25.0%
! TTCCTATTATTATCGCTATT+AGG + chr5_3:48903629-48903648 None:intergenic 25.0%
! ATAGGAATATGAAAAAACAC+TGG - chr5_3:48903642-48903661 Msa0815380:intron 25.0%
! GTTAATGCATGAAAATGAAA+AGG - chr5_3:48903664-48903683 Msa0815380:intron 25.0%
!!! AGCTTTTGAGTAAATATGAT+GGG + chr5_3:48904358-48904377 None:intergenic 25.0%
!!! AAGCTTTTGAGTAAATATGA+TGG + chr5_3:48904359-48904378 None:intergenic 25.0%
! AAAGTTTAGATATGCTTTCT+GGG + chr5_3:48904564-48904583 None:intergenic 25.0%
! AAAAGTTTAGATATGCTTTC+TGG + chr5_3:48904565-48904584 None:intergenic 25.0%
! ATCATTCAAATGTTATAAGG+TGG + chr5_3:48904605-48904624 None:intergenic 25.0%
!! TTTTATTCCTCTATTGTTTG+AGG - chr5_3:48904726-48904745 Msa0815380:intron 25.0%
!! TTCAAGTCATTTAAGCTTTT+TGG + chr5_3:48904982-48905001 None:intergenic 25.0%
!!! ATTTTTTACCCCATTAACAT+AGG + chr5_3:48905031-48905050 None:intergenic 25.0%
!! GGGGTAAAAAATATATTTTC+TGG - chr5_3:48905039-48905058 Msa0815380:intron 25.0%
! GTAATTCTTACATTGAGATT+AGG + chr5_3:48905249-48905268 None:intergenic 25.0%
! ATTTCTCAATGCATACTTTA+TGG - chr5_3:48905320-48905339 Msa0815380:intron 25.0%
! TCCTAGTAAACAATATTTCT+TGG - chr5_3:48905998-48906017 Msa0815380:intron 25.0%
! TCCAAGAAATATTGTTTACT+AGG + chr5_3:48906002-48906021 None:intergenic 25.0%
!! ATCCATAACAAAATCCTTTT+TGG + chr5_3:48906030-48906049 None:intergenic 25.0%
! ATTTGTAGCAAAATCATCAA+GGG + chr5_3:48906383-48906402 None:intergenic 25.0%
! TATTTGTAGCAAAATCATCA+AGG + chr5_3:48906384-48906403 None:intergenic 25.0%
! TACAAGGAAAATATAAGGTA+TGG - chr5_3:48906430-48906449 Msa0815380:intron 25.0%
!!! TCTTGACTTGTTAAAATCAA+TGG - chr5_3:48906657-48906676 Msa0815380:intron 25.0%
!! ATCAACAGTTTGCTTAAATT+TGG + chr5_3:48906701-48906720 None:intergenic 25.0%
! TCAATCACTAAAAATTTCAC+TGG + chr5_3:48906934-48906953 None:intergenic 25.0%
!! TTAGTGACATTCATTAGTTT+GGG + chr5_3:48907505-48907524 None:intergenic 25.0%
!! TTGACTTTTAACAAGATTTG+TGG - chr5_3:48907529-48907548 Msa0815380:intron 25.0%
!!! AAGGTTTTAAATAACGGTAA+CGG + chr5_3:48907660-48907679 None:intergenic 25.0%
!!! CTTCACAAGGTTTTAAATAA+CGG + chr5_3:48907666-48907685 None:intergenic 25.0%
! TTTAATCATCTCAGAAATGA+CGG + chr5_3:48908187-48908206 None:intergenic 25.0%
!! AGAAAAAACAACCTTTTCTT+AGG + chr5_3:48908212-48908231 None:intergenic 25.0%
!!! ACTTTACTTTGTTATGCTTT+TGG - chr5_3:48908305-48908324 Msa0815380:intron 25.0%
! TCATAAACTTGAGCATTATA+TGG + chr5_3:48908378-48908397 None:intergenic 25.0%
! AGATATTGTCTTTGGATATT+AGG - chr5_3:48908670-48908689 Msa0815380:intron 25.0%
!! GGAGTAATTATGTTTGAAAT+AGG + chr5_3:48909220-48909239 None:intergenic 25.0%
TTCAAGCTAACTGAACTTTA+AGG - chr5_3:48897484-48897503 Msa0815380:CDS 30.0%
!! ACTGAACTTTAAGGTATGTT+TGG - chr5_3:48897493-48897512 Msa0815380:CDS 30.0%
!! ACTTTAAGGTATGTTTGGAT+TGG - chr5_3:48897498-48897517 Msa0815380:CDS 30.0%
GTGTATAAAATGAAATGGAG+TGG - chr5_3:48897520-48897539 Msa0815380:intron 30.0%
CAAAACTAATCAAAACCACT+CGG - chr5_3:48897939-48897958 Msa0815380:intron 30.0%
! AGCATTGAAAAGTAGGAATA+TGG - chr5_3:48897995-48898014 Msa0815380:CDS 30.0%
GCATTGAAAAGTAGGAATAT+GGG - chr5_3:48897996-48898015 Msa0815380:CDS 30.0%
GAAATAGAGAGAATGACAAA+TGG + chr5_3:48898049-48898068 None:intergenic 30.0%
! TTCTCTCTATTTCTTCCATT+TGG - chr5_3:48898056-48898075 Msa0815380:CDS 30.0%
TAGACACATAAAACAGATAG+TGG + chr5_3:48898140-48898159 None:intergenic 30.0%
!!! TTTTCCAACCCTATTTTTGT+GGG + chr5_3:48898216-48898235 None:intergenic 30.0%
!!! TTTTTCCAACCCTATTTTTG+TGG + chr5_3:48898217-48898236 None:intergenic 30.0%
!! AAAAGCAACCATTGATTTCT+AGG - chr5_3:48898233-48898252 Msa0815380:intron 30.0%
CGTTATGTTGATATTGCAAT+TGG + chr5_3:48898911-48898930 None:intergenic 30.0%
ATCAATTATACGCATATGAG+GGG + chr5_3:48899009-48899028 None:intergenic 30.0%
! TATATACTAGTTTAGAGACC+CGG - chr5_3:48899409-48899428 Msa0815380:intron 30.0%
CAATAATGAATTAGTCCAAG+TGG - chr5_3:48899632-48899651 Msa0815380:CDS 30.0%
!!! GCATTCCGGATTTTAAAATT+CGG - chr5_3:48899746-48899765 Msa0815380:CDS 30.0%
CGGATTCATGTTTACTATTT+CGG - chr5_3:48899766-48899785 Msa0815380:CDS 30.0%
! GATGGAATTTTGGATTTTGA+GGG - chr5_3:48900037-48900056 Msa0815380:CDS 30.0%
! ATGGAATTTTGGATTTTGAG+GGG - chr5_3:48900038-48900057 Msa0815380:CDS 30.0%
! TTAACAAAAATCGGGTTTTC+GGG + chr5_3:48900157-48900176 None:intergenic 30.0%
! AAATCACAATAATGATAGCG+GGG - chr5_3:48900907-48900926 Msa0815380:five_prime_UTR 30.0%
TTAGAAGATACAGTTAGTCA+AGG - chr5_3:48901093-48901112 Msa0815380:intron 30.0%
AAAGAATATTATCCATTGCG+GGG + chr5_3:48901265-48901284 None:intergenic 30.0%
! TTTTCCCCGATTTCAAAATA+CGG + chr5_3:48901579-48901598 None:intergenic 30.0%
AAAAGCAGTCAAATTGAGTT+TGG - chr5_3:48901622-48901641 Msa0815380:five_prime_UTR 30.0%
TTGTTGTGCAAATCATACAT+GGG + chr5_3:48901747-48901766 None:intergenic 30.0%
ATTGTTGTGCAAATCATACA+TGG + chr5_3:48901748-48901767 None:intergenic 30.0%
!!! TCCCGTGTTTTTTTAAGTAT+TGG - chr5_3:48902189-48902208 Msa0815380:intron 30.0%
AAAAGAGAAAATATAGGAGG+AGG - chr5_3:48902813-48902832 Msa0815380:intron 30.0%
! AAGGGGTAAGATTGTATTTT+TGG - chr5_3:48902887-48902906 Msa0815380:intron 30.0%
AAAAGAGAAAAAATAGAGGG+AGG - chr5_3:48903033-48903052 Msa0815380:intron 30.0%
! AAGGGGTAAGATTGTATTTT+TGG - chr5_3:48902887-48902906 Msa0815380:intron 30.0%
ATTGCATTGGAAACTGAAAA+TGG + chr5_3:48903321-48903340 None:intergenic 30.0%
! TATTAATTGGAGGGTACAAT+TGG + chr5_3:48903360-48903379 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr5_3:48903506-48903525 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr5_3:48903507-48903526 Msa0815380:intron 30.0%
! TCTTTTCATGTGTACTTGAA+AGG - chr5_3:48903839-48903858 Msa0815380:intron 30.0%
AAACAGTTGAAGTATATGTC+CGG + chr5_3:48903870-48903889 None:intergenic 30.0%
AAATGGAACCACAAATGTTA+AGG + chr5_3:48903897-48903916 None:intergenic 30.0%
! ATAATGGAGAAGAGTAGAAA+TGG - chr5_3:48903983-48904002 Msa0815380:intron 30.0%
TGAAAATCTTTACGAAGACA+AGG - chr5_3:48904060-48904079 Msa0815380:intron 30.0%
TCACATTGAAAAAGTGAACT+TGG - chr5_3:48904107-48904126 Msa0815380:intron 30.0%
GAACAAAACTAACAATGAAG+TGG + chr5_3:48904235-48904254 None:intergenic 30.0%
AAGCCTGAAAAAAGATTGAT+CGG + chr5_3:48904470-48904489 None:intergenic 30.0%
GAAATTATTGTCGCTCTATT+GGG + chr5_3:48904507-48904526 None:intergenic 30.0%
TGAAATTATTGTCGCTCTAT+TGG + chr5_3:48904508-48904527 None:intergenic 30.0%
ATAGAGCGACAATAATTTCA+AGG - chr5_3:48904508-48904527 Msa0815380:intron 30.0%
! TGTGAAAATTGTTTTCTCTC+AGG - chr5_3:48904654-48904673 Msa0815380:intron 30.0%
GAATCTGATAGAGATGAAAA+TGG - chr5_3:48904904-48904923 Msa0815380:intron 30.0%
TTAACATAGGCAATATGGTA+GGG + chr5_3:48905018-48905037 None:intergenic 30.0%
ATTAACATAGGCAATATGGT+AGG + chr5_3:48905019-48905038 None:intergenic 30.0%
TACCATATTGCCTATGTTAA+TGG - chr5_3:48905018-48905037 Msa0815380:intron 30.0%
ACCATATTGCCTATGTTAAT+GGG - chr5_3:48905019-48905038 Msa0815380:intron 30.0%
TGACAACAAATGTTCGTATT+TGG - chr5_3:48905163-48905182 Msa0815380:intron 30.0%
CTGAAATACAAGCATTATAC+AGG + chr5_3:48905487-48905506 None:intergenic 30.0%
ATAATGCTTGTATTTCAGAG+TGG - chr5_3:48905489-48905508 Msa0815380:intron 30.0%
ATGCTAATACCAAACTGATA+TGG - chr5_3:48905649-48905668 Msa0815380:intron 30.0%
TGCTAATACCAAACTGATAT+GGG - chr5_3:48905650-48905669 Msa0815380:intron 30.0%
! CAAGTTGAAATCAAGAACAT+TGG - chr5_3:48905728-48905747 Msa0815380:intron 30.0%
! TTAAGTGACATTGTGCTATT+TGG - chr5_3:48905840-48905859 Msa0815380:intron 30.0%
! GTCCAAAAAGGATTTTGTTA+TGG - chr5_3:48906025-48906044 Msa0815380:intron 30.0%
TCATGCATACAAGATAAGTA+AGG - chr5_3:48906076-48906095 Msa0815380:intron 30.0%
CATGCATACAAGATAAGTAA+GGG - chr5_3:48906077-48906096 Msa0815380:intron 30.0%
ATGCATACAAGATAAGTAAG+GGG - chr5_3:48906078-48906097 Msa0815380:intron 30.0%
AATCACTAAGCTATACCAAT+TGG - chr5_3:48906154-48906173 Msa0815380:intron 30.0%
! TTTTGTCATTCTCAACCAAT+TGG + chr5_3:48906172-48906191 None:intergenic 30.0%
! TTGAGAAAATTTGCTCTCTA+GGG + chr5_3:48906345-48906364 None:intergenic 30.0%
! TTTGAGAAAATTTGCTCTCT+AGG + chr5_3:48906346-48906365 None:intergenic 30.0%
! AGAGCAAATTTTCTCAAAGA+TGG - chr5_3:48906348-48906367 Msa0815380:intron 30.0%
! GAGCAAATTTTCTCAAAGAT+GGG - chr5_3:48906349-48906368 Msa0815380:intron 30.0%
GTGCATACAAGGAAAATATA+AGG - chr5_3:48906425-48906444 Msa0815380:intron 30.0%
!! TGATGATTCTTTGACTTTTG+AGG - chr5_3:48906459-48906478 Msa0815380:intron 30.0%
!! GATGATTCTTTGACTTTTGA+GGG - chr5_3:48906460-48906479 Msa0815380:intron 30.0%
!! AATGAAAGATTTTGGCATGT+GGG + chr5_3:48906614-48906633 None:intergenic 30.0%
!! AAATGAAAGATTTTGGCATG+TGG + chr5_3:48906615-48906634 None:intergenic 30.0%
!! ATTTTAACAAGTCAAGAGCT+TGG + chr5_3:48906654-48906673 None:intergenic 30.0%
TCATTTCTTTCCAAACTTGA+TGG + chr5_3:48906760-48906779 None:intergenic 30.0%
TGATGTCTCACTTTAAATTC+AGG + chr5_3:48906826-48906845 None:intergenic 30.0%
! ATTTAAAGTGAGACATCAAG+TGG - chr5_3:48906828-48906847 Msa0815380:intron 30.0%
! TTTTCTTCTCAGCGTTAAAA+CGG + chr5_3:48907044-48907063 None:intergenic 30.0%
! AGATGAGATGAGATTTTAGA+GGG - chr5_3:48907295-48907314 Msa0815380:intron 30.0%
!! AGATTTTAGAGGGGAAAAAA+TGG - chr5_3:48907305-48907324 Msa0815380:intron 30.0%
!! GATTTTAGAGGGGAAAAAAT+GGG - chr5_3:48907306-48907325 Msa0815380:intron 30.0%
GTTAGTGACATTCATTAGTT+TGG + chr5_3:48907506-48907525 None:intergenic 30.0%
CTTCAACATTGCATTCTTAT+AGG - chr5_3:48907736-48907755 Msa0815380:intron 30.0%
TATAGTAAGAGCTTTCTTGA+AGG - chr5_3:48908069-48908088 Msa0815380:intron 30.0%
TATTAATATATCCAAGGGTG+AGG - chr5_3:48908116-48908135 Msa0815380:intron 30.0%
ACAAAGAAGAAAGTTAGCAT+TGG - chr5_3:48908342-48908361 Msa0815380:intron 30.0%
ATATCTACTGTGAGATCAAA+TGG - chr5_3:48908504-48908523 Msa0815380:intron 30.0%
TCAAATGGAAGTGGTAATAT+CGG - chr5_3:48908519-48908538 Msa0815380:intron 30.0%
TGTATTTGCAGATTCAAAGT+TGG - chr5_3:48908621-48908640 Msa0815380:intron 30.0%
! TTTTGTGCAGATATTGTCTT+TGG - chr5_3:48908662-48908681 Msa0815380:intron 30.0%
!! TGTAGTTTTTGATTACCTTG+AGG + chr5_3:48908907-48908926 None:intergenic 30.0%
TCCATCTAAGTACTTTGATT+TGG - chr5_3:48908987-48909006 Msa0815380:intron 30.0%
! CCATCTAAGTACTTTGATTT+GGG - chr5_3:48908988-48909007 Msa0815380:intron 30.0%
CATGATATTGTCAATCACAA+CGG + chr5_3:48909122-48909141 None:intergenic 30.0%
CTATTTACTATGACAAAGTG+TGG - chr5_3:48909271-48909290 Msa0815380:five_prime_UTR 30.0%
CTAACAATTGTTCTCCTTTG+AGG - chr5_3:48897264-48897283 Msa0815380:three_prime_UTR 35.0%
TCAATTTCAGACTTCCTCAA+AGG + chr5_3:48897281-48897300 None:intergenic 35.0%
AATACTACGCTTTGTGACAA+AGG - chr5_3:48897300-48897319 Msa0815380:three_prime_UTR 35.0%
TGTGTCTTTATCTCTCCAAA+TGG + chr5_3:48898074-48898093 None:intergenic 35.0%
GATCCTTACCCACAAAAATA+GGG - chr5_3:48898205-48898224 Msa0815380:CDS 35.0%
TTCTTGAATATGTCTAACCC+GGG + chr5_3:48898317-48898336 None:intergenic 35.0%
CTTCTTGAATATGTCTAACC+CGG + chr5_3:48898318-48898337 None:intergenic 35.0%
! AGTCCAAGTGGTAATAGTTT+TGG - chr5_3:48899644-48899663 Msa0815380:CDS 35.0%
! GTCCAAGTGGTAATAGTTTT+GGG - chr5_3:48899645-48899664 Msa0815380:CDS 35.0%
!!! AGTTTTGGGTCCTTTAAACA+TGG - chr5_3:48899659-48899678 Msa0815380:CDS 35.0%
! TTTAGAAATTTTACAGGGCG+CGG + chr5_3:48899715-48899734 None:intergenic 35.0%
TTAAAATCCGGAATGCACAA+GGG + chr5_3:48899742-48899761 None:intergenic 35.0%
! TTTAAAATCCGGAATGCACA+AGG + chr5_3:48899743-48899762 None:intergenic 35.0%
TGAAAAATGGGTCTAAACGA+TGG - chr5_3:48900019-48900038 Msa0815380:CDS 35.0%
! CGATGGAATTTTGGATTTTG+AGG - chr5_3:48900036-48900055 Msa0815380:CDS 35.0%
GACGCATAAATCACGATTTA+AGG + chr5_3:48900740-48900759 None:intergenic 35.0%
ATACAGTTAGTCAAGGCAAT+GGG - chr5_3:48901100-48901119 Msa0815380:intron 35.0%
TTCTTATCCCCATTGGATAT+GGG + chr5_3:48901194-48901213 None:intergenic 35.0%
TTTCTTATCCCCATTGGATA+TGG + chr5_3:48901195-48901214 None:intergenic 35.0%
ATTCGATTTCTTATCCCCAT+TGG + chr5_3:48901201-48901220 None:intergenic 35.0%
TGTGTGACTGAAATGAGTTA+TGG - chr5_3:48901440-48901459 Msa0815380:five_prime_UTR 35.0%
TTCTACATTCAGGACAAGTT+TGG - chr5_3:48901504-48901523 Msa0815380:five_prime_UTR 35.0%
TCTACATTCAGGACAAGTTT+GGG - chr5_3:48901505-48901524 Msa0815380:five_prime_UTR 35.0%
TTTCCCCGATTTCAAAATAC+GGG + chr5_3:48901578-48901597 None:intergenic 35.0%
CAGTCAAATTGAGTTTGGTT+CGG - chr5_3:48901627-48901646 Msa0815380:five_prime_UTR 35.0%
GTTGAAGCAAAAGACACAAA+AGG - chr5_3:48902835-48902854 Msa0815380:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr5_3:48903268-48903287 None:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + chr5_3:48903369-48903388 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG + chr5_3:48903373-48903392 None:intergenic 35.0%
GGACATATACTTCAACTGTT+TGG - chr5_3:48903869-48903888 Msa0815380:intron 35.0%
GTTTGGTACCTTAACATTTG+TGG - chr5_3:48903886-48903905 Msa0815380:intron 35.0%
AGAAGAGTAGAAATGGAAGT+GGG - chr5_3:48903990-48904009 Msa0815380:intron 35.0%
TCCTGATATGTTTGTGTGAT+CGG + chr5_3:48904406-48904425 None:intergenic 35.0%
!!! CTTCCGATCAATCTTTTTTC+AGG - chr5_3:48904464-48904483 Msa0815380:intron 35.0%
GATTTATCTTCAAGCTTGTC+TGG - chr5_3:48904760-48904779 Msa0815380:intron 35.0%
TTCAGTTCCATCATACCATA+TGG - chr5_3:48904866-48904885 Msa0815380:intron 35.0%
GAAAATTATGAACCTGCATC+AGG - chr5_3:48904928-48904947 Msa0815380:intron 35.0%
CCATATTGCCTATGTTAATG+GGG - chr5_3:48905020-48905039 Msa0815380:intron 35.0%
ATCTTCCAAATGCATGAAGA+TGG - chr5_3:48905077-48905096 Msa0815380:intron 35.0%
AACATCCATCTTCATGCATT+TGG + chr5_3:48905085-48905104 None:intergenic 35.0%
GCTAATACCAAACTGATATG+GGG - chr5_3:48905651-48905670 Msa0815380:intron 35.0%
TCACTTGACGATGATACATA+TGG - chr5_3:48905816-48905835 Msa0815380:intron 35.0%
ATGAAAGTGGAAAGTTATCC+AGG - chr5_3:48905876-48905895 Msa0815380:intron 35.0%
AGAAAGATATCTTCAAGACC+TGG + chr5_3:48905897-48905916 None:intergenic 35.0%
TTTCTTGGAGATGTCCAAAA+AGG - chr5_3:48906013-48906032 Msa0815380:intron 35.0%
AAGATAAGTAAGGGGAACTA+TGG - chr5_3:48906086-48906105 Msa0815380:intron 35.0%
GTTTGAGGATTATGTTCAGA+AGG - chr5_3:48906121-48906140 Msa0815380:intron 35.0%
ATCTGCATATAGTGCATACA+AGG - chr5_3:48906414-48906433 Msa0815380:intron 35.0%
! ATACCAAAGTATCATGACCA+TGG - chr5_3:48906519-48906538 Msa0815380:intron 35.0%
CAATTTGTGAAGCAGAGATT+TGG - chr5_3:48906544-48906563 Msa0815380:intron 35.0%
!! CTTAAATTTGGCTTGACTCA+AGG + chr5_3:48906689-48906708 None:intergenic 35.0%
TGGAAAGAAATGATTGCCTT+CGG - chr5_3:48906767-48906786 Msa0815380:intron 35.0%
AAAGGAAACTTAGTATCCGA+AGG + chr5_3:48906786-48906805 None:intergenic 35.0%
! ATCAAGTGGAAAAGTTTTGC+TGG - chr5_3:48906842-48906861 Msa0815380:intron 35.0%
!!! AGCAGCAAGGTTTTAAATAC+AGG - chr5_3:48906957-48906976 Msa0815380:intron 35.0%
AAAACGGCAAATAACGGTAA+CGG + chr5_3:48907028-48907047 None:intergenic 35.0%
AGCGTTAAAACGGCAAATAA+CGG + chr5_3:48907034-48907053 None:intergenic 35.0%
AACTATGTTTCGCGTTGTAA+CGG + chr5_3:48907141-48907160 None:intergenic 35.0%
TACAACGCGAAACATAGTTA+CGG - chr5_3:48907142-48907161 Msa0815380:intron 35.0%
TTGCACTCTCACTCTTAATT+TGG - chr5_3:48907247-48907266 Msa0815380:intron 35.0%
TGCACTCTCACTCTTAATTT+GGG - chr5_3:48907248-48907267 Msa0815380:intron 35.0%
! GAGATGAGATGAGATTTTAG+AGG - chr5_3:48907294-48907313 Msa0815380:intron 35.0%
!! GATGAGATGAGATTTTAGAG+GGG - chr5_3:48907296-48907315 Msa0815380:intron 35.0%
AGTTGATTGTGTCTTTGTGT+GGG - chr5_3:48907340-48907359 Msa0815380:intron 35.0%
! TTAAATAACGGTAACGGTTG+CGG + chr5_3:48907654-48907673 None:intergenic 35.0%
! AAGAAGTATGTTTGAGAGAC+TGG - chr5_3:48907918-48907937 Msa0815380:intron 35.0%
! AGCTTATTGATGGATGCATT+CGG + chr5_3:48907984-48908003 None:intergenic 35.0%
CAAGGAAACAAGCTTATTGA+TGG + chr5_3:48907994-48908013 None:intergenic 35.0%
TCATCATAGAACTCTTTGCA+AGG + chr5_3:48908012-48908031 None:intergenic 35.0%
! TGCTTTTGGTAGAGTTTATG+AGG - chr5_3:48908319-48908338 Msa0815380:intron 35.0%
TGCTCAAGTTTATGAAATCC+AGG - chr5_3:48908383-48908402 Msa0815380:intron 35.0%
AGAAAGTTAAGCAAGACACT+TGG - chr5_3:48908406-48908425 Msa0815380:intron 35.0%
GAAAGTTAAGCAAGACACTT+GGG - chr5_3:48908407-48908426 Msa0815380:intron 35.0%
GTTAATGTTCGTTCTGTTGA+TGG - chr5_3:48908450-48908469 Msa0815380:intron 35.0%
AGCTAATGTTGCAATGACAA+GGG - chr5_3:48908563-48908582 Msa0815380:intron 35.0%
ATTGATGCTATACTTCCTCA+AGG - chr5_3:48908889-48908908 Msa0815380:intron 35.0%
! CCCAAATCAAAGTACTTAGA+TGG + chr5_3:48908991-48909010 None:intergenic 35.0%
!!! TTTGCAACATTTTTTGTGGC+AGG - chr5_3:48909015-48909034 Msa0815380:intron 35.0%
TGATTACTCCTAACAAGGTG+AGG - chr5_3:48897962-48897981 Msa0815380:intron 40.0%
GATTACTCCTAACAAGGTGA+GGG - chr5_3:48897963-48897982 Msa0815380:intron 40.0%
ATATTCTCCCTCACCTTGTT+AGG + chr5_3:48897973-48897992 None:intergenic 40.0%
AGAGAGAATGACAAATGGAG+AGG + chr5_3:48898044-48898063 None:intergenic 40.0%
GGATCCTTACCCACAAAAAT+AGG - chr5_3:48898204-48898223 Msa0815380:CDS 40.0%
!!! CAACCCTATTTTTGTGGGTA+AGG + chr5_3:48898211-48898230 None:intergenic 40.0%
CTTACCCACAAAAATAGGGT+TGG - chr5_3:48898209-48898228 Msa0815380:intron 40.0%
ATAAACGTGGAAGTGACATG+TGG - chr5_3:48899364-48899383 Msa0815380:intron 40.0%
GACCCAAAACTATTACCACT+TGG + chr5_3:48899650-48899669 None:intergenic 40.0%
! TTAGAAATTTTACAGGGCGC+GGG + chr5_3:48899714-48899733 None:intergenic 40.0%
AAAAATGCCCTTGTGCATTC+CGG - chr5_3:48899732-48899751 Msa0815380:CDS 40.0%
TGAAATGTGAGAGAGTCTGA+TGG + chr5_3:48899827-48899846 None:intergenic 40.0%
! GGGTCTAAACGATGGAATTT+TGG - chr5_3:48900027-48900046 Msa0815380:CDS 40.0%
!! GAATTTTGGATTTTGAGGGG+CGG - chr5_3:48900041-48900060 Msa0815380:CDS 40.0%
!! CTGATTTTCTGGGGATGTTT+CGG - chr5_3:48900113-48900132 Msa0815380:CDS 40.0%
ATGAATGTGGAAGTGACATG+TGG - chr5_3:48900225-48900244 Msa0815380:exon 40.0%
ATGAATGTGGAAGTGACATG+TGG - chr5_3:48900225-48900244 Msa0815380:exon 40.0%
ATGAATGTGGAAGTGACATG+TGG - chr5_3:48900225-48900244 Msa0815380:exon 40.0%
GATACAGTTAGTCAAGGCAA+TGG - chr5_3:48901099-48901118 Msa0815380:intron 40.0%
TACAGTTAGTCAAGGCAATG+GGG - chr5_3:48901101-48901120 Msa0815380:intron 40.0%
AATCTTATCTCCGTCTCCAA+CGG - chr5_3:48901218-48901237 Msa0815380:intron 40.0%
ATATTATCCATTGCGGGGAT+GGG + chr5_3:48901260-48901279 None:intergenic 40.0%
AATATTATCCATTGCGGGGA+TGG + chr5_3:48901261-48901280 None:intergenic 40.0%
TAGTCGATAGATCATGGCTA+TGG - chr5_3:48901357-48901376 Msa0815380:five_prime_UTR 40.0%
ATAGATCATGGCTATGGTGA+TGG - chr5_3:48901363-48901382 Msa0815380:five_prime_UTR 40.0%
ACAAGTTTGGGTATGAGTTC+AGG - chr5_3:48901517-48901536 Msa0815380:five_prime_UTR 40.0%
CAAGTTTGGGTATGAGTTCA+GGG - chr5_3:48901518-48901537 Msa0815380:five_prime_UTR 40.0%
CGATTTCAAAATACGGGTAC+GGG + chr5_3:48901572-48901591 None:intergenic 40.0%
CCGATTTCAAAATACGGGTA+CGG + chr5_3:48901573-48901592 None:intergenic 40.0%
!!! CCGTACCCGTATTTTGAAAT+CGG - chr5_3:48901570-48901589 Msa0815380:five_prime_UTR 40.0%
!!! CGTACCCGTATTTTGAAATC+GGG - chr5_3:48901571-48901590 Msa0815380:five_prime_UTR 40.0%
!!! GTACCCGTATTTTGAAATCG+GGG - chr5_3:48901572-48901591 Msa0815380:five_prime_UTR 40.0%
AAACTCAAACCGAGTCAAAG+TGG - chr5_3:48901596-48901615 Msa0815380:five_prime_UTR 40.0%
AACTCAAACCGAGTCAAAGT+GGG - chr5_3:48901597-48901616 Msa0815380:five_prime_UTR 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr5_3:48903511-48903530 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + chr5_3:48903370-48903389 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr5_3:48903511-48903530 Msa0815380:intron 40.0%
!! TGAGAAGAGGGTACTTTCAT+AGG + chr5_3:48903757-48903776 None:intergenic 40.0%
GAGAAGAGTAGAAATGGAAG+TGG - chr5_3:48903989-48904008 Msa0815380:intron 40.0%
TTCATTGAGAACATCCTCGA+GGG + chr5_3:48904044-48904063 None:intergenic 40.0%
TTTCATTGAGAACATCCTCG+AGG + chr5_3:48904045-48904064 None:intergenic 40.0%
ACCGATCACACAAACATATC+AGG - chr5_3:48904402-48904421 Msa0815380:intron 40.0%
!!! TTTTTCAGGCTTTAGCAACC+TGG - chr5_3:48904478-48904497 Msa0815380:intron 40.0%
!! TTTTCAGGCTTTAGCAACCT+GGG - chr5_3:48904479-48904498 Msa0815380:intron 40.0%
!! GTTGCTGACTTAAATGTCTC+TGG + chr5_3:48904691-48904710 None:intergenic 40.0%
CGTGTTTCCTCAAACAATAG+AGG + chr5_3:48904736-48904755 None:intergenic 40.0%
GTTCCATCATACCATATGGT+TGG - chr5_3:48904870-48904889 Msa0815380:intron 40.0%
TCTCCAACCATATGGTATGA+TGG + chr5_3:48904876-48904895 None:intergenic 40.0%
AGTTGTACTCTCCAACCATA+TGG + chr5_3:48904884-48904903 None:intergenic 40.0%
CCCCATTAACATAGGCAATA+TGG + chr5_3:48905023-48905042 None:intergenic 40.0%
AGCCTTGAACTCAAAGTCAA+AGG - chr5_3:48905188-48905207 Msa0815380:intron 40.0%
GCCTTGAACTCAAAGTCAAA+GGG - chr5_3:48905189-48905208 Msa0815380:intron 40.0%
! ACCCTTTGACTTTGAGTTCA+AGG + chr5_3:48905193-48905212 None:intergenic 40.0%
GAATGAATCCCAACAAGATG+CGG - chr5_3:48905593-48905612 Msa0815380:intron 40.0%
TGCAACACTGCAGTATTAGT+TGG + chr5_3:48905762-48905781 None:intergenic 40.0%
TAATACTGCAGTGTTGCAAG+TGG - chr5_3:48905764-48905783 Msa0815380:intron 40.0%
GGAACTATGGTCTGATTATG+AGG - chr5_3:48906099-48906118 Msa0815380:intron 40.0%
TGGTCTGATTATGAGGTTTG+AGG - chr5_3:48906106-48906125 Msa0815380:intron 40.0%
AGGATTATGTTCAGAAGGCA+CGG - chr5_3:48906126-48906145 Msa0815380:intron 40.0%
! TTGCTTTGGACCATCAAGTT+TGG - chr5_3:48906747-48906766 Msa0815380:intron 40.0%
!! GAAGCGAAATTGAGTTGGAA+AGG + chr5_3:48906804-48906823 None:intergenic 40.0%
TTCAGGAAGCGAAATTGAGT+TGG + chr5_3:48906809-48906828 None:intergenic 40.0%
TAGTGATTGATGAAGCAGCA+AGG - chr5_3:48906944-48906963 Msa0815380:intron 40.0%
! TGGCCTATACCGTTTTGTAA+CGG + chr5_3:48907002-48907021 None:intergenic 40.0%
AGAGTGCAATTAGTTAGAGG+AGG + chr5_3:48907236-48907255 None:intergenic 40.0%
! GTGAGAGTGCAATTAGTTAG+AGG + chr5_3:48907239-48907258 None:intergenic 40.0%
! GAGTTGATTGTGTCTTTGTG+TGG - chr5_3:48907339-48907358 Msa0815380:intron 40.0%
GGGATATGTGTATGAGAGTT+TGG - chr5_3:48907360-48907379 Msa0815380:intron 40.0%
ACCTAGAAAGAAGAGTTGAG+AGG - chr5_3:48907451-48907470 Msa0815380:intron 40.0%
TCCTCTCAACTCTTCTTTCT+AGG + chr5_3:48907455-48907474 None:intergenic 40.0%
AGTTGAGAGGAATTCGTAGT+TGG - chr5_3:48907464-48907483 Msa0815380:intron 40.0%
GTTGAGAGGAATTCGTAGTT+GGG - chr5_3:48907465-48907484 Msa0815380:intron 40.0%
ATTCGTAGTTGGGTTATGTG+AGG - chr5_3:48907475-48907494 Msa0815380:intron 40.0%
TTCGTAGTTGGGTTATGTGA+GGG - chr5_3:48907476-48907495 Msa0815380:intron 40.0%
! CGTTAAGGTTTTCACGGTTT+CGG + chr5_3:48907622-48907641 None:intergenic 40.0%
AGAATGCAATGTTGAAGACC+CGG + chr5_3:48907733-48907752 None:intergenic 40.0%
! ATTGCGGACAATTGTCGATT+TGG - chr5_3:48907895-48907914 Msa0815380:intron 40.0%
TGTCTTGCTTAACTTTCTCC+TGG + chr5_3:48908404-48908423 None:intergenic 40.0%
ACTGTGAGATCAAATGGAAG+TGG - chr5_3:48908510-48908529 Msa0815380:intron 40.0%
GAGCTAATGTTGCAATGACA+AGG - chr5_3:48908562-48908581 Msa0815380:intron 40.0%
TGAATCTGCAAATACACACG+AGG + chr5_3:48908617-48908636 None:intergenic 40.0%
TAGCCAGTAGTGATTCTATC+TGG - chr5_3:48908707-48908726 Msa0815380:intron 40.0%
TCTCCAGATAGAATCACTAC+TGG + chr5_3:48908713-48908732 None:intergenic 40.0%
CTGTTATCATAATGCTGACG+AGG - chr5_3:48908762-48908781 Msa0815380:intron 40.0%
!!! ACATTTTTTGTGGCAGGTCA+AGG - chr5_3:48909021-48909040 Msa0815380:intron 40.0%
GATTCACCAGCTTCAAACTT+GGG + chr5_3:48909058-48909077 None:intergenic 40.0%
TGATTCACCAGCTTCAAACT+TGG + chr5_3:48909059-48909078 None:intergenic 40.0%
CTACGCTTTGTGACAAAGGT+TGG - chr5_3:48897304-48897323 Msa0815380:three_prime_UTR 45.0%
TGTTAGGAGTAATCACCGAG+TGG + chr5_3:48897957-48897976 None:intergenic 45.0%
CTCGGTGATTACTCCTAACA+AGG - chr5_3:48897957-48897976 Msa0815380:intron 45.0%
!! ATCAACATAACGGGTGCATC+TGG - chr5_3:48898919-48898938 Msa0815380:intron 45.0%
GAAACTCACGTGCACACTAT+CGG + chr5_3:48898985-48899004 None:intergenic 45.0%
ATAAACGTGGAAGTGACACG+TGG - chr5_3:48899109-48899128 Msa0815380:intron 45.0%
CCATAGAAGGGACTTCTTAC+GGG + chr5_3:48900070-48900089 None:intergenic 45.0%
CCCATAGAAGGGACTTCTTA+CGG + chr5_3:48900071-48900090 None:intergenic 45.0%
CCGTAAGAAGTCCCTTCTAT+GGG - chr5_3:48900068-48900087 Msa0815380:CDS 45.0%
GATTTAAGGAATAGCCCGTG+CGG + chr5_3:48900726-48900745 None:intergenic 45.0%
AGTACCTGGTAGTAGGGTAT+GGG + chr5_3:48901157-48901176 None:intergenic 45.0%
AAGTACCTGGTAGTAGGGTA+TGG + chr5_3:48901158-48901177 None:intergenic 45.0%
ATTGGATATGGGTAGGGTAG+CGG + chr5_3:48901183-48901202 None:intergenic 45.0%
CTACCCTACCCATATCCAAT+GGG - chr5_3:48901183-48901202 Msa0815380:intron 45.0%
TACCCTACCCATATCCAATG+GGG - chr5_3:48901184-48901203 Msa0815380:intron 45.0%
ATCCCCATTGGATATGGGTA+GGG + chr5_3:48901189-48901208 None:intergenic 45.0%
TATCCCCATTGGATATGGGT+AGG + chr5_3:48901190-48901209 None:intergenic 45.0%
ATCTTATCTCCGTCTCCAAC+GGG - chr5_3:48901219-48901238 Msa0815380:intron 45.0%
TATTATCCATTGCGGGGATG+GGG + chr5_3:48901259-48901278 None:intergenic 45.0%
GCATTGCAACATTGTGTGTG+AGG + chr5_3:48901311-48901330 None:intergenic 45.0%
CGACGATAGTCGATAGATCA+TGG - chr5_3:48901351-48901370 Msa0815380:five_prime_UTR 45.0%
TTTGGGTATGAGTTCAGGGT+GGG - chr5_3:48901522-48901541 Msa0815380:five_prime_UTR 45.0%
! GGGATGAGTAACGGAGATAT+AGG + chr5_3:48901552-48901571 None:intergenic 45.0%
ACTCAAACCGAGTCAAAGTG+GGG - chr5_3:48901598-48901617 Msa0815380:five_prime_UTR 45.0%
!! GCTTTTTCCCCACTTTGACT+CGG + chr5_3:48901608-48901627 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr5_3:48903510-48903529 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr5_3:48903510-48903529 Msa0815380:intron 45.0%
GAAAGTAGCGCATGAGAAGA+GGG + chr5_3:48903769-48903788 None:intergenic 45.0%
TGAAAGTAGCGCATGAGAAG+AGG + chr5_3:48903770-48903789 None:intergenic 45.0%
GTGTACTTGAAAGGTCGAAC+CGG - chr5_3:48903848-48903867 Msa0815380:intron 45.0%
!!! CAGATCGTTTTTTTCCCCAG+CGG - chr5_3:48904434-48904453 Msa0815380:intron 45.0%
ATCGGAAGATAGTTTCCGCT+GGG + chr5_3:48904452-48904471 None:intergenic 45.0%
GCAATAAGATCTCCTGATGC+AGG + chr5_3:48904943-48904962 None:intergenic 45.0%
GCTTGTAACCGCATCTTGTT+GGG + chr5_3:48905604-48905623 None:intergenic 45.0%
AGCTTGTAACCGCATCTTGT+TGG + chr5_3:48905605-48905624 None:intergenic 45.0%
GGTTACAAGCTGTGCTAGTA+TGG - chr5_3:48905614-48905633 Msa0815380:intron 45.0%
!! TTTGTTTTTCCTGTCCCTGG+TGG + chr5_3:48905678-48905697 None:intergenic 45.0%
!!! GACTTTGTTTTTCCTGTCCC+TGG + chr5_3:48905681-48905700 None:intergenic 45.0%
TGCAGTATTAGTTGGAGCAC+AGG + chr5_3:48905754-48905773 None:intergenic 45.0%
TCATGCAGTGCTATGCTGAA+TGG - chr5_3:48905937-48905956 Msa0815380:intron 45.0%
AAGCTTAATGCAGCTGCTTG+AGG - chr5_3:48906318-48906337 Msa0815380:intron 45.0%
AGGGATATGTGAAGAGAGCA+AGG - chr5_3:48906479-48906498 Msa0815380:intron 45.0%
GCTCCATGGTCATGATACTT+TGG + chr5_3:48906525-48906544 None:intergenic 45.0%
CTGCTTCACAAATTGCTCCA+TGG + chr5_3:48906539-48906558 None:intergenic 45.0%
! TTTTGGCATGTGGGTGCATA+AGG + chr5_3:48906605-48906624 None:intergenic 45.0%
!! GAAAGCATTCCTGCTTGCTT+TGG - chr5_3:48906733-48906752 Msa0815380:intron 45.0%
! TTTTGTAACGGCCGATATCG+CGG + chr5_3:48906990-48907009 None:intergenic 45.0%
CGATATCGGCCGTTACAAAA+CGG - chr5_3:48906990-48907009 Msa0815380:intron 45.0%
! GCAAATAACGGTAACGGTGA+TGG + chr5_3:48907022-48907041 None:intergenic 45.0%
!! AGTTAGAGGAGGCTTTGAAG+AGG + chr5_3:48907225-48907244 None:intergenic 45.0%
GAATGCAATGTTGAAGACCC+GGG + chr5_3:48907732-48907751 None:intergenic 45.0%
! TTTGAGAGACTGGTGATGCT+AGG - chr5_3:48907928-48907947 Msa0815380:intron 45.0%
GCTTTCATCCTTGACAGCTA+GGG + chr5_3:48908049-48908068 None:intergenic 45.0%
AGCTTTCATCCTTGACAGCT+AGG + chr5_3:48908050-48908069 None:intergenic 45.0%
CGGACATAGCTTGAAGAACA+TGG - chr5_3:48908152-48908171 Msa0815380:intron 45.0%
!! CGTTCTGTTGATGGTTTCCA+AGG - chr5_3:48908459-48908478 Msa0815380:intron 45.0%
!! TCTGTTGATGGTTTCCAAGG+CGG - chr5_3:48908462-48908481 Msa0815380:intron 45.0%
TAATATCTTCCTCACCGCCT+TGG + chr5_3:48908479-48908498 None:intergenic 45.0%
ATGTTGCAATGACAAGGGCT+AGG - chr5_3:48908568-48908587 Msa0815380:intron 45.0%
!! AAATAAAAATTAATTAATGA+TGG - chr5_3:48898108-48898127 Msa0815380:CDS 5.0%
!!! AAATGTTTTTTTTTATATTT+TGG + chr5_3:48898799-48898818 None:intergenic 5.0%
!! TTTAAAAACAATATTTAATT+TGG + chr5_3:48899316-48899335 None:intergenic 5.0%
!! AAATTAATAAAAATGAAAAA+TGG - chr5_3:48900006-48900025 Msa0815380:CDS 5.0%
!! AATTAATAAAAATGAAAAAT+GGG - chr5_3:48900007-48900026 Msa0815380:CDS 5.0%
!!! ATATTTTATTTAACAAAAAT+CGG + chr5_3:48900166-48900185 None:intergenic 5.0%
!! ATATATATATATATAAAGTA+AGG + chr5_3:48900260-48900279 None:intergenic 5.0%
!! ATGAATAATATAAAAAATAT+AGG + chr5_3:48902229-48902248 None:intergenic 5.0%
CGCTTTGTGACAAAGGTTGG+AGG - chr5_3:48897307-48897326 Msa0815380:three_prime_UTR 50.0%
TGTATTTATCCGGCGTTGCC+CGG - chr5_3:48898296-48898315 Msa0815380:intron 50.0%
CCCGTAAGAAGTCCCTTCTA+TGG - chr5_3:48900067-48900086 Msa0815380:CDS 50.0%
AGTCCCTTCTATGGGAGTCA+TGG - chr5_3:48900076-48900095 Msa0815380:CDS 50.0%
GGACCATGACTCCCATAGAA+GGG + chr5_3:48900082-48900101 None:intergenic 50.0%
AGGACCATGACTCCCATAGA+AGG + chr5_3:48900083-48900102 None:intergenic 50.0%
!! GGGTTTTCGGGCTACTTGAT+CGG + chr5_3:48900145-48900164 None:intergenic 50.0%
GTACCTGGTAGTAGGGTATG+GGG + chr5_3:48901156-48901175 None:intergenic 50.0%
CGGGTAAGTACCTGGTAGTA+GGG + chr5_3:48901163-48901182 None:intergenic 50.0%
TTGGATATGGGTAGGGTAGC+GGG + chr5_3:48901182-48901201 None:intergenic 50.0%
GCTACCCTACCCATATCCAA+TGG - chr5_3:48901182-48901201 Msa0815380:intron 50.0%
ATACCTGAACCCGTTGGAGA+CGG + chr5_3:48901231-48901250 None:intergenic 50.0%
GTTTGGGTATGAGTTCAGGG+TGG - chr5_3:48901521-48901540 Msa0815380:five_prime_UTR 50.0%
TACGGGTACGGGATGAGTAA+CGG + chr5_3:48901561-48901580 None:intergenic 50.0%
!! TTGGTTCGGATGAGTACTCG+CGG - chr5_3:48901641-48901660 Msa0815380:five_prime_UTR 50.0%
TGTACTTTCTTGGACCCTCG+AGG - chr5_3:48904027-48904046 Msa0815380:intron 50.0%
TCGGAAGATAGTTTCCGCTG+GGG + chr5_3:48904451-48904470 None:intergenic 50.0%
GATCGGAAGATAGTTTCCGC+TGG + chr5_3:48904453-48904472 None:intergenic 50.0%
TGGTGGTCCCCATATCAGTT+TGG + chr5_3:48905661-48905680 None:intergenic 50.0%
AAACTGATATGGGGACCACC+AGG - chr5_3:48905660-48905679 Msa0815380:intron 50.0%
AACTGATATGGGGACCACCA+GGG - chr5_3:48905661-48905680 Msa0815380:intron 50.0%
CAGTGTTGCAAGTGGCAACA+AGG - chr5_3:48905772-48905791 Msa0815380:intron 50.0%
! CTTGATGGTCCAAAGCAAGC+AGG + chr5_3:48906745-48906764 None:intergenic 50.0%
CAGGAACGTTACCGCGATAT+CGG - chr5_3:48906976-48906995 Msa0815380:intron 50.0%
CGGCCGTTACAAAACGGTAT+AGG - chr5_3:48906996-48907015 Msa0815380:intron 50.0%
! AACGGTTTTCGCGGCTGTAA+CGG + chr5_3:48907123-48907142 None:intergenic 50.0%
! TCGCGTTGTAACGGTTTTCG+CGG + chr5_3:48907132-48907151 None:intergenic 50.0%
!! TAGAGGAGGCTTTGAAGAGG+AGG + chr5_3:48907222-48907241 None:intergenic 50.0%
CGTACATATTGCGGTCGTCA+CGG + chr5_3:48907583-48907602 None:intergenic 50.0%
CGGACGTTGCGTACATATTG+CGG + chr5_3:48907592-48907611 None:intergenic 50.0%
TTCACGGTTTCGGACTGTCA+CGG + chr5_3:48907612-48907631 None:intergenic 50.0%
! CGGTCGCGTTAAGGTTTTCA+CGG + chr5_3:48907628-48907647 None:intergenic 50.0%
!! TTCAGCTGTGCTGCTTCACA+AGG + chr5_3:48907679-48907698 None:intergenic 50.0%
CATGATTCCGTTACAGCTCC+CGG - chr5_3:48907711-48907730 Msa0815380:intron 50.0%
ATGATTCCGTTACAGCTCCC+GGG - chr5_3:48907712-48907731 Msa0815380:intron 50.0%
TCCAGCGCTAGTCAAAAGCA+AGG - chr5_3:48907774-48907793 Msa0815380:intron 50.0%
!! ACCTTGCTTTTGACTAGCGC+TGG + chr5_3:48907778-48907797 None:intergenic 50.0%
TCCAAGGGTGAGGAGACATT+TGG - chr5_3:48908126-48908145 Msa0815380:intron 50.0%
ACCAAATGTCTCCTCACCCT+TGG + chr5_3:48908130-48908149 None:intergenic 50.0%
TGCTGACGAGGACATGAAAC+TGG - chr5_3:48908774-48908793 Msa0815380:intron 50.0%
TGGCAGGTCAAGGAAACCTA+GGG - chr5_3:48909031-48909050 Msa0815380:intron 50.0%
TGCACAGTGTTCGTTCGCTA+AGG - chr5_3:48909081-48909100 Msa0815380:intron 50.0%
GCACAGTGTTCGTTCGCTAA+GGG - chr5_3:48909082-48909101 Msa0815380:intron 50.0%
GTATTTATCCGGCGTTGCCC+GGG - chr5_3:48898297-48898316 Msa0815380:intron 55.0%
ATATCTAACCCGGGCAACGC+CGG + chr5_3:48899431-48899450 None:intergenic 55.0%
! ATTTTACAGGGCGCGGGAGA+AGG + chr5_3:48899708-48899727 None:intergenic 55.0%
CAACAGACCCGTGCTAAGCA+CGG - chr5_3:48900690-48900709 Msa0815380:five_prime_UTR 55.0%
AACAGACCCGTGCTAAGCAC+GGG - chr5_3:48900691-48900710 Msa0815380:five_prime_UTR 55.0%
GTTAGTCAAGGCAATGGGGC+AGG - chr5_3:48901105-48901124 Msa0815380:intron 55.0%
TGGTAGTAGGGTATGGGGAC+GGG + chr5_3:48901151-48901170 None:intergenic 55.0%
CTGGTAGTAGGGTATGGGGA+CGG + chr5_3:48901152-48901171 None:intergenic 55.0%
GCGGGTAAGTACCTGGTAGT+AGG + chr5_3:48901164-48901183 None:intergenic 55.0%
!! TAGGGTAGCGGGTAAGTACC+TGG + chr5_3:48901171-48901190 None:intergenic 55.0%
! TGGTTCGGATGAGTACTCGC+GGG - chr5_3:48901642-48901661 Msa0815380:five_prime_UTR 55.0%
GGATGAGTACTCGCGGGTAT+GGG - chr5_3:48901648-48901667 Msa0815380:five_prime_UTR 55.0%
! GGCGAGTTTTGCGGTCGTAA+CGG + chr5_3:48907102-48907121 None:intergenic 55.0%
! GGCTGTAACGGCGAGTTTTG+CGG + chr5_3:48907111-48907130 None:intergenic 55.0%
! AACGGTAACGGTTGCGGTCA+CGG + chr5_3:48907648-48907667 None:intergenic 55.0%
! CGGGAGCTGTAACGGAATCA+TGG + chr5_3:48907713-48907732 None:intergenic 55.0%
TGAAGACCCGGGAGCTGTAA+CGG + chr5_3:48907721-48907740 None:intergenic 55.0%
TTCGGATGCCCTAGCTGTCA+AGG - chr5_3:48908038-48908057 Msa0815380:intron 55.0%
GGTGAGGAGACATTTGGTCG+CGG - chr5_3:48908132-48908151 Msa0815380:intron 55.0%
TGATGGTTTCCAAGGCGGTG+AGG - chr5_3:48908467-48908486 Msa0815380:intron 55.0%
GTGGCAGGTCAAGGAAACCT+AGG - chr5_3:48909030-48909049 Msa0815380:intron 55.0%
GGCAGGTCAAGGAAACCTAG+GGG - chr5_3:48909032-48909051 Msa0815380:intron 55.0%
AGCTTCAAACTTGGGCCCCT+AGG + chr5_3:48909050-48909069 None:intergenic 55.0%
! TAGGGGCCCAAGTTTGAAGC+TGG - chr5_3:48909049-48909068 Msa0815380:intron 55.0%
ATGTCTAACCCGGGCAACGC+CGG + chr5_3:48898308-48898327 None:intergenic 60.0%
TTTAGAGACCCGGCGTTGCC+CGG - chr5_3:48899419-48899438 Msa0815380:intron 60.0%
TATCTAACCCGGGCAACGCC+GGG + chr5_3:48899430-48899449 None:intergenic 60.0%
GCGGGAGAAGGCAATAGGGT+GGG + chr5_3:48899696-48899715 None:intergenic 60.0%
ACAGACCCGTGCTAAGCACG+GGG - chr5_3:48900692-48900711 Msa0815380:five_prime_UTR 60.0%
AGTCAAGGCAATGGGGCAGG+TGG - chr5_3:48901108-48901127 Msa0815380:intron 60.0%
GTCAAGGCAATGGGGCAGGT+GGG - chr5_3:48901109-48901128 Msa0815380:intron 60.0%
TCAAGGCAATGGGGCAGGTG+GGG - chr5_3:48901110-48901129 Msa0815380:intron 60.0%
GGTAGTAGGGTATGGGGACG+GGG + chr5_3:48901150-48901169 None:intergenic 60.0%
CGTCCCCATACCCTACTACC+AGG - chr5_3:48901150-48901169 Msa0815380:intron 60.0%
! TCTCCGTCTCCAACGGGTTC+AGG - chr5_3:48901225-48901244 Msa0815380:intron 60.0%
GTGGGGATACCTGAACCCGT+TGG + chr5_3:48901237-48901256 None:intergenic 60.0%
ATCCATTGCGGGGATGGGGT+GGG + chr5_3:48901255-48901274 None:intergenic 60.0%
TATCCATTGCGGGGATGGGG+TGG + chr5_3:48901256-48901275 None:intergenic 60.0%
CGGATGAGTACTCGCGGGTA+TGG - chr5_3:48901647-48901666 Msa0815380:five_prime_UTR 60.0%
ATATGGGGACCACCAGGGAC+AGG - chr5_3:48905666-48905685 Msa0815380:intron 60.0%
GCGGTCGTAACGGTGTTTCG+AGG + chr5_3:48907092-48907111 None:intergenic 60.0%
TTGCGGTCACGGTCGCGTTA+AGG + chr5_3:48907637-48907656 None:intergenic 60.0%
TTAGAGACCCGGCGTTGCCC+GGG - chr5_3:48899420-48899439 Msa0815380:intron 65.0%
CGCGGGAGAAGGCAATAGGG+TGG + chr5_3:48899697-48899716 None:intergenic 65.0%
GGGCGCGGGAGAAGGCAATA+GGG + chr5_3:48899700-48899719 None:intergenic 65.0%
AGGGCGCGGGAGAAGGCAAT+AGG + chr5_3:48899701-48899720 None:intergenic 65.0%
GAATAGCCCGTGCGGAGCAC+GGG + chr5_3:48900718-48900737 None:intergenic 65.0%
GGAATAGCCCGTGCGGAGCA+CGG + chr5_3:48900719-48900738 None:intergenic 65.0%
GTAGGGTATGGGGACGGGGA+AGG + chr5_3:48901146-48901165 None:intergenic 65.0%
TCCATTGCGGGGATGGGGTG+GGG + chr5_3:48901254-48901273 None:intergenic 65.0%
TGTCGCTCTATTGGGCGCCC+AGG + chr5_3:48904499-48904518 None:intergenic 65.0%
ACGGGCCCCGTGCTTAGCAC+GGG + chr5_3:48900700-48900719 None:intergenic 70.0%
CACGGGCCCCGTGCTTAGCA+CGG + chr5_3:48900701-48900720 None:intergenic 70.0%
TCCCCACCCCATCCCCGCAA+TGG - chr5_3:48901250-48901269 Msa0815380:intron 70.0%
! CACGGGGCCCGTGCTCCGCA+CGG - chr5_3:48900708-48900727 Msa0815380:five_prime_UTR 80.0%
! ACGGGGCCCGTGCTCCGCAC+GGG - chr5_3:48900709-48900728 Msa0815380:five_prime_UTR 80.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 48897213 48909345 48897213 ID=Msa0815380;Name=Msa0815380
chr5_3 mRNA 48897213 48909345 48897213 ID=Msa0815380-mRNA-1;Parent=Msa0815380;Name=Msa0815380-mRNA-1;_AED=0.24;_eAED=0.24;_QI=1618|0.87|0.88|1|0.75|0.66|9|218|565
chr5_3 exon 48897213 48897521 48897213 ID=Msa0815380-mRNA-1:exon:14685;Parent=Msa0815380-mRNA-1
chr5_3 exon 48897608 48897886 48897608 ID=Msa0815380-mRNA-1:exon:14684;Parent=Msa0815380-mRNA-1
chr5_3 exon 48897969 48898227 48897969 ID=Msa0815380-mRNA-1:exon:14683;Parent=Msa0815380-mRNA-1
chr5_3 exon 48898339 48898663 48898339 ID=Msa0815380-mRNA-1:exon:14682;Parent=Msa0815380-mRNA-1
chr5_3 exon 48898763 48898869 48898763 ID=Msa0815380-mRNA-1:exon:14681;Parent=Msa0815380-mRNA-1
chr5_3 exon 48899597 48901051 48899597 ID=Msa0815380-mRNA-1:exon:14680;Parent=Msa0815380-mRNA-1
chr5_3 exon 48901301 48901882 48901301 ID=Msa0815380-mRNA-1:exon:14679;Parent=Msa0815380-mRNA-1
chr5_3 exon 48902477 48902578 48902477 ID=Msa0815380-mRNA-1:exon:14678;Parent=Msa0815380-mRNA-1
chr5_3 exon 48909230 48909345 48909230 ID=Msa0815380-mRNA-1:exon:14677;Parent=Msa0815380-mRNA-1
chr5_3 five_prime_UTR 48909230 48909345 48909230 ID=Msa0815380-mRNA-1:five_prime_utr;Parent=Msa0815380-mRNA-1
chr5_3 five_prime_UTR 48902477 48902578 48902477 ID=Msa0815380-mRNA-1:five_prime_utr;Parent=Msa0815380-mRNA-1
chr5_3 five_prime_UTR 48901301 48901882 48901301 ID=Msa0815380-mRNA-1:five_prime_utr;Parent=Msa0815380-mRNA-1
chr5_3 five_prime_UTR 48900234 48901051 48900234 ID=Msa0815380-mRNA-1:five_prime_utr;Parent=Msa0815380-mRNA-1
chr5_3 CDS 48899597 48900233 48899597 ID=Msa0815380-mRNA-1:cds;Parent=Msa0815380-mRNA-1
chr5_3 CDS 48898763 48898869 48898763 ID=Msa0815380-mRNA-1:cds;Parent=Msa0815380-mRNA-1
chr5_3 CDS 48898339 48898663 48898339 ID=Msa0815380-mRNA-1:cds;Parent=Msa0815380-mRNA-1
chr5_3 CDS 48897969 48898227 48897969 ID=Msa0815380-mRNA-1:cds;Parent=Msa0815380-mRNA-1
chr5_3 CDS 48897608 48897886 48897608 ID=Msa0815380-mRNA-1:cds;Parent=Msa0815380-mRNA-1
chr5_3 CDS 48897431 48897521 48897431 ID=Msa0815380-mRNA-1:cds;Parent=Msa0815380-mRNA-1
chr5_3 three_prime_UTR 48897213 48897430 48897213 ID=Msa0815380-mRNA-1:three_prime_utr;Parent=Msa0815380-mRNA-1
Gene Sequence

>Msa0815380

ATGCAGCTGCTTGAGGACCCTAGAGAGCAAATTTTCTCAAAGATGGGTTACAAGTCCCTTGATGATTTTGCTACAAATAGTATCGTAGTATCTGCATATAGTGCATACAAGGAAAATATAAGGTATGGTAAATATGATGATTCTTTGACTTTTGAGGGATATGTGAAGAGAGCAAGGAAAGAGATTATAGAGCTATACCAAAGTATCATGACCATGGAGCAATTTGTGAAGCAGAGATTTGGAGAATTAAGTGAGAAGCTAAAGTTCTTGATACATACCTTATGCACCCACATGCCAAAATCTTTCATTTCAGTTAACAACATGCTCCAAGCTCTTGACTTGTTAAAATCAATGGAAATTTCCTTGAGTCAAGCCAAATTTAAGCAAACTGTTGATGATTGTGAAGAAGAAAGCATTCCTGCTTGCTTTGGACCATCAAGTTTGGAAAGAAATGATTGCCTTCGGATACTAAGTTTCCTTTCCAACTCAATTTCGCTTCCTGAATTTAAAGTGAGACATCAAGTGGAAAAGTTTTGCTGGTCAAATGCTAGTCTAATTTTGTGTACTGTATCAAGTTCTGTCAAACTTTACTCAGAAGAGACGAGTCCAGTGAAATTTTTAGTGATTGATGAAGCAGCACAGCTGAAAGAATGTGAATCCATGATTCCGTTACAGCTCCCGGGTCTTCAACATTGCATTCTTATAGGTGATGAGAAACAACTTCCAGCGCTAGTCAAAAGCAAGATTGCGGACAATTGTCGATTTGGAAGAAGTATGTTTGAGAGACTGGTGATGCTAGGATACAAGAAGCATATGCTTAATGTTCAGTACCGAATGCATCCATCAATAAGCTTGTTTCCTTGCAAAGAGTTCTATGATGAAAAAATTTCGGATGCCCTAGCTGTCAAGGATGAAAGCTATAGTAAGAGCTTTCTTGAAGGAGAAATGTATTCTTCTTATTCTTTTATTAATATATCCAAGGGTGAGGAGACATTTGGTCGCGGACATAGCTTGAAGAACATGGTTGAAGTTGCCGTCATTTCTGAGATGATTAAAAACCTAAGAAAAGAGTTTATGAGGACAAAGAAGAAAGTTAGCATTGGAATAATATCTCCATATAATGCTCAAGTTTATGAAATCCAGGAGAAAGTTAAGCAAGACACTTGGGATTCTAATTCTGACTTTTCTGTTAATGTTCGTTCTGTTGATGGTTTCCAAGGCGGTGAGGAAGATATTATAATAATATCTACTGTGAGATCAAATGGAAGTGGTAATATCGGTTTTCTTTCAAATAGACAAAGAGCTAATGTTGCAATGACAAGGGCTAGATATTGTCTTTGGATATTAGGCAATGCATCTACTTTAGCCAGTAGTGATTCTATCTGGAGAAAGTTAATTATTGATGCTAAGAGAAGAGACTGTTATCATAATGCTGACGAGGACATGAAACTGGCTCGAGTTATTGATGATGTCTTGCTTGAGATTGAACTTCTTGAAGAATCTGAGTCAACATTTAAGAAACTCAGTCTATGTGAAAAATCTGAAATTGATGCTATACTTCCTCAAGGTAATCAAAAACTACATTTCTTCAAATATTCATGTAACATGTCAAGGAAACCTAGGGGCCCAAGTTTGAAGCTGGTGAATCAATTGCACAGTGTTCGTTCGCTAAGGGAAGACATTGAATCACCGTTGTGA
Protein sequence

>Msa0815380

MQLLEDPREQIFSKMGYKSLDDFATNSIVVSAYSAYKENIRYGKYDDSLTFEGYVKRARKEIIELYQSIMTMEQFVKQRFGELSEKLKFLIHTLCTHMPKSFISVNNMLQALDLLKSMEISLSQAKFKQTVDDCEEESIPACFGPSSLERNDCLRILSFLSNSISLPEFKVRHQVEKFCWSNASLILCTVSSSVKLYSEETSPVKFLVIDEAAQLKECESMIPLQLPGLQHCILIGDEKQLPALVKSKIADNCRFGRSMFERLVMLGYKKHMLNVQYRMHPSISLFPCKEFYDEKISDALAVKDESYSKSFLEGEMYSSYSFINISKGEETFGRGHSLKNMVEVAVISEMIKNLRKEFMRTKKKVSIGIISPYNAQVYEIQEKVKQDTWDSNSDFSVNVRSVDGFQGGEEDIIIISTVRSNGSGNIGFLSNRQRANVAMTRARYCLWILGNASTLASSDSIWRKLIIDAKRRDCYHNADEDMKLARVIDDVLLEIELLEESESTFKKLSLCEKSEIDAILPQGNQKLHFFKYSCNMSRKPRGPSLKLVNQLHSVRSLREDIESPL*