AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1269970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1269970 MtrunA17_Chr8g0334391 87.815 476 10 1 1 476 1 428 0.0 845
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1269970 AT5G01010.1 59.667 481 135 4 3 474 2 432 0.0 575
Msa1269970 AT5G01010.2 58.884 484 175 6 3 474 2 473 0.0 560
Msa1269970 AT5G01010.5 58.884 484 175 6 3 474 2 473 0.0 560
Msa1269970 AT5G01010.3 59.188 468 132 4 3 461 2 419 0.0 553
Msa1269970 AT5G01010.4 57.645 484 174 7 3 474 2 466 0.0 539

Find 144 sgRNAs with CRISPR-Local

Find 548 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAGTCAATCTCGATAATT+AGG 0.138301 8_3:-3304273 None:intergenic
TTCCTTATTGTACTCTAATT+TGG 0.147570 8_3:+3311432 Msa1269970:CDS
GGGGAATTTCTGCACATTAA+TGG 0.230921 8_3:+3311760 Msa1269970:intron
TCGTACTATGACCACTGATT+TGG 0.264731 8_3:+3304588 Msa1269970:CDS
CTGGAAGCTATAAACTGATA+TGG 0.273766 8_3:+3311783 Msa1269970:CDS
AGAGGTTCATCACATTTCTT+AGG 0.283237 8_3:+3308908 Msa1269970:CDS
TTAGGATATTGGATTTAGTT+TGG 0.287616 8_3:+3311361 Msa1269970:intron
TTTGTTTATTGTTAGGATAT+TGG 0.304837 8_3:+3311350 Msa1269970:intron
CGTACTATGACCACTGATTT+GGG 0.334259 8_3:+3304589 Msa1269970:CDS
TTAGTCAATCTCGATAATTA+GGG 0.346894 8_3:-3304272 None:intergenic
TGTATAAAATTGTCAATTGT+AGG 0.349727 8_3:+3312437 Msa1269970:three_prime_UTR
AGTACAAGGCAAGATAAATA+TGG 0.362025 8_3:+3311245 Msa1269970:CDS
TTCATTCCAGCAGATGTTGC+TGG 0.364334 8_3:+3310757 Msa1269970:CDS
GGCTGCTTCTACAGAGGGTT+TGG 0.370132 8_3:+3304471 Msa1269970:CDS
ATCAATCTTATGTGGAGGTT+GGG 0.375986 8_3:-3304638 None:intergenic
CGACAGGAAGGCCCTAGTTA+TGG 0.377287 8_3:-3304497 None:intergenic
ATGAAGATTGATAAGGCTTC+TGG 0.378509 8_3:-3311470 None:intergenic
CATCAATCTTATGTGGAGGT+TGG 0.384125 8_3:-3304639 None:intergenic
GTTCTTCATCAAGCAATATC+AGG 0.386716 8_3:-3312513 None:intergenic
GATTCTTCCTTTCATTATCA+TGG 0.387212 8_3:+3307173 Msa1269970:CDS
TTGCTGGTGCAGTGGAAATA+AGG 0.393624 8_3:+3310773 Msa1269970:CDS
ACTGTAGGTGCTACGGTATA+AGG 0.397024 8_3:+3312190 Msa1269970:intron
GAGAAGAAGAAGAAAAGAAA+GGG 0.410720 8_3:+3304394 Msa1269970:five_prime_UTR
AACCAAATTAGAGTACAATA+AGG 0.410834 8_3:-3311434 None:intergenic
AAGAAAAGAAAGGGAGAGGT+GGG 0.412318 8_3:+3304403 Msa1269970:five_prime_UTR
AATGGCACTGGCTCTGCAAC+AGG 0.413130 8_3:-3312227 None:intergenic
CTGGATTACATTACCGTGTC+TGG 0.414338 8_3:-3304727 None:intergenic
AAAATTACTAGTACATCAAT+AGG 0.416004 8_3:-3312297 None:intergenic
AGAGAAGAAGAAGAAAAGAA+AGG 0.417999 8_3:+3304393 Msa1269970:five_prime_UTR
GCAAGCAGAGGTGGATGCTT+TGG 0.423060 8_3:+3305035 Msa1269970:CDS
GATAGGAGGTGTAAAGGAGC+TGG 0.426347 8_3:+3312397 Msa1269970:three_prime_UTR
AGGGGAACAGTTAGCTGTCT+TGG 0.427621 8_3:+3308852 Msa1269970:CDS
GTGGATGCTTTGGTAAATTC+TGG 0.428219 8_3:+3305045 Msa1269970:CDS
GCTCAGCTTGGCTCTGCAAC+AGG 0.429973 8_3:+3305132 Msa1269970:CDS
GATATTGCTTGATGAAGAAC+AGG 0.430713 8_3:+3312516 Msa1269970:three_prime_UTR
GGAGAAAGAGGAGGAGTGAA+GGG 0.434405 8_3:-3304538 None:intergenic
GACAGGAAGGCCCTAGTTAT+GGG 0.435903 8_3:-3304496 None:intergenic
GGAAGGGATAGGAGGTGTAA+AGG 0.439158 8_3:+3312391 Msa1269970:three_prime_UTR
TCATCGCACTTTGACCACTT+TGG 0.439826 8_3:+3304897 Msa1269970:CDS
TTCGAGAGGGATCGATGAAT+GGG 0.445075 8_3:+3304345 Msa1269970:five_prime_UTR
TCCGATGGCTGCTTCTACAG+AGG 0.447189 8_3:+3304465 Msa1269970:exon
AATTGAACACATCTCGATCT+TGG 0.449135 8_3:-3312356 None:intergenic
AACAAAACATGATACAGAAC+TGG 0.451046 8_3:-3311549 None:intergenic
ACCCTCGTCAAGTACCTTGT+TGG 0.452026 8_3:+3305165 Msa1269970:CDS
TGTTCAATTGATTTCTATGA+AGG 0.457670 8_3:+3312370 Msa1269970:three_prime_UTR
GTAGAAGCAGCCATCGGAAT+CGG 0.457672 8_3:-3304460 None:intergenic
AGCTGTTGATGTCTACACTA+TGG 0.459802 8_3:+3308879 Msa1269970:CDS
ATTCGAGAGGGATCGATGAA+TGG 0.460080 8_3:+3304344 Msa1269970:five_prime_UTR
AGGGTTTGGTGCCCATAACT+AGG 0.461857 8_3:+3304485 Msa1269970:CDS
GCGATGACGCTGCTCCTCCA+TGG 0.464270 8_3:-3307104 None:intergenic
GTATAAAATTGTCAATTGTA+GGG 0.468884 8_3:+3312438 Msa1269970:three_prime_UTR
ATTCTTCCTTTCATTATCAT+GGG 0.475061 8_3:+3307174 Msa1269970:CDS
TTTGAGCTTCCCAAGAATAA+CGG 0.475966 8_3:-3304866 None:intergenic
CAAAGAAAGATCACGAAGAA+TGG 0.476155 8_3:-3312574 None:intergenic
TTACCCCATTTCATACGAAA+AGG 0.477327 8_3:-3312615 None:intergenic
GAAGTAAGGTGAGAGACGTC+TGG 0.478606 8_3:-3304559 None:intergenic
TTGCATCAGTCGAATGGCAC+TGG 0.479589 8_3:-3312239 None:intergenic
TTGGAGTTTGCAAGTCCTAC+CGG 0.480664 8_3:+3311380 Msa1269970:CDS
GAAGAAGAAAAGAAAGGGAG+AGG 0.480795 8_3:+3304399 Msa1269970:five_prime_UTR
ACTGCACCAGCAACATCTGC+TGG 0.481617 8_3:-3310763 None:intergenic
TGATGAAGAACAGGATAGTA+AGG 0.486091 8_3:+3312525 Msa1269970:three_prime_UTR
GTGATCGATATGCTCTTCTC+TGG 0.488861 8_3:+3305079 Msa1269970:CDS
TGGAGAAAGAGGAGGAGTGA+AGG 0.493800 8_3:-3304539 None:intergenic
TGGAAGCTATAAACTGATAT+GGG 0.497013 8_3:+3311784 Msa1269970:CDS
ACGGAAAATTGAATATTGTC+AGG 0.498862 8_3:-3304847 None:intergenic
GGATAGTAAGGATAGTAAGA+AGG 0.502124 8_3:+3312537 Msa1269970:three_prime_UTR
ATGATAATGAAAGGAAGAAT+CGG 0.504065 8_3:-3307171 None:intergenic
CAATTGATTTCTATGAAGGA+AGG 0.504987 8_3:+3312374 Msa1269970:three_prime_UTR
GGCATGAGTAATTAGAACTT+CGG 0.505469 8_3:-3312335 None:intergenic
TGAGAGACGTCTGGAGAAAG+AGG 0.507695 8_3:-3304550 None:intergenic
GAACTGGATAACGGAGAAGA+AGG 0.512278 8_3:-3311533 None:intergenic
GAAGAAAAGAAAGGGAGAGG+TGG 0.512449 8_3:+3304402 Msa1269970:five_prime_UTR
TAGTACGAAGCAGAGAAGTA+AGG 0.514503 8_3:-3304573 None:intergenic
GAGGAATAAGCAAGCAGAGG+TGG 0.517070 8_3:+3305026 Msa1269970:CDS
AATTTCTGCACATTAATGGC+TGG 0.520564 8_3:+3311764 Msa1269970:CDS
TAGGAAGCCAACTGTTGTAA+TGG 0.521221 8_3:+3312477 Msa1269970:three_prime_UTR
ATTGAGGTGAGGCTGTATAA+TGG 0.524864 8_3:-3307136 None:intergenic
CCGATGGCTGCTTCTACAGA+GGG 0.525140 8_3:+3304466 Msa1269970:exon
GAGGAGCAGCGTCATCGCTA+TGG 0.528258 8_3:+3307109 Msa1269970:CDS
CAGTAAACTCGTATATTGCA+TGG 0.528695 8_3:+3311211 Msa1269970:CDS
CGATGACGCTGCTCCTCCAT+GGG 0.529566 8_3:-3307103 None:intergenic
AAAGAGATAAGTGTTCCAGC+TGG 0.530707 8_3:+3310883 Msa1269970:CDS
TGGAGTTTGCAAGTCCTACC+GGG 0.533936 8_3:+3311381 Msa1269970:CDS
TCTTCTCTGGAAACAACAAA+TGG 0.535849 8_3:+3305092 Msa1269970:CDS
ATATCAGGTTATACTTTCAG+TGG 0.541751 8_3:+3311185 Msa1269970:intron
ATGGGCGATGAAGATTGATA+AGG 0.542844 8_3:-3311477 None:intergenic
TCTATGAAGGAAGGGATAGG+AGG 0.544149 8_3:+3312383 Msa1269970:three_prime_UTR
AGAAGGCCTCTGCATTATGC+AGG 0.549229 8_3:+3312271 Msa1269970:three_prime_UTR
CTTATCTACTGGTAGGCCCA+TGG 0.549474 8_3:+3307087 Msa1269970:intron
CATGATACAGAACTGGATAA+CGG 0.550313 8_3:-3311542 None:intergenic
GGCAGATTAATGACGATGAC+GGG 0.550469 8_3:+3306964 Msa1269970:CDS
TCAGACTCGTATCGGCGGTA+AGG 0.558609 8_3:-3311642 None:intergenic
ATTTCTATGAAGGAAGGGAT+AGG 0.559182 8_3:+3312380 Msa1269970:three_prime_UTR
GGGTTTGGTGCCCATAACTA+GGG 0.559944 8_3:+3304486 Msa1269970:CDS
GAGAAAGAGGAGGAGTGAAG+GGG 0.566570 8_3:-3304537 None:intergenic
ACATCTGCTGGAATGAAGAA+AGG 0.566781 8_3:-3310751 None:intergenic
AGAAGGCAATTAGCTCAGCT+TGG 0.567507 8_3:+3305120 Msa1269970:CDS
AGCGTTCGCGTTGTTGTCTG+AGG 0.569416 8_3:-3304999 None:intergenic
TCCTCTGATTCCGATTCCGA+TGG 0.570194 8_3:+3304450 Msa1269970:exon
AATTGATTTCTATGAAGGAA+GGG 0.572013 8_3:+3312375 Msa1269970:three_prime_UTR
TATAATGACTGTAGGTGCTA+CGG 0.577224 8_3:+3312183 Msa1269970:intron
TCTGGAAACAACAAATGGAA+AGG 0.577715 8_3:+3305097 Msa1269970:CDS
CTCCAACAAGGTACTTGACG+AGG 0.578652 8_3:-3305167 None:intergenic
AAGAGATAAGTGTTCCAGCT+GGG 0.581420 8_3:+3310884 Msa1269970:CDS
ATCGTGCCCATGATAATGAA+AGG 0.583994 8_3:-3307180 None:intergenic
GATTGACTAATAACTGAGCA+TGG 0.584896 8_3:+3304285 Msa1269970:five_prime_UTR
AACAACAAATGGAAAGGAGA+AGG 0.585723 8_3:+3305103 Msa1269970:CDS
ATAGGAGGTGTAAAGGAGCT+GGG 0.592784 8_3:+3312398 Msa1269970:three_prime_UTR
AGCAGATGTTGCTGGTGCAG+TGG 0.597546 8_3:+3310765 Msa1269970:CDS
AAATTGAATATTGTCAGGTG+TGG 0.598417 8_3:-3304842 None:intergenic
GTTTGTCGTAGTAAGACGAC+AGG 0.600262 8_3:-3304513 None:intergenic
AGTAAACTCGTATATTGCAT+GGG 0.604344 8_3:+3311212 Msa1269970:CDS
AGAGAAGAGCATATCGATCA+CGG 0.605518 8_3:-3305077 None:intergenic
TAACTTGGTCAGACTCGTAT+CGG 0.609024 8_3:-3311650 None:intergenic
TCTACACTATGGAGTTTGAG+AGG 0.613870 8_3:+3308890 Msa1269970:CDS
CCCTCTGTAGAAGCAGCCAT+CGG 0.614975 8_3:-3304466 None:intergenic
GCCATCGGAATCGGAATCAG+AGG 0.615916 8_3:-3304451 None:intergenic
GTACCTTGTTGGAGTTCCTG+AGG 0.616247 8_3:+3305176 Msa1269970:CDS
AAGGAAGAGAATATTCGAGA+GGG 0.616973 8_3:+3304332 Msa1269970:five_prime_UTR
AAAGGAAGAGAATATTCGAG+AGG 0.617206 8_3:+3304331 Msa1269970:five_prime_UTR
AGGCAGATTAATGACGATGA+CGG 0.621786 8_3:+3306963 Msa1269970:CDS
ACAATCTAATTGGCCAGACA+CGG 0.626292 8_3:+3304714 Msa1269970:CDS
AACTGGATAACGGAGAAGAA+GGG 0.635687 8_3:-3311532 None:intergenic
GGCACTGGCTCTGCAACAGG+AGG 0.638970 8_3:-3312224 None:intergenic
ATAAGATTGATGAAAACATG+TGG 0.639942 8_3:+3304650 Msa1269970:CDS
ATCATCAATTCCCAAATCAG+TGG 0.640263 8_3:-3304599 None:intergenic
ATATTAATTTGTCAGAAAAG+GGG 0.642676 8_3:+3308834 Msa1269970:intron
AGAGAGGAATAAGCAAGCAG+AGG 0.647377 8_3:+3305023 Msa1269970:CDS
TCGGACAGAAAGAATCATTG+AGG 0.651275 8_3:-3307152 None:intergenic
CAGAAAGAATCATTGAGGTG+AGG 0.658338 8_3:-3307147 None:intergenic
GAGACGTCTGGAGAAAGAGG+AGG 0.662195 8_3:-3304547 None:intergenic
TAGTCAATCTCGATAATTAG+GGG 0.662872 8_3:-3304271 None:intergenic
GTCGTAGTAAGACGACAGGA+AGG 0.670921 8_3:-3304509 None:intergenic
TCCAACAAGGTACTTGACGA+GGG 0.671006 8_3:-3305166 None:intergenic
AGGTATCCTGCATAATGCAG+AGG 0.680243 8_3:-3312277 None:intergenic
AGAGTTCCTCGAAAATCTTG+TGG 0.681900 8_3:-3304976 None:intergenic
AACAACGCGAACGCTCAGAG+AGG 0.685075 8_3:+3305007 Msa1269970:CDS
CTTGGTCAGACTCGTATCGG+CGG 0.685715 8_3:-3311647 None:intergenic
GGAGTTTGCAAGTCCTACCG+GGG 0.692066 8_3:+3311382 Msa1269970:CDS
GATTTGGAAAGATTCCAAAG+TGG 0.692886 8_3:-3304911 None:intergenic
ATCTACTGGTAGGCCCATGG+AGG 0.694772 8_3:+3307090 Msa1269970:intron
TCGAGAGGGATCGATGAATG+GGG 0.698183 8_3:+3304346 Msa1269970:five_prime_UTR
ATACCTCAGGAACTCCAACA+AGG 0.706412 8_3:-3305179 None:intergenic
GAGGTGAGGCTGTATAATGG+TGG 0.725726 8_3:-3307133 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATAAAGAAGAA+AGG - chr8_3:3307021-3307040 None:intergenic 10.0%
!!! TACTTTTCTTTTTAAAATTA+AGG - chr8_3:3307618-3307637 None:intergenic 10.0%
!!! CTTATTTTTCTTTTTTATTA+GGG + chr8_3:3307692-3307711 Msa1269970:intron 10.0%
!!! TTTTTTTTTTTTGTGAATAT+TGG + chr8_3:3309096-3309115 Msa1269970:intron 10.0%
!!! TTAGTTCTTTTATAAAATTT+GGG + chr8_3:3309287-3309306 Msa1269970:intron 10.0%
!!! TTATTCAATGAATAAAATTT+TGG - chr8_3:3310479-3310498 None:intergenic 10.0%
!!! TTTTTTTGTAATGTAATTTT+AGG + chr8_3:3311739-3311758 Msa1269970:intron 10.0%
!!! TTTTTTGTAATGTAATTTTA+GGG + chr8_3:3311740-3311759 Msa1269970:intron 10.0%
!! ATATATTGATGAATTTAAAT+CGG + chr8_3:3311933-3311952 Msa1269970:intron 10.0%
!! ACAAAGAGAATAAAAAAAAA+AGG + chr8_3:3304313-3304332 Msa1269970:five_prime_UTR 15.0%
!!! CTGAAAATTCTAATTTTATA+TGG - chr8_3:3306034-3306053 None:intergenic 15.0%
!!! GATCTTTTTATGTATTTTTA+TGG - chr8_3:3306165-3306184 None:intergenic 15.0%
!! CAAATAAATATCAAAATCAT+TGG - chr8_3:3307503-3307522 None:intergenic 15.0%
!!! GCTTATTTTTCTTTTTTATT+AGG + chr8_3:3307691-3307710 Msa1269970:intron 15.0%
!!! GCTTATTTTTCTTTTTTATT+AGG + chr8_3:3307691-3307710 Msa1269970:intron 15.0%
!!! TTTTTCTTTTTTATTAGGAA+TGG + chr8_3:3307889-3307908 Msa1269970:intron 15.0%
!!! AAGATTTTATTTTTCTTCAT+TGG - chr8_3:3308098-3308117 None:intergenic 15.0%
!! TTATATTGAAAAAAAACCTT+GGG - chr8_3:3308217-3308236 None:intergenic 15.0%
!!! GTTATCTTTTATTTTTGTTT+TGG + chr8_3:3308599-3308618 Msa1269970:intron 15.0%
!!! GTTAGTTCTTTTATAAAATT+TGG + chr8_3:3309286-3309305 Msa1269970:intron 15.0%
!! ATTAACAACATAGATAAAAT+TGG - chr8_3:3309910-3309929 None:intergenic 15.0%
!! TAGAAGATTTAGAAATTTAT+AGG + chr8_3:3310345-3310364 Msa1269970:intron 15.0%
!!! ATTACAAAAAAATTTAAGAC+GGG - chr8_3:3311731-3311750 None:intergenic 15.0%
!! CATTACAAAAAAATTTAAGA+CGG - chr8_3:3311732-3311751 None:intergenic 15.0%
!!! TTTTTGTAATGTAATTTTAG+GGG + chr8_3:3311741-3311760 Msa1269970:intron 15.0%
!! TATATTGATGAATTTAAATC+GGG + chr8_3:3311934-3311953 Msa1269970:intron 15.0%
!! AGATTGTTGAAGTAAAAAAA+TGG - chr8_3:3304701-3304720 None:intergenic 20.0%
!!! TTTTACTTCAACAATCTAAT+TGG + chr8_3:3304704-3304723 Msa1269970:CDS 20.0%
!!! GATACATTTTACATAGAAAT+AGG - chr8_3:3305261-3305280 None:intergenic 20.0%
!! ACATTAAATCTAATGAAGAA+TGG - chr8_3:3305329-3305348 None:intergenic 20.0%
!!! TCATAGTAGTTTTAAAATCA+GGG + chr8_3:3305635-3305654 Msa1269970:intron 20.0%
!!! TTATCCATTATTTAGTTTCA+AGG - chr8_3:3305755-3305774 None:intergenic 20.0%
!!! ATTGTTTTGTTTTGAGTTTT+TGG - chr8_3:3306091-3306110 None:intergenic 20.0%
!! AAAAACTCAAAACAAAACAA+TGG + chr8_3:3306090-3306109 Msa1269970:intron 20.0%
!! TAAAAACTTCAAAATTTCGT+GGG - chr8_3:3306347-3306366 None:intergenic 20.0%
!! TTAAAAACTTCAAAATTTCG+TGG - chr8_3:3306348-3306367 None:intergenic 20.0%
!!! AATTTTGAAGTTTTTAAACC+AGG + chr8_3:3306351-3306370 Msa1269970:intron 20.0%
!!! ATTTTGAAGTTTTTAAACCA+GGG + chr8_3:3306352-3306371 Msa1269970:intron 20.0%
!! TATGGTAATTAGAATGTATT+TGG + chr8_3:3306666-3306685 Msa1269970:intron 20.0%
!! ATTTATCATAAGTATCACAT+GGG - chr8_3:3306824-3306843 None:intergenic 20.0%
!! AATTTATCATAAGTATCACA+TGG - chr8_3:3306825-3306844 None:intergenic 20.0%
!!! TTTTCTTTTTTATTAGGGAA+TGG + chr8_3:3307697-3307716 Msa1269970:intron 20.0%
!!! TTTCTTTTTTATTAGGGAAT+GGG + chr8_3:3307698-3307717 Msa1269970:intron 20.0%
!!! CAAAAATACTTTTCCAAAAA+AGG - chr8_3:3307752-3307771 None:intergenic 20.0%
!! GTTATATTGAAAAAAAACCT+TGG - chr8_3:3308218-3308237 None:intergenic 20.0%
!! TCAACATATTCACTAATAAT+GGG - chr8_3:3308404-3308423 None:intergenic 20.0%
!!! TTTATGGTTAGAAGATTTTA+GGG + chr8_3:3308519-3308538 Msa1269970:intron 20.0%
!!! CATATTAATTTGTCAGAAAA+GGG + chr8_3:3308833-3308852 Msa1269970:intron 20.0%
!!! ATATTAATTTGTCAGAAAAG+GGG + chr8_3:3308834-3308853 Msa1269970:intron 20.0%
!!! TGGTTTTTATGCAAAATTTA+TGG + chr8_3:3309116-3309135 Msa1269970:intron 20.0%
!!! TTCTTTTATAAAATTTGGGT+TGG + chr8_3:3309291-3309310 Msa1269970:intron 20.0%
!! AAGAAATAGATGATATTAAG+AGG + chr8_3:3309777-3309796 Msa1269970:intron 20.0%
!! AGAAATAGATGATATTAAGA+GGG + chr8_3:3309778-3309797 Msa1269970:intron 20.0%
!! GAATGATAAATTAATGCTTA+TGG - chr8_3:3309962-3309981 None:intergenic 20.0%
!! GACAATATCAAATAATTCAA+CGG - chr8_3:3310303-3310322 None:intergenic 20.0%
!!! ATAACTTCCTAATTTTGAAT+TGG + chr8_3:3310495-3310514 Msa1269970:intron 20.0%
!! AAAAAGAAGTTTAGTATAGA+AGG - chr8_3:3311333-3311352 None:intergenic 20.0%
!!! ACTTCTTTTTGTTTATTGTT+AGG + chr8_3:3311343-3311362 Msa1269970:intron 20.0%
!! TTTGTTTATTGTTAGGATAT+TGG + chr8_3:3311350-3311369 Msa1269970:intron 20.0%
!! AAGAGATTGAAGATAAAAAT+GGG - chr8_3:3311498-3311517 None:intergenic 20.0%
!! TAAGAGATTGAAGATAAAAA+TGG - chr8_3:3311499-3311518 None:intergenic 20.0%
!!! ATTTTTATCTTCAATCTCTT+AGG + chr8_3:3311498-3311517 Msa1269970:CDS 20.0%
!!! ACATTCAACTTTTTTTAGAA+AGG + chr8_3:3311814-3311833 Msa1269970:CDS 20.0%
!!! ATACAAATATGCTGATTAAT+TGG + chr8_3:3311906-3311925 Msa1269970:intron 20.0%
!!! TACAAATATGCTGATTAATT+GGG + chr8_3:3311907-3311926 Msa1269970:intron 20.0%
!! ATAGAAGAAACACATATAAT+AGG - chr8_3:3311997-3312016 None:intergenic 20.0%
!! AAAATTACTAGTACATCAAT+AGG - chr8_3:3312300-3312319 None:intergenic 20.0%
!!! CAATTGACAATTTTATACAA+AGG - chr8_3:3312436-3312455 None:intergenic 20.0%
!! TGTATAAAATTGTCAATTGT+AGG + chr8_3:3312437-3312456 Msa1269970:three_prime_UTR 20.0%
!! GTATAAAATTGTCAATTGTA+GGG + chr8_3:3312438-3312457 Msa1269970:three_prime_UTR 20.0%
! TTAGTCAATCTCGATAATTA+GGG - chr8_3:3304275-3304294 None:intergenic 25.0%
! ATTAGTCAATCTCGATAATT+AGG - chr8_3:3304276-3304295 None:intergenic 25.0%
!! ATGTTTTCATCAATCTTATG+TGG - chr8_3:3304649-3304668 None:intergenic 25.0%
! ATAAGATTGATGAAAACATG+TGG + chr8_3:3304650-3304669 Msa1269970:CDS 25.0%
! AAGAGAATGAAAATGGAAAA+TGG - chr8_3:3304755-3304774 None:intergenic 25.0%
! TCTGTTAAAGAGAATGAAAA+TGG - chr8_3:3304762-3304781 None:intergenic 25.0%
!! ATTCAATTTTCCGTTATTCT+TGG + chr8_3:3304856-3304875 Msa1269970:CDS 25.0%
!! TTCAATTTTCCGTTATTCTT+GGG + chr8_3:3304857-3304876 Msa1269970:CDS 25.0%
! CAAATTCAATATTGTTCAAG+AGG - chr8_3:3305364-3305383 None:intergenic 25.0%
!! TAATGGAGTTTTCATCTATT+AGG - chr8_3:3305453-3305472 None:intergenic 25.0%
! TACAACTAGTTACATACTAA+TGG - chr8_3:3305470-3305489 None:intergenic 25.0%
! ATTAGTATGTAACTAGTTGT+AGG + chr8_3:3305469-3305488 Msa1269970:intron 25.0%
! TTAGTATGTAACTAGTTGTA+GGG + chr8_3:3305470-3305489 Msa1269970:intron 25.0%
!!! GTCATAGTAGTTTTAAAATC+AGG + chr8_3:3305634-3305653 Msa1269970:intron 25.0%
! AACAAAACTAAATTAGTTGC+AGG + chr8_3:3305776-3305795 Msa1269970:intron 25.0%
! GAATGCAATATTTGAATAAC+AGG + chr8_3:3305808-3305827 Msa1269970:intron 25.0%
! CAGACTAAGTTTATATTACA+AGG - chr8_3:3305851-3305870 None:intergenic 25.0%
! GAAAAAATGAGGTCAAAAAT+AGG - chr8_3:3305935-3305954 None:intergenic 25.0%
! CTAAACATGAATGCAAAAAA+TGG - chr8_3:3305993-3306012 None:intergenic 25.0%
!!! CATTTTTTGCATTCATGTTT+AGG + chr8_3:3305991-3306010 Msa1269970:intron 25.0%
!! TAGAATTTTCAGACAAAAGA+TGG + chr8_3:3306042-3306061 Msa1269970:intron 25.0%
!! CAGCTCAAAATTTGATTTAT+AGG - chr8_3:3306125-3306144 None:intergenic 25.0%
!!! ATTGCAAATTTTGAAACTTG+TGG - chr8_3:3306240-3306259 None:intergenic 25.0%
! TAACCATGCAAACAAAATTA+TGG - chr8_3:3306304-3306323 None:intergenic 25.0%
!!! ATTCATAATTAATTTGTCCC+TGG - chr8_3:3306372-3306391 None:intergenic 25.0%
! TAGTTATTGCAAGAATTTAC+AGG - chr8_3:3306429-3306448 None:intergenic 25.0%
! ATTATGTAGATAATGCATCT+AGG + chr8_3:3306618-3306637 Msa1269970:intron 25.0%
!! ATGATAATGAAAGGAAGAAT+CGG - chr8_3:3307174-3307193 None:intergenic 25.0%
! ATTCTTCCTTTCATTATCAT+GGG + chr8_3:3307174-3307193 Msa1269970:CDS 25.0%
!! TATTCAAATGAACGGTTTTA+GGG - chr8_3:3307432-3307451 None:intergenic 25.0%
!! TTATTCAAATGAACGGTTTT+AGG - chr8_3:3307433-3307452 None:intergenic 25.0%
!! TACTTTTCCAAAAAAAGTGA+AGG - chr8_3:3307929-3307948 None:intergenic 25.0%
!! ATCTTCTCCTTGTATATTTT+TGG + chr8_3:3308045-3308064 Msa1269970:intron 25.0%
! GATCAATTATAATAGACGTA+CGG + chr8_3:3308294-3308313 Msa1269970:intron 25.0%
! CTCAACATATTCACTAATAA+TGG - chr8_3:3308405-3308424 None:intergenic 25.0%
! TTCAGGATAAGTTATGTTTA+TGG + chr8_3:3308503-3308522 Msa1269970:intron 25.0%
!! GTTTATGGTTAGAAGATTTT+AGG + chr8_3:3308518-3308537 Msa1269970:intron 25.0%
!! TTATGGTTAGAAGATTTTAG+GGG + chr8_3:3308520-3308539 Msa1269970:intron 25.0%
!!! GCATATTAATTTGTCAGAAA+AGG + chr8_3:3308832-3308851 Msa1269970:intron 25.0%
! GAAATAGATGATATTAAGAG+GGG + chr8_3:3309779-3309798 Msa1269970:intron 25.0%
! GAACTAAAAAATTGTATTGG+AGG + chr8_3:3309855-3309874 Msa1269970:intron 25.0%
! TAAAAAATTGTATTGGAGGA+GGG + chr8_3:3309859-3309878 Msa1269970:intron 25.0%
! TATACAAGTCTCAATGAAAT+TGG - chr8_3:3310092-3310111 None:intergenic 25.0%
! TTGTATAATGTAAGATCCAA+TGG + chr8_3:3310105-3310124 Msa1269970:intron 25.0%
! TATCATATTATAGAAAGTCG+TGG + chr8_3:3310407-3310426 Msa1269970:intron 25.0%
! AAAAGGATGAATTTGAATAG+TGG - chr8_3:3310844-3310863 None:intergenic 25.0%
!! TATTCAAATTCATCCTTTTC+AGG + chr8_3:3310845-3310864 Msa1269970:intron 25.0%
! TCTAGATTATGCATACAATA+AGG - chr8_3:3311038-3311057 None:intergenic 25.0%
! TATGATGATCTTTGAATATC+AGG + chr8_3:3311170-3311189 Msa1269970:intron 25.0%
! TTAGTATAGAAGGATATCTT+AGG - chr8_3:3311323-3311342 None:intergenic 25.0%
! TTAGGATATTGGATTTAGTT+TGG + chr8_3:3311361-3311380 Msa1269970:intron 25.0%
! TTCCTTATTGTACTCTAATT+TGG + chr8_3:3311432-3311451 Msa1269970:CDS 25.0%
! AACCAAATTAGAGTACAATA+AGG - chr8_3:3311437-3311456 None:intergenic 25.0%
! AAAAATGGCAAAACAAACAT+GGG - chr8_3:3311582-3311601 None:intergenic 25.0%
! AAAAAATGGCAAAACAAACA+TGG - chr8_3:3311583-3311602 None:intergenic 25.0%
!!! TTTGCCATTTTTTATTCTCA+TGG + chr8_3:3311590-3311609 Msa1269970:intron 25.0%
!! TTTCTTCTATTGTTACGTTT+TGG + chr8_3:3312007-3312026 Msa1269970:intron 25.0%
! TGTTATTGTATAATGACTGT+AGG + chr8_3:3312175-3312194 Msa1269970:intron 25.0%
!! TGTTCAATTGATTTCTATGA+AGG + chr8_3:3312370-3312389 Msa1269970:three_prime_UTR 25.0%
!! AATTGATTTCTATGAAGGAA+GGG + chr8_3:3312375-3312394 Msa1269970:three_prime_UTR 25.0%
!!! AATTGTAGGGTTTTATATTG+TGG + chr8_3:3312451-3312470 Msa1269970:three_prime_UTR 25.0%
!!! TTTTTTACCATTACAACAGT+TGG - chr8_3:3312487-3312506 None:intergenic 25.0%
TAGTCAATCTCGATAATTAG+GGG - chr8_3:3304274-3304293 None:intergenic 30.0%
AGAGAAGAAGAAGAAAAGAA+AGG + chr8_3:3304393-3304412 Msa1269970:five_prime_UTR 30.0%
GAGAAGAAGAAGAAAAGAAA+GGG + chr8_3:3304394-3304413 Msa1269970:five_prime_UTR 30.0%
! TTTTCATCAATCTTATGTGG+AGG - chr8_3:3304646-3304665 None:intergenic 30.0%
ATGAAAATGGAAAATGGATC+TGG - chr8_3:3304749-3304768 None:intergenic 30.0%
AAATTGAATATTGTCAGGTG+TGG - chr8_3:3304845-3304864 None:intergenic 30.0%
ACGGAAAATTGAATATTGTC+AGG - chr8_3:3304850-3304869 None:intergenic 30.0%
!! CATGATCAGCATTTTTGATT+TGG - chr8_3:3304930-3304949 None:intergenic 30.0%
!! ATCTAATGAAGAATGGATTG+TGG - chr8_3:3305322-3305341 None:intergenic 30.0%
AACGATTTCTTCTATTTGTG+TGG + chr8_3:3305426-3305445 Msa1269970:intron 30.0%
AACTTTACCATCTCAAAATC+CGG + chr8_3:3305519-3305538 Msa1269970:intron 30.0%
GGATATCATTAATGAGAAGT+GGG - chr8_3:3305725-3305744 None:intergenic 30.0%
TTCAGATATTGCATTCTTCA+GGG - chr8_3:3305904-3305923 None:intergenic 30.0%
TATGTCTACAGGAAAAAATG+AGG - chr8_3:3305946-3305965 None:intergenic 30.0%
TTTCTAGACTTTATGTCTAC+AGG - chr8_3:3305957-3305976 None:intergenic 30.0%
AAATTTGACCAGTGAGTATA+TGG - chr8_3:3306277-3306296 None:intergenic 30.0%
!! GTTCCATAATTTTGTTTGCA+TGG + chr8_3:3306298-3306317 Msa1269970:intron 30.0%
! AAACATGGAGTTTTTGTTGA+TGG - chr8_3:3306490-3306509 None:intergenic 30.0%
AATGATATTGCATCGAAACA+TGG - chr8_3:3306505-3306524 None:intergenic 30.0%
ATTATGCAGATAATGCAACT+AGG - chr8_3:3306556-3306575 None:intergenic 30.0%
ATTATCTGCATAATGCAACT+AGG + chr8_3:3306562-3306581 Msa1269970:intron 30.0%
CAACTAGGATATCTATACTA+TGG + chr8_3:3306577-3306596 Msa1269970:intron 30.0%
GCATTATCTACATAATGCAA+GGG - chr8_3:3306614-3306633 None:intergenic 30.0%
TGCATTATCTACATAATGCA+AGG - chr8_3:3306615-3306634 None:intergenic 30.0%
TACTATTCACACTGCAATTA+TGG + chr8_3:3306648-3306667 Msa1269970:intron 30.0%
! GACTGTTCTATTTGAGTTAT+AGG + chr8_3:3306923-3306942 Msa1269970:intron 30.0%
!! AGGTATTGCTTGATTTTACA+AGG + chr8_3:3306943-3306962 Msa1269970:intron 30.0%
GATTCTTCCTTTCATTATCA+TGG + chr8_3:3307173-3307192 Msa1269970:CDS 30.0%
ATTAAAATACCAAAGATGCG+AGG - chr8_3:3307230-3307249 None:intergenic 30.0%
CAATTCAAAGATCACAGTTA+AGG - chr8_3:3307280-3307299 None:intergenic 30.0%
!! ATTCAAATGAACGGTTTTAG+GGG - chr8_3:3307431-3307450 None:intergenic 30.0%
AAACCGTTCATTTGAATAAC+TGG + chr8_3:3307434-3307453 Msa1269970:intron 30.0%
AACCGTTCATTTGAATAACT+GGG + chr8_3:3307435-3307454 Msa1269970:intron 30.0%
TACCCAGTTATTCAAATGAA+CGG - chr8_3:3307440-3307459 None:intergenic 30.0%
AATAACTGGGTAAAAAGTTG+TGG + chr8_3:3307448-3307467 Msa1269970:intron 30.0%
TATGGTTATGTTTAGATGGA+GGG - chr8_3:3307665-3307684 None:intergenic 30.0%
TCCATCTAAACATAACCATA+GGG + chr8_3:3307665-3307684 Msa1269970:intron 30.0%
! TACTTTTCCAAAAAAGGTGA+AGG - chr8_3:3307746-3307765 None:intergenic 30.0%
TATTAGGAATGGAAAGATAG+AGG + chr8_3:3307900-3307919 Msa1269970:intron 30.0%
TGGAACTCCAAAAATATACA+AGG - chr8_3:3308055-3308074 None:intergenic 30.0%
AAATAAAATCTTACGCACAG+TGG + chr8_3:3308106-3308125 Msa1269970:intron 30.0%
AATAAAATCTTACGCACAGT+GGG + chr8_3:3308107-3308126 Msa1269970:intron 30.0%
TTTCAATATAACGAGTAGCT+TGG + chr8_3:3308226-3308245 Msa1269970:intron 30.0%
AACATCCACTACTAATTGAT+TGG + chr8_3:3308465-3308484 Msa1269970:intron 30.0%
TAGTATCATAGAACTGATAG+AGG + chr8_3:3308548-3308567 Msa1269970:intron 30.0%
AGTATCATAGAACTGATAGA+GGG + chr8_3:3308549-3308568 Msa1269970:intron 30.0%
! GTTTGAATGTTACTTCATGA+TGG + chr8_3:3308650-3308669 Msa1269970:intron 30.0%
TCAATTATGAATTCCTCTAG+AGG - chr8_3:3308718-3308737 None:intergenic 30.0%
TCTAGAGGAATTCATAATTG+AGG + chr8_3:3308717-3308736 Msa1269970:intron 30.0%
CTAGAGGAATTCATAATTGA+GGG + chr8_3:3308718-3308737 Msa1269970:intron 30.0%
!! AATAATAATGCTCGAGTTGA+TGG + chr8_3:3308940-3308959 Msa1269970:intron 30.0%
TAATCTTGACCATCAATGTA+TGG - chr8_3:3309208-3309227 None:intergenic 30.0%
! CAAAACAGTTGATTTCTATC+TGG + chr8_3:3309264-3309283 Msa1269970:intron 30.0%
! ACAAATTAGTTTCATCACCT+TGG + chr8_3:3309342-3309361 Msa1269970:intron 30.0%
CAGTTACTACAACTCAAATT+AGG + chr8_3:3309500-3309519 Msa1269970:intron 30.0%
GGAGAAAATATTACCGATAT+TGG + chr8_3:3309647-3309666 Msa1269970:intron 30.0%
GAAAATATTACCGATATTGG+TGG + chr8_3:3309650-3309669 Msa1269970:intron 30.0%
ACGTGTTTATTAAGTCTCTT+AGG + chr8_3:3309693-3309712 Msa1269970:intron 30.0%
!!! TTAGGTTTTGTTTGCAAGTT+TGG + chr8_3:3309711-3309730 Msa1269970:intron 30.0%
AATACAAAACCCTCATCATT+TGG + chr8_3:3309831-3309850 Msa1269970:intron 30.0%
ATACAAAACCCTCATCATTT+GGG + chr8_3:3309832-3309851 Msa1269970:intron 30.0%
GGGGAACTAAAAAATTGTAT+TGG + chr8_3:3309852-3309871 Msa1269970:intron 30.0%
CTAAAAAATTGTATTGGAGG+AGG + chr8_3:3309858-3309877 Msa1269970:intron 30.0%
CAAATAATTCAACGGTAGAT+TGG - chr8_3:3310295-3310314 None:intergenic 30.0%
CATTGCACCAATTCAAAATT+AGG - chr8_3:3310505-3310524 None:intergenic 30.0%
!! TATTTTGAACCTAGTGTGAA+CGG + chr8_3:3310629-3310648 Msa1269970:intron 30.0%
!! TTGCTAGTAATTTTGATCAG+TGG + chr8_3:3310712-3310731 Msa1269970:intron 30.0%
!! TGCTAGTAATTTTGATCAGT+GGG + chr8_3:3310713-3310732 Msa1269970:intron 30.0%
!!! AATCGTCATTTTTCCTGAAA+AGG - chr8_3:3310861-3310880 None:intergenic 30.0%
!!! ACTTTTGAGGTATATTGACA+AGG + chr8_3:3310910-3310929 Msa1269970:intron 30.0%
! TTGTATGCATAATCTAGAGT+TGG + chr8_3:3311040-3311059 Msa1269970:intron 30.0%
ATATCAGGTTATACTTTCAG+TGG + chr8_3:3311185-3311204 Msa1269970:intron 30.0%
AGTAAACTCGTATATTGCAT+GGG + chr8_3:3311212-3311231 Msa1269970:CDS 30.0%
! TGGGATTTTTCTTTAGTACA+AGG + chr8_3:3311231-3311250 Msa1269970:CDS 30.0%
AGTACAAGGCAAGATAAATA+TGG + chr8_3:3311245-3311264 Msa1269970:CDS 30.0%
!!! TTTTTTTTGTGTGTGCGAAT+TGG + chr8_3:3311288-3311307 Msa1269970:intron 30.0%
AACAAAACATGATACAGAAC+TGG - chr8_3:3311552-3311571 None:intergenic 30.0%
ACCACCATGAGAATAAAAAA+TGG - chr8_3:3311597-3311616 None:intergenic 30.0%
TGGAAGCTATAAACTGATAT+GGG + chr8_3:3311784-3311803 Msa1269970:CDS 30.0%
AATAGGAACATATGCTATGA+AGG - chr8_3:3311980-3311999 None:intergenic 30.0%
! CAATTGATTTCTATGAAGGA+AGG + chr8_3:3312374-3312393 Msa1269970:three_prime_UTR 30.0%
! AAAAGCCTTTTCGTATGAAA+TGG + chr8_3:3312610-3312629 Msa1269970:three_prime_UTR 30.0%
! AAAGCCTTTTCGTATGAAAT+GGG + chr8_3:3312611-3312630 Msa1269970:three_prime_UTR 30.0%
GATTGACTAATAACTGAGCA+TGG + chr8_3:3304285-3304304 Msa1269970:five_prime_UTR 35.0%
AAAGGAAGAGAATATTCGAG+AGG + chr8_3:3304331-3304350 Msa1269970:five_prime_UTR 35.0%
AAGGAAGAGAATATTCGAGA+GGG + chr8_3:3304332-3304351 Msa1269970:five_prime_UTR 35.0%
ATCATCAATTCCCAAATCAG+TGG - chr8_3:3304602-3304621 None:intergenic 35.0%
ATCAATCTTATGTGGAGGTT+GGG - chr8_3:3304641-3304660 None:intergenic 35.0%
TTTGAGCTTCCCAAGAATAA+CGG - chr8_3:3304869-3304888 None:intergenic 35.0%
GATTTGGAAAGATTCCAAAG+TGG - chr8_3:3304914-3304933 None:intergenic 35.0%
! TATCTACCACAAGATTTTCG+AGG + chr8_3:3304970-3304989 Msa1269970:CDS 35.0%
! TCTTCTCTGGAAACAACAAA+TGG + chr8_3:3305092-3305111 Msa1269970:CDS 35.0%
TCTGGAAACAACAAATGGAA+AGG + chr8_3:3305097-3305116 Msa1269970:CDS 35.0%
AACAACAAATGGAAAGGAGA+AGG + chr8_3:3305103-3305122 Msa1269970:CDS 35.0%
TTCCTGAGGTATGTATCTAT+GGG + chr8_3:3305190-3305209 Msa1269970:intron 35.0%
AACTACTATGACGTCAAATG+TGG - chr8_3:3305626-3305645 None:intergenic 35.0%
GGGATATCATTAATGAGAAG+TGG - chr8_3:3305726-3305745 None:intergenic 35.0%
! ATTTAGTTTCAAGGCGCTAT+GGG - chr8_3:3305746-3305765 None:intergenic 35.0%
! TATTTAGTTTCAAGGCGCTA+TGG - chr8_3:3305747-3305766 None:intergenic 35.0%
AGCGCCTTGAAACTAAATAA+TGG + chr8_3:3305748-3305767 Msa1269970:intron 35.0%
CTTCAGATATTGCATTCTTC+AGG - chr8_3:3305905-3305924 None:intergenic 35.0%
TTTGAGCTGATTGTTTGTAG+AGG + chr8_3:3306136-3306155 Msa1269970:intron 35.0%
CGAAATGCTATGAAACTTTG+CGG - chr8_3:3306187-3306206 None:intergenic 35.0%
CCAGTGAGTATATGGTTATT+TGG - chr8_3:3306269-3306288 None:intergenic 35.0%
CCAAATAACCATATACTCAC+TGG + chr8_3:3306266-3306285 Msa1269970:intron 35.0%
AGCTATACTATGTAGGAACA+TGG - chr8_3:3306531-3306550 None:intergenic 35.0%
TACATAATGCAAGGGTTTGA+GGG - chr8_3:3306606-3306625 None:intergenic 35.0%
! ACTGTTTTGTCTTCTAGTAC+TGG + chr8_3:3306866-3306885 Msa1269970:intron 35.0%
TGTGTGTGAATAACAATCAC+AGG + chr8_3:3307058-3307077 Msa1269970:intron 35.0%
ACAGGATAACTCTTATCTAC+TGG + chr8_3:3307076-3307095 Msa1269970:intron 35.0%
GATAACTCTTATCTACTGGT+AGG + chr8_3:3307080-3307099 Msa1269970:intron 35.0%
!!! TTCAAATGAACGGTTTTAGG+GGG - chr8_3:3307430-3307449 None:intergenic 35.0%
TTATGTTTAGATGGAGGGTT+TGG - chr8_3:3307660-3307679 None:intergenic 35.0%
CTATGGTTATGTTTAGATGG+AGG - chr8_3:3307666-3307685 None:intergenic 35.0%
CTCCATCTAAACATAACCAT+AGG + chr8_3:3307664-3307683 Msa1269970:intron 35.0%
TCCCTATGGTTATGTTTAGA+TGG - chr8_3:3307669-3307688 None:intergenic 35.0%
ATCTAAACATAACCATAGGG+AGG + chr8_3:3307668-3307687 Msa1269970:intron 35.0%
TCTAAACATAACCATAGGGA+GGG + chr8_3:3307669-3307688 Msa1269970:intron 35.0%
TTATTAGGGAATGGGATGAA+TGG + chr8_3:3307706-3307725 Msa1269970:intron 35.0%
TCAAAATCTTCTCCCTGTAT+AGG + chr8_3:3307857-3307876 Msa1269970:intron 35.0%
CAAAATCTTCTCCCTGTATA+GGG + chr8_3:3307858-3307877 Msa1269970:intron 35.0%
!!! GAGGTATCCTTCACTTTTTT+TGG + chr8_3:3307919-3307938 Msa1269970:intron 35.0%
ATAAAATCTTACGCACAGTG+GGG + chr8_3:3308108-3308127 Msa1269970:intron 35.0%
AAACCAAATAGTTACCCCAA+TGG - chr8_3:3308352-3308371 None:intergenic 35.0%
ATTGGGGTAACTATTTGGTT+TGG + chr8_3:3308351-3308370 Msa1269970:intron 35.0%
! TTGGGGTAACTATTTGGTTT+GGG + chr8_3:3308352-3308371 Msa1269970:intron 35.0%
GGATGTTACATTCAACTAGT+TGG - chr8_3:3308452-3308471 None:intergenic 35.0%
CGAATCCAATCAATTAGTAG+TGG - chr8_3:3308473-3308492 None:intergenic 35.0%
CATGAAGTAACATTCAAACG+CGG - chr8_3:3308649-3308668 None:intergenic 35.0%
GTTTGATTCTATAGCAGTTG+TGG + chr8_3:3308750-3308769 Msa1269970:intron 35.0%
AGAGGTTCATCACATTTCTT+AGG + chr8_3:3308908-3308927 Msa1269970:CDS 35.0%
! CAACTGTTTTGTGAGAGATA+AGG - chr8_3:3309255-3309274 None:intergenic 35.0%
AAGTAATATCAAGCGCAGTT+TGG + chr8_3:3309314-3309333 Msa1269970:intron 35.0%
!! CATCTCCTAATTTGAGTTGT+TGG + chr8_3:3309365-3309384 Msa1269970:intron 35.0%
TTGGCGGTAATTTGATCAAA+TGG + chr8_3:3309384-3309403 Msa1269970:intron 35.0%
TGACAATTTGTGAACTGACA+TGG + chr8_3:3309471-3309490 Msa1269970:intron 35.0%
ACTCAAATTAGGAGATGTCA+AGG + chr8_3:3309511-3309530 Msa1269970:intron 35.0%
GTTGAAAGCAATATGTAGCT+TGG - chr8_3:3309559-3309578 None:intergenic 35.0%
GAACTTTATCTCTCACAAAG+TGG - chr8_3:3309622-3309641 None:intergenic 35.0%
GTGAGAGATAAAGTTCTTTC+AGG + chr8_3:3309626-3309645 Msa1269970:intron 35.0%
!!! GTTTTGTTTGCAAGTTTGGT+GGG + chr8_3:3309715-3309734 Msa1269970:intron 35.0%
!! TTTTGTTTGCAAGTTTGGTG+GGG + chr8_3:3309716-3309735 Msa1269970:intron 35.0%
TAGATGATATTAAGAGGGGA+AGG + chr8_3:3309783-3309802 Msa1269970:intron 35.0%
TACAAAACCCTCATCATTTG+GGG + chr8_3:3309833-3309852 Msa1269970:intron 35.0%
! TTTAGTTCCCCAAATGATGA+GGG - chr8_3:3309843-3309862 None:intergenic 35.0%
!!! TTTTAGTTCCCCAAATGATG+AGG - chr8_3:3309844-3309863 None:intergenic 35.0%
GGGGAAAATATAGGGAAAAT+TGG - chr8_3:3310026-3310045 None:intergenic 35.0%
CAGCTTATGGGGAAAATATA+GGG - chr8_3:3310034-3310053 None:intergenic 35.0%
TAATGTAAGATCCAATGGTC+AGG + chr8_3:3310110-3310129 Msa1269970:intron 35.0%
AAAGAGTAAATCCTGACCAT+TGG - chr8_3:3310124-3310143 None:intergenic 35.0%
! AGTTGATATGCACTTTGTGT+GGG - chr8_3:3310179-3310198 None:intergenic 35.0%
TAATCCTCTTCTCTCATTTC+AGG - chr8_3:3310205-3310224 None:intergenic 35.0%
AGAGAAGAGGATTAACTGTA+TGG + chr8_3:3310211-3310230 Msa1269970:intron 35.0%
ATGGTCAGATTAACTCTTCA+TGG + chr8_3:3310230-3310249 Msa1269970:intron 35.0%
!! GCTAGTAATTTTGATCAGTG+GGG + chr8_3:3310714-3310733 Msa1269970:intron 35.0%
ATCTGACTCAGATGTATTTG+TGG + chr8_3:3311098-3311117 Msa1269970:intron 35.0%
CAGTAAACTCGTATATTGCA+TGG + chr8_3:3311211-3311230 Msa1269970:CDS 35.0%
! AGAACTTACAATCTTTTCCC+CGG - chr8_3:3311402-3311421 None:intergenic 35.0%
ATGAAGATTGATAAGGCTTC+TGG - chr8_3:3311473-3311492 None:intergenic 35.0%
CATGATACAGAACTGGATAA+CGG - chr8_3:3311545-3311564 None:intergenic 35.0%
!!! GCCATTTTTTATTCTCATGG+TGG + chr8_3:3311593-3311612 Msa1269970:intron 35.0%
TTATTCTCATGGTGGTTGAT+TGG + chr8_3:3311601-3311620 Msa1269970:intron 35.0%
ACAAACATGACAGACTAACT+TGG - chr8_3:3311668-3311687 None:intergenic 35.0%
AATTTCTGCACATTAATGGC+TGG + chr8_3:3311764-3311783 Msa1269970:CDS 35.0%
CTGGAAGCTATAAACTGATA+TGG + chr8_3:3311783-3311802 Msa1269970:CDS 35.0%
TATTCAGTAATCAGTCCAAG+CGG - chr8_3:3311889-3311908 None:intergenic 35.0%
TCTCATTTGAAGGGTTAACT+TGG - chr8_3:3312056-3312075 None:intergenic 35.0%
AAGTTAACCCTTCAAATGAG+AGG + chr8_3:3312055-3312074 Msa1269970:intron 35.0%
TTCCCATTTGCATAGATCAT+TGG + chr8_3:3312102-3312121 Msa1269970:intron 35.0%
TATAATGACTGTAGGTGCTA+CGG + chr8_3:3312183-3312202 Msa1269970:intron 35.0%
! ACATTTTTGCATCAGTCGAA+TGG - chr8_3:3312248-3312267 None:intergenic 35.0%
TGATGCAAAAATGTCGTAGA+AGG + chr8_3:3312254-3312273 Msa1269970:exon 35.0%
GGCATGAGTAATTAGAACTT+CGG - chr8_3:3312338-3312357 None:intergenic 35.0%
AATTGAACACATCTCGATCT+TGG - chr8_3:3312359-3312378 None:intergenic 35.0%
ATTTCTATGAAGGAAGGGAT+AGG + chr8_3:3312380-3312399 Msa1269970:three_prime_UTR 35.0%
GTTCTTCATCAAGCAATATC+AGG - chr8_3:3312516-3312535 None:intergenic 35.0%
GATATTGCTTGATGAAGAAC+AGG + chr8_3:3312516-3312535 Msa1269970:three_prime_UTR 35.0%
TGATGAAGAACAGGATAGTA+AGG + chr8_3:3312525-3312544 Msa1269970:three_prime_UTR 35.0%
GGATAGTAAGGATAGTAAGA+AGG + chr8_3:3312537-3312556 Msa1269970:three_prime_UTR 35.0%
CAAAGAAAGATCACGAAGAA+TGG - chr8_3:3312577-3312596 None:intergenic 35.0%
! AAGCCTTTTCGTATGAAATG+GGG + chr8_3:3312612-3312631 Msa1269970:three_prime_UTR 35.0%
TTACCCCATTTCATACGAAA+AGG - chr8_3:3312618-3312637 None:intergenic 35.0%
GAAGAAGAAAAGAAAGGGAG+AGG + chr8_3:3304399-3304418 Msa1269970:five_prime_UTR 40.0%
AAGAAAAGAAAGGGAGAGGT+GGG + chr8_3:3304403-3304422 Msa1269970:five_prime_UTR 40.0%
TAGTACGAAGCAGAGAAGTA+AGG - chr8_3:3304576-3304595 None:intergenic 40.0%
! TCGTACTATGACCACTGATT+TGG + chr8_3:3304588-3304607 Msa1269970:CDS 40.0%
!! CGTACTATGACCACTGATTT+GGG + chr8_3:3304589-3304608 Msa1269970:CDS 40.0%
CATCAATCTTATGTGGAGGT+TGG - chr8_3:3304642-3304661 None:intergenic 40.0%
ACAATCTAATTGGCCAGACA+CGG + chr8_3:3304714-3304733 Msa1269970:CDS 40.0%
AGAGTTCCTCGAAAATCTTG+TGG - chr8_3:3304979-3304998 None:intergenic 40.0%
GTGGATGCTTTGGTAAATTC+TGG + chr8_3:3305045-3305064 Msa1269970:CDS 40.0%
! AGAGAAGAGCATATCGATCA+CGG - chr8_3:3305080-3305099 None:intergenic 40.0%
GTTCCTGAGGTATGTATCTA+TGG + chr8_3:3305189-3305208 Msa1269970:intron 40.0%
AACCCATAGATACATACCTC+AGG - chr8_3:3305195-3305214 None:intergenic 40.0%
TGGATTGTGGACAATGATGA+AGG - chr8_3:3305309-3305328 None:intergenic 40.0%
CATCTCAAAATCCGGATGAA+CGG + chr8_3:3305527-3305546 Msa1269970:intron 40.0%
AGTGGGATAAACAACTCCAT+AGG - chr8_3:3305708-3305727 None:intergenic 40.0%
TTCGTGGGTGAAGATTCTTA+TGG - chr8_3:3306332-3306351 None:intergenic 40.0%
!! CATGGAGTTTTTGTTGATGG+AGG - chr8_3:3306487-3306506 None:intergenic 40.0%
! CTAGGCTAGCTATACTATGT+AGG - chr8_3:3306538-3306557 None:intergenic 40.0%
CTACATAATGCAAGGGTTTG+AGG - chr8_3:3306607-3306626 None:intergenic 40.0%
AGGCAGATTAATGACGATGA+CGG + chr8_3:3306963-3306982 Msa1269970:CDS 40.0%
ATTGAGGTGAGGCTGTATAA+TGG - chr8_3:3307139-3307158 None:intergenic 40.0%
CAGAAAGAATCATTGAGGTG+AGG - chr8_3:3307150-3307169 None:intergenic 40.0%
TCGGACAGAAAGAATCATTG+AGG - chr8_3:3307155-3307174 None:intergenic 40.0%
! ATCGTGCCCATGATAATGAA+AGG - chr8_3:3307183-3307202 None:intergenic 40.0%
! GTGAAGAGCAAGTTTTCTGT+TGG + chr8_3:3307326-3307345 Msa1269970:intron 40.0%
TGGGTAAAAAGTTGTGGAAC+CGG + chr8_3:3307454-3307473 Msa1269970:intron 40.0%
AGAAAAATAAGCCCTCCCTA+TGG - chr8_3:3307683-3307702 None:intergenic 40.0%
TGGGATGAATGGAAAGATAG+AGG + chr8_3:3307717-3307736 Msa1269970:intron 40.0%
!!! GAGGTATCCTTCACCTTTTT+TGG + chr8_3:3307736-3307755 Msa1269970:intron 40.0%
AAATAAGCCCTCCCTATACA+GGG - chr8_3:3307872-3307891 None:intergenic 40.0%
AAAATAAGCCCTCCCTATAC+AGG - chr8_3:3307873-3307892 None:intergenic 40.0%
ATTAAACCCCTCTCATATGG+TGG - chr8_3:3308075-3308094 None:intergenic 40.0%
TGGATTAAACCCCTCTCATA+TGG - chr8_3:3308078-3308097 None:intergenic 40.0%
TAAAATCTTACGCACAGTGG+GGG + chr8_3:3308109-3308128 Msa1269970:intron 40.0%
GACAAAGGAAGGAGTGAAAA+GGG - chr8_3:3308150-3308169 None:intergenic 40.0%
!!! AGTGTTTTGAGGACAAAGGA+AGG - chr8_3:3308161-3308180 None:intergenic 40.0%
CTACTTCTGCAAATGCCATT+GGG + chr8_3:3308334-3308353 Msa1269970:intron 40.0%
TACTTCTGCAAATGCCATTG+GGG + chr8_3:3308335-3308354 Msa1269970:intron 40.0%
ATGCCATTGGGGTAACTATT+TGG + chr8_3:3308346-3308365 Msa1269970:intron 40.0%
ATCATAGAACTGATAGAGGG+AGG + chr8_3:3308552-3308571 Msa1269970:intron 40.0%
TCATAGAACTGATAGAGGGA+GGG + chr8_3:3308553-3308572 Msa1269970:intron 40.0%
ACTTCATGATGGTACAGAAC+TGG + chr8_3:3308661-3308680 Msa1269970:intron 40.0%
CTTCATGATGGTACAGAACT+GGG + chr8_3:3308662-3308681 Msa1269970:intron 40.0%
AGCTGTTGATGTCTACACTA+TGG + chr8_3:3308879-3308898 Msa1269970:CDS 40.0%
TCTACACTATGGAGTTTGAG+AGG + chr8_3:3308890-3308909 Msa1269970:CDS 40.0%
ACCATGCAACCATACATTGA+TGG + chr8_3:3309196-3309215 Msa1269970:intron 40.0%
ACCATCAATGTATGGTTGCA+TGG - chr8_3:3309200-3309219 None:intergenic 40.0%
ACTCAAATTAGGAGATGCCA+AGG - chr8_3:3309362-3309381 None:intergenic 40.0%
!! CTCCTAATTTGAGTTGTTGG+CGG + chr8_3:3309368-3309387 Msa1269970:intron 40.0%
TACCGCCAACAACTCAAATT+AGG - chr8_3:3309373-3309392 None:intergenic 40.0%
!! AGCAGAGTATTGTGCTATTG+TGG + chr8_3:3309448-3309467 Msa1269970:intron 40.0%
CTTTATCTCTCACAAAGTGG+CGG - chr8_3:3309619-3309638 None:intergenic 40.0%
ATCATTGGAGCCACCAATAT+CGG - chr8_3:3309663-3309682 None:intergenic 40.0%
CACGTCAACCATTAGATCAT+TGG - chr8_3:3309678-3309697 None:intergenic 40.0%
!!! GGTTTTGTTTGCAAGTTTGG+TGG + chr8_3:3309714-3309733 Msa1269970:intron 40.0%
ATATTAAGAGGGGAAGGCTT+TGG + chr8_3:3309789-3309808 Msa1269970:intron 40.0%
TATTAAGAGGGGAAGGCTTT+GGG + chr8_3:3309790-3309809 Msa1269970:intron 40.0%
! ATTGTATTGGAGGAGGGTTT+TGG + chr8_3:3309865-3309884 Msa1269970:intron 40.0%
CCAGCTTATGGGGAAAATAT+AGG - chr8_3:3310035-3310054 None:intergenic 40.0%
! CCTATATTTTCCCCATAAGC+TGG + chr8_3:3310032-3310051 Msa1269970:intron 40.0%
CTTGTTACAACCAGCTTATG+GGG - chr8_3:3310045-3310064 None:intergenic 40.0%
! GCTTGTTACAACCAGCTTAT+GGG - chr8_3:3310046-3310065 None:intergenic 40.0%
!! AGCTTGTTACAACCAGCTTA+TGG - chr8_3:3310047-3310066 None:intergenic 40.0%
TAAGCTGGTTGTAACAAGCT+TGG + chr8_3:3310047-3310066 Msa1269970:intron 40.0%
! CAGTTGATATGCACTTTGTG+TGG - chr8_3:3310180-3310199 None:intergenic 40.0%
AACAGATTTCCGTTCACACT+AGG - chr8_3:3310641-3310660 None:intergenic 40.0%
ACATCTGCTGGAATGAAGAA+AGG - chr8_3:3310754-3310773 None:intergenic 40.0%
AAAGAGATAAGTGTTCCAGC+TGG + chr8_3:3310883-3310902 Msa1269970:CDS 40.0%
AAGAGATAAGTGTTCCAGCT+GGG + chr8_3:3310884-3310903 Msa1269970:CDS 40.0%
ATGGGCGATGAAGATTGATA+AGG - chr8_3:3311480-3311499 None:intergenic 40.0%
!! AACTGGATAACGGAGAAGAA+GGG - chr8_3:3311535-3311554 None:intergenic 40.0%
TAACTTGGTCAGACTCGTAT+CGG - chr8_3:3311653-3311672 None:intergenic 40.0%
GCTTTACTAGACATCTGATG+TGG + chr8_3:3311700-3311719 Msa1269970:intron 40.0%
GGGGAATTTCTGCACATTAA+TGG + chr8_3:3311760-3311779 Msa1269970:intron 40.0%
AATTGTCTCATTATCCCGCT+TGG + chr8_3:3311871-3311890 Msa1269970:intron 40.0%
ATTCAGTAATCAGTCCAAGC+GGG - chr8_3:3311888-3311907 None:intergenic 40.0%
AGGAACATATGCTATGAAGG+TGG - chr8_3:3311977-3311996 None:intergenic 40.0%
ACCCTTCAAATGAGAGGAAA+AGG + chr8_3:3312061-3312080 Msa1269970:intron 40.0%
! GCCTTTTCCTCTCATTTGAA+GGG - chr8_3:3312065-3312084 None:intergenic 40.0%
! TGCCTTTTCCTCTCATTTGA+AGG - chr8_3:3312066-3312085 None:intergenic 40.0%
GGCCAATGATCTATGCAAAT+GGG - chr8_3:3312107-3312126 None:intergenic 40.0%
TGGCCAATGATCTATGCAAA+TGG - chr8_3:3312108-3312127 None:intergenic 40.0%
TTTGCATAGATCATTGGCCA+TGG + chr8_3:3312108-3312127 Msa1269970:intron 40.0%
TTTACAACATGCTGAGACCA+TGG - chr8_3:3312128-3312147 None:intergenic 40.0%
!! GGGTTTTATATTGTGGCTGT+AGG + chr8_3:3312458-3312477 Msa1269970:three_prime_UTR 40.0%
TAGGAAGCCAACTGTTGTAA+TGG + chr8_3:3312477-3312496 Msa1269970:three_prime_UTR 40.0%
ATTCGAGAGGGATCGATGAA+TGG + chr8_3:3304344-3304363 Msa1269970:five_prime_UTR 45.0%
TTCGAGAGGGATCGATGAAT+GGG + chr8_3:3304345-3304364 Msa1269970:five_prime_UTR 45.0%
GAAGAAAAGAAAGGGAGAGG+TGG + chr8_3:3304402-3304421 Msa1269970:five_prime_UTR 45.0%
GTTTGTCGTAGTAAGACGAC+AGG - chr8_3:3304516-3304535 None:intergenic 45.0%
CTGGATTACATTACCGTGTC+TGG - chr8_3:3304730-3304749 None:intergenic 45.0%
TCATCGCACTTTGACCACTT+TGG + chr8_3:3304897-3304916 Msa1269970:CDS 45.0%
AGAGAGGAATAAGCAAGCAG+AGG + chr8_3:3305023-3305042 Msa1269970:CDS 45.0%
GTGATCGATATGCTCTTCTC+TGG + chr8_3:3305079-3305098 Msa1269970:CDS 45.0%
AGAAGGCAATTAGCTCAGCT+TGG + chr8_3:3305120-3305139 Msa1269970:CDS 45.0%
! TCCAACAAGGTACTTGACGA+GGG - chr8_3:3305169-3305188 None:intergenic 45.0%
ATACCTCAGGAACTCCAACA+AGG - chr8_3:3305182-3305201 None:intergenic 45.0%
!! CGTTCATCCGGATTTTGAGA+TGG - chr8_3:3305529-3305548 None:intergenic 45.0%
! AGCTGGATTTTCCGTTCATC+CGG - chr8_3:3305541-3305560 None:intergenic 45.0%
TTGCGATTCATGTGCTTAGC+TGG - chr8_3:3305558-3305577 None:intergenic 45.0%
! GTGGACTATGTGACGTCAAA+TGG - chr8_3:3305607-3305626 None:intergenic 45.0%
TCAGGGCTGTAATGTAGCTA+AGG + chr8_3:3305652-3305671 Msa1269970:intron 45.0%
TCTCTTCATTCCTCCTTCCT+TGG + chr8_3:3306765-3306784 Msa1269970:intron 45.0%
GGCAGATTAATGACGATGAC+GGG + chr8_3:3306964-3306983 Msa1269970:CDS 45.0%
TGTGAGTTACCTCGCATCTT+TGG + chr8_3:3307218-3307237 Msa1269970:intron 45.0%
! ATTTGAAGCAGATGGCATGC+TGG - chr8_3:3307405-3307424 None:intergenic 45.0%
CATTGGAACAAGTGAACTGC+CGG - chr8_3:3307486-3307505 None:intergenic 45.0%
TTTGGAGGGAGAGATGGTAA+GGG - chr8_3:3307642-3307661 None:intergenic 45.0%
GTTTAGATGGAGGGTTTGGA+GGG - chr8_3:3307656-3307675 None:intergenic 45.0%
TGTTTAGATGGAGGGTTTGG+AGG - chr8_3:3307657-3307676 None:intergenic 45.0%
AATCTTCTCCCTGTATAGGG+AGG + chr8_3:3307861-3307880 Msa1269970:intron 45.0%
ATCTTCTCCCTGTATAGGGA+GGG + chr8_3:3307862-3307881 Msa1269970:intron 45.0%
TTGGAGTTCCACCATATGAG+AGG + chr8_3:3308064-3308083 Msa1269970:intron 45.0%
TGGAGTTCCACCATATGAGA+GGG + chr8_3:3308065-3308084 Msa1269970:intron 45.0%
GGACAAAGGAAGGAGTGAAA+AGG - chr8_3:3308151-3308170 None:intergenic 45.0%
TTTGTGACTCAGTTGGGACA+TGG - chr8_3:3308189-3308208 None:intergenic 45.0%
TCCCAACTGAGTCACAAACA+CGG + chr8_3:3308191-3308210 Msa1269970:intron 45.0%
CCAATGGCATTTGCAGAAGT+AGG - chr8_3:3308336-3308355 None:intergenic 45.0%
CCTACTTCTGCAAATGCCAT+TGG + chr8_3:3308333-3308352 Msa1269970:intron 45.0%
TTGATTGGATTCGAGCTGTC+AGG + chr8_3:3308480-3308499 Msa1269970:intron 45.0%
TGGTGGCTCCAATGATCTAA+TGG + chr8_3:3309667-3309686 Msa1269970:intron 45.0%
! TTTGCAAGTTTGGTGGGGAA+GGG + chr8_3:3309721-3309740 Msa1269970:intron 45.0%
ATTAAGAGGGGAAGGCTTTG+GGG + chr8_3:3309791-3309810 Msa1269970:intron 45.0%
!!! TATTGGAGGAGGGTTTTGGA+TGG + chr8_3:3309869-3309888 Msa1269970:intron 45.0%
TGAGCCTGAAATGAGAGAAG+AGG + chr8_3:3310198-3310217 Msa1269970:intron 45.0%
TTCATTCCAGCAGATGTTGC+TGG + chr8_3:3310757-3310776 Msa1269970:CDS 45.0%
TTGCTGGTGCAGTGGAAATA+AGG + chr8_3:3310773-3310792 Msa1269970:CDS 45.0%
! TCCAGCTGGGAAAACTTTTG+AGG + chr8_3:3310897-3310916 Msa1269970:CDS 45.0%
! ACCTCAAAAGTTTTCCCAGC+TGG - chr8_3:3310901-3310920 None:intergenic 45.0%
TGTCGCATGTTATGTGCAAC+AGG - chr8_3:3311007-3311026 None:intergenic 45.0%
TTGGAGTTTGCAAGTCCTAC+CGG + chr8_3:3311380-3311399 Msa1269970:CDS 45.0%
! CTTACAATCTTTTCCCCGGT+AGG - chr8_3:3311398-3311417 None:intergenic 45.0%
!! GAACTGGATAACGGAGAAGA+AGG - chr8_3:3311536-3311555 None:intergenic 45.0%
! ACTGTAGGTGCTACGGTATA+AGG + chr8_3:3312190-3312209 Msa1269970:intron 45.0%
AGGTATCCTGCATAATGCAG+AGG - chr8_3:3312280-3312299 None:intergenic 45.0%
TCTATGAAGGAAGGGATAGG+AGG + chr8_3:3312383-3312402 Msa1269970:three_prime_UTR 45.0%
! ATAGGAGGTGTAAAGGAGCT+GGG + chr8_3:3312398-3312417 Msa1269970:three_prime_UTR 45.0%
!!! AATAACTTTTAATAAATAAT+TGG + chr8_3:3310555-3310574 Msa1269970:intron 5.0%
TCGAGAGGGATCGATGAATG+GGG + chr8_3:3304346-3304365 Msa1269970:five_prime_UTR 50.0%
TCCTCTGATTCCGATTCCGA+TGG + chr8_3:3304450-3304469 Msa1269970:exon 50.0%
GTAGAAGCAGCCATCGGAAT+CGG - chr8_3:3304463-3304482 None:intergenic 50.0%
!! AGGGTTTGGTGCCCATAACT+AGG + chr8_3:3304485-3304504 Msa1269970:CDS 50.0%
!! GGGTTTGGTGCCCATAACTA+GGG + chr8_3:3304486-3304505 Msa1269970:CDS 50.0%
GACAGGAAGGCCCTAGTTAT+GGG - chr8_3:3304499-3304518 None:intergenic 50.0%
GTCGTAGTAAGACGACAGGA+AGG - chr8_3:3304512-3304531 None:intergenic 50.0%
GAGAAAGAGGAGGAGTGAAG+GGG - chr8_3:3304540-3304559 None:intergenic 50.0%
GGAGAAAGAGGAGGAGTGAA+GGG - chr8_3:3304541-3304560 None:intergenic 50.0%
TGGAGAAAGAGGAGGAGTGA+AGG - chr8_3:3304542-3304561 None:intergenic 50.0%
TGAGAGACGTCTGGAGAAAG+AGG - chr8_3:3304553-3304572 None:intergenic 50.0%
GAAGTAAGGTGAGAGACGTC+TGG - chr8_3:3304562-3304581 None:intergenic 50.0%
GAGGAATAAGCAAGCAGAGG+TGG + chr8_3:3305026-3305045 Msa1269970:CDS 50.0%
ACCCTCGTCAAGTACCTTGT+TGG + chr8_3:3305165-3305184 Msa1269970:CDS 50.0%
! CTCCAACAAGGTACTTGACG+AGG - chr8_3:3305170-3305189 None:intergenic 50.0%
GTACCTTGTTGGAGTTCCTG+AGG + chr8_3:3305176-3305195 Msa1269970:CDS 50.0%
TATCAGCCTGCAGCATGCAA+AGG + chr8_3:3305682-3305701 Msa1269970:intron 50.0%
TCAACCTAACTCTGCTGCCA+AGG - chr8_3:3306785-3306804 None:intergenic 50.0%
CTTATCTACTGGTAGGCCCA+TGG + chr8_3:3307087-3307106 Msa1269970:intron 50.0%
GAGGTGAGGCTGTATAATGG+TGG - chr8_3:3307136-3307155 None:intergenic 50.0%
! AGGGGGCTATTTGAAGCAGA+TGG - chr8_3:3307413-3307432 None:intergenic 50.0%
GTTGTGGAACCGGACAAAAC+CGG + chr8_3:3307464-3307483 Msa1269970:intron 50.0%
!!! AGTGAACTGCCGGTTTTGTC+CGG - chr8_3:3307476-3307495 None:intergenic 50.0%
GTTTGGAGGGAGAGATGGTA+AGG - chr8_3:3307643-3307662 None:intergenic 50.0%
GGAGTTCCACCATATGAGAG+GGG + chr8_3:3308066-3308085 Msa1269970:intron 50.0%
!!! GGGGAGTGTTTTGAGGACAA+AGG - chr8_3:3308165-3308184 None:intergenic 50.0%
!!! ACATGGAGGGGAGTGTTTTG+AGG - chr8_3:3308172-3308191 None:intergenic 50.0%
TGACTCAGTTGGGACATGGA+GGG - chr8_3:3308185-3308204 None:intergenic 50.0%
GCCGTGTTTGTGACTCAGTT+GGG - chr8_3:3308195-3308214 None:intergenic 50.0%
GCACAAAGAGAGACGACAGA+GGG - chr8_3:3308814-3308833 None:intergenic 50.0%
TGCACAAAGAGAGACGACAG+AGG - chr8_3:3308815-3308834 None:intergenic 50.0%
AGGGGAACAGTTAGCTGTCT+TGG + chr8_3:3308852-3308871 Msa1269970:CDS 50.0%
! GTTTGCAAGTTTGGTGGGGA+AGG + chr8_3:3309720-3309739 Msa1269970:intron 50.0%
GGGGAGGGGTTTGGAAAAAA+AGG + chr8_3:3309745-3309764 Msa1269970:intron 50.0%
! TTAAGAGGGGAAGGCTTTGG+GGG + chr8_3:3309792-3309811 Msa1269970:intron 50.0%
TGGAGTTTGCAAGTCCTACC+GGG + chr8_3:3311381-3311400 Msa1269970:CDS 50.0%
TTGCATCAGTCGAATGGCAC+TGG - chr8_3:3312242-3312261 None:intergenic 50.0%
AGAAGGCCTCTGCATTATGC+AGG + chr8_3:3312271-3312290 Msa1269970:three_prime_UTR 50.0%
! GGAAGGGATAGGAGGTGTAA+AGG + chr8_3:3312391-3312410 Msa1269970:three_prime_UTR 50.0%
! GATAGGAGGTGTAAAGGAGC+TGG + chr8_3:3312397-3312416 Msa1269970:three_prime_UTR 50.0%
GCCATCGGAATCGGAATCAG+AGG - chr8_3:3304454-3304473 None:intergenic 55.0%
TCCGATGGCTGCTTCTACAG+AGG + chr8_3:3304465-3304484 Msa1269970:exon 55.0%
CCCTCTGTAGAAGCAGCCAT+CGG - chr8_3:3304469-3304488 None:intergenic 55.0%
CCGATGGCTGCTTCTACAGA+GGG + chr8_3:3304466-3304485 Msa1269970:exon 55.0%
GGCTGCTTCTACAGAGGGTT+TGG + chr8_3:3304471-3304490 Msa1269970:CDS 55.0%
CGACAGGAAGGCCCTAGTTA+TGG - chr8_3:3304500-3304519 None:intergenic 55.0%
GAGACGTCTGGAGAAAGAGG+AGG - chr8_3:3304550-3304569 None:intergenic 55.0%
AGCGTTCGCGTTGTTGTCTG+AGG - chr8_3:3305002-3305021 None:intergenic 55.0%
AACAACGCGAACGCTCAGAG+AGG + chr8_3:3305007-3305026 Msa1269970:CDS 55.0%
GCAAGCAGAGGTGGATGCTT+TGG + chr8_3:3305035-3305054 Msa1269970:CDS 55.0%
CATAGGCCTTTGCATGCTGC+AGG - chr8_3:3305691-3305710 None:intergenic 55.0%
CTGCAGCATGCAAAGGCCTA+TGG + chr8_3:3305689-3305708 Msa1269970:intron 55.0%
AACTCTGCTGCCAAGGAAGG+AGG - chr8_3:3306778-3306797 None:intergenic 55.0%
CCTAACTCTGCTGCCAAGGA+AGG - chr8_3:3306781-3306800 None:intergenic 55.0%
CCTTCCTTGGCAGCAGAGTT+AGG + chr8_3:3306778-3306797 Msa1269970:intron 55.0%
ATCTACTGGTAGGCCCATGG+AGG + chr8_3:3307090-3307109 Msa1269970:intron 55.0%
!! GAGCTGGCTCGGTTTCGATT+TGG - chr8_3:3307369-3307388 None:intergenic 55.0%
AATCTTACGCACAGTGGGGG+TGG + chr8_3:3308112-3308131 Msa1269970:intron 55.0%
ATCTTACGCACAGTGGGGGT+GGG + chr8_3:3308113-3308132 Msa1269970:intron 55.0%
GACTCAGTTGGGACATGGAG+GGG - chr8_3:3308184-3308203 None:intergenic 55.0%
GTGACTCAGTTGGGACATGG+AGG - chr8_3:3308186-3308205 None:intergenic 55.0%
GGCCGTGTTTGTGACTCAGT+TGG - chr8_3:3308196-3308215 None:intergenic 55.0%
TGAGTCACAAACACGGCCCA+AGG + chr8_3:3308198-3308217 Msa1269970:intron 55.0%
GGATTCGAGCTGTCAGGTTC+AGG + chr8_3:3308486-3308505 Msa1269970:intron 55.0%
AGGCTGTGAGCAGACACACA+GGG - chr8_3:3308698-3308717 None:intergenic 55.0%
TGTCTGCTCACAGCCTCTAG+AGG + chr8_3:3308702-3308721 Msa1269970:intron 55.0%
! CAAGTTTGGTGGGGAAGGGA+GGG + chr8_3:3309725-3309744 Msa1269970:intron 55.0%
! AAGTTTGGTGGGGAAGGGAG+GGG + chr8_3:3309726-3309745 Msa1269970:intron 55.0%
!! TAAGAGGGGAAGGCTTTGGG+GGG + chr8_3:3309793-3309812 Msa1269970:intron 55.0%
ACTGCACCAGCAACATCTGC+TGG - chr8_3:3310766-3310785 None:intergenic 55.0%
AGCAGATGTTGCTGGTGCAG+TGG + chr8_3:3310765-3310784 Msa1269970:CDS 55.0%
GGAGTTTGCAAGTCCTACCG+GGG + chr8_3:3311382-3311401 Msa1269970:CDS 55.0%
! TCAGACTCGTATCGGCGGTA+AGG - chr8_3:3311645-3311664 None:intergenic 55.0%
CTTGGTCAGACTCGTATCGG+CGG - chr8_3:3311650-3311669 None:intergenic 55.0%
!! AATGGCACTGGCTCTGCAAC+AGG - chr8_3:3312230-3312249 None:intergenic 55.0%
!! GCTCAGCTTGGCTCTGCAAC+AGG + chr8_3:3305132-3305151 Msa1269970:CDS 60.0%
CGATGACGCTGCTCCTCCAT+GGG - chr8_3:3307106-3307125 None:intergenic 60.0%
GAGGAGCAGCGTCATCGCTA+TGG + chr8_3:3307109-3307128 Msa1269970:CDS 60.0%
TCGAAACCGAGCCAGCTCGT+TGG + chr8_3:3307371-3307390 Msa1269970:intron 60.0%
TGGTTCCTGGTCCAACGAGC+TGG - chr8_3:3307385-3307404 None:intergenic 60.0%
!! GCAGATGGCATGCTGGTTCC+TGG - chr8_3:3307398-3307417 None:intergenic 60.0%
GGAGGGTTTGGAGGGAGAGA+TGG - chr8_3:3307648-3307667 None:intergenic 60.0%
TCTTACGCACAGTGGGGGTG+GGG + chr8_3:3308114-3308133 Msa1269970:intron 60.0%
GAGGCTGTGAGCAGACACAC+AGG - chr8_3:3308699-3308718 None:intergenic 60.0%
! GCAAGTTTGGTGGGGAAGGG+AGG + chr8_3:3309724-3309743 Msa1269970:intron 60.0%
GCGATGACGCTGCTCCTCCA+TGG - chr8_3:3307107-3307126 None:intergenic 65.0%
CCTGGTCCAACGAGCTGGCT+CGG - chr8_3:3307380-3307399 None:intergenic 65.0%
CTTACGCACAGTGGGGGTGG+GGG + chr8_3:3308115-3308134 Msa1269970:intron 65.0%
TTACGCACAGTGGGGGTGGG+GGG + chr8_3:3308116-3308135 Msa1269970:intron 65.0%
TTTGGTGGGGAAGGGAGGGG+AGG + chr8_3:3309729-3309748 Msa1269970:intron 65.0%
TTGGTGGGGAAGGGAGGGGA+GGG + chr8_3:3309730-3309749 Msa1269970:intron 65.0%
!! GGCACTGGCTCTGCAACAGG+AGG - chr8_3:3312227-3312246 None:intergenic 65.0%
CCGAGCCAGCTCGTTGGACC+AGG + chr8_3:3307377-3307396 Msa1269970:intron 70.0%
TACGCACAGTGGGGGTGGGG+GGG + chr8_3:3308117-3308136 Msa1269970:intron 70.0%
TGGTGGGGAAGGGAGGGGAG+GGG + chr8_3:3309731-3309750 Msa1269970:intron 70.0%
GGGAAGGGAGGGGAGGGGTT+TGG + chr8_3:3309736-3309755 Msa1269970:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 3304244 3312662 3304244 ID=Msa1269970;Name=Msa1269970
chr8_3 mRNA 3304244 3312662 3304244 ID=Msa1269970-mRNA-1;Parent=Msa1269970;Name=Msa1269970-mRNA-1;_AED=0.25;_eAED=0.25;_QI=225|0.90|0.91|1|1|1|12|406|476
chr8_3 exon 3304244 3304735 3304244 ID=Msa1269970-mRNA-1:exon:1063;Parent=Msa1269970-mRNA-1
chr8_3 exon 3304826 3305197 3304826 ID=Msa1269970-mRNA-1:exon:1064;Parent=Msa1269970-mRNA-1
chr8_3 exon 3306945 3306985 3306945 ID=Msa1269970-mRNA-1:exon:1065;Parent=Msa1269970-mRNA-1
chr8_3 exon 3307102 3307218 3307102 ID=Msa1269970-mRNA-1:exon:1066;Parent=Msa1269970-mRNA-1
chr8_3 exon 3308849 3308929 3308849 ID=Msa1269970-mRNA-1:exon:1067;Parent=Msa1269970-mRNA-1
chr8_3 exon 3310732 3310794 3310732 ID=Msa1269970-mRNA-1:exon:1068;Parent=Msa1269970-mRNA-1
chr8_3 exon 3310867 3310918 3310867 ID=Msa1269970-mRNA-1:exon:1069;Parent=Msa1269970-mRNA-1
chr8_3 exon 3311192 3311266 3311192 ID=Msa1269970-mRNA-1:exon:1070;Parent=Msa1269970-mRNA-1
chr8_3 exon 3311365 3311556 3311365 ID=Msa1269970-mRNA-1:exon:1071;Parent=Msa1269970-mRNA-1
chr8_3 exon 3311633 3311668 3311633 ID=Msa1269970-mRNA-1:exon:1072;Parent=Msa1269970-mRNA-1
chr8_3 exon 3311761 3311835 3311761 ID=Msa1269970-mRNA-1:exon:1073;Parent=Msa1269970-mRNA-1
chr8_3 exon 3312197 3312662 3312197 ID=Msa1269970-mRNA-1:exon:1074;Parent=Msa1269970-mRNA-1
chr8_3 five_prime_UTR 3304244 3304468 3304244 ID=Msa1269970-mRNA-1:five_prime_utr;Parent=Msa1269970-mRNA-1
chr8_3 CDS 3304469 3304735 3304469 ID=Msa1269970-mRNA-1:cds;Parent=Msa1269970-mRNA-1
chr8_3 CDS 3304826 3305197 3304826 ID=Msa1269970-mRNA-1:cds;Parent=Msa1269970-mRNA-1
chr8_3 CDS 3306945 3306985 3306945 ID=Msa1269970-mRNA-1:cds;Parent=Msa1269970-mRNA-1
chr8_3 CDS 3307102 3307218 3307102 ID=Msa1269970-mRNA-1:cds;Parent=Msa1269970-mRNA-1
chr8_3 CDS 3308849 3308929 3308849 ID=Msa1269970-mRNA-1:cds;Parent=Msa1269970-mRNA-1
chr8_3 CDS 3310732 3310794 3310732 ID=Msa1269970-mRNA-1:cds;Parent=Msa1269970-mRNA-1
chr8_3 CDS 3310867 3310918 3310867 ID=Msa1269970-mRNA-1:cds;Parent=Msa1269970-mRNA-1
chr8_3 CDS 3311192 3311266 3311192 ID=Msa1269970-mRNA-1:cds;Parent=Msa1269970-mRNA-1
chr8_3 CDS 3311365 3311556 3311365 ID=Msa1269970-mRNA-1:cds;Parent=Msa1269970-mRNA-1
chr8_3 CDS 3311633 3311668 3311633 ID=Msa1269970-mRNA-1:cds;Parent=Msa1269970-mRNA-1
chr8_3 CDS 3311761 3311835 3311761 ID=Msa1269970-mRNA-1:cds;Parent=Msa1269970-mRNA-1
chr8_3 CDS 3312197 3312256 3312197 ID=Msa1269970-mRNA-1:cds;Parent=Msa1269970-mRNA-1
chr8_3 three_prime_UTR 3312257 3312662 3312257 ID=Msa1269970-mRNA-1:three_prime_utr;Parent=Msa1269970-mRNA-1
Gene Sequence

>Msa1269970

ATGGCTGCTTCTACAGAGGGTTTGGTGCCCATAACTAGGGCCTTCCTGTCGTCTTACTACGACAAACACCCCTTCACTCCTCCTCTTTCTCCAGACGTCTCTCACCTTACTTCTCTGCTTCGTACTATGACCACTGATTTGGGAATTGATGATGTAGCTCACACTTTCACCCAACCTCCACATAAGATTGATGAAAACATGTGGAAGAATCGAGAATATATTGAAGAAACCATTTTTTTACTTCAACAATCTAATTGGCCAGACACGCTGAAACAACAGCAGTCCACACCTGACAATATTCAATTTTCCGTTATTCTTGGGAAGCTCAAAGATAAACTTCATCGCACTTTGACCACTTTGGAATCTTTCCAAATCAAAAATGCTGATCATGTATTTAACACAGTTATGACATATCTACCACAAGATTTTCGAGGAACTCTCCTCAGACAACAACGCGAACGCTCAGAGAGGAATAAGCAAGCAGAGGTGGATGCTTTGGTAAATTCTGGTGCTAGCATCCGTGATCGATATGCTCTTCTCTGGAAACAACAAATGGAAAGGAGAAGGCAATTAGCTCAGCTTGGCTCTGCAACAGGAGTCTATAAAACCCTCGTCAAGTACCTTGTTGGAGTTCCTGAGGTATTGCTTGATTTTACAAGGCAGATTAATGACGATGACGGGCCCATGGAGGAGCAGCGTCATCGCTATGGACCACCATTATACAGCCTCACCTCAATGATTCTTTCTGTCCGATTCTTCCTTTCATTATCATGGGCACGATATGAGTCTAAGAAATTAAAAGGGGAACAGTTAGCTGTCTTGGAACAAGCTGTTGATGTCTACACTATGGAGTTTGAGAGGTTCATCACATTTCTTAGTGGGGTCTTTGCAAACTCGCCTTTCTTCATTCCAGCAGATGTTGCTGGTGCAGTGGAAATAAGGAAAAATGACGATTACAAAGAGATAAGTGTTCCAGCTGGGAAAACTTTTGAGGTTATACTTTCAGTGGACTCAGTAAACTCGTATATTGCATGGGATTTTTCTTTAGTACAAGGCAAGATAAATATGGATATTGGATTTAGTTTGGAGTTTGCAAGTCCTACCGGGGAAAAGATTGTAAGTTCTCTTGTTAATTTTCCTTATTGTACTCTAATTTGGTTACTTCAGATTTTACCAGAAGCCTTATCAATCTTCATCGCCCATTTTTATCTTCAATCTCTTAGGCTCATACTGAGCCCTTCTTCTCCGTTATCCAGTTCTCTGATGTTGCCTTACCGCCGATACGAGTCTGACCAAGGGAATTTCTGCACATTAATGGCTGGAAGCTATAAACTGATATGGGACAACACACATTCAACTTTTTTTAGAAAGGTGCTACGGTATAAGGTAGATTGTATACCTCCTGTTGCAGAGCCAGTGCCATTCGACTGA
Protein sequence

>Msa1269970

MAASTEGLVPITRAFLSSYYDKHPFTPPLSPDVSHLTSLLRTMTTDLGIDDVAHTFTQPPHKIDENMWKNREYIEETIFLLQQSNWPDTLKQQQSTPDNIQFSVILGKLKDKLHRTLTTLESFQIKNADHVFNTVMTYLPQDFRGTLLRQQRERSERNKQAEVDALVNSGASIRDRYALLWKQQMERRRQLAQLGSATGVYKTLVKYLVGVPEVLLDFTRQINDDDGPMEEQRHRYGPPLYSLTSMILSVRFFLSLSWARYESKKLKGEQLAVLEQAVDVYTMEFERFITFLSGVFANSPFFIPADVAGAVEIRKNDDYKEISVPAGKTFEVILSVDSVNSYIAWDFSLVQGKINMDIGFSLEFASPTGEKIVSSLVNFPYCTLIWLLQILPEALSIFIAHFYLQSLRLILSPSSPLSSSLMLPYRRYESDQGNFCTLMAGSYKLIWDNTHSTFFRKVLRYKVDCIPPVAEPVPFD*