Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227640 | XP_003626627.1 | 87.815 | 476 | 10 | 1 | 1 | 476 | 1 | 428 | 0.0 | 845 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014570 | Msa1227640 | 0.806230 | 9.099321e-50 | -8.615850e-47 |
| Msa0031820 | Msa1227640 | 0.837245 | 5.822817e-57 | -8.615850e-47 |
| Msa0032320 | Msa1227640 | 0.809425 | 1.904105e-50 | -8.615850e-47 |
| Msa0035120 | Msa1227640 | 0.813131 | 2.988689e-51 | -8.615850e-47 |
| Msa0039250 | Msa1227640 | 0.819753 | 9.842386e-53 | -8.615850e-47 |
| Msa0056450 | Msa1227640 | 0.834015 | 3.826498e-56 | -8.615850e-47 |
| Msa0065680 | Msa1227640 | -0.814112 | 1.818776e-51 | -8.615850e-47 |
| Msa0070430 | Msa1227640 | 0.804265 | 2.346756e-49 | -8.615850e-47 |
| Msa0077540 | Msa1227640 | 0.809704 | 1.659234e-50 | -8.615850e-47 |
| Msa0089980 | Msa1227640 | 0.829493 | 4.990299e-55 | -8.615850e-47 |
| Msa0090010 | Msa1227640 | 0.826608 | 2.470997e-54 | -8.615850e-47 |
| Msa0103240 | Msa1227640 | 0.810899 | 9.163624e-51 | -8.615850e-47 |
| Msa0108390 | Msa1227640 | 0.802740 | 4.860409e-49 | -8.615850e-47 |
| Msa0607320 | Msa1227640 | 0.821351 | 4.228447e-53 | -8.615850e-47 |
| Msa0620230 | Msa1227640 | 0.814906 | 1.213279e-51 | -8.615850e-47 |
| Msa0640500 | Msa1227640 | 0.819392 | 1.189727e-52 | -8.615850e-47 |
| Msa0647430 | Msa1227640 | 0.805529 | 1.277795e-49 | -8.615850e-47 |
| Msa0661320 | Msa1227640 | 0.816917 | 4.319704e-52 | -8.615850e-47 |
| Msa0679100 | Msa1227640 | 0.800802 | 1.214529e-48 | -8.615850e-47 |
| Msa0689760 | Msa1227640 | 0.813607 | 2.350031e-51 | -8.615850e-47 |
| Msa0690310 | Msa1227640 | 0.809901 | 1.504448e-50 | -8.615850e-47 |
| Msa0716410 | Msa1227640 | 0.812165 | 4.864123e-51 | -8.615850e-47 |
| Msa0716860 | Msa1227640 | 0.831103 | 2.017807e-55 | -8.615850e-47 |
| Msa0737570 | Msa1227640 | 0.804453 | 2.144732e-49 | -8.615850e-47 |
| Msa0753770 | Msa1227640 | 0.801924 | 7.158046e-49 | -8.615850e-47 |
| Msa0757800 | Msa1227640 | 0.834113 | 3.615736e-56 | -8.615850e-47 |
| Msa0784480 | Msa1227640 | 0.802394 | 5.729152e-49 | -8.615850e-47 |
| Msa0799000 | Msa1227640 | 0.815497 | 8.968740e-52 | -8.615850e-47 |
| Msa0800700 | Msa1227640 | 0.822001 | 2.991735e-53 | -8.615850e-47 |
| Msa0805450 | Msa1227640 | 0.812445 | 4.225491e-51 | -8.615850e-47 |
| Msa0126770 | Msa1227640 | 0.818463 | 1.934596e-52 | -8.615850e-47 |
| Msa0130110 | Msa1227640 | 0.808772 | 2.628456e-50 | -8.615850e-47 |
| Msa0133720 | Msa1227640 | 0.817345 | 3.460746e-52 | -8.615850e-47 |
| Msa0133820 | Msa1227640 | 0.824063 | 9.887570e-54 | -8.615850e-47 |
| Msa0138360 | Msa1227640 | 0.856176 | 3.839014e-62 | -8.615850e-47 |
| Msa0144360 | Msa1227640 | 0.821077 | 4.891913e-53 | -8.615850e-47 |
| Msa0147980 | Msa1227640 | 0.843229 | 1.593092e-58 | -8.615850e-47 |
| Msa0155330 | Msa1227640 | 0.806574 | 7.700493e-50 | -8.615850e-47 |
| Msa0171850 | Msa1227640 | 0.821961 | 3.056745e-53 | -8.615850e-47 |
| Msa0174000 | Msa1227640 | 0.800584 | 1.345846e-48 | -8.615850e-47 |
| Msa0181230 | Msa1227640 | 0.823105 | 1.656891e-53 | -8.615850e-47 |
| Msa0207420 | Msa1227640 | 0.807351 | 5.272772e-50 | -8.615850e-47 |
| Msa1227640 | Msa1258890 | 0.804112 | 2.525216e-49 | -8.615850e-47 |
| Msa1227640 | Msa1259640 | 0.803916 | 2.773595e-49 | -8.615850e-47 |
| Msa1227640 | Msa1269890 | 0.945777 | 1.616793e-104 | -8.615850e-47 |
| Msa1227640 | Msa1269970 | 0.951054 | 4.578513e-109 | -8.615850e-47 |
| Msa1227640 | Msa1282500 | 0.820108 | 8.163941e-53 | -8.615850e-47 |
| Msa1227640 | Msa1286550 | 0.807097 | 5.970948e-50 | -8.615850e-47 |
| Msa1227640 | Msa1289000 | 0.804467 | 2.130516e-49 | -8.615850e-47 |
| Msa1227640 | Msa1297530 | 0.800784 | 1.225023e-48 | -8.615850e-47 |
| Msa1227640 | Msa1307870 | 0.821509 | 3.888994e-53 | -8.615850e-47 |
| Msa1227640 | Msa1329790 | 0.804775 | 1.836958e-49 | -8.615850e-47 |
| Msa1227640 | Msa1371520 | 0.852360 | 4.858111e-61 | -8.615850e-47 |
| Msa1227640 | Msa1373820 | 0.820045 | 8.439471e-53 | -8.615850e-47 |
| Msa1227640 | Msa1393820 | 0.841385 | 4.906155e-58 | -8.615850e-47 |
| Msa1227640 | Msa1418240 | 0.812969 | 3.243604e-51 | -8.615850e-47 |
| Msa1227640 | Msa1420250 | 0.811255 | 7.670467e-51 | -8.615850e-47 |
| Msa1227640 | Msa1425020 | 0.819507 | 1.120248e-52 | -8.615850e-47 |
| Msa1227640 | Msa1452680 | 0.830266 | 3.235709e-55 | -8.615850e-47 |
| Msa1227640 | Msa1464050 | 0.806163 | 9.401738e-50 | -8.615850e-47 |
| Msa0379610 | Msa1227640 | 0.801081 | 1.065182e-48 | -8.615850e-47 |
| Msa0394690 | Msa1227640 | 0.814699 | 1.349016e-51 | -8.615850e-47 |
| Msa0431770 | Msa1227640 | 0.810846 | 9.408069e-51 | -8.615850e-47 |
| Msa0459700 | Msa1227640 | 0.834650 | 2.650555e-56 | -8.615850e-47 |
| Msa0473980 | Msa1227640 | 0.801202 | 1.006224e-48 | -8.615850e-47 |
| Msa0479170 | Msa1227640 | 0.812443 | 4.229008e-51 | -8.615850e-47 |
| Msa0479200 | Msa1227640 | 0.847176 | 1.364447e-59 | -8.615850e-47 |
| Msa0481460 | Msa1227640 | 0.810637 | 1.044116e-50 | -8.615850e-47 |
| Msa1028280 | Msa1227640 | 0.803549 | 3.306644e-49 | -8.615850e-47 |
| Msa1028350 | Msa1227640 | 0.832410 | 9.603124e-56 | -8.615850e-47 |
| Msa1034500 | Msa1227640 | 0.830128 | 3.495722e-55 | -8.615850e-47 |
| Msa1038080 | Msa1227640 | 0.816802 | 4.583263e-52 | -8.615850e-47 |
| Msa1061980 | Msa1227640 | 0.800294 | 1.541904e-48 | -8.615850e-47 |
| Msa1069820 | Msa1227640 | 0.837109 | 6.308431e-57 | -8.615850e-47 |
| Msa1076560 | Msa1227640 | 0.818775 | 1.643358e-52 | -8.615850e-47 |
| Msa1079860 | Msa1227640 | 0.847984 | 8.183563e-60 | -8.615850e-47 |
| Msa1080640 | Msa1227640 | 0.811585 | 6.503720e-51 | -8.615850e-47 |
| Msa0253290 | Msa1227640 | 0.813471 | 2.517621e-51 | -8.615850e-47 |
| Msa0279850 | Msa1227640 | 0.812239 | 4.685887e-51 | -8.615850e-47 |
| Msa0281430 | Msa1227640 | 0.812117 | 4.982448e-51 | -8.615850e-47 |
| Msa0333160 | Msa1227640 | 0.800543 | 1.371954e-48 | -8.615850e-47 |
| Msa0341690 | Msa1227640 | 0.803374 | 3.594782e-49 | -8.615850e-47 |
| Msa0342010 | Msa1227640 | 0.807256 | 5.522905e-50 | -8.615850e-47 |
| Msa0358400 | Msa1227640 | 0.807047 | 6.115608e-50 | -8.615850e-47 |
| Msa1129690 | Msa1227640 | 0.802424 | 5.648619e-49 | -8.615850e-47 |
| Msa1154490 | Msa1227640 | 0.801722 | 7.872489e-49 | -8.615850e-47 |
| Msa1157570 | Msa1227640 | 0.838962 | 2.105313e-57 | -8.615850e-47 |
| Msa1172640 | Msa1227640 | 0.812951 | 3.274408e-51 | -8.615850e-47 |
| Msa1208580 | Msa1227640 | 0.809980 | 1.446956e-50 | -8.615850e-47 |
| Msa1211340 | Msa1227640 | 0.813308 | 2.733330e-51 | -8.615850e-47 |
| Msa0483740 | Msa1227640 | 0.826938 | 2.061399e-54 | -8.615850e-47 |
| Msa0510290 | Msa1227640 | 0.826328 | 2.880779e-54 | -8.615850e-47 |
| Msa0518030 | Msa1227640 | 0.804098 | 2.542929e-49 | -8.615850e-47 |
| Msa0523780 | Msa1227640 | 0.804692 | 1.912387e-49 | -8.615850e-47 |
| Msa0527190 | Msa1227640 | 0.847698 | 9.810983e-60 | -8.615850e-47 |
| Msa0556010 | Msa1227640 | 0.825045 | 5.805770e-54 | -8.615850e-47 |
| Msa0573380 | Msa1227640 | 0.812794 | 3.542916e-51 | -8.615850e-47 |
| Msa0574390 | Msa1227640 | 0.800843 | 1.191406e-48 | -8.615850e-47 |
| Msa0576680 | Msa1227640 | 0.814386 | 1.581730e-51 | -8.615850e-47 |
| Msa0584550 | Msa1227640 | 0.821664 | 3.579492e-53 | -8.615850e-47 |
| Msa0865570 | Msa1227640 | 0.801000 | 1.107026e-48 | -8.615850e-47 |
| Msa0868160 | Msa1227640 | 0.816835 | 4.506380e-52 | -8.615850e-47 |
| Msa0880450 | Msa1227640 | 0.808720 | 2.696114e-50 | -8.615850e-47 |
| Msa0898760 | Msa1227640 | 0.801746 | 7.783969e-49 | -8.615850e-47 |
| Msa0926470 | Msa1227640 | 0.817772 | 2.773102e-52 | -8.615850e-47 |
| Msa0928120 | Msa1227640 | 0.817113 | 3.902286e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227640 | MtrunA17_Chr8g0334391 | 87.815 | 476 | 10 | 1 | 1 | 476 | 1 | 428 | 0.0 | 845 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227640 | AT5G01010.1 | 59.667 | 481 | 135 | 4 | 3 | 474 | 2 | 432 | 0.0 | 576 |
| Msa1227640 | AT5G01010.2 | 58.884 | 484 | 175 | 6 | 3 | 474 | 2 | 473 | 0.0 | 560 |
| Msa1227640 | AT5G01010.5 | 58.884 | 484 | 175 | 6 | 3 | 474 | 2 | 473 | 0.0 | 560 |
| Msa1227640 | AT5G01010.3 | 59.188 | 468 | 132 | 4 | 3 | 461 | 2 | 419 | 0.0 | 552 |
| Msa1227640 | AT5G01010.4 | 57.645 | 484 | 174 | 7 | 3 | 474 | 2 | 466 | 0.0 | 540 |
Find 144 sgRNAs with CRISPR-Local
Find 545 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAGTCAATCTCGATAATT+AGG | 0.138301 | 8_2:+2995669 | None:intergenic |
| TTCCTTATTGTACTCTAATT+TGG | 0.150365 | 8_2:-2988525 | Msa1227640:CDS |
| GGGGAATTTCTGCACATTAA+TGG | 0.230921 | 8_2:-2988197 | Msa1227640:CDS |
| TCGTACTATGACCACTGATT+TGG | 0.264731 | 8_2:-2995354 | Msa1227640:CDS |
| CTGGAAGCTATAAACTGATA+TGG | 0.273766 | 8_2:-2988174 | Msa1227640:CDS |
| AGAGGTTCATCACATTTCTT+AGG | 0.283237 | 8_2:-2991012 | Msa1227640:intron |
| TTAGGATATTGGATTTAGTT+TGG | 0.287616 | 8_2:-2988596 | Msa1227640:intron |
| TTTGTTTATTGTTAGGATAT+TGG | 0.304837 | 8_2:-2988607 | Msa1227640:intron |
| CGTACTATGACCACTGATTT+GGG | 0.334259 | 8_2:-2995353 | Msa1227640:CDS |
| TTAGTCAATCTCGATAATTA+GGG | 0.346894 | 8_2:+2995670 | None:intergenic |
| TGTATAAAATTGTCAATTGT+AGG | 0.349727 | 8_2:-2987520 | Msa1227640:three_prime_UTR |
| AGTACAAGGCAAGATAAATA+TGG | 0.362025 | 8_2:-2988712 | Msa1227640:intron |
| TTCATTCCAGCAGATGTTGC+TGG | 0.364334 | 8_2:-2989200 | Msa1227640:CDS |
| GGCTGCTTCTACAGAGGGTT+TGG | 0.370132 | 8_2:-2995471 | Msa1227640:CDS |
| ATCAATCTTATGTGGAGGTT+GGG | 0.375986 | 8_2:+2995304 | None:intergenic |
| CGACAGGAAGGCCCTAGTTA+TGG | 0.377287 | 8_2:+2995445 | None:intergenic |
| ATGAAGATTGATAAGGCTTC+TGG | 0.378509 | 8_2:+2988487 | None:intergenic |
| CATCAATCTTATGTGGAGGT+TGG | 0.384125 | 8_2:+2995303 | None:intergenic |
| GTTCTTCATCAAGCAATATC+AGG | 0.386716 | 8_2:+2987444 | None:intergenic |
| GATTCTTCCTTTCATTATCA+TGG | 0.387212 | 8_2:-2992746 | Msa1227640:CDS |
| TTGCTGGTGCAGTGGAAATA+AGG | 0.393624 | 8_2:-2989184 | Msa1227640:intron |
| ACTGTAGGTGCTACGGTATA+AGG | 0.397024 | 8_2:-2987767 | Msa1227640:intron |
| GAGAAGAAGAAGAAAAGAAA+GGG | 0.410720 | 8_2:-2995548 | Msa1227640:five_prime_UTR |
| AACCAAATTAGAGTACAATA+AGG | 0.410834 | 8_2:+2988523 | None:intergenic |
| AATGGCACTGGCTCTGCAAC+AGG | 0.413130 | 8_2:+2987730 | None:intergenic |
| CTGGATTACATTACCGTGTC+TGG | 0.414338 | 8_2:+2995215 | None:intergenic |
| AAAATTACTAGTACATCAAT+AGG | 0.416004 | 8_2:+2987660 | None:intergenic |
| AGAGAAGAAGAAGAAAAGAA+AGG | 0.417999 | 8_2:-2995549 | Msa1227640:five_prime_UTR |
| GCAAGCAGAGGTGGATGCTT+TGG | 0.423060 | 8_2:-2994907 | Msa1227640:CDS |
| GATAGGAGGTGTAAAGGAGC+TGG | 0.426347 | 8_2:-2987560 | Msa1227640:three_prime_UTR |
| AGGGGAACAGTTAGCTGTCT+TGG | 0.427621 | 8_2:-2991068 | Msa1227640:CDS |
| GTGGATGCTTTGGTAAATTC+TGG | 0.428219 | 8_2:-2994897 | Msa1227640:CDS |
| AAGAAAAGAAAGGGAGAGGT+GGG | 0.429711 | 8_2:-2995539 | Msa1227640:five_prime_UTR |
| GCTCAGCTTGGCTCTGCAAC+AGG | 0.429973 | 8_2:-2994810 | Msa1227640:CDS |
| GATATTGCTTGATGAAGAAC+AGG | 0.430713 | 8_2:-2987441 | Msa1227640:three_prime_UTR |
| GGAGAAAGAGGAGGAGTGAA+GGG | 0.434405 | 8_2:+2995404 | None:intergenic |
| GACAGGAAGGCCCTAGTTAT+GGG | 0.435903 | 8_2:+2995446 | None:intergenic |
| GGAAGGGATAGGAGGTGTAA+AGG | 0.439158 | 8_2:-2987566 | Msa1227640:three_prime_UTR |
| TCATCGCACTTTGACCACTT+TGG | 0.439826 | 8_2:-2995045 | Msa1227640:CDS |
| TTCGAGAGGGATCGATGAAT+GGG | 0.445075 | 8_2:-2995597 | Msa1227640:five_prime_UTR |
| TCCGATGGCTGCTTCTACAG+AGG | 0.447189 | 8_2:-2995477 | Msa1227640:exon |
| AATTGAACACATCTCGATCT+TGG | 0.449135 | 8_2:+2987601 | None:intergenic |
| AACAAAACATGATACAGAAC+TGG | 0.451046 | 8_2:+2988408 | None:intergenic |
| ACCCTCGTCAAGTACCTTGT+TGG | 0.452026 | 8_2:-2994777 | Msa1227640:CDS |
| TGTTCAATTGATTTCTATGA+AGG | 0.457670 | 8_2:-2987587 | Msa1227640:three_prime_UTR |
| GTAGAAGCAGCCATCGGAAT+CGG | 0.457672 | 8_2:+2995482 | None:intergenic |
| AGCTGTTGATGTCTACACTA+TGG | 0.459802 | 8_2:-2991041 | Msa1227640:CDS |
| ATTCGAGAGGGATCGATGAA+TGG | 0.460080 | 8_2:-2995598 | Msa1227640:five_prime_UTR |
| AGGGTTTGGTGCCCATAACT+AGG | 0.461857 | 8_2:-2995457 | Msa1227640:CDS |
| GCGATGACGCTGCTCCTCCA+TGG | 0.464270 | 8_2:+2992815 | None:intergenic |
| GTATAAAATTGTCAATTGTA+GGG | 0.468884 | 8_2:-2987519 | Msa1227640:three_prime_UTR |
| GAAGAAAAGAAAGGGAGAGG+TGG | 0.473039 | 8_2:-2995540 | Msa1227640:five_prime_UTR |
| ATTCTTCCTTTCATTATCAT+GGG | 0.475061 | 8_2:-2992745 | Msa1227640:CDS |
| TTTGAGCTTCCCAAGAATAA+CGG | 0.475966 | 8_2:+2995076 | None:intergenic |
| CAAAGAAAGATCACGAAGAA+TGG | 0.476155 | 8_2:+2987383 | None:intergenic |
| TTACCCCATTTCATACGAAA+AGG | 0.477327 | 8_2:+2987342 | None:intergenic |
| GAAGTAAGGTGAGAGACGTC+TGG | 0.478606 | 8_2:+2995383 | None:intergenic |
| TTGCATCAGTCGAATGGCAC+TGG | 0.479589 | 8_2:+2987718 | None:intergenic |
| TTGGAGTTTGCAAGTCCTAC+CGG | 0.480664 | 8_2:-2988577 | Msa1227640:CDS |
| GAAGAAGAAAAGAAAGGGAG+AGG | 0.480795 | 8_2:-2995543 | Msa1227640:five_prime_UTR |
| ACTGCACCAGCAACATCTGC+TGG | 0.481617 | 8_2:+2989194 | None:intergenic |
| GTGATCGATATGCTCTTCTC+TGG | 0.488861 | 8_2:-2994863 | Msa1227640:CDS |
| TGATGAAGAACAGGATAGTA+AGG | 0.493122 | 8_2:-2987432 | Msa1227640:three_prime_UTR |
| TGGAGAAAGAGGAGGAGTGA+AGG | 0.493800 | 8_2:+2995403 | None:intergenic |
| CAGTAAACTCGTACATTGCA+TGG | 0.494600 | 8_2:-2988746 | Msa1227640:CDS |
| TGGAAGCTATAAACTGATAT+GGG | 0.497013 | 8_2:-2988173 | Msa1227640:CDS |
| ACGGAAAATTGAATATTGTC+AGG | 0.498862 | 8_2:+2995095 | None:intergenic |
| ATGATAATGAAAGGAAGAAT+CGG | 0.504065 | 8_2:+2992748 | None:intergenic |
| CAATTGATTTCTATGAAGGA+AGG | 0.504987 | 8_2:-2987583 | Msa1227640:three_prime_UTR |
| GGCATGAGTAATTAGAACTT+CGG | 0.505469 | 8_2:+2987622 | None:intergenic |
| TGAGAGACGTCTGGAGAAAG+AGG | 0.507695 | 8_2:+2995392 | None:intergenic |
| GAACTGGATAACGGAGAAGA+AGG | 0.512278 | 8_2:+2988424 | None:intergenic |
| TAGTACGAAGCAGAGAAGTA+AGG | 0.514503 | 8_2:+2995369 | None:intergenic |
| GAGGAATAAGCAAGCAGAGG+TGG | 0.517070 | 8_2:-2994916 | Msa1227640:CDS |
| AATTTCTGCACATTAATGGC+TGG | 0.520564 | 8_2:-2988193 | Msa1227640:CDS |
| TAGGAAGCCAACTGTTGTAA+TGG | 0.521221 | 8_2:-2987480 | Msa1227640:three_prime_UTR |
| ATTGAGGTGAGGCTGTATAA+TGG | 0.524864 | 8_2:+2992783 | None:intergenic |
| CCGATGGCTGCTTCTACAGA+GGG | 0.525140 | 8_2:-2995476 | Msa1227640:CDS |
| GAGGAGCAGCGTCATCGCTA+TGG | 0.528258 | 8_2:-2992810 | Msa1227640:CDS |
| CGATGACGCTGCTCCTCCAT+GGG | 0.529566 | 8_2:+2992816 | None:intergenic |
| AAAGAGATAAGTGTTCCAGC+TGG | 0.530707 | 8_2:-2989074 | Msa1227640:CDS |
| TGGAGTTTGCAAGTCCTACC+GGG | 0.533936 | 8_2:-2988576 | Msa1227640:CDS |
| TCTTCTCTGGAAACAACAAA+TGG | 0.535849 | 8_2:-2994850 | Msa1227640:CDS |
| GGATAGTAAGGACAGTAAGA+AGG | 0.536712 | 8_2:-2987420 | Msa1227640:three_prime_UTR |
| ATGGGCGATGAAGATTGATA+AGG | 0.542844 | 8_2:+2988480 | None:intergenic |
| TCTATGAAGGAAGGGATAGG+AGG | 0.544149 | 8_2:-2987574 | Msa1227640:three_prime_UTR |
| AGAAGGCCTCTGCATTATGC+AGG | 0.549229 | 8_2:-2987686 | Msa1227640:three_prime_UTR |
| CTTATCTACTGGTAGGCCCA+TGG | 0.549474 | 8_2:-2992832 | Msa1227640:intron |
| CATGATACAGAACTGGATAA+CGG | 0.550313 | 8_2:+2988415 | None:intergenic |
| GGCAGATTAATGACGATGAC+GGG | 0.550469 | 8_2:-2992979 | Msa1227640:intron |
| ATATCAGGTTATACTTTCAG+TGG | 0.554756 | 8_2:-2988772 | Msa1227640:intron |
| TCAGACTCGTATCGGCGGTA+AGG | 0.558609 | 8_2:+2988315 | None:intergenic |
| ATTTCTATGAAGGAAGGGAT+AGG | 0.559182 | 8_2:-2987577 | Msa1227640:three_prime_UTR |
| GGGTTTGGTGCCCATAACTA+GGG | 0.559944 | 8_2:-2995456 | Msa1227640:CDS |
| GAGAAAGAGGAGGAGTGAAG+GGG | 0.566570 | 8_2:+2995405 | None:intergenic |
| ACATCTGCTGGAATGAAGAA+AGG | 0.566781 | 8_2:+2989206 | None:intergenic |
| AGAAGGCAATTAGCTCAGCT+TGG | 0.567507 | 8_2:-2994822 | Msa1227640:CDS |
| AGCGTTCGCGTTGTTGTCTG+AGG | 0.569416 | 8_2:+2994943 | None:intergenic |
| TCCTCTGATTCCGATTCCGA+TGG | 0.570194 | 8_2:-2995492 | Msa1227640:exon |
| AATTGATTTCTATGAAGGAA+GGG | 0.572013 | 8_2:-2987582 | Msa1227640:three_prime_UTR |
| TATAATGACTGTAGGTGCTA+CGG | 0.577224 | 8_2:-2987774 | Msa1227640:intron |
| TCTGGAAACAACAAATGGAA+AGG | 0.577715 | 8_2:-2994845 | Msa1227640:CDS |
| CTCCAACAAGGTACTTGACG+AGG | 0.578652 | 8_2:+2994775 | None:intergenic |
| AAGAGATAAGTGTTCCAGCT+GGG | 0.581420 | 8_2:-2989073 | Msa1227640:CDS |
| ATCGTGCCCATGATAATGAA+AGG | 0.583994 | 8_2:+2992739 | None:intergenic |
| GATTGACTAATAACTGAGCA+TGG | 0.584896 | 8_2:-2995657 | Msa1227640:five_prime_UTR |
| AACAACAAATGGAAAGGAGA+AGG | 0.585723 | 8_2:-2994839 | Msa1227640:CDS |
| ATAGGAGGTGTAAAGGAGCT+GGG | 0.592784 | 8_2:-2987559 | Msa1227640:three_prime_UTR |
| AGCAGATGTTGCTGGTGCAG+TGG | 0.597546 | 8_2:-2989192 | Msa1227640:CDS |
| AAATTGAATATTGTCAGGTG+TGG | 0.598417 | 8_2:+2995100 | None:intergenic |
| GTTTGTCGTAGTAAGACGAC+AGG | 0.600262 | 8_2:+2995429 | None:intergenic |
| AGAGAAGAGCATATCGATCA+CGG | 0.605518 | 8_2:+2994865 | None:intergenic |
| TAACTTGGTCAGACTCGTAT+CGG | 0.609024 | 8_2:+2988307 | None:intergenic |
| GAAGGATGAGAATATTCGAG+AGG | 0.611159 | 8_2:-2995611 | Msa1227640:five_prime_UTR |
| TCTACACTATGGAGTTTGAG+AGG | 0.613870 | 8_2:-2991030 | Msa1227640:CDS |
| CCCTCTGTAGAAGCAGCCAT+CGG | 0.614975 | 8_2:+2995476 | None:intergenic |
| GCCATCGGAATCGGAATCAG+AGG | 0.615916 | 8_2:+2995491 | None:intergenic |
| GTACCTTGTTGGAGTTCCTG+AGG | 0.616247 | 8_2:-2994766 | Msa1227640:intron |
| AGTAAACTCGTACATTGCAT+GGG | 0.616763 | 8_2:-2988745 | Msa1227640:CDS |
| AGGCAGATTAATGACGATGA+CGG | 0.621786 | 8_2:-2992980 | Msa1227640:CDS |
| AAGGATGAGAATATTCGAGA+GGG | 0.623794 | 8_2:-2995610 | Msa1227640:five_prime_UTR |
| ACAATCTAATTGGCCAGACA+CGG | 0.626292 | 8_2:-2995228 | Msa1227640:intron |
| AACTGGATAACGGAGAAGAA+GGG | 0.635687 | 8_2:+2988425 | None:intergenic |
| GGCACTGGCTCTGCAACAGG+AGG | 0.638970 | 8_2:+2987733 | None:intergenic |
| ATAAGATTGATGAAAACATG+TGG | 0.639942 | 8_2:-2995292 | Msa1227640:CDS |
| ATCATCAATTCCCAAATCAG+TGG | 0.640263 | 8_2:+2995343 | None:intergenic |
| ATATTAATTTGTCAGAAAAG+GGG | 0.642676 | 8_2:-2991086 | Msa1227640:intron |
| AGAGAGGAATAAGCAAGCAG+AGG | 0.647377 | 8_2:-2994919 | Msa1227640:CDS |
| TCGGACAGAAAGAATCATTG+AGG | 0.651275 | 8_2:+2992767 | None:intergenic |
| CAGAAAGAATCATTGAGGTG+AGG | 0.658338 | 8_2:+2992772 | None:intergenic |
| GAGACGTCTGGAGAAAGAGG+AGG | 0.662195 | 8_2:+2995395 | None:intergenic |
| TAGTCAATCTCGATAATTAG+GGG | 0.662872 | 8_2:+2995671 | None:intergenic |
| GTCGTAGTAAGACGACAGGA+AGG | 0.670921 | 8_2:+2995433 | None:intergenic |
| TCCAACAAGGTACTTGACGA+GGG | 0.671006 | 8_2:+2994776 | None:intergenic |
| AGGTATCCTGCATAATGCAG+AGG | 0.680243 | 8_2:+2987680 | None:intergenic |
| AGAGTTCCTCGAAAATCTTG+TGG | 0.681900 | 8_2:+2994966 | None:intergenic |
| AACAACGCGAACGCTCAGAG+AGG | 0.685075 | 8_2:-2994935 | Msa1227640:CDS |
| CTTGGTCAGACTCGTATCGG+CGG | 0.685715 | 8_2:+2988310 | None:intergenic |
| GGAGTTTGCAAGTCCTACCG+GGG | 0.692066 | 8_2:-2988575 | Msa1227640:CDS |
| GATTTGGAAAGATTCCAAAG+TGG | 0.692886 | 8_2:+2995031 | None:intergenic |
| ATCTACTGGTAGGCCCATGG+AGG | 0.694772 | 8_2:-2992829 | Msa1227640:intron |
| TCGAGAGGGATCGATGAATG+GGG | 0.698183 | 8_2:-2995596 | Msa1227640:five_prime_UTR |
| ATACCTCAGGAACTCCAACA+AGG | 0.706412 | 8_2:+2994763 | None:intergenic |
| GAGGTGAGGCTGTATAATGG+TGG | 0.725726 | 8_2:+2992786 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATAAAGAAGAA+AGG | + | chr8_2:2990093-2990112 | None:intergenic | 10.0% |
| !!! | TACTTTTCTTTTTAAAATTA+AGG | + | chr8_2:2990715-2990734 | None:intergenic | 10.0% |
| !!! | CTTATTTTTCTTTTTTATTA+GGG | - | chr8_2:2990789-2990808 | Msa1227640:intron | 10.0% |
| !!! | ACTTATTTTTCTTTTTTATT+AGG | - | chr8_2:2990981-2991000 | Msa1227640:intron | 10.0% |
| !!! | TTAGTTCTTTTATAAAATTT+GGG | - | chr8_2:2992355-2992374 | Msa1227640:intron | 10.0% |
| !!! | TTATTCAATGAATAAAATTT+TGG | + | chr8_2:2993537-2993556 | None:intergenic | 10.0% |
| !!! | TTTTTTTGTAATGTAATTTT+AGG | - | chr8_2:2994797-2994816 | Msa1227640:CDS | 10.0% |
| !!! | TTTTTTGTAATGTAATTTTA+GGG | - | chr8_2:2994798-2994817 | Msa1227640:CDS | 10.0% |
| !! | ATATATTGATGAATTTAAAT+CGG | - | chr8_2:2994991-2995010 | Msa1227640:CDS | 10.0% |
| !!! | CTGAAAATTCTAATTTTATA+TGG | + | chr8_2:2989109-2989128 | None:intergenic | 15.0% |
| !!! | GATCTTTTTATGTATTTTTA+TGG | + | chr8_2:2989240-2989259 | None:intergenic | 15.0% |
| !! | CAAATAAATATCAAAATCAT+TGG | + | chr8_2:2990599-2990618 | None:intergenic | 15.0% |
| !!! | GCTTATTTTTCTTTTTTATT+AGG | - | chr8_2:2990788-2990807 | Msa1227640:intron | 15.0% |
| !!! | TTTTTCTTTTTTATTAGGAA+TGG | - | chr8_2:2990986-2991005 | Msa1227640:intron | 15.0% |
| !!! | AAGATTTTATTTTTCTTCAT+TGG | + | chr8_2:2991195-2991214 | None:intergenic | 15.0% |
| !! | TTATATTGAAAAAAAACCTT+GGG | + | chr8_2:2991314-2991333 | None:intergenic | 15.0% |
| !!! | GTTATCTTTTATTTTTGTTT+TGG | - | chr8_2:2991696-2991715 | Msa1227640:intron | 15.0% |
| !!! | TTTTTTCTTTTTGTGAATAT+TGG | - | chr8_2:2992164-2992183 | Msa1227640:intron | 15.0% |
| !!! | GTTAGTTCTTTTATAAAATT+TGG | - | chr8_2:2992354-2992373 | Msa1227640:intron | 15.0% |
| !! | TATAACAACATAGATAAAAT+TGG | + | chr8_2:2992969-2992988 | None:intergenic | 15.0% |
| !! | TAGAAGATTTAGAAATTTAT+AGG | - | chr8_2:2993403-2993422 | Msa1227640:intron | 15.0% |
| !!! | TTTTTGTAATGTAATTTTAG+GGG | - | chr8_2:2994799-2994818 | Msa1227640:CDS | 15.0% |
| !! | TATATTGATGAATTTAAATC+GGG | - | chr8_2:2994992-2995011 | Msa1227640:CDS | 15.0% |
| !! | ACAAAGAGAATAAAAAAAGA+AGG | - | chr8_2:2987386-2987405 | Msa1227640:three_prime_UTR | 20.0% |
| !! | AGATTGTTGAAGTAAAAAAA+TGG | + | chr8_2:2987774-2987793 | None:intergenic | 20.0% |
| !!! | TTTTACTTCAACAATCTAAT+TGG | - | chr8_2:2987777-2987796 | Msa1227640:intron | 20.0% |
| !!! | GATACATTTTACATAGAAAT+AGG | + | chr8_2:2988334-2988353 | None:intergenic | 20.0% |
| !! | ACATTAAATCTAATGAAGAA+TGG | + | chr8_2:2988402-2988421 | None:intergenic | 20.0% |
| !!! | TCATAGTAGTTTTAAAATCA+GGG | - | chr8_2:2988708-2988727 | Msa1227640:intron | 20.0% |
| !!! | TTATCCATTATTTAGTTTCA+AGG | + | chr8_2:2988828-2988847 | None:intergenic | 20.0% |
| !!! | TATTTTTTGCATTCATGTTT+AGG | - | chr8_2:2989065-2989084 | Msa1227640:CDS | 20.0% |
| !!! | ATTGTTTTGTTTTGAGTTTT+TGG | + | chr8_2:2989166-2989185 | None:intergenic | 20.0% |
| !! | AAAAACTCAAAACAAAACAA+TGG | - | chr8_2:2989165-2989184 | Msa1227640:intron | 20.0% |
| !! | TAAAAACTTCAAAATTTCGT+GGG | + | chr8_2:2989422-2989441 | None:intergenic | 20.0% |
| !! | TTAAAAACTTCAAAATTTCG+TGG | + | chr8_2:2989423-2989442 | None:intergenic | 20.0% |
| !!! | AATTTTGAAGTTTTTAAACC+AGG | - | chr8_2:2989426-2989445 | Msa1227640:intron | 20.0% |
| !!! | ATTTTGAAGTTTTTAAACCA+GGG | - | chr8_2:2989427-2989446 | Msa1227640:intron | 20.0% |
| !! | TATGGTAATTAGAATGTATT+TGG | - | chr8_2:2989741-2989760 | Msa1227640:intron | 20.0% |
| !! | ATTTATCATAAGTATCACAT+GGG | + | chr8_2:2989896-2989915 | None:intergenic | 20.0% |
| !! | AATTTATCATAAGTATCACA+TGG | + | chr8_2:2989897-2989916 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTTTATTAGGGAA+TGG | - | chr8_2:2990794-2990813 | Msa1227640:intron | 20.0% |
| !!! | TTTCTTTTTTATTAGGGAAT+GGG | - | chr8_2:2990795-2990814 | Msa1227640:intron | 20.0% |
| !!! | CAAAAATACTTTTCCAAAAA+AGG | + | chr8_2:2990849-2990868 | None:intergenic | 20.0% |
| !! | GTTATATTGAAAAAAAACCT+TGG | + | chr8_2:2991315-2991334 | None:intergenic | 20.0% |
| !! | TCAACATATTCACTAATAAT+GGG | + | chr8_2:2991501-2991520 | None:intergenic | 20.0% |
| !!! | TTTATGGTTAGAAGATTTTA+GGG | - | chr8_2:2991616-2991635 | Msa1227640:intron | 20.0% |
| !!! | CATATTAATTTGTCAGAAAA+GGG | - | chr8_2:2991928-2991947 | Msa1227640:intron | 20.0% |
| !!! | ATATTAATTTGTCAGAAAAG+GGG | - | chr8_2:2991929-2991948 | Msa1227640:intron | 20.0% |
| !!! | TTCTTTTATAAAATTTGGGT+TGG | - | chr8_2:2992359-2992378 | Msa1227640:intron | 20.0% |
| !! | AAGAAATAGATGATATTAAG+AGG | - | chr8_2:2992836-2992855 | Msa1227640:intron | 20.0% |
| !! | AGAAATAGATGATATTAAGA+GGG | - | chr8_2:2992837-2992856 | Msa1227640:intron | 20.0% |
| !! | GAATGATAAATTAATGCTTA+TGG | + | chr8_2:2993020-2993039 | None:intergenic | 20.0% |
| !! | TATATAAGTCTCAATGAAAT+TGG | + | chr8_2:2993150-2993169 | None:intergenic | 20.0% |
| !! | TTATATAATGTAAGATCCAA+TGG | - | chr8_2:2993163-2993182 | Msa1227640:intron | 20.0% |
| !! | GACAATATCAAATAATTCAA+CGG | + | chr8_2:2993361-2993380 | None:intergenic | 20.0% |
| !!! | ATAACTTCCTAATTTTGAAT+TGG | - | chr8_2:2993553-2993572 | Msa1227640:intron | 20.0% |
| !! | AAAAAGAAGTTTAGTATAGA+AGG | + | chr8_2:2994391-2994410 | None:intergenic | 20.0% |
| !!! | ACTTCTTTTTGTTTATTGTT+AGG | - | chr8_2:2994401-2994420 | Msa1227640:intron | 20.0% |
| !! | TTTGTTTATTGTTAGGATAT+TGG | - | chr8_2:2994408-2994427 | Msa1227640:intron | 20.0% |
| !! | AAGAGATTGAAGATAAAAAT+GGG | + | chr8_2:2994556-2994575 | None:intergenic | 20.0% |
| !! | TAAGAGATTGAAGATAAAAA+TGG | + | chr8_2:2994557-2994576 | None:intergenic | 20.0% |
| !!! | ATTTTTATCTTCAATCTCTT+AGG | - | chr8_2:2994556-2994575 | Msa1227640:intron | 20.0% |
| !!! | ACATTCAACTTTTTTTAGAA+AGG | - | chr8_2:2994872-2994891 | Msa1227640:CDS | 20.0% |
| !!! | ATACAAATATGCTGATTAAT+TGG | - | chr8_2:2994964-2994983 | Msa1227640:CDS | 20.0% |
| !!! | TACAAATATGCTGATTAATT+GGG | - | chr8_2:2994965-2994984 | Msa1227640:CDS | 20.0% |
| !! | AAAATTACTAGTACATCAAT+AGG | + | chr8_2:2995358-2995377 | None:intergenic | 20.0% |
| !!! | CAATTGACAATTTTATACAA+AGG | + | chr8_2:2995494-2995513 | None:intergenic | 20.0% |
| !! | TGTATAAAATTGTCAATTGT+AGG | - | chr8_2:2995495-2995514 | Msa1227640:exon | 20.0% |
| !! | GTATAAAATTGTCAATTGTA+GGG | - | chr8_2:2995496-2995515 | Msa1227640:five_prime_UTR | 20.0% |
| ! | TTAGTCAATCTCGATAATTA+GGG | + | chr8_2:2987348-2987367 | None:intergenic | 25.0% |
| ! | ATTAGTCAATCTCGATAATT+AGG | + | chr8_2:2987349-2987368 | None:intergenic | 25.0% |
| !! | ATGTTTTCATCAATCTTATG+TGG | + | chr8_2:2987722-2987741 | None:intergenic | 25.0% |
| ! | ATAAGATTGATGAAAACATG+TGG | - | chr8_2:2987723-2987742 | Msa1227640:CDS | 25.0% |
| ! | AAGAGAATGAAAATGGAAAA+TGG | + | chr8_2:2987828-2987847 | None:intergenic | 25.0% |
| ! | TCTGTTAAAGAGAATGAAAA+TGG | + | chr8_2:2987835-2987854 | None:intergenic | 25.0% |
| !! | ATTCAATTTTCCGTTATTCT+TGG | - | chr8_2:2987929-2987948 | Msa1227640:intron | 25.0% |
| !! | TTCAATTTTCCGTTATTCTT+GGG | - | chr8_2:2987930-2987949 | Msa1227640:intron | 25.0% |
| ! | CAAATTCAATATTGTTCAAG+AGG | + | chr8_2:2988437-2988456 | None:intergenic | 25.0% |
| !! | TAATGGAGTTTTCATCTATT+AGG | + | chr8_2:2988526-2988545 | None:intergenic | 25.0% |
| ! | TACAACTAGTTACATACTAA+TGG | + | chr8_2:2988543-2988562 | None:intergenic | 25.0% |
| ! | ATTAGTATGTAACTAGTTGT+AGG | - | chr8_2:2988542-2988561 | Msa1227640:CDS | 25.0% |
| ! | TTAGTATGTAACTAGTTGTA+GGG | - | chr8_2:2988543-2988562 | Msa1227640:CDS | 25.0% |
| !!! | GTCATAGTAGTTTTAAAATC+AGG | - | chr8_2:2988707-2988726 | Msa1227640:intron | 25.0% |
| ! | AACAAAACTAAATTAGTTGC+AGG | - | chr8_2:2988849-2988868 | Msa1227640:intron | 25.0% |
| ! | GAATGCAATATTTGAATAAC+AGG | - | chr8_2:2988881-2988900 | Msa1227640:intron | 25.0% |
| ! | GAAAAAATGAGGTCAAAAAT+AGG | + | chr8_2:2989009-2989028 | None:intergenic | 25.0% |
| !! | TAGAATTTTCAGACAAAAGA+CGG | - | chr8_2:2989117-2989136 | Msa1227640:intron | 25.0% |
| !! | CAGCTCAAAATTTGATTTAT+AGG | + | chr8_2:2989200-2989219 | None:intergenic | 25.0% |
| !!! | ATTGCAAATTTTGAAACTTG+TGG | + | chr8_2:2989315-2989334 | None:intergenic | 25.0% |
| ! | TAACCATGCAAACAAAATTA+TGG | + | chr8_2:2989379-2989398 | None:intergenic | 25.0% |
| !!! | ATTCATAATTAATTTGTCCC+TGG | + | chr8_2:2989447-2989466 | None:intergenic | 25.0% |
| ! | TAGTTATTGCAAGAATTTAC+AGG | + | chr8_2:2989504-2989523 | None:intergenic | 25.0% |
| ! | ATTATGTAGATAATGCATCT+AGG | - | chr8_2:2989693-2989712 | Msa1227640:intron | 25.0% |
| !! | ATGATAATGAAAGGAAGAAT+CGG | + | chr8_2:2990270-2990289 | None:intergenic | 25.0% |
| ! | ATTCTTCCTTTCATTATCAT+GGG | - | chr8_2:2990270-2990289 | Msa1227640:intron | 25.0% |
| !!! | CATCTTTGGTATTTTAATGT+TGG | - | chr8_2:2990328-2990347 | Msa1227640:intron | 25.0% |
| !! | TACTTTTCCAAAAAAAGTGA+AGG | + | chr8_2:2991026-2991045 | None:intergenic | 25.0% |
| !! | ATCTTCTCCTTGTATATTTT+TGG | - | chr8_2:2991142-2991161 | Msa1227640:intron | 25.0% |
| ! | GATCAATTATAATAGACGTA+CGG | - | chr8_2:2991391-2991410 | Msa1227640:intron | 25.0% |
| ! | CTCAACATATTCACTAATAA+TGG | + | chr8_2:2991502-2991521 | None:intergenic | 25.0% |
| ! | TTCAGGATAAGTTATGTTTA+TGG | - | chr8_2:2991600-2991619 | Msa1227640:intron | 25.0% |
| !! | GTTTATGGTTAGAAGATTTT+AGG | - | chr8_2:2991615-2991634 | Msa1227640:intron | 25.0% |
| !! | TTATGGTTAGAAGATTTTAG+GGG | - | chr8_2:2991617-2991636 | Msa1227640:intron | 25.0% |
| !!! | GCATATTAATTTGTCAGAAA+AGG | - | chr8_2:2991927-2991946 | Msa1227640:intron | 25.0% |
| !!! | AATAATAATGCTTGAGTTGA+TGG | - | chr8_2:2992032-2992051 | Msa1227640:intron | 25.0% |
| !! | TGGTTTTCATGCAAAATTTA+TGG | - | chr8_2:2992184-2992203 | Msa1227640:intron | 25.0% |
| !! | CAAAACAATTGATTTCTATC+TGG | - | chr8_2:2992332-2992351 | Msa1227640:intron | 25.0% |
| ! | GAAATAGATGATATTAAGAG+GGG | - | chr8_2:2992838-2992857 | Msa1227640:intron | 25.0% |
| ! | GAACTAAAAAATTGTATTGG+AGG | - | chr8_2:2992914-2992933 | Msa1227640:intron | 25.0% |
| ! | TAAAAAATTGTATTGGAGGA+GGG | - | chr8_2:2992918-2992937 | Msa1227640:intron | 25.0% |
| ! | TATCATATTATAGAAAGTCG+TGG | - | chr8_2:2993465-2993484 | Msa1227640:intron | 25.0% |
| ! | AAAAGGATGAATTTGAATAG+TGG | + | chr8_2:2993902-2993921 | None:intergenic | 25.0% |
| !! | TATTCAAATTCATCCTTTTC+AGG | - | chr8_2:2993903-2993922 | Msa1227640:intron | 25.0% |
| ! | TCTAGATTATGCATACAATA+AGG | + | chr8_2:2994096-2994115 | None:intergenic | 25.0% |
| !!! | TGCTGCGATTTTTTTTTTTT+TGG | - | chr8_2:2994332-2994351 | Msa1227640:intron | 25.0% |
| ! | TTAGTATAGAAGGATATCTT+AGG | + | chr8_2:2994381-2994400 | None:intergenic | 25.0% |
| ! | TTAGGATATTGGATTTAGTT+TGG | - | chr8_2:2994419-2994438 | Msa1227640:intron | 25.0% |
| ! | TTCCTTATTGTACTCTAATT+TGG | - | chr8_2:2994490-2994509 | Msa1227640:intron | 25.0% |
| ! | AACCAAATTAGAGTACAATA+AGG | + | chr8_2:2994495-2994514 | None:intergenic | 25.0% |
| ! | AAAAATGGCAAAACAAACAT+GGG | + | chr8_2:2994640-2994659 | None:intergenic | 25.0% |
| ! | AAAAAATGGCAAAACAAACA+TGG | + | chr8_2:2994641-2994660 | None:intergenic | 25.0% |
| !!! | TTTGCCATTTTTTATTCTCA+TGG | - | chr8_2:2994648-2994667 | Msa1227640:intron | 25.0% |
| ! | ATAGAAGAAACACATATAAC+AGG | + | chr8_2:2995055-2995074 | None:intergenic | 25.0% |
| !! | TTTCTTCTATTGTTACGTTT+TGG | - | chr8_2:2995065-2995084 | Msa1227640:CDS | 25.0% |
| ! | TGTTATTGTATAATGACTGT+AGG | - | chr8_2:2995233-2995252 | Msa1227640:CDS | 25.0% |
| !! | TGTTCAATTGATTTCTATGA+AGG | - | chr8_2:2995428-2995447 | Msa1227640:CDS | 25.0% |
| !! | AATTGATTTCTATGAAGGAA+GGG | - | chr8_2:2995433-2995452 | Msa1227640:CDS | 25.0% |
| !!! | AATTGTAGGGTTTTATATTG+TGG | - | chr8_2:2995509-2995528 | Msa1227640:five_prime_UTR | 25.0% |
| !!! | TTTTTTACCATTACAACAGT+TGG | + | chr8_2:2995545-2995564 | None:intergenic | 25.0% |
| TAGTCAATCTCGATAATTAG+GGG | + | chr8_2:2987347-2987366 | None:intergenic | 30.0% | |
| AGAGAAGAAGAAGAAAAGAA+AGG | - | chr8_2:2987466-2987485 | Msa1227640:three_prime_UTR | 30.0% | |
| GAGAAGAAGAAGAAAAGAAA+GGG | - | chr8_2:2987467-2987486 | Msa1227640:three_prime_UTR | 30.0% | |
| ! | TTTTCATCAATCTTATGTGG+AGG | + | chr8_2:2987719-2987738 | None:intergenic | 30.0% |
| ATGAAAATGGAAAATGGATC+TGG | + | chr8_2:2987822-2987841 | None:intergenic | 30.0% | |
| AAATTGAATATTGTCAGGTG+TGG | + | chr8_2:2987918-2987937 | None:intergenic | 30.0% | |
| ACGGAAAATTGAATATTGTC+AGG | + | chr8_2:2987923-2987942 | None:intergenic | 30.0% | |
| !! | CATGATCAGCATTTTTGATT+TGG | + | chr8_2:2988003-2988022 | None:intergenic | 30.0% |
| !! | ATCTAATGAAGAATGGATTG+TGG | + | chr8_2:2988395-2988414 | None:intergenic | 30.0% |
| AACGATTTCTTCTATTTGTG+TGG | - | chr8_2:2988499-2988518 | Msa1227640:CDS | 30.0% | |
| AACTTTACCATCTCAAAATC+CGG | - | chr8_2:2988592-2988611 | Msa1227640:CDS | 30.0% | |
| GGATATCATTAATGAGAAGT+GGG | + | chr8_2:2988798-2988817 | None:intergenic | 30.0% | |
| ! | ATTTAGTTTCAAGGTGCTAT+GGG | + | chr8_2:2988819-2988838 | None:intergenic | 30.0% |
| ! | TATTTAGTTTCAAGGTGCTA+TGG | + | chr8_2:2988820-2988839 | None:intergenic | 30.0% |
| AGCACCTTGAAACTAAATAA+TGG | - | chr8_2:2988821-2988840 | Msa1227640:intron | 30.0% | |
| TTCAGATATTGCATTCTTCA+GGG | + | chr8_2:2988978-2988997 | None:intergenic | 30.0% | |
| TATGTCTACAGGAAAAAATG+AGG | + | chr8_2:2989020-2989039 | None:intergenic | 30.0% | |
| TTTCTAGACTTTATGTCTAC+AGG | + | chr8_2:2989031-2989050 | None:intergenic | 30.0% | |
| AAATTTGACCAGTGAGTATA+TGG | + | chr8_2:2989352-2989371 | None:intergenic | 30.0% | |
| !! | GTTCCATAATTTTGTTTGCA+TGG | - | chr8_2:2989373-2989392 | Msa1227640:intron | 30.0% |
| ! | AAACATGGAGTTTTTGTTGA+TGG | + | chr8_2:2989565-2989584 | None:intergenic | 30.0% |
| ATTATGCAGATAATGCAACT+AGG | + | chr8_2:2989631-2989650 | None:intergenic | 30.0% | |
| ATTATCTGCATAATGCAACT+AGG | - | chr8_2:2989637-2989656 | Msa1227640:intron | 30.0% | |
| CAACTAGGATATCTATACTA+TGG | - | chr8_2:2989652-2989671 | Msa1227640:intron | 30.0% | |
| GCATTATCTACATAATGCAA+GGG | + | chr8_2:2989689-2989708 | None:intergenic | 30.0% | |
| TGCATTATCTACATAATGCA+AGG | + | chr8_2:2989690-2989709 | None:intergenic | 30.0% | |
| TACTATTCACACTGCAATTA+TGG | - | chr8_2:2989723-2989742 | Msa1227640:intron | 30.0% | |
| ! | GACTGTTCTATTTGAGTTAT+AGG | - | chr8_2:2989995-2990014 | Msa1227640:intron | 30.0% |
| !! | AGGTATTGCTTGATTTTACA+AGG | - | chr8_2:2990015-2990034 | Msa1227640:intron | 30.0% |
| GATTCTTCCTTTCATTATCA+TGG | - | chr8_2:2990269-2990288 | Msa1227640:intron | 30.0% | |
| ATTAAAATACCAAAGATGCG+AGG | + | chr8_2:2990326-2990345 | None:intergenic | 30.0% | |
| CAATTCAAAGATCACAGTTA+AGG | + | chr8_2:2990376-2990395 | None:intergenic | 30.0% | |
| ! | TATTCAACTGAACGGTTTTA+GGG | + | chr8_2:2990528-2990547 | None:intergenic | 30.0% |
| ! | TTATTCAACTGAACGGTTTT+AGG | + | chr8_2:2990529-2990548 | None:intergenic | 30.0% |
| AATAACTGGGTAAAAAGTTG+TGG | - | chr8_2:2990544-2990563 | Msa1227640:intron | 30.0% | |
| TATGGTTATGTTTAGATGGA+GGG | + | chr8_2:2990762-2990781 | None:intergenic | 30.0% | |
| TCCATCTAAACATAACCATA+GGG | - | chr8_2:2990762-2990781 | Msa1227640:intron | 30.0% | |
| ! | TACTTTTCCAAAAAAGGTGA+AGG | + | chr8_2:2990843-2990862 | None:intergenic | 30.0% |
| AAATAAGTACTCCCTATACA+GGG | + | chr8_2:2990969-2990988 | None:intergenic | 30.0% | |
| AAAATAAGTACTCCCTATAC+AGG | + | chr8_2:2990970-2990989 | None:intergenic | 30.0% | |
| TATTAGGAATGGAAAGATAG+AGG | - | chr8_2:2990997-2991016 | Msa1227640:intron | 30.0% | |
| TGGAACTCCAAAAATATACA+AGG | + | chr8_2:2991152-2991171 | None:intergenic | 30.0% | |
| AAATAAAATCTTACGCACAG+TGG | - | chr8_2:2991203-2991222 | Msa1227640:intron | 30.0% | |
| AATAAAATCTTACGCACAGT+GGG | - | chr8_2:2991204-2991223 | Msa1227640:intron | 30.0% | |
| TTTCAATATAACGAGTAGCT+TGG | - | chr8_2:2991323-2991342 | Msa1227640:intron | 30.0% | |
| AACATCCACTACTAATTGAT+TGG | - | chr8_2:2991562-2991581 | Msa1227640:intron | 30.0% | |
| TAGTATCATAGAACTGATAG+AGG | - | chr8_2:2991645-2991664 | Msa1227640:intron | 30.0% | |
| AGTATCATAGAACTGATAGA+GGG | - | chr8_2:2991646-2991665 | Msa1227640:intron | 30.0% | |
| ! | GTTTGAATGTTACTTCATGA+TGG | - | chr8_2:2991747-2991766 | Msa1227640:intron | 30.0% |
| TCAATTATGAATTCCTCTAG+AGG | + | chr8_2:2991813-2991832 | None:intergenic | 30.0% | |
| TCTAGAGGAATTCATAATTG+AGG | - | chr8_2:2991812-2991831 | Msa1227640:intron | 30.0% | |
| CTAGAGGAATTCATAATTGA+GGG | - | chr8_2:2991813-2991832 | Msa1227640:intron | 30.0% | |
| TAATCTTGACCATCAATGTA+TGG | + | chr8_2:2992276-2992295 | None:intergenic | 30.0% | |
| !! | CAATTGTTTTGTGAGAGATA+AGG | + | chr8_2:2992323-2992342 | None:intergenic | 30.0% |
| CAGTTACTACAACTCAAATT+AGG | - | chr8_2:2992557-2992576 | Msa1227640:intron | 30.0% | |
| ACGTGTTTATTAAGTCTCTT+AGG | - | chr8_2:2992749-2992768 | Msa1227640:CDS | 30.0% | |
| !!! | TTAGGTTTTGTTTGCAAGTT+TGG | - | chr8_2:2992767-2992786 | Msa1227640:CDS | 30.0% |
| AATACAAAACCCTCATCATT+TGG | - | chr8_2:2992890-2992909 | Msa1227640:intron | 30.0% | |
| ATACAAAACCCTCATCATTT+GGG | - | chr8_2:2992891-2992910 | Msa1227640:intron | 30.0% | |
| GGGGAACTAAAAAATTGTAT+TGG | - | chr8_2:2992911-2992930 | Msa1227640:intron | 30.0% | |
| CTAAAAAATTGTATTGGAGG+AGG | - | chr8_2:2992917-2992936 | Msa1227640:intron | 30.0% | |
| CAAATAATTCAACGGTAGAT+TGG | + | chr8_2:2993353-2993372 | None:intergenic | 30.0% | |
| CATTGCACCAATTCAAAATT+AGG | + | chr8_2:2993563-2993582 | None:intergenic | 30.0% | |
| !!! | AAGTATGCTTATTTTGAACC+TGG | - | chr8_2:2993678-2993697 | Msa1227640:intron | 30.0% |
| !! | TTGCTAGTAATTTTGATCAG+TGG | - | chr8_2:2993770-2993789 | Msa1227640:intron | 30.0% |
| !! | TGCTAGTAATTTTGATCAGT+GGG | - | chr8_2:2993771-2993790 | Msa1227640:intron | 30.0% |
| !!! | AATCGTCATTTTTCCTGAAA+AGG | + | chr8_2:2993919-2993938 | None:intergenic | 30.0% |
| !!! | ACTTTTGAGGTATATTGACA+AGG | - | chr8_2:2993968-2993987 | Msa1227640:intron | 30.0% |
| ! | TTGTATGCATAATCTAGAGT+TGG | - | chr8_2:2994098-2994117 | Msa1227640:intron | 30.0% |
| TATGATGATCTTCGAATATC+AGG | - | chr8_2:2994228-2994247 | Msa1227640:intron | 30.0% | |
| ATATCAGGTTATACTTTCAG+TGG | - | chr8_2:2994243-2994262 | Msa1227640:intron | 30.0% | |
| ! | TGGGATTTTTCTTTAGTACA+AGG | - | chr8_2:2994289-2994308 | Msa1227640:intron | 30.0% |
| AGTACAAGGCAAGATAAATA+TGG | - | chr8_2:2994303-2994322 | Msa1227640:intron | 30.0% | |
| AACAAAACATGATACAGAAC+TGG | + | chr8_2:2994610-2994629 | None:intergenic | 30.0% | |
| ACCACCATGAGAATAAAAAA+TGG | + | chr8_2:2994655-2994674 | None:intergenic | 30.0% | |
| TGGAAGCTATAAACTGATAT+GGG | - | chr8_2:2994842-2994861 | Msa1227640:CDS | 30.0% | |
| ! | CAATTGATTTCTATGAAGGA+AGG | - | chr8_2:2995432-2995451 | Msa1227640:CDS | 30.0% |
| ! | AAAAGCCTTTTCGTATGAAA+TGG | - | chr8_2:2995668-2995687 | Msa1227640:five_prime_UTR | 30.0% |
| ! | AAAGCCTTTTCGTATGAAAT+GGG | - | chr8_2:2995669-2995688 | Msa1227640:five_prime_UTR | 30.0% |
| GATTGACTAATAACTGAGCA+TGG | - | chr8_2:2987358-2987377 | Msa1227640:three_prime_UTR | 35.0% | |
| AAGGATGAGAATATTCGAGA+GGG | - | chr8_2:2987405-2987424 | Msa1227640:three_prime_UTR | 35.0% | |
| ATCATCAATTCCCAAATCAG+TGG | + | chr8_2:2987675-2987694 | None:intergenic | 35.0% | |
| ATCAATCTTATGTGGAGGTT+GGG | + | chr8_2:2987714-2987733 | None:intergenic | 35.0% | |
| TTTGAGCTTCCCAAGAATAA+CGG | + | chr8_2:2987942-2987961 | None:intergenic | 35.0% | |
| GATTTGGAAAGATTCCAAAG+TGG | + | chr8_2:2987987-2988006 | None:intergenic | 35.0% | |
| ! | TATCTACCACAAGATTTTCG+AGG | - | chr8_2:2988043-2988062 | Msa1227640:intron | 35.0% |
| ! | TCTTCTCTGGAAACAACAAA+TGG | - | chr8_2:2988165-2988184 | Msa1227640:CDS | 35.0% |
| TCTGGAAACAACAAATGGAA+AGG | - | chr8_2:2988170-2988189 | Msa1227640:CDS | 35.0% | |
| AACAACAAATGGAAAGGAGA+AGG | - | chr8_2:2988176-2988195 | Msa1227640:CDS | 35.0% | |
| TTCCTGAGGTATGTATCTAT+GGG | - | chr8_2:2988263-2988282 | Msa1227640:intron | 35.0% | |
| AACTACTATGACGTCAAATG+TGG | + | chr8_2:2988699-2988718 | None:intergenic | 35.0% | |
| GGGATATCATTAATGAGAAG+TGG | + | chr8_2:2988799-2988818 | None:intergenic | 35.0% | |
| CTTCAGATATTGCATTCTTC+AGG | + | chr8_2:2988979-2988998 | None:intergenic | 35.0% | |
| TTTGAGCTGATTGTTTGTAG+AGG | - | chr8_2:2989211-2989230 | Msa1227640:CDS | 35.0% | |
| CGAAATGCTATGAAACTTTG+CGG | + | chr8_2:2989262-2989281 | None:intergenic | 35.0% | |
| CCAGTGAGTATATGGTTATT+TGG | + | chr8_2:2989344-2989363 | None:intergenic | 35.0% | |
| CCAAATAACCATATACTCAC+TGG | - | chr8_2:2989341-2989360 | Msa1227640:intron | 35.0% | |
| AATGATATCGCATGGAAACA+TGG | + | chr8_2:2989580-2989599 | None:intergenic | 35.0% | |
| AGCTATACTATGTAGGAACA+TGG | + | chr8_2:2989606-2989625 | None:intergenic | 35.0% | |
| TACATAATGCAAGGGTTTGA+GGG | + | chr8_2:2989681-2989700 | None:intergenic | 35.0% | |
| ! | ACTGTTTTGTCTTCTAGTAC+TGG | - | chr8_2:2989938-2989957 | Msa1227640:intron | 35.0% |
| TGTGTGTGAATAACAATCAC+AGG | - | chr8_2:2990154-2990173 | Msa1227640:intron | 35.0% | |
| ACAGGATAACTCTTATCTAC+TGG | - | chr8_2:2990172-2990191 | Msa1227640:intron | 35.0% | |
| GATAACTCTTATCTACTGGT+AGG | - | chr8_2:2990176-2990195 | Msa1227640:intron | 35.0% | |
| !! | ATTCAACTGAACGGTTTTAG+GGG | + | chr8_2:2990527-2990546 | None:intergenic | 35.0% |
| AAACCGTTCAGTTGAATAAC+TGG | - | chr8_2:2990530-2990549 | Msa1227640:intron | 35.0% | |
| AACCGTTCAGTTGAATAACT+GGG | - | chr8_2:2990531-2990550 | Msa1227640:intron | 35.0% | |
| TACCCAGTTATTCAACTGAA+CGG | + | chr8_2:2990536-2990555 | None:intergenic | 35.0% | |
| TTATGTTTAGATGGAGGGTT+TGG | + | chr8_2:2990757-2990776 | None:intergenic | 35.0% | |
| CTATGGTTATGTTTAGATGG+AGG | + | chr8_2:2990763-2990782 | None:intergenic | 35.0% | |
| CTCCATCTAAACATAACCAT+AGG | - | chr8_2:2990761-2990780 | Msa1227640:intron | 35.0% | |
| TCCCTATGGTTATGTTTAGA+TGG | + | chr8_2:2990766-2990785 | None:intergenic | 35.0% | |
| ATCTAAACATAACCATAGGG+AGG | - | chr8_2:2990765-2990784 | Msa1227640:intron | 35.0% | |
| TCTAAACATAACCATAGGGA+GGG | - | chr8_2:2990766-2990785 | Msa1227640:intron | 35.0% | |
| TTATTAGGGAATGGGATGAA+TGG | - | chr8_2:2990803-2990822 | Msa1227640:intron | 35.0% | |
| TCAAAATCTTCTCCCTGTAT+AGG | - | chr8_2:2990954-2990973 | Msa1227640:intron | 35.0% | |
| CAAAATCTTCTCCCTGTATA+GGG | - | chr8_2:2990955-2990974 | Msa1227640:intron | 35.0% | |
| !!! | GAGGTATCCTTCACTTTTTT+TGG | - | chr8_2:2991016-2991035 | Msa1227640:CDS | 35.0% |
| ATAAAATCTTACGCACAGTG+GGG | - | chr8_2:2991205-2991224 | Msa1227640:intron | 35.0% | |
| AAACCAAATAGTTACCCCAA+TGG | + | chr8_2:2991449-2991468 | None:intergenic | 35.0% | |
| ATTGGGGTAACTATTTGGTT+TGG | - | chr8_2:2991448-2991467 | Msa1227640:intron | 35.0% | |
| ! | TTGGGGTAACTATTTGGTTT+GGG | - | chr8_2:2991449-2991468 | Msa1227640:intron | 35.0% |
| GGATGTTACATTCAACTAGT+TGG | + | chr8_2:2991549-2991568 | None:intergenic | 35.0% | |
| CGAATCCAATCAATTAGTAG+TGG | + | chr8_2:2991570-2991589 | None:intergenic | 35.0% | |
| CATGAAGTAACATTCAAACG+CGG | + | chr8_2:2991746-2991765 | None:intergenic | 35.0% | |
| GTTTGATTCTATAGCAGTTG+TGG | - | chr8_2:2991845-2991864 | Msa1227640:intron | 35.0% | |
| AGAGGTTCATCACATTTCTT+AGG | - | chr8_2:2992003-2992022 | Msa1227640:intron | 35.0% | |
| AAGTAATATCAAGCGCAGTT+TGG | - | chr8_2:2992382-2992401 | Msa1227640:intron | 35.0% | |
| !! | CATCTCCTAATTTGAGTTGT+TGG | - | chr8_2:2992422-2992441 | Msa1227640:intron | 35.0% |
| TTGGCGGTAATTTGATCAAA+TGG | - | chr8_2:2992441-2992460 | Msa1227640:intron | 35.0% | |
| TGACAATTTGTGAACTGACA+TGG | - | chr8_2:2992528-2992547 | Msa1227640:intron | 35.0% | |
| ACTCAAATTAGGAGATGTCA+AGG | - | chr8_2:2992568-2992587 | Msa1227640:intron | 35.0% | |
| GTTGAAAGCAATATGTAGCT+TGG | + | chr8_2:2992616-2992635 | None:intergenic | 35.0% | |
| AGAACTTATCTCTCACAAAG+TGG | + | chr8_2:2992679-2992698 | None:intergenic | 35.0% | |
| TGTGAGAGATAAGTTCTTTC+AGG | - | chr8_2:2992682-2992701 | Msa1227640:intron | 35.0% | |
| GGAGAAAACATTACCGATAT+TGG | - | chr8_2:2992703-2992722 | Msa1227640:intron | 35.0% | |
| GAAAACATTACCGATATTGG+TGG | - | chr8_2:2992706-2992725 | Msa1227640:intron | 35.0% | |
| !!! | GTTTTGTTTGCAAGTTTGGT+GGG | - | chr8_2:2992771-2992790 | Msa1227640:CDS | 35.0% |
| !! | TTTTGTTTGCAAGTTTGGTG+GGG | - | chr8_2:2992772-2992791 | Msa1227640:CDS | 35.0% |
| TAGATGATATTAAGAGGGGA+AGG | - | chr8_2:2992842-2992861 | Msa1227640:intron | 35.0% | |
| TACAAAACCCTCATCATTTG+GGG | - | chr8_2:2992892-2992911 | Msa1227640:intron | 35.0% | |
| ! | TTTAGTTCCCCAAATGATGA+GGG | + | chr8_2:2992902-2992921 | None:intergenic | 35.0% |
| !!! | TTTTAGTTCCCCAAATGATG+AGG | + | chr8_2:2992903-2992922 | None:intergenic | 35.0% |
| GGGGAAAATATAGGGAAAAT+TGG | + | chr8_2:2993084-2993103 | None:intergenic | 35.0% | |
| CAGCTTATGGGGAAAATATA+GGG | + | chr8_2:2993092-2993111 | None:intergenic | 35.0% | |
| TAATGTAAGATCCAATGGTC+AGG | - | chr8_2:2993168-2993187 | Msa1227640:intron | 35.0% | |
| AAAGAGTAAATCCTGACCAT+TGG | + | chr8_2:2993182-2993201 | None:intergenic | 35.0% | |
| ! | AGTTGATATGCACTTTGTGT+GGG | + | chr8_2:2993237-2993256 | None:intergenic | 35.0% |
| TAATCCTCTTCTCTCATTTC+AGG | + | chr8_2:2993263-2993282 | None:intergenic | 35.0% | |
| AGAGAAGAGGATTAACTGTA+TGG | - | chr8_2:2993269-2993288 | Msa1227640:intron | 35.0% | |
| ATGGTCAGATTAACTCTTCA+TGG | - | chr8_2:2993288-2993307 | Msa1227640:intron | 35.0% | |
| !! | TATTTTGAACCTGGTGTGAA+CGG | - | chr8_2:2993687-2993706 | Msa1227640:intron | 35.0% |
| !! | GCTAGTAATTTTGATCAGTG+GGG | - | chr8_2:2993772-2993791 | Msa1227640:intron | 35.0% |
| ATCTGACTCAGATGTATTTG+TGG | - | chr8_2:2994156-2994175 | Msa1227640:intron | 35.0% | |
| AGTAAACTCGTACATTGCAT+GGG | - | chr8_2:2994270-2994289 | Msa1227640:intron | 35.0% | |
| !!! | TTTTTTTGGTGTGTGCGAAT+TGG | - | chr8_2:2994346-2994365 | Msa1227640:intron | 35.0% |
| ! | AGAACTTACAATCTTTTCCC+CGG | + | chr8_2:2994460-2994479 | None:intergenic | 35.0% |
| ATGAAGATTGATAAGGCTTC+TGG | + | chr8_2:2994531-2994550 | None:intergenic | 35.0% | |
| CATGATACAGAACTGGATAA+CGG | + | chr8_2:2994603-2994622 | None:intergenic | 35.0% | |
| !!! | GCCATTTTTTATTCTCATGG+TGG | - | chr8_2:2994651-2994670 | Msa1227640:intron | 35.0% |
| TTATTCTCATGGTGGTTGAT+TGG | - | chr8_2:2994659-2994678 | Msa1227640:intron | 35.0% | |
| ACAAACATGACAGACTAACT+TGG | + | chr8_2:2994726-2994745 | None:intergenic | 35.0% | |
| AATTTCTGCACATTAATGGC+TGG | - | chr8_2:2994822-2994841 | Msa1227640:CDS | 35.0% | |
| CTGGAAGCTATAAACTGATA+TGG | - | chr8_2:2994841-2994860 | Msa1227640:CDS | 35.0% | |
| AATTGTCTCATTATCCCACT+TGG | - | chr8_2:2994929-2994948 | Msa1227640:CDS | 35.0% | |
| ATTCAGTAATCAGTCCAAGT+GGG | + | chr8_2:2994946-2994965 | None:intergenic | 35.0% | |
| TATTCAGTAATCAGTCCAAG+TGG | + | chr8_2:2994947-2994966 | None:intergenic | 35.0% | |
| AACAGGAACATATGCTATGA+AGG | + | chr8_2:2995038-2995057 | None:intergenic | 35.0% | |
| TCTCATTTGAAGGGTTAACT+TGG | + | chr8_2:2995114-2995133 | None:intergenic | 35.0% | |
| AAGTTAACCCTTCAAATGAG+AGG | - | chr8_2:2995113-2995132 | Msa1227640:CDS | 35.0% | |
| TTCCCATTTGCATAGATCAT+TGG | - | chr8_2:2995160-2995179 | Msa1227640:intron | 35.0% | |
| TATAATGACTGTAGGTGCTA+CGG | - | chr8_2:2995241-2995260 | Msa1227640:CDS | 35.0% | |
| ! | ACATTTTTGCATCAGTCGAA+TGG | + | chr8_2:2995306-2995325 | None:intergenic | 35.0% |
| TGATGCAAAAATGTCGTAGA+AGG | - | chr8_2:2995312-2995331 | Msa1227640:CDS | 35.0% | |
| GGCATGAGTAATTAGAACTT+CGG | + | chr8_2:2995396-2995415 | None:intergenic | 35.0% | |
| AATTGAACACATCTCGATCT+TGG | + | chr8_2:2995417-2995436 | None:intergenic | 35.0% | |
| ATTTCTATGAAGGAAGGGAT+AGG | - | chr8_2:2995438-2995457 | Msa1227640:CDS | 35.0% | |
| GTTCTTCATCAAGCAATATC+AGG | + | chr8_2:2995574-2995593 | None:intergenic | 35.0% | |
| GATATTGCTTGATGAAGAAC+AGG | - | chr8_2:2995574-2995593 | Msa1227640:five_prime_UTR | 35.0% | |
| TGATGAAGAACAGGATAGTA+AGG | - | chr8_2:2995583-2995602 | Msa1227640:five_prime_UTR | 35.0% | |
| CAAAGAAAGATCACGAAGAA+TGG | + | chr8_2:2995635-2995654 | None:intergenic | 35.0% | |
| ! | AAGCCTTTTCGTATGAAATG+GGG | - | chr8_2:2995670-2995689 | Msa1227640:five_prime_UTR | 35.0% |
| TTACCCCATTTCATACGAAA+AGG | + | chr8_2:2995676-2995695 | None:intergenic | 35.0% | |
| GAAGGATGAGAATATTCGAG+AGG | - | chr8_2:2987404-2987423 | Msa1227640:three_prime_UTR | 40.0% | |
| GAAGAAGAAAAGAAAGGGAG+AGG | - | chr8_2:2987472-2987491 | Msa1227640:three_prime_UTR | 40.0% | |
| AAGAAAAGAAAGGGAGAGGT+GGG | - | chr8_2:2987476-2987495 | Msa1227640:three_prime_UTR | 40.0% | |
| TAGTACGAAGCAGAGAAGTA+AGG | + | chr8_2:2987649-2987668 | None:intergenic | 40.0% | |
| ! | TCGTACTATGACCACTGATT+TGG | - | chr8_2:2987661-2987680 | Msa1227640:three_prime_UTR | 40.0% |
| !! | CGTACTATGACCACTGATTT+GGG | - | chr8_2:2987662-2987681 | Msa1227640:three_prime_UTR | 40.0% |
| CATCAATCTTATGTGGAGGT+TGG | + | chr8_2:2987715-2987734 | None:intergenic | 40.0% | |
| ACAATCTAATTGGCCAGACA+CGG | - | chr8_2:2987787-2987806 | Msa1227640:intron | 40.0% | |
| AGAGTTCCTCGAAAATCTTG+TGG | + | chr8_2:2988052-2988071 | None:intergenic | 40.0% | |
| GTGGATGCTTTGGTAAATTC+TGG | - | chr8_2:2988118-2988137 | Msa1227640:intron | 40.0% | |
| ! | AGAGAAGAGCATATCGATCA+CGG | + | chr8_2:2988153-2988172 | None:intergenic | 40.0% |
| GTTCCTGAGGTATGTATCTA+TGG | - | chr8_2:2988262-2988281 | Msa1227640:intron | 40.0% | |
| AACCCATAGATACATACCTC+AGG | + | chr8_2:2988268-2988287 | None:intergenic | 40.0% | |
| TGGATTGTGGACAATGATGA+AGG | + | chr8_2:2988382-2988401 | None:intergenic | 40.0% | |
| CATCTCAAAATCCGGATGAA+CGG | - | chr8_2:2988600-2988619 | Msa1227640:intron | 40.0% | |
| AGTGGGATAAACAACTCCAT+AGG | + | chr8_2:2988781-2988800 | None:intergenic | 40.0% | |
| TTCGTGGGTGAAGATTCTTA+TGG | + | chr8_2:2989407-2989426 | None:intergenic | 40.0% | |
| !! | CATGGAGTTTTTGTTGATGG+AGG | + | chr8_2:2989562-2989581 | None:intergenic | 40.0% |
| CATGGAGAAATGATATCGCA+TGG | + | chr8_2:2989588-2989607 | None:intergenic | 40.0% | |
| ! | CTAGGCTAGCTATACTATGT+AGG | + | chr8_2:2989613-2989632 | None:intergenic | 40.0% |
| CTACATAATGCAAGGGTTTG+AGG | + | chr8_2:2989682-2989701 | None:intergenic | 40.0% | |
| AGGCAGATTAATGACGATGA+CGG | - | chr8_2:2990035-2990054 | Msa1227640:intron | 40.0% | |
| ATTGAGGTGAGGCTGTATAA+TGG | + | chr8_2:2990235-2990254 | None:intergenic | 40.0% | |
| CAGAAAGAATCATTGAGGTG+AGG | + | chr8_2:2990246-2990265 | None:intergenic | 40.0% | |
| TCGGACAGAAAGAATCATTG+AGG | + | chr8_2:2990251-2990270 | None:intergenic | 40.0% | |
| ! | ATCGTGCCCATGATAATGAA+AGG | + | chr8_2:2990279-2990298 | None:intergenic | 40.0% |
| ! | GTGAAGAGCAAGTTTTCTGT+TGG | - | chr8_2:2990422-2990441 | Msa1227640:intron | 40.0% |
| !!! | TTCAACTGAACGGTTTTAGG+GGG | + | chr8_2:2990526-2990545 | None:intergenic | 40.0% |
| TGGGTAAAAAGTTGTGGAAC+CGG | - | chr8_2:2990550-2990569 | Msa1227640:intron | 40.0% | |
| AGAAAAATAAGCCCTCCCTA+TGG | + | chr8_2:2990780-2990799 | None:intergenic | 40.0% | |
| TGGGATGAATGGAAAGATAG+AGG | - | chr8_2:2990814-2990833 | Msa1227640:intron | 40.0% | |
| !!! | GAGGTATCCTTCACCTTTTT+TGG | - | chr8_2:2990833-2990852 | Msa1227640:intron | 40.0% |
| ATTAAACCCCTCTCATATGG+TGG | + | chr8_2:2991172-2991191 | None:intergenic | 40.0% | |
| TGGATTAAACCCCTCTCATA+TGG | + | chr8_2:2991175-2991194 | None:intergenic | 40.0% | |
| TAAAATCTTACGCACAGTGG+GGG | - | chr8_2:2991206-2991225 | Msa1227640:intron | 40.0% | |
| GACAAAGGAAGGAGTGAAAA+GGG | + | chr8_2:2991247-2991266 | None:intergenic | 40.0% | |
| !!! | AGTGTTTTGAGGACAAAGGA+AGG | + | chr8_2:2991258-2991277 | None:intergenic | 40.0% |
| CTACTTCTGCAAATGCCATT+GGG | - | chr8_2:2991431-2991450 | Msa1227640:intron | 40.0% | |
| TACTTCTGCAAATGCCATTG+GGG | - | chr8_2:2991432-2991451 | Msa1227640:intron | 40.0% | |
| ATGCCATTGGGGTAACTATT+TGG | - | chr8_2:2991443-2991462 | Msa1227640:intron | 40.0% | |
| GGGCTATAATTGTCTTTGCA+TGG | - | chr8_2:2991469-2991488 | Msa1227640:intron | 40.0% | |
| ATCATAGAACTGATAGAGGG+AGG | - | chr8_2:2991649-2991668 | Msa1227640:intron | 40.0% | |
| TCATAGAACTGATAGAGGGA+GGG | - | chr8_2:2991650-2991669 | Msa1227640:intron | 40.0% | |
| ACTTCATGATGGTACAGAAC+TGG | - | chr8_2:2991758-2991777 | Msa1227640:intron | 40.0% | |
| CTTCATGATGGTACAGAACT+GGG | - | chr8_2:2991759-2991778 | Msa1227640:intron | 40.0% | |
| AGCTGTTGATGTCTACACTA+TGG | - | chr8_2:2991974-2991993 | Msa1227640:intron | 40.0% | |
| TCTACACTATGGAGTTTGAG+AGG | - | chr8_2:2991985-2992004 | Msa1227640:intron | 40.0% | |
| ACCATGCAACCATACATTGA+TGG | - | chr8_2:2992264-2992283 | Msa1227640:intron | 40.0% | |
| ACCATCAATGTATGGTTGCA+TGG | + | chr8_2:2992268-2992287 | None:intergenic | 40.0% | |
| ACTCAAATTAGGAGATGCCA+AGG | + | chr8_2:2992419-2992438 | None:intergenic | 40.0% | |
| !! | CTCCTAATTTGAGTTGTTGG+CGG | - | chr8_2:2992425-2992444 | Msa1227640:intron | 40.0% |
| TACCGCCAACAACTCAAATT+AGG | + | chr8_2:2992430-2992449 | None:intergenic | 40.0% | |
| !! | AGCAGAGTATTGTGCTATTG+TGG | - | chr8_2:2992505-2992524 | Msa1227640:intron | 40.0% |
| ACTTATCTCTCACAAAGTGG+CGG | + | chr8_2:2992676-2992695 | None:intergenic | 40.0% | |
| ATCATTGGAGCCACCAATAT+CGG | + | chr8_2:2992719-2992738 | None:intergenic | 40.0% | |
| CACGTCAACCATTAGATCAT+TGG | + | chr8_2:2992734-2992753 | None:intergenic | 40.0% | |
| !!! | GGTTTTGTTTGCAAGTTTGG+TGG | - | chr8_2:2992770-2992789 | Msa1227640:CDS | 40.0% |
| GAGGGGTTTGGAAAAAAAGA+AGG | - | chr8_2:2992804-2992823 | Msa1227640:CDS | 40.0% | |
| ATATTAAGAGGGGAAGGCTT+TGG | - | chr8_2:2992848-2992867 | Msa1227640:intron | 40.0% | |
| TATTAAGAGGGGAAGGCTTT+GGG | - | chr8_2:2992849-2992868 | Msa1227640:intron | 40.0% | |
| ! | ATTGTATTGGAGGAGGGTTT+TGG | - | chr8_2:2992924-2992943 | Msa1227640:intron | 40.0% |
| CCAGCTTATGGGGAAAATAT+AGG | + | chr8_2:2993093-2993112 | None:intergenic | 40.0% | |
| ! | CCTATATTTTCCCCATAAGC+TGG | - | chr8_2:2993090-2993109 | Msa1227640:intron | 40.0% |
| CTTGTTACAACCAGCTTATG+GGG | + | chr8_2:2993103-2993122 | None:intergenic | 40.0% | |
| ! | GCTTGTTACAACCAGCTTAT+GGG | + | chr8_2:2993104-2993123 | None:intergenic | 40.0% |
| !! | AGCTTGTTACAACCAGCTTA+TGG | + | chr8_2:2993105-2993124 | None:intergenic | 40.0% |
| TAAGCTGGTTGTAACAAGCT+TGG | - | chr8_2:2993105-2993124 | Msa1227640:intron | 40.0% | |
| ! | CAGTTGATATGCACTTTGTG+TGG | + | chr8_2:2993238-2993257 | None:intergenic | 40.0% |
| ACATCTGCTGGAATGAAGAA+AGG | + | chr8_2:2993812-2993831 | None:intergenic | 40.0% | |
| AAAGAGATAAGTGTTCCAGC+TGG | - | chr8_2:2993941-2993960 | Msa1227640:intron | 40.0% | |
| AAGAGATAAGTGTTCCAGCT+GGG | - | chr8_2:2993942-2993961 | Msa1227640:intron | 40.0% | |
| CAGTAAACTCGTACATTGCA+TGG | - | chr8_2:2994269-2994288 | Msa1227640:intron | 40.0% | |
| ATGGGCGATGAAGATTGATA+AGG | + | chr8_2:2994538-2994557 | None:intergenic | 40.0% | |
| !! | AACTGGATAACGGAGAAGAA+GGG | + | chr8_2:2994593-2994612 | None:intergenic | 40.0% |
| TAACTTGGTCAGACTCGTAT+CGG | + | chr8_2:2994711-2994730 | None:intergenic | 40.0% | |
| GCTTTACTAGACATCTGATG+TGG | - | chr8_2:2994758-2994777 | Msa1227640:intron | 40.0% | |
| GGGGAATTTCTGCACATTAA+TGG | - | chr8_2:2994818-2994837 | Msa1227640:CDS | 40.0% | |
| AGGAACATATGCTATGAAGG+TGG | + | chr8_2:2995035-2995054 | None:intergenic | 40.0% | |
| ACCCTTCAAATGAGAGGAAA+AGG | - | chr8_2:2995119-2995138 | Msa1227640:CDS | 40.0% | |
| ! | GCCTTTTCCTCTCATTTGAA+GGG | + | chr8_2:2995123-2995142 | None:intergenic | 40.0% |
| ! | TGCCTTTTCCTCTCATTTGA+AGG | + | chr8_2:2995124-2995143 | None:intergenic | 40.0% |
| GGCCAATGATCTATGCAAAT+GGG | + | chr8_2:2995165-2995184 | None:intergenic | 40.0% | |
| TGGCCAATGATCTATGCAAA+TGG | + | chr8_2:2995166-2995185 | None:intergenic | 40.0% | |
| TTTGCATAGATCATTGGCCA+TGG | - | chr8_2:2995166-2995185 | Msa1227640:intron | 40.0% | |
| TTTACAACATGCTGAGACCA+TGG | + | chr8_2:2995186-2995205 | None:intergenic | 40.0% | |
| !! | GGGTTTTATATTGTGGCTGT+AGG | - | chr8_2:2995516-2995535 | Msa1227640:five_prime_UTR | 40.0% |
| TAGGAAGCCAACTGTTGTAA+TGG | - | chr8_2:2995535-2995554 | Msa1227640:five_prime_UTR | 40.0% | |
| GGATAGTAAGGACAGTAAGA+AGG | - | chr8_2:2995595-2995614 | Msa1227640:five_prime_UTR | 40.0% | |
| ATTCGAGAGGGATCGATGAA+TGG | - | chr8_2:2987417-2987436 | Msa1227640:three_prime_UTR | 45.0% | |
| TTCGAGAGGGATCGATGAAT+GGG | - | chr8_2:2987418-2987437 | Msa1227640:three_prime_UTR | 45.0% | |
| GAAGAAAAGAAAGGGAGAGG+TGG | - | chr8_2:2987475-2987494 | Msa1227640:three_prime_UTR | 45.0% | |
| GTTTGTCGTAGTAAGACGAC+AGG | + | chr8_2:2987589-2987608 | None:intergenic | 45.0% | |
| CTGGATTACATTACCGTGTC+TGG | + | chr8_2:2987803-2987822 | None:intergenic | 45.0% | |
| TCATCGCACTTTGACCACTT+TGG | - | chr8_2:2987970-2987989 | Msa1227640:intron | 45.0% | |
| AGAGAGGAATAAGCAAGCAG+AGG | - | chr8_2:2988096-2988115 | Msa1227640:intron | 45.0% | |
| GTGATCGATATGCTCTTCTC+TGG | - | chr8_2:2988152-2988171 | Msa1227640:CDS | 45.0% | |
| AGAAGGCAATTAGCTCAGCT+TGG | - | chr8_2:2988193-2988212 | Msa1227640:CDS | 45.0% | |
| ! | TCCAACAAGGTACTTGACGA+GGG | + | chr8_2:2988242-2988261 | None:intergenic | 45.0% |
| ATACCTCAGGAACTCCAACA+AGG | + | chr8_2:2988255-2988274 | None:intergenic | 45.0% | |
| !! | CGTTCATCCGGATTTTGAGA+TGG | + | chr8_2:2988602-2988621 | None:intergenic | 45.0% |
| ! | AGCTGGATTTTCCGTTCATC+CGG | + | chr8_2:2988614-2988633 | None:intergenic | 45.0% |
| TTGCGATTCATGTGCTTAGC+TGG | + | chr8_2:2988631-2988650 | None:intergenic | 45.0% | |
| ! | GTGGACTATGTGACGTCAAA+TGG | + | chr8_2:2988680-2988699 | None:intergenic | 45.0% |
| TCAGGGCTGTAATGTAGCTA+AGG | - | chr8_2:2988725-2988744 | Msa1227640:CDS | 45.0% | |
| ATCAACCTAACTCTGCTGCA+AGG | + | chr8_2:2989858-2989877 | None:intergenic | 45.0% | |
| GGCAGATTAATGACGATGAC+GGG | - | chr8_2:2990036-2990055 | Msa1227640:intron | 45.0% | |
| TGTGAGATACCTCGCATCTT+TGG | - | chr8_2:2990314-2990333 | Msa1227640:intron | 45.0% | |
| ! | ATTTGAAGCAGATGGCATGC+TGG | + | chr8_2:2990501-2990520 | None:intergenic | 45.0% |
| CATTGGAACAAGTGAACTGC+CGG | + | chr8_2:2990582-2990601 | None:intergenic | 45.0% | |
| TTTGGAGGGAGAGATGGTAA+GGG | + | chr8_2:2990739-2990758 | None:intergenic | 45.0% | |
| GTTTAGATGGAGGGTTTGGA+GGG | + | chr8_2:2990753-2990772 | None:intergenic | 45.0% | |
| TGTTTAGATGGAGGGTTTGG+AGG | + | chr8_2:2990754-2990773 | None:intergenic | 45.0% | |
| TTGGAGTTCCACCATATGAG+AGG | - | chr8_2:2991161-2991180 | Msa1227640:intron | 45.0% | |
| TGGAGTTCCACCATATGAGA+GGG | - | chr8_2:2991162-2991181 | Msa1227640:intron | 45.0% | |
| GGACAAAGGAAGGAGTGAAA+AGG | + | chr8_2:2991248-2991267 | None:intergenic | 45.0% | |
| TTTGTGACTCAGTTGGGACA+TGG | + | chr8_2:2991286-2991305 | None:intergenic | 45.0% | |
| TCCCAACTGAGTCACAAACA+CGG | - | chr8_2:2991288-2991307 | Msa1227640:intron | 45.0% | |
| CCAATGGCATTTGCAGAAGT+AGG | + | chr8_2:2991433-2991452 | None:intergenic | 45.0% | |
| CCTACTTCTGCAAATGCCAT+TGG | - | chr8_2:2991430-2991449 | Msa1227640:intron | 45.0% | |
| TTGATTGGATTCGAGCTGTC+AGG | - | chr8_2:2991577-2991596 | Msa1227640:intron | 45.0% | |
| GTTTGGTTGTCACATCACCT+TGG | - | chr8_2:2992399-2992418 | Msa1227640:intron | 45.0% | |
| TGGTGGCTCCAATGATCTAA+TGG | - | chr8_2:2992723-2992742 | Msa1227640:CDS | 45.0% | |
| ! | TTTGCAAGTTTGGTGGGGAA+GGG | - | chr8_2:2992777-2992796 | Msa1227640:CDS | 45.0% |
| ATTAAGAGGGGAAGGCTTTG+GGG | - | chr8_2:2992850-2992869 | Msa1227640:intron | 45.0% | |
| !!! | TATTGGAGGAGGGTTTTGGA+TGG | - | chr8_2:2992928-2992947 | Msa1227640:intron | 45.0% |
| TGAGCCTGAAATGAGAGAAG+AGG | - | chr8_2:2993256-2993275 | Msa1227640:intron | 45.0% | |
| AACAGATTTCCGTTCACACC+AGG | + | chr8_2:2993699-2993718 | None:intergenic | 45.0% | |
| TTCATTCCAGCAGATGTTGC+TGG | - | chr8_2:2993815-2993834 | Msa1227640:intron | 45.0% | |
| TTGCTGGTGCAGTGGAAATA+AGG | - | chr8_2:2993831-2993850 | Msa1227640:intron | 45.0% | |
| ! | TCCAGCTGGGAAAACTTTTG+AGG | - | chr8_2:2993955-2993974 | Msa1227640:intron | 45.0% |
| ! | ACCTCAAAAGTTTTCCCAGC+TGG | + | chr8_2:2993959-2993978 | None:intergenic | 45.0% |
| TGTCGCATGTTATGTGCAAC+AGG | + | chr8_2:2994065-2994084 | None:intergenic | 45.0% | |
| TTGGAGTTTGCAAGTCCTAC+CGG | - | chr8_2:2994438-2994457 | Msa1227640:intron | 45.0% | |
| ! | CTTACAATCTTTTCCCCGGT+AGG | + | chr8_2:2994456-2994475 | None:intergenic | 45.0% |
| !! | GAACTGGATAACGGAGAAGA+AGG | + | chr8_2:2994594-2994613 | None:intergenic | 45.0% |
| ! | ACTGTAGGTGCTACGGTATA+AGG | - | chr8_2:2995248-2995267 | Msa1227640:CDS | 45.0% |
| AGGTATCCTGCATAATGCAG+AGG | + | chr8_2:2995338-2995357 | None:intergenic | 45.0% | |
| TCTATGAAGGAAGGGATAGG+AGG | - | chr8_2:2995441-2995460 | Msa1227640:CDS | 45.0% | |
| ! | ATAGGAGGTGTAAAGGAGCT+GGG | - | chr8_2:2995456-2995475 | Msa1227640:CDS | 45.0% |
| !!! | AATAACTTTTAATAAATAAT+TGG | - | chr8_2:2993613-2993632 | Msa1227640:intron | 5.0% |
| TCGAGAGGGATCGATGAATG+GGG | - | chr8_2:2987419-2987438 | Msa1227640:three_prime_UTR | 50.0% | |
| TCCTCTGATTCCGATTCCGA+TGG | - | chr8_2:2987523-2987542 | Msa1227640:three_prime_UTR | 50.0% | |
| GTAGAAGCAGCCATCGGAAT+CGG | + | chr8_2:2987536-2987555 | None:intergenic | 50.0% | |
| !! | AGGGTTTGGTGCCCATAACT+AGG | - | chr8_2:2987558-2987577 | Msa1227640:three_prime_UTR | 50.0% |
| !! | GGGTTTGGTGCCCATAACTA+GGG | - | chr8_2:2987559-2987578 | Msa1227640:three_prime_UTR | 50.0% |
| GACAGGAAGGCCCTAGTTAT+GGG | + | chr8_2:2987572-2987591 | None:intergenic | 50.0% | |
| GTCGTAGTAAGACGACAGGA+AGG | + | chr8_2:2987585-2987604 | None:intergenic | 50.0% | |
| GAGAAAGAGGAGGAGTGAAG+GGG | + | chr8_2:2987613-2987632 | None:intergenic | 50.0% | |
| GGAGAAAGAGGAGGAGTGAA+GGG | + | chr8_2:2987614-2987633 | None:intergenic | 50.0% | |
| TGGAGAAAGAGGAGGAGTGA+AGG | + | chr8_2:2987615-2987634 | None:intergenic | 50.0% | |
| TGAGAGACGTCTGGAGAAAG+AGG | + | chr8_2:2987626-2987645 | None:intergenic | 50.0% | |
| GAAGTAAGGTGAGAGACGTC+TGG | + | chr8_2:2987635-2987654 | None:intergenic | 50.0% | |
| GAGGAATAAGCAAGCAGAGG+TGG | - | chr8_2:2988099-2988118 | Msa1227640:intron | 50.0% | |
| ACCCTCGTCAAGTACCTTGT+TGG | - | chr8_2:2988238-2988257 | Msa1227640:intron | 50.0% | |
| ! | CTCCAACAAGGTACTTGACG+AGG | + | chr8_2:2988243-2988262 | None:intergenic | 50.0% |
| GTACCTTGTTGGAGTTCCTG+AGG | - | chr8_2:2988249-2988268 | Msa1227640:intron | 50.0% | |
| TATCAGCCTGCAGCATGCAA+AGG | - | chr8_2:2988755-2988774 | Msa1227640:CDS | 50.0% | |
| TAACTCTGCTGCAAGGAAGG+AGG | + | chr8_2:2989851-2989870 | None:intergenic | 50.0% | |
| TCCTTCCTTGCAGCAGAGTT+AGG | - | chr8_2:2989850-2989869 | Msa1227640:intron | 50.0% | |
| ACCTAACTCTGCTGCAAGGA+AGG | + | chr8_2:2989854-2989873 | None:intergenic | 50.0% | |
| CTTATCTACTGGTAGGCCCA+TGG | - | chr8_2:2990183-2990202 | Msa1227640:intron | 50.0% | |
| GAGGTGAGGCTGTATAATGG+TGG | + | chr8_2:2990232-2990251 | None:intergenic | 50.0% | |
| ! | AGGGGGCTATTTGAAGCAGA+TGG | + | chr8_2:2990509-2990528 | None:intergenic | 50.0% |
| GTTGTGGAACCGGACAAAAC+CGG | - | chr8_2:2990560-2990579 | Msa1227640:intron | 50.0% | |
| !!! | AGTGAACTGCCGGTTTTGTC+CGG | + | chr8_2:2990572-2990591 | None:intergenic | 50.0% |
| GTTTGGAGGGAGAGATGGTA+AGG | + | chr8_2:2990740-2990759 | None:intergenic | 50.0% | |
| GGAGTTCCACCATATGAGAG+GGG | - | chr8_2:2991163-2991182 | Msa1227640:intron | 50.0% | |
| !!! | GGGGAGTGTTTTGAGGACAA+AGG | + | chr8_2:2991262-2991281 | None:intergenic | 50.0% |
| !!! | ACATGGAGGGGAGTGTTTTG+AGG | + | chr8_2:2991269-2991288 | None:intergenic | 50.0% |
| TGACTCAGTTGGGACATGGA+GGG | + | chr8_2:2991282-2991301 | None:intergenic | 50.0% | |
| GCCGTGTTTGTGACTCAGTT+GGG | + | chr8_2:2991292-2991311 | None:intergenic | 50.0% | |
| GCACAAAGAGAGACGACAGA+GGG | + | chr8_2:2991909-2991928 | None:intergenic | 50.0% | |
| TGCACAAAGAGAGACGACAG+AGG | + | chr8_2:2991910-2991929 | None:intergenic | 50.0% | |
| AGGGGAACAGTTAGCTGTCT+TGG | - | chr8_2:2991947-2991966 | Msa1227640:intron | 50.0% | |
| ! | GTTTGCAAGTTTGGTGGGGA+AGG | - | chr8_2:2992776-2992795 | Msa1227640:CDS | 50.0% |
| ! | TTAAGAGGGGAAGGCTTTGG+GGG | - | chr8_2:2992851-2992870 | Msa1227640:intron | 50.0% |
| TGGAGTTTGCAAGTCCTACC+GGG | - | chr8_2:2994439-2994458 | Msa1227640:intron | 50.0% | |
| TTGCATCAGTCGAATGGCAC+TGG | + | chr8_2:2995300-2995319 | None:intergenic | 50.0% | |
| AGAAGGCCTCTGCATTATGC+AGG | - | chr8_2:2995329-2995348 | Msa1227640:CDS | 50.0% | |
| ! | GGAAGGGATAGGAGGTGTAA+AGG | - | chr8_2:2995449-2995468 | Msa1227640:CDS | 50.0% |
| ! | GATAGGAGGTGTAAAGGAGC+TGG | - | chr8_2:2995455-2995474 | Msa1227640:CDS | 50.0% |
| GCCATCGGAATCGGAATCAG+AGG | + | chr8_2:2987527-2987546 | None:intergenic | 55.0% | |
| TCCGATGGCTGCTTCTACAG+AGG | - | chr8_2:2987538-2987557 | Msa1227640:three_prime_UTR | 55.0% | |
| CCCTCTGTAGAAGCAGCCAT+CGG | + | chr8_2:2987542-2987561 | None:intergenic | 55.0% | |
| CCGATGGCTGCTTCTACAGA+GGG | - | chr8_2:2987539-2987558 | Msa1227640:three_prime_UTR | 55.0% | |
| GGCTGCTTCTACAGAGGGTT+TGG | - | chr8_2:2987544-2987563 | Msa1227640:three_prime_UTR | 55.0% | |
| CGACAGGAAGGCCCTAGTTA+TGG | + | chr8_2:2987573-2987592 | None:intergenic | 55.0% | |
| GAGACGTCTGGAGAAAGAGG+AGG | + | chr8_2:2987623-2987642 | None:intergenic | 55.0% | |
| AGCGTTCGCGTTGTTGTCTG+AGG | + | chr8_2:2988075-2988094 | None:intergenic | 55.0% | |
| AACAACGCGAACGCTCAGAG+AGG | - | chr8_2:2988080-2988099 | Msa1227640:intron | 55.0% | |
| GCAAGCAGAGGTGGATGCTT+TGG | - | chr8_2:2988108-2988127 | Msa1227640:intron | 55.0% | |
| CATAGGCCTTTGCATGCTGC+AGG | + | chr8_2:2988764-2988783 | None:intergenic | 55.0% | |
| CTGCAGCATGCAAAGGCCTA+TGG | - | chr8_2:2988762-2988781 | Msa1227640:CDS | 55.0% | |
| ATCTACTGGTAGGCCCATGG+AGG | - | chr8_2:2990186-2990205 | Msa1227640:intron | 55.0% | |
| !! | GAGCTGGCTCGGTTTCGATT+TGG | + | chr8_2:2990465-2990484 | None:intergenic | 55.0% |
| AATCTTACGCACAGTGGGGG+TGG | - | chr8_2:2991209-2991228 | Msa1227640:intron | 55.0% | |
| ATCTTACGCACAGTGGGGGT+GGG | - | chr8_2:2991210-2991229 | Msa1227640:intron | 55.0% | |
| GACTCAGTTGGGACATGGAG+GGG | + | chr8_2:2991281-2991300 | None:intergenic | 55.0% | |
| GTGACTCAGTTGGGACATGG+AGG | + | chr8_2:2991283-2991302 | None:intergenic | 55.0% | |
| GGCCGTGTTTGTGACTCAGT+TGG | + | chr8_2:2991293-2991312 | None:intergenic | 55.0% | |
| TGAGTCACAAACACGGCCCA+AGG | - | chr8_2:2991295-2991314 | Msa1227640:intron | 55.0% | |
| GGATTCGAGCTGTCAGGTTC+AGG | - | chr8_2:2991583-2991602 | Msa1227640:intron | 55.0% | |
| AGAGGCTGTGAGCAGACACA+CGG | + | chr8_2:2991795-2991814 | None:intergenic | 55.0% | |
| TGTCTGCTCACAGCCTCTAG+AGG | - | chr8_2:2991797-2991816 | Msa1227640:intron | 55.0% | |
| ! | CAAGTTTGGTGGGGAAGGGA+GGG | - | chr8_2:2992781-2992800 | Msa1227640:CDS | 55.0% |
| ! | AAGTTTGGTGGGGAAGGGAG+GGG | - | chr8_2:2992782-2992801 | Msa1227640:CDS | 55.0% |
| !! | TAAGAGGGGAAGGCTTTGGG+GGG | - | chr8_2:2992852-2992871 | Msa1227640:intron | 55.0% |
| ACTGCACCAGCAACATCTGC+TGG | + | chr8_2:2993824-2993843 | None:intergenic | 55.0% | |
| AGCAGATGTTGCTGGTGCAG+TGG | - | chr8_2:2993823-2993842 | Msa1227640:intron | 55.0% | |
| GGAGTTTGCAAGTCCTACCG+GGG | - | chr8_2:2994440-2994459 | Msa1227640:intron | 55.0% | |
| ! | TCAGACTCGTATCGGCGGTA+AGG | + | chr8_2:2994703-2994722 | None:intergenic | 55.0% |
| CTTGGTCAGACTCGTATCGG+CGG | + | chr8_2:2994708-2994727 | None:intergenic | 55.0% | |
| !! | AATGGCACTGGCTCTGCAAC+AGG | + | chr8_2:2995288-2995307 | None:intergenic | 55.0% |
| !! | GCTCAGCTTGGCTCTGCAAC+AGG | - | chr8_2:2988205-2988224 | Msa1227640:intron | 60.0% |
| CGATGACGCTGCTCCTCCAT+GGG | + | chr8_2:2990202-2990221 | None:intergenic | 60.0% | |
| GAGGAGCAGCGTCATCGCTA+TGG | - | chr8_2:2990205-2990224 | Msa1227640:intron | 60.0% | |
| TCGAAACCGAGCCAGCTCGT+TGG | - | chr8_2:2990467-2990486 | Msa1227640:intron | 60.0% | |
| TGGTTCCTGGTCCAACGAGC+TGG | + | chr8_2:2990481-2990500 | None:intergenic | 60.0% | |
| !! | GCAGATGGCATGCTGGTTCC+TGG | + | chr8_2:2990494-2990513 | None:intergenic | 60.0% |
| GGAGGGTTTGGAGGGAGAGA+TGG | + | chr8_2:2990745-2990764 | None:intergenic | 60.0% | |
| TCTTACGCACAGTGGGGGTG+GGG | - | chr8_2:2991211-2991230 | Msa1227640:intron | 60.0% | |
| ! | GCAAGTTTGGTGGGGAAGGG+AGG | - | chr8_2:2992780-2992799 | Msa1227640:CDS | 60.0% |
| GCGATGACGCTGCTCCTCCA+TGG | + | chr8_2:2990203-2990222 | None:intergenic | 65.0% | |
| CCTGGTCCAACGAGCTGGCT+CGG | + | chr8_2:2990476-2990495 | None:intergenic | 65.0% | |
| CTTACGCACAGTGGGGGTGG+GGG | - | chr8_2:2991212-2991231 | Msa1227640:intron | 65.0% | |
| TTACGCACAGTGGGGGTGGG+GGG | - | chr8_2:2991213-2991232 | Msa1227640:intron | 65.0% | |
| TTTGGTGGGGAAGGGAGGGG+AGG | - | chr8_2:2992785-2992804 | Msa1227640:CDS | 65.0% | |
| TTGGTGGGGAAGGGAGGGGA+GGG | - | chr8_2:2992786-2992805 | Msa1227640:CDS | 65.0% | |
| !! | GGCACTGGCTCTGCAACAGG+AGG | + | chr8_2:2995285-2995304 | None:intergenic | 65.0% |
| CCGAGCCAGCTCGTTGGACC+AGG | - | chr8_2:2990473-2990492 | Msa1227640:intron | 70.0% | |
| TACGCACAGTGGGGGTGGGG+GGG | - | chr8_2:2991214-2991233 | Msa1227640:intron | 70.0% | |
| TGGTGGGGAAGGGAGGGGAG+GGG | - | chr8_2:2992787-2992806 | Msa1227640:CDS | 70.0% | |
| GGGAAGGGAGGGGAGGGGTT+TGG | - | chr8_2:2992792-2992811 | Msa1227640:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 2987317 | 2995720 | 2987317 | ID=Msa1227640;Name=Msa1227640 |
| chr8_2 | mRNA | 2987317 | 2995720 | 2987317 | ID=Msa1227640-mRNA-1;Parent=Msa1227640;Name=Msa1227640-mRNA-1;_AED=0.25;_eAED=0.25;_QI=225|0.90|0.91|1|1|1|12|406|476 |
| chr8_2 | exon | 2987317 | 2987782 | 2987317 | ID=Msa1227640-mRNA-1:exon:867;Parent=Msa1227640-mRNA-1 |
| chr8_2 | exon | 2988144 | 2988218 | 2988144 | ID=Msa1227640-mRNA-1:exon:866;Parent=Msa1227640-mRNA-1 |
| chr8_2 | exon | 2988311 | 2988346 | 2988311 | ID=Msa1227640-mRNA-1:exon:865;Parent=Msa1227640-mRNA-1 |
| chr8_2 | exon | 2988423 | 2988614 | 2988423 | ID=Msa1227640-mRNA-1:exon:864;Parent=Msa1227640-mRNA-1 |
| chr8_2 | exon | 2988713 | 2988787 | 2988713 | ID=Msa1227640-mRNA-1:exon:863;Parent=Msa1227640-mRNA-1 |
| chr8_2 | exon | 2989061 | 2989112 | 2989061 | ID=Msa1227640-mRNA-1:exon:862;Parent=Msa1227640-mRNA-1 |
| chr8_2 | exon | 2989185 | 2989247 | 2989185 | ID=Msa1227640-mRNA-1:exon:861;Parent=Msa1227640-mRNA-1 |
| chr8_2 | exon | 2991013 | 2991093 | 2991013 | ID=Msa1227640-mRNA-1:exon:860;Parent=Msa1227640-mRNA-1 |
| chr8_2 | exon | 2992723 | 2992839 | 2992723 | ID=Msa1227640-mRNA-1:exon:859;Parent=Msa1227640-mRNA-1 |
| chr8_2 | exon | 2992980 | 2993020 | 2992980 | ID=Msa1227640-mRNA-1:exon:858;Parent=Msa1227640-mRNA-1 |
| chr8_2 | exon | 2994767 | 2995138 | 2994767 | ID=Msa1227640-mRNA-1:exon:857;Parent=Msa1227640-mRNA-1 |
| chr8_2 | exon | 2995229 | 2995720 | 2995229 | ID=Msa1227640-mRNA-1:exon:856;Parent=Msa1227640-mRNA-1 |
| chr8_2 | five_prime_UTR | 2995496 | 2995720 | 2995496 | ID=Msa1227640-mRNA-1:five_prime_utr;Parent=Msa1227640-mRNA-1 |
| chr8_2 | CDS | 2995229 | 2995495 | 2995229 | ID=Msa1227640-mRNA-1:cds;Parent=Msa1227640-mRNA-1 |
| chr8_2 | CDS | 2994767 | 2995138 | 2994767 | ID=Msa1227640-mRNA-1:cds;Parent=Msa1227640-mRNA-1 |
| chr8_2 | CDS | 2992980 | 2993020 | 2992980 | ID=Msa1227640-mRNA-1:cds;Parent=Msa1227640-mRNA-1 |
| chr8_2 | CDS | 2992723 | 2992839 | 2992723 | ID=Msa1227640-mRNA-1:cds;Parent=Msa1227640-mRNA-1 |
| chr8_2 | CDS | 2991013 | 2991093 | 2991013 | ID=Msa1227640-mRNA-1:cds;Parent=Msa1227640-mRNA-1 |
| chr8_2 | CDS | 2989185 | 2989247 | 2989185 | ID=Msa1227640-mRNA-1:cds;Parent=Msa1227640-mRNA-1 |
| chr8_2 | CDS | 2989061 | 2989112 | 2989061 | ID=Msa1227640-mRNA-1:cds;Parent=Msa1227640-mRNA-1 |
| chr8_2 | CDS | 2988713 | 2988787 | 2988713 | ID=Msa1227640-mRNA-1:cds;Parent=Msa1227640-mRNA-1 |
| chr8_2 | CDS | 2988423 | 2988614 | 2988423 | ID=Msa1227640-mRNA-1:cds;Parent=Msa1227640-mRNA-1 |
| chr8_2 | CDS | 2988311 | 2988346 | 2988311 | ID=Msa1227640-mRNA-1:cds;Parent=Msa1227640-mRNA-1 |
| chr8_2 | CDS | 2988144 | 2988218 | 2988144 | ID=Msa1227640-mRNA-1:cds;Parent=Msa1227640-mRNA-1 |
| chr8_2 | CDS | 2987723 | 2987782 | 2987723 | ID=Msa1227640-mRNA-1:cds;Parent=Msa1227640-mRNA-1 |
| chr8_2 | three_prime_UTR | 2987317 | 2987722 | 2987317 | ID=Msa1227640-mRNA-1:three_prime_utr;Parent=Msa1227640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
