AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1124180


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1124180 MtrunA17_Chr7g0265041 97.595 499 12 0 1 499 1 499 0.0 1003
Msa1124180 MtrunA17_Chr7g0275681 79.472 492 91 6 1 491 1 483 0.0 784
Msa1124180 MtrunA17_Chr7g0265051 58.896 489 191 7 11 495 9 491 0.0 578
Msa1124180 MtrunA17_Chr7g0265101 58.452 491 192 8 11 495 9 493 0.0 569
Msa1124180 MtrunA17_Chr7g0265151 57.055 489 195 8 11 493 9 488 0.0 566
Msa1124180 MtrunA17_Chr4g0011051 57.841 491 196 7 11 495 9 494 0.0 563
Msa1124180 MtrunA17_Chr5g0419761 53.170 489 222 5 11 496 9 493 0.0 530
Msa1124180 MtrunA17_Chr1g0179901 47.737 486 242 7 11 490 16 495 9.81e-161 465
Msa1124180 MtrunA17_Chr5g0419771 48.041 485 241 6 11 490 36 514 9.97e-160 463
Msa1124180 MtrunA17_Chr7g0265111 51.020 490 223 9 8 489 36 516 1.96e-155 453
Msa1124180 MtrunA17_Chr7g0265141 47.967 492 241 8 3 487 1 484 1.61e-153 446
Msa1124180 MtrunA17_Chr8g0366391 42.944 496 254 12 3 488 1 477 8.24e-131 388
Msa1124180 MtrunA17_Chr4g0044511 42.324 482 257 10 11 488 40 504 3.90e-130 387
Msa1124180 MtrunA17_Chr4g0044501 40.862 487 264 10 8 488 7 475 2.98e-119 358
Msa1124180 MtrunA17_Chr4g0066151 41.068 487 247 13 14 488 21 479 3.03e-118 356
Msa1124180 MtrunA17_Chr4g0066221 42.566 491 256 12 11 493 13 485 7.10e-117 353
Msa1124180 MtrunA17_Chr7g0243631 41.837 490 263 12 8 488 10 486 1.36e-113 345
Msa1124180 MtrunA17_Chr4g0044481 42.958 426 198 7 3 423 19 404 2.59e-113 341
Msa1124180 MtrunA17_Chr4g0066281 40.121 496 258 13 11 499 14 477 8.91e-113 342
Msa1124180 MtrunA17_Chr4g0044521 39.709 481 266 8 8 486 6 464 9.82e-113 341
Msa1124180 MtrunA17_Chr7g0243951 40.600 500 280 10 1 494 1 489 3.50e-111 338
Msa1124180 MtrunA17_Chr7g0243931 40.600 500 281 10 1 494 7 496 9.69e-111 337
Msa1124180 MtrunA17_Chr7g0243681 40.121 496 272 12 1 488 1 479 4.07e-110 335
Msa1124180 MtrunA17_Chr7g0243861 41.449 497 263 11 4 488 7 487 4.43e-109 333
Msa1124180 MtrunA17_Chr4g0060511 39.474 494 286 8 1 488 1 487 1.65e-108 332
Msa1124180 MtrunA17_Chr4g0066201 40.249 482 253 13 14 488 21 474 6.03e-108 330
Msa1124180 MtrunA17_Chr4g0066171 39.669 484 256 14 14 490 24 478 8.51e-108 329
Msa1124180 MtrunA17_Chr7g0235051 39.184 490 257 9 1 487 1 452 1.50e-107 328
Msa1124180 MtrunA17_Chr4g0066261 40.519 501 263 18 11 498 13 491 2.36e-107 328
Msa1124180 MtrunA17_Chr5g0401851 39.506 486 270 12 13 488 12 483 5.36e-107 327
Msa1124180 MtrunA17_Chr5g0416741 38.367 490 285 10 4 488 6 483 6.96e-107 327
Msa1124180 MtrunA17_Chr4g0066131 38.636 484 257 13 14 485 16 471 1.42e-106 326
Msa1124180 MtrunA17_Chr2g0294931 40.891 494 255 15 14 492 14 485 3.66e-106 325
Msa1124180 MtrunA17_Chr6g0463891 38.669 481 280 9 13 488 14 484 7.03e-105 322
Msa1124180 MtrunA17_Chr8g0374971 39.798 495 267 16 14 497 15 489 3.51e-104 320
Msa1124180 MtrunA17_Chr7g0243771 40.619 485 266 11 11 488 6 475 3.21e-103 318
Msa1124180 MtrunA17_Chr7g0243871 38.788 495 271 13 13 498 11 482 1.11e-102 316
Msa1124180 MtrunA17_Chr5g0428081 40.121 496 262 15 11 494 13 485 1.35e-102 316
Msa1124180 MtrunA17_Chr2g0294921 41.309 489 256 15 11 488 162 630 3.49e-102 320
Msa1124180 MtrunA17_Chr7g0243801 40.373 483 266 11 13 488 9 476 9.55e-102 314
Msa1124180 MtrunA17_Chr4g0014061 39.248 479 263 13 14 485 12 469 3.03e-101 312
Msa1124180 MtrunA17_Chr6g0463861 39.673 489 260 14 11 490 13 475 9.77e-101 311
Msa1124180 MtrunA17_Chr8g0374931 39.673 489 264 14 11 488 13 481 1.69e-100 310
Msa1124180 MtrunA17_Chr7g0243781 37.705 488 289 8 13 498 11 485 5.01e-100 309
Msa1124180 MtrunA17_Chr8g0374901 38.430 484 269 13 14 488 15 478 3.68e-97 302
Msa1124180 MtrunA17_Chr8g0355221 37.888 483 280 13 13 488 17 486 6.61e-96 299
Msa1124180 MtrunA17_Chr8g0350881 38.105 496 280 11 12 498 13 490 1.28e-94 295
Msa1124180 MtrunA17_Chr5g0410941 38.618 492 261 15 11 488 25 489 2.37e-94 295
Msa1124180 MtrunA17_Chr7g0218311 39.184 490 262 17 11 488 18 483 2.56e-94 295
Msa1124180 MtrunA17_Chr6g0463851 40.041 492 259 15 11 488 13 482 3.93e-94 294
Msa1124180 MtrunA17_Chr7g0243851 37.827 497 245 12 1 488 1 442 2.59e-91 286
Msa1124180 MtrunA17_Chr7g0243761 36.292 507 263 11 1 494 1 460 3.53e-91 286
Msa1124180 MtrunA17_Chr5g0416821 38.477 486 261 15 13 488 16 473 1.29e-90 285
Msa1124180 MtrunA17_Chr8g0374941 39.019 469 261 12 14 474 14 465 3.23e-90 301
Msa1124180 MtrunA17_Chr8g0374941 37.500 488 278 12 14 492 952 1421 7.51e-90 300
Msa1124180 MtrunA17_Chr8g0374941 38.412 466 260 12 14 470 479 926 6.83e-84 283
Msa1124180 MtrunA17_Chr1g0165701 36.646 483 283 13 13 488 17 483 1.25e-89 283
Msa1124180 MtrunA17_Chr7g0243811 38.875 409 232 8 25 432 3 394 8.13e-86 270
Msa1124180 MtrunA17_Chr2g0294941 42.308 364 182 11 124 473 15 364 2.20e-81 258
Msa1124180 MtrunA17_Chr2g0307961 34.774 509 272 19 1 489 1 469 3.08e-70 231
Msa1124180 MtrunA17_Chr5g0440421 32.540 504 300 13 10 490 9 495 1.05e-68 228
Msa1124180 MtrunA17_Chr8g0369341 32.400 500 282 18 11 490 7 470 6.80e-63 212
Msa1124180 MtrunA17_Chr2g0329111 30.833 480 286 12 13 474 8 459 3.93e-62 211
Msa1124180 MtrunA17_Chr8g0361411 30.595 487 288 12 11 488 8 453 4.46e-62 209
Msa1124180 MtrunA17_Chr5g0420801 30.123 488 299 13 11 490 7 460 2.22e-61 208
Msa1124180 MtrunA17_Chr2g0278711 31.141 517 296 15 1 493 1 481 1.65e-59 203
Msa1124180 MtrunA17_Chr5g0426431 30.980 510 284 18 8 489 9 478 4.96e-58 199
Msa1124180 MtrunA17_Chr4g0050341 31.014 503 287 15 10 485 18 487 5.93e-58 199
Msa1124180 MtrunA17_Chr6g0453951 28.407 521 307 14 1 492 47 530 3.44e-57 198
Msa1124180 MtrunA17_Chr7g0243711 44.400 250 130 6 249 494 78 322 9.49e-57 192
Msa1124180 MtrunA17_Chr7g0243711 43.182 88 50 0 1 88 1 88 7.58e-13 69.7
Msa1124180 MtrunA17_Chr6g0454361 30.830 506 296 15 10 492 10 484 2.66e-56 195
Msa1124180 MtrunA17_Chr7g0243611 38.312 308 169 8 135 438 5 295 7.47e-56 188
Msa1124180 MtrunA17_Chr8g0357361 48.000 200 98 3 217 416 59 252 9.18e-56 187
Msa1124180 MtrunA17_Chr3g0078841 29.278 526 295 17 1 493 1 482 6.14e-55 191
Msa1124180 MtrunA17_Chr6g0454341 28.797 507 305 14 10 493 9 482 2.78e-54 189
Msa1124180 MtrunA17_Chr3g0092641 30.632 506 291 18 8 489 9 478 2.81e-54 189
Msa1124180 MtrunA17_Chr6g0454201 28.794 514 298 15 10 493 10 485 4.47e-54 189
Msa1124180 MtrunA17_Chr6g0454401 29.077 509 302 17 10 492 9 484 6.23e-54 188
Msa1124180 MtrunA17_Chr8g0336331 29.020 510 297 16 11 493 10 481 1.08e-53 188
Msa1124180 MtrunA17_Chr3g0118771 28.205 507 308 13 10 493 20 493 1.87e-53 187
Msa1124180 MtrunA17_Chr6g0454331 28.571 511 305 14 10 493 6 483 3.64e-53 186
Msa1124180 MtrunA17_Chr6g0454151 29.630 513 285 17 10 489 9 478 4.91e-53 186
Msa1124180 MtrunA17_Chr6g0454261 28.215 521 292 18 10 493 9 484 5.11e-53 186
Msa1124180 MtrunA17_Chr6g0454351 29.961 514 281 17 6 492 7 468 6.55e-53 185
Msa1124180 MtrunA17_Chr7g0217881 29.175 497 298 14 10 492 9 465 2.36e-52 184
Msa1124180 MtrunA17_Chr6g0454181 27.360 519 299 15 10 493 9 484 2.48e-52 184
Msa1124180 MtrunA17_Chr3g0118671 29.762 504 302 16 11 493 6 478 2.58e-52 184
Msa1124180 MtrunA17_Chr6g0454291 29.883 512 287 18 10 489 6 477 4.90e-52 183
Msa1124180 MtrunA17_Chr3g0118691 29.470 509 299 16 10 493 14 487 6.17e-52 183
Msa1124180 MtrunA17_Chr6g0462571 28.400 500 282 17 13 484 6 457 1.74e-51 182
Msa1124180 MtrunA17_Chr8g0335161 32.033 487 274 16 11 477 6 455 3.89e-51 181
Msa1124180 MtrunA17_Chr3g0118711 27.921 505 314 13 10 494 12 486 1.24e-50 179
Msa1124180 MtrunA17_Chr8g0359821 27.953 508 308 15 10 493 9 482 1.66e-50 179
Msa1124180 MtrunA17_Chr6g0454141 28.488 516 297 19 10 493 9 484 5.34e-50 178
Msa1124180 MtrunA17_Chr6g0464841 30.364 494 282 23 11 490 11 456 5.43e-50 177
Msa1124180 MtrunA17_Chr6g0454121 28.039 510 306 16 10 493 9 483 5.46e-50 178
Msa1124180 MtrunA17_Chr6g0462531 28.657 499 289 16 13 486 6 462 1.17e-49 176
Msa1124180 MtrunA17_Chr3g0118701 27.435 503 317 12 10 493 14 487 1.89e-49 176
Msa1124180 MtrunA17_Chr3g0112761 29.545 484 295 13 11 489 8 450 2.20e-49 176
Msa1124180 MtrunA17_Chr6g0454301 28.685 502 304 14 10 489 262 731 2.64e-49 180
Msa1124180 MtrunA17_Chr6g0454301 31.200 250 142 6 246 489 5 230 1.12e-31 129
Msa1124180 MtrunA17_Chr6g0464861 29.352 494 292 21 8 490 8 455 2.67e-49 175
Msa1124180 MtrunA17_Chr6g0454211 28.932 515 296 14 10 493 296 771 3.18e-49 180
Msa1124180 MtrunA17_Chr6g0454211 25.623 281 141 11 133 390 1 236 6.76e-20 93.2
Msa1124180 MtrunA17_Chr1g0159551 36.462 277 155 6 219 490 201 461 6.19e-49 174
Msa1124180 MtrunA17_Chr7g0231631 41.392 273 135 8 220 488 8 259 8.29e-49 169
Msa1124180 MtrunA17_Chr8g0339631 33.144 353 193 11 153 484 134 464 1.88e-48 174
Msa1124180 MtrunA17_Chr6g0453961 27.079 517 302 16 10 492 18 493 2.24e-48 174
Msa1124180 MtrunA17_Chr6g0449931 33.158 380 215 10 121 484 107 463 3.11e-48 173
Msa1124180 MtrunA17_Chr6g0454191 27.647 510 310 14 10 493 9 485 3.26e-48 173
Msa1124180 MtrunA17_Chr6g0454131 28.433 517 293 19 10 492 9 482 3.58e-48 173
Msa1124180 MtrunA17_Chr6g0486251 30.658 486 276 17 13 477 8 453 4.65e-48 172
Msa1124180 MtrunA17_Chr6g0486201 30.658 486 276 17 13 477 8 453 4.65e-48 172
Msa1124180 MtrunA17_Chr6g0462551 28.834 489 293 12 12 481 5 457 9.58e-48 172
Msa1124180 MtrunA17_Chr5g0412111 29.842 506 286 20 7 488 1 461 2.72e-47 170
Msa1124180 MtrunA17_Chr8g0335141 30.723 498 267 18 10 477 8 457 2.79e-47 170
Msa1124180 MtrunA17_Chr6g0464871 29.328 491 291 19 11 490 23 468 3.03e-47 170
Msa1124180 MtrunA17_Chr6g0454321 28.138 494 299 14 11 481 10 470 3.26e-47 173
Msa1124180 MtrunA17_Chr8g0347281 30.083 482 286 14 10 477 17 461 3.41e-47 170
Msa1124180 MtrunA17_Chr1g0207971 28.800 500 288 21 11 492 8 457 3.96e-47 169
Msa1124180 MtrunA17_Chr6g0462541 27.551 490 301 14 13 484 6 459 4.81e-47 170
Msa1124180 MtrunA17_Chr1g0173121 35.018 277 158 6 219 490 205 464 6.24e-47 169
Msa1124180 MtrunA17_Chr6g0452771 28.431 510 303 17 10 492 9 483 8.89e-47 169
Msa1124180 MtrunA17_Chr3g0098111 28.773 497 305 15 11 491 9 472 9.82e-47 169
Msa1124180 MtrunA17_Chr5g0442541 27.655 499 304 15 13 491 7 468 1.45e-46 168
Msa1124180 MtrunA17_Chr5g0412101 29.116 498 300 16 8 488 9 470 2.22e-46 168
Msa1124180 MtrunA17_Chr3g0112771 30.584 497 277 16 13 494 14 457 4.05e-46 167
Msa1124180 MtrunA17_Chr5g0414321 27.600 500 305 15 1 490 1 453 4.20e-46 167
Msa1124180 MtrunA17_Chr2g0302961 28.803 493 304 18 12 490 8 467 5.13e-46 167
Msa1124180 MtrunA17_Chr5g0442601 29.249 506 304 19 13 494 406 881 1.01e-45 171
Msa1124180 MtrunA17_Chr5g0442601 30.031 323 183 13 101 413 44 333 8.67e-26 111
Msa1124180 MtrunA17_Chr8g0382021 29.388 490 293 18 16 490 39 490 1.10e-45 166
Msa1124180 MtrunA17_Chr1g0207981 28.367 490 311 13 11 489 13 473 1.18e-45 166
Msa1124180 MtrunA17_Chr8g0336651 29.762 504 285 17 6 482 776 1237 1.33e-45 171
Msa1124180 MtrunA17_Chr8g0336651 35.238 315 157 8 195 484 168 460 6.95e-40 154
Msa1124180 MtrunA17_Chr8g0336651 36.466 266 125 6 221 484 547 770 7.29e-36 142
Msa1124180 MtrunA17_Chr5g0414331 28.138 494 286 19 8 485 10 450 1.74e-45 165
Msa1124180 MtrunA17_Chr3g0121991 28.715 498 304 18 11 488 79 545 1.78e-45 167
Msa1124180 MtrunA17_Chr6g0459311 30.372 484 280 15 13 477 15 460 2.84e-45 165
Msa1124180 MtrunA17_Chr3g0079731 27.821 514 288 18 13 486 8 478 2.95e-45 165
Msa1124180 MtrunA17_Chr5g0412131 28.715 498 297 16 10 488 11 469 3.35e-45 164
Msa1124180 MtrunA17_Chr3g0118721 34.164 281 161 6 217 493 34 294 3.60e-45 160
Msa1124180 MtrunA17_Chr3g0118751 26.772 508 285 15 10 493 5 449 6.06e-45 163
Msa1124180 MtrunA17_Chr1g0207831 28.485 495 308 21 12 495 11 470 6.95e-45 164
Msa1124180 MtrunA17_Chr8g0336691 29.142 501 294 18 6 484 914 1375 9.33e-45 169
Msa1124180 MtrunA17_Chr8g0336691 27.218 496 300 13 11 484 13 469 2.87e-43 164
Msa1124180 MtrunA17_Chr8g0336691 28.514 498 269 19 6 482 475 906 4.43e-38 149
Msa1124180 MtrunA17_Chr7g0275511 28.884 502 286 19 10 484 14 471 1.14e-44 163
Msa1124180 MtrunA17_Chr6g0462521 27.347 490 293 15 13 486 6 448 1.65e-44 162
Msa1124180 MtrunA17_Chr8g0361371 29.268 492 294 14 14 485 10 467 1.73e-44 163
Msa1124180 MtrunA17_Chr5g0423981 26.210 496 297 15 10 492 9 448 1.80e-44 162
Msa1124180 MtrunA17_Chr5g0442521 27.811 507 303 19 13 491 7 478 2.07e-44 162
Msa1124180 MtrunA17_Chr8g0334851 34.262 359 187 13 148 484 134 465 2.63e-44 162
Msa1124180 MtrunA17_Chr8g0373301 33.243 370 201 11 126 477 114 455 2.84e-44 162
Msa1124180 MtrunA17_Chr8g0347271 29.752 484 285 16 10 477 18 462 3.04e-44 162
Msa1124180 MtrunA17_Chr6g0464881 28.717 491 300 18 10 492 10 458 4.36e-44 161
Msa1124180 MtrunA17_Chr1g0207951 27.613 507 297 20 5 491 117 573 4.87e-44 166
Msa1124180 MtrunA17_Chr1g0207951 26.789 489 301 18 19 491 664 1111 2.37e-39 152
Msa1124180 MtrunA17_Chr5g0442581 27.327 505 319 15 13 496 7 484 6.34e-44 162
Msa1124180 MtrunA17_Chr8g0339601 36.861 274 136 8 219 476 66 318 1.89e-43 156
Msa1124180 MtrunA17_Chr8g0339451 34.943 352 170 15 149 477 137 452 2.26e-43 159
Msa1124180 MtrunA17_Chr1g0207861 27.362 508 298 17 11 491 8 471 3.93e-43 159
Msa1124180 MtrunA17_Chr7g0232411 35.216 301 164 8 196 484 180 461 6.73e-43 158
Msa1124180 MtrunA17_Chr5g0429711 28.427 496 290 18 12 488 12 461 7.49e-43 158
Msa1124180 MtrunA17_Chr7g0250001 28.916 498 288 20 8 490 3 449 1.04e-42 157
Msa1124180 MtrunA17_Chr8g0334861 29.487 390 231 8 116 485 95 460 1.43e-42 157
Msa1124180 MtrunA17_Chr6g0464921 29.878 492 290 21 8 488 8 455 2.20e-42 157
Msa1124180 MtrunA17_Chr5g0442561 26.786 504 309 17 13 491 7 475 3.01e-42 157
Msa1124180 MtrunA17_Chr5g0448521 26.157 497 316 14 13 491 7 470 3.15e-42 156
Msa1124180 MtrunA17_Chr7g0232391 27.879 495 297 17 11 484 6 461 3.45e-42 156
Msa1124180 MtrunA17_Chr7g0218791 26.994 489 280 15 10 477 4 436 4.11e-42 155
Msa1124180 MtrunA17_Chr7g0218821 27.198 489 289 17 7 477 1 440 5.62e-42 155
Msa1124180 MtrunA17_Chr7g0232401 35.161 310 158 8 195 481 171 460 5.82e-42 155
Msa1124180 MtrunA17_Chr2g0302991 28.032 503 292 19 12 490 8 464 5.94e-42 155
Msa1124180 MtrunA17_Chr5g0442511 28.016 489 287 17 21 493 59 498 7.06e-42 156
Msa1124180 MtrunA17_Chr8g0377921 27.579 504 300 16 10 489 2 464 7.86e-42 155
Msa1124180 MtrunA17_Chr3g0122001 28.942 501 299 19 11 488 486 952 9.31e-42 159
Msa1124180 MtrunA17_Chr3g0122001 27.856 499 308 18 11 488 6 473 2.60e-40 155
Msa1124180 MtrunA17_Chr8g0339461 32.955 352 184 14 153 477 134 460 1.06e-41 155
Msa1124180 MtrunA17_Chr5g0442491 27.146 501 313 15 13 491 7 477 1.17e-41 155
Msa1124180 MtrunA17_Chr8g0336731 35.759 316 156 8 195 485 194 487 1.21e-41 155
Msa1124180 MtrunA17_Chr7g0218841 27.812 489 284 15 10 485 5 437 1.27e-41 154
Msa1124180 MtrunA17_Chr8g0334831 29.000 500 294 16 14 485 9 475 2.03e-41 154
Msa1124180 MtrunA17_Chr7g0243911 42.574 202 109 5 273 472 18 214 2.75e-41 147
Msa1124180 MtrunA17_Chr1g0161351 27.309 498 305 15 11 488 37 497 4.11e-41 154
Msa1124180 MtrunA17_Chr7g0218831 27.959 490 281 16 10 485 5 436 6.41e-41 152
Msa1124180 MtrunA17_Chr5g0426401 32.602 319 189 8 176 489 14 311 6.76e-41 149
Msa1124180 MtrunA17_Chr8g0336741 36.156 307 149 8 195 476 175 459 9.36e-41 152
Msa1124180 MtrunA17_Chr8g0339441 43.256 215 96 7 276 477 217 418 1.10e-40 151
Msa1124180 MtrunA17_Chr4g0053501 26.337 505 307 19 4 489 7 465 1.42e-40 152
Msa1124180 MtrunA17_Chr4g0032331 26.819 481 294 16 12 480 9 443 1.91e-40 151
Msa1124180 MtrunA17_Chr5g0431401 25.000 484 312 12 11 488 10 448 6.14e-40 150
Msa1124180 MtrunA17_Chr4g0072761 34.232 371 196 13 125 486 119 450 6.57e-40 150
Msa1124180 MtrunA17_Chr5g0431441 25.553 497 306 13 11 490 18 467 7.62e-40 150
Msa1124180 MtrunA17_Chr6g0454271 29.688 320 187 8 180 493 4 291 9.05e-40 145
Msa1124180 MtrunA17_Chr4g0066141 49.398 166 69 6 330 488 194 351 1.15e-39 147
Msa1124180 MtrunA17_Chr4g0066141 31.771 192 111 6 40 231 9 180 4.07e-23 100
Msa1124180 MtrunA17_Chr3g0118661 27.800 500 306 18 10 487 12 478 1.23e-39 149
Msa1124180 MtrunA17_Chr8g0365811 25.963 493 304 18 19 488 503 957 1.26e-39 153
Msa1124180 MtrunA17_Chr8g0365811 26.429 420 264 10 19 416 17 413 1.82e-33 135
Msa1124180 MtrunA17_Chr5g0431361 26.186 485 308 13 11 488 12 453 1.49e-39 149
Msa1124180 MtrunA17_Chr5g0409591 26.078 464 260 15 14 427 7 437 1.63e-39 149
Msa1124180 MtrunA17_Chr6g0454251 29.777 403 247 11 10 390 6 394 2.08e-39 147
Msa1124180 MtrunA17_Chr7g0232331 30.769 351 210 10 148 484 131 462 2.35e-39 149
Msa1124180 MtrunA17_Chr8g0380531 28.803 493 291 19 11 488 10 457 3.78e-39 148
Msa1124180 MtrunA17_Chr8g0336251 29.130 460 290 12 11 460 7 440 4.44e-39 148
Msa1124180 MtrunA17_Chr8g0336321 28.664 464 287 12 11 460 7 440 5.47e-39 147
Msa1124180 MtrunA17_Chr4g0053321 27.689 502 299 21 13 494 28 485 8.37e-39 147
Msa1124180 MtrunA17_Chr7g0241781 27.789 475 264 16 3 466 1 407 9.54e-39 146
Msa1124180 MtrunA17_Chr1g0153451 35.870 276 142 8 221 484 207 459 1.06e-38 147
Msa1124180 MtrunA17_Chr1g0153461 39.908 218 110 4 276 484 3 208 1.08e-38 140
Msa1124180 MtrunA17_Chr5g0431371 25.466 483 311 10 11 488 10 448 4.15e-38 145
Msa1124180 MtrunA17_Chr8g0370941 27.360 519 304 16 11 491 8 491 4.54e-38 145
Msa1124180 MtrunA17_Chr7g0249931 27.345 501 288 21 11 490 40 485 5.72e-38 145
Msa1124180 MtrunA17_Chr7g0232311 31.498 327 188 10 165 477 148 452 8.69e-38 144
Msa1124180 MtrunA17_Chr7g0241801 28.205 468 255 15 11 466 9 407 1.15e-37 143
Msa1124180 MtrunA17_Chr5g0429681 27.530 494 298 20 12 486 45 497 2.23e-37 144
Msa1124180 MtrunA17_Chr7g0232341 36.000 275 146 8 221 484 207 462 3.81e-37 142
Msa1124180 MtrunA17_Chr7g0249981 26.923 494 307 17 8 492 22 470 4.14e-37 142
Msa1124180 MtrunA17_Chr5g0431421 25.662 491 302 12 11 489 10 449 5.09e-37 142
Msa1124180 MtrunA17_Chr2g0278721 26.891 476 296 14 8 465 513 954 5.91e-37 145
Msa1124180 MtrunA17_Chr2g0278721 27.975 479 292 18 2 466 5 444 1.12e-35 141
Msa1124180 MtrunA17_Chr7g0218811 27.027 481 283 17 10 477 14 439 6.03e-37 141
Msa1124180 MtrunA17_Chr6g0454221 36.321 212 115 4 276 487 38 229 8.46e-37 137
Msa1124180 MtrunA17_Chr3g0106231 25.361 485 308 11 11 490 18 453 1.40e-36 141
Msa1124180 MtrunA17_Chr1g0207931 32.103 271 167 8 220 488 242 497 5.00e-36 140
Msa1124180 MtrunA17_Chr6g0454171 31.525 295 145 10 209 492 65 313 6.41e-36 135
Msa1124180 MtrunA17_Chr5g0448551 29.009 424 255 18 6 415 2 393 1.16e-35 138
Msa1124180 MtrunA17_Chr6g0464091 27.137 468 293 15 11 466 18 449 1.71e-35 138
Msa1124180 MtrunA17_Chr5g0401721 27.846 492 312 15 19 496 16 478 2.86e-35 137
Msa1124180 MtrunA17_Chr4g0042891 28.715 498 292 20 11 486 7 463 7.22e-35 136
Msa1124180 MtrunA17_Chr7g0265071 92.754 69 5 0 431 499 1 69 1.06e-34 124
Msa1124180 MtrunA17_Chr4g0040691 28.024 496 303 21 11 493 8 462 1.31e-34 135
Msa1124180 MtrunA17_Chr8g0367221 28.916 415 254 13 9 407 796 1185 1.35e-34 139
Msa1124180 MtrunA17_Chr8g0367221 28.434 415 255 13 9 407 10 398 4.45e-34 137
Msa1124180 MtrunA17_Chr8g0367221 27.338 417 258 11 9 407 1286 1675 5.40e-32 130
Msa1124180 MtrunA17_Chr2g0278741 27.696 473 289 18 8 466 93 526 1.39e-34 136
Msa1124180 MtrunA17_Chr8g0377941 27.054 499 301 21 12 491 10 464 2.14e-34 135
Msa1124180 MtrunA17_Chr4g0040711 27.733 494 307 19 11 493 8 462 2.74e-34 134
Msa1124180 MtrunA17_Chr4g0042931 27.236 492 305 16 11 486 7 461 6.53e-34 133
Msa1124180 MtrunA17_Chr1g0196851 25.586 469 300 12 2 459 40 470 1.03e-33 133
Msa1124180 MtrunA17_Chr8g0355011 27.068 399 192 10 120 493 42 366 5.15e-33 129
Msa1124180 MtrunA17_Chr6g0454371 34.694 196 104 4 299 492 1 174 6.24e-33 123
Msa1124180 MtrunA17_Chr7g0243921 35.514 214 127 5 4 216 33 236 6.32e-33 125
Msa1124180 MtrunA17_Chr6g0466831 26.096 479 287 18 6 466 13 442 9.63e-33 130
Msa1124180 MtrunA17_Chr4g0069611 26.383 470 299 15 5 466 9 439 5.70e-32 127
Msa1124180 MtrunA17_Chr6g0466841 26.042 480 286 18 6 466 13 442 1.53e-31 126
Msa1124180 MtrunA17_Chr3g0106251 27.372 274 174 3 217 490 47 295 2.28e-31 123
Msa1124180 MtrunA17_Chr5g0403641 27.866 506 273 19 11 487 59 501 3.80e-31 126
Msa1124180 MtrunA17_Chr4g0072771 31.283 374 203 15 125 486 132 463 8.40e-31 124
Msa1124180 MtrunA17_Chr2g0302851 26.471 476 286 19 8 466 12 440 5.48e-30 122
Msa1124180 MtrunA17_Chr5g0432731 25.857 321 208 5 174 490 4 298 7.97e-30 118
Msa1124180 MtrunA17_Chr5g0393591 23.647 499 302 12 11 499 17 446 1.75e-29 120
Msa1124180 MtrunA17_Chr4g0029131 25.877 456 294 12 11 459 12 430 3.96e-29 121
Msa1124180 MtrunA17_Chr7g0249961 34.579 214 119 7 276 489 68 260 6.03e-29 115
Msa1124180 MtrunA17_Chr4g0029151 26.293 464 282 17 11 459 20 438 6.72e-29 119
Msa1124180 MtrunA17_Chr3g0079711 36.735 196 102 6 302 486 2 186 7.32e-29 112
Msa1124180 MtrunA17_Chr6g0482061 27.789 493 293 19 11 476 11 467 1.09e-28 118
Msa1124180 MtrunA17_Chr2g0319801 29.032 465 279 18 11 463 8 433 2.39e-28 117
Msa1124180 MtrunA17_Chr2g0283041 24.652 503 313 17 8 495 4 455 6.20e-28 116
Msa1124180 MtrunA17_Chr7g0232351 36.715 207 111 6 196 390 180 378 7.90e-28 114
Msa1124180 MtrunA17_Chr5g0427571 32.549 255 144 7 222 466 45 281 1.94e-27 112
Msa1124180 MtrunA17_Chr3g0092031 34.043 188 107 4 279 466 6 176 6.53e-27 107
Msa1124180 MtrunA17_Chr8g0336261 44.715 123 52 3 299 415 1 113 3.26e-26 103
Msa1124180 MtrunA17_Chr8g0337381 43.704 135 62 2 350 484 1 121 1.61e-25 101
Msa1124180 MtrunA17_Chr7g0272701 34.109 129 83 1 102 228 24 152 2.34e-23 96.3
Msa1124180 MtrunA17_Chr7g0243731 56.338 71 31 0 348 418 6 76 2.79e-23 93.6
Msa1124180 MtrunA17_Chr4g0039881 26.020 392 247 12 21 400 2 362 3.48e-23 102
Msa1124180 MtrunA17_Chr2g0319731 27.097 465 288 18 11 463 25 450 3.48e-23 102
Msa1124180 MtrunA17_Chr7g0231651 31.401 207 132 5 4 207 7 206 2.14e-21 92.4
Msa1124180 MtrunA17_Chr5g0431431 26.217 267 148 8 167 408 82 324 8.29e-21 94.0
Msa1124180 MtrunA17_Chr2g0319761 24.459 462 304 16 11 463 8 433 6.71e-20 92.4
Msa1124180 MtrunA17_Chr1g0207881 33.784 148 87 4 344 491 251 387 7.89e-20 91.7
Msa1124180 MtrunA17_Chr6g0454231 26.277 274 138 9 221 490 7 220 8.37e-20 92.0
Msa1124180 MtrunA17_Chr2g0319791 25.316 474 296 21 7 463 1 433 3.59e-18 87.0
Msa1124180 MtrunA17_Chr7g0243721 42.609 115 56 4 214 322 25 135 4.14e-18 81.3
Msa1124180 MtrunA17_Chr2g0319751 25.486 463 298 17 11 463 485 910 1.38e-17 86.3
Msa1124180 MtrunA17_Chr2g0319751 24.043 470 283 19 7 463 1 409 1.15e-16 83.2
Msa1124180 MtrunA17_Chr4g0029161 24.123 456 274 15 11 459 12 402 2.09e-16 81.3
Msa1124180 MtrunA17_Chr2g0321331 33.898 177 89 5 287 463 94 242 1.67e-15 76.6
Msa1124180 MtrunA17_Chr6g0453981 26.293 232 153 7 133 350 1 228 2.85e-15 75.1
Msa1124180 MtrunA17_Chr4g0066241 30.233 129 82 3 174 300 37 159 8.73e-14 69.3
Msa1124180 MtrunA17_Chr4g0066251 50.746 67 30 2 11 77 13 76 2.90e-12 62.4
Msa1124180 MtrunA17_Chr6g0453941 26.144 153 96 3 180 326 119 260 1.02e-11 65.5
Msa1124180 MtrunA17_Chr7g0250021 25.758 330 197 14 11 323 12 310 3.42e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1124180 AT2G36800.1 55.263 494 212 6 1 490 1 489 0.0 555
Msa1124180 AT2G36750.1 54.620 487 215 4 11 496 10 491 0.0 553
Msa1124180 AT2G36760.1 55.328 488 207 6 11 494 14 494 0.0 549
Msa1124180 AT2G36770.1 55.967 486 207 5 11 494 14 494 0.0 549
Msa1124180 AT2G36780.1 55.785 484 203 6 11 490 14 490 0.0 544
Msa1124180 AT2G36790.1 55.350 486 210 5 11 494 13 493 0.0 539
Msa1124180 AT3G53150.1 52.104 499 221 7 11 495 22 516 0.0 518
Msa1124180 AT3G53160.1 52.165 485 221 8 11 491 8 485 1.02e-176 506
Msa1124180 AT2G15490.3 41.615 483 265 7 11 488 7 477 9.45e-132 391
Msa1124180 AT2G15490.1 41.649 485 265 7 11 488 7 480 1.12e-131 391
Msa1124180 AT2G15480.2 39.308 491 275 7 11 488 10 490 8.82e-129 384
Msa1124180 AT4G34131.1 42.029 483 262 8 11 488 10 479 1.55e-128 382
Msa1124180 AT2G15480.1 39.752 483 274 7 11 488 10 480 9.74e-128 380
Msa1124180 AT4G34138.1 42.623 488 250 11 11 488 11 478 5.35e-125 374
Msa1124180 AT4G34135.1 40.994 483 268 8 11 488 11 481 2.65e-117 354
Msa1124180 AT2G16890.2 32.600 500 286 16 11 494 9 473 3.60e-73 239
Msa1124180 AT5G14860.1 34.185 509 271 16 11 492 8 479 2.21e-72 238
Msa1124180 AT4G34135.2 37.618 319 192 4 11 324 11 327 5.97e-70 227
Msa1124180 AT1G73880.1 31.772 491 288 13 11 490 14 468 1.01e-69 230
Msa1124180 AT2G16890.3 34.043 423 238 13 11 418 9 405 4.15e-68 225
Msa1124180 AT1G51210.1 32.974 464 253 16 10 464 19 433 5.13e-66 219
Msa1124180 AT1G10400.1 33.198 491 280 17 11 488 7 462 1.84e-64 216
Msa1124180 AT5G03490.1 30.629 493 286 14 6 487 14 461 5.18e-64 215
Msa1124180 AT1G22400.1 32.233 515 288 18 6 494 8 487 8.31e-64 215
Msa1124180 AT1G06000.1 29.857 489 269 13 10 488 9 433 5.77e-59 201
Msa1124180 AT1G22360.1 30.159 504 292 16 11 489 10 478 2.42e-58 201
Msa1124180 AT1G78270.1 30.709 508 286 14 10 489 12 481 1.60e-57 199
Msa1124180 AT1G22340.1 29.800 500 308 12 6 488 8 481 2.66e-55 192
Msa1124180 AT1G22380.1 30.709 508 296 18 5 489 7 481 5.22e-55 192
Msa1124180 AT1G22360.2 29.563 504 283 16 11 489 10 466 9.33e-55 191
Msa1124180 AT1G22370.2 30.972 494 298 16 10 489 12 476 1.38e-54 191
Msa1124180 AT5G12890.1 29.821 503 301 14 13 492 12 485 1.86e-54 190
Msa1124180 AT5G49690.1 33.732 418 232 15 11 418 10 392 5.21e-53 186
Msa1124180 AT3G11340.1 29.719 498 272 18 10 489 8 445 3.32e-52 183
Msa1124180 AT5G05870.1 29.979 487 298 15 8 488 5 454 1.17e-51 182
Msa1124180 AT2G30150.2 27.992 493 291 11 11 490 13 454 1.04e-50 179
Msa1124180 AT2G29740.1 30.120 498 293 20 12 488 11 474 4.79e-50 178
Msa1124180 AT2G30150.1 27.869 488 288 11 16 490 2 438 1.77e-49 176
Msa1124180 AT5G05860.1 30.123 488 290 13 8 489 6 448 2.14e-49 176
Msa1124180 AT1G01420.2 29.259 499 290 17 1 477 1 458 3.06e-49 176
Msa1124180 AT1G01420.1 29.293 495 287 17 5 477 2 455 3.14e-49 176
Msa1124180 AT2G31750.1 29.388 490 291 17 13 490 10 456 5.80e-49 175
Msa1124180 AT2G31750.2 29.388 490 291 16 13 490 10 456 1.35e-48 174
Msa1124180 AT4G01070.1 28.400 500 290 16 10 484 7 463 1.57e-48 174
Msa1124180 AT2G18570.1 28.283 495 293 17 7 478 1 456 1.96e-47 171
Msa1124180 AT3G02100.1 28.231 503 288 14 10 491 12 462 3.73e-47 170
Msa1124180 AT1G07250.1 27.888 502 313 17 12 494 7 478 3.00e-46 168
Msa1124180 AT5G65550.1 30.043 466 272 15 11 461 9 435 3.93e-46 167
Msa1124180 AT5G59590.1 26.875 480 301 14 4 477 3 438 3.56e-45 164
Msa1124180 AT2G30140.1 26.815 496 288 11 11 488 13 451 4.37e-45 164
Msa1124180 AT4G36770.1 27.812 489 279 16 11 471 4 446 5.29e-45 164
Msa1124180 AT1G24100.1 27.812 489 301 13 11 488 11 458 7.07e-45 164
Msa1124180 AT4G15490.1 26.430 507 304 19 11 492 8 470 8.32e-45 164
Msa1124180 AT5G05880.1 27.565 497 291 15 8 488 5 448 1.85e-44 162
Msa1124180 AT2G30140.2 26.761 497 286 13 11 488 13 450 1.99e-44 162
Msa1124180 AT1G01390.2 28.313 498 284 17 1 458 15 479 6.45e-44 162
Msa1124180 AT4G15550.1 27.689 502 304 19 9 489 11 474 7.99e-44 161
Msa1124180 AT2G29730.1 26.477 491 315 15 12 489 6 463 9.46e-44 161
Msa1124180 AT2G29710.1 25.662 491 327 16 12 493 6 467 5.34e-43 159
Msa1124180 AT1G01390.1 28.340 494 281 17 5 458 2 462 5.74e-43 159
Msa1124180 AT2G18560.1 34.182 275 149 6 219 481 115 369 2.55e-42 155
Msa1124180 AT5G05890.1 28.485 495 293 13 8 488 5 452 4.32e-42 156
Msa1124180 AT5G26310.1 28.400 500 287 17 6 478 2 457 5.92e-42 156
Msa1124180 AT5G05900.1 27.092 502 286 18 8 488 5 447 7.10e-42 155
Msa1124180 AT3G16520.3 34.672 274 150 7 218 486 208 457 7.31e-42 155
Msa1124180 AT2G36970.1 25.341 513 316 17 4 491 3 473 1.02e-41 155
Msa1124180 AT5G59580.1 26.441 503 281 17 11 488 9 447 1.30e-41 155
Msa1124180 AT4G14090.1 27.721 487 299 17 10 487 12 454 1.62e-41 154
Msa1124180 AT4G15480.1 26.761 497 314 16 8 488 16 478 6.09e-41 154
Msa1124180 AT2G26480.1 25.859 495 311 12 5 491 2 448 6.89e-41 153
Msa1124180 AT1G07260.1 28.144 501 300 20 12 489 9 472 3.50e-40 151
Msa1124180 AT2G23250.1 28.631 482 284 18 17 488 4 435 3.84e-40 150
Msa1124180 AT3G46700.1 26.939 490 286 15 3 477 1 433 4.11e-40 150
Msa1124180 AT1G05675.1 27.236 492 293 15 11 485 6 449 8.23e-40 150
Msa1124180 AT5G17030.1 26.506 498 290 19 13 490 16 457 1.20e-39 149
Msa1124180 AT1G05680.1 27.778 486 282 17 11 477 6 441 1.29e-39 149
Msa1124180 AT3G21760.1 26.744 516 309 19 12 493 5 485 1.88e-39 149
Msa1124180 AT2G22590.1 28.361 476 273 15 11 463 15 445 1.94e-39 149
Msa1124180 AT3G21800.1 26.769 523 286 23 12 490 8 477 3.35e-39 149
Msa1124180 AT5G66690.1 28.257 499 289 17 6 478 2 457 5.18e-39 148
Msa1124180 AT3G46690.1 26.707 498 300 14 3 486 1 447 5.60e-39 147
Msa1124180 AT1G07240.1 32.013 303 188 8 190 489 189 476 6.80e-39 148
Msa1124180 AT2G31790.1 27.475 495 274 18 11 477 8 445 8.45e-39 147
Msa1124180 AT4G15500.1 26.122 490 318 17 10 489 8 463 9.39e-39 147
Msa1124180 AT3G21560.1 25.859 495 318 15 10 488 11 472 9.42e-39 147
Msa1124180 AT3G16520.2 37.931 203 112 5 218 415 208 401 2.10e-38 145
Msa1124180 AT4G15260.1 32.213 357 198 13 153 491 27 357 2.15e-38 144
Msa1124180 AT3G55700.1 26.613 496 299 15 13 493 10 455 2.16e-38 146
Msa1124180 AT3G16520.1 36.404 228 122 6 218 440 208 417 2.34e-38 145
Msa1124180 AT2G29750.1 33.681 288 165 11 208 493 215 478 2.39e-38 146
Msa1124180 AT3G46670.1 28.067 481 278 15 13 478 11 438 3.53e-38 145
Msa1124180 AT3G50740.1 27.416 507 295 20 7 482 3 467 3.81e-38 146
Msa1124180 AT2G28080.1 28.150 508 277 22 16 491 23 474 6.18e-38 145
Msa1124180 AT3G46660.1 27.673 477 287 15 13 478 16 445 2.04e-37 143
Msa1124180 AT2G23260.1 27.789 493 292 17 11 488 10 453 2.23e-37 143
Msa1124180 AT3G46720.1 28.247 485 284 14 3 478 1 430 2.45e-37 143
Msa1124180 AT3G46680.1 27.629 485 280 18 11 478 9 439 2.59e-37 143
Msa1124180 AT3G21790.1 26.938 516 316 19 12 498 5 488 3.09e-37 143
Msa1124180 AT1G22370.1 31.773 299 178 8 196 489 29 306 3.20e-37 139
Msa1124180 AT3G46650.1 27.215 474 270 15 13 476 12 420 4.30e-37 142
Msa1124180 AT3G21780.1 29.082 392 234 13 121 491 103 471 2.12e-36 141
Msa1124180 AT5G38010.1 27.600 500 284 16 11 488 10 453 4.39e-36 139
Msa1124180 AT5G17040.1 28.571 371 228 13 123 490 105 441 4.43e-36 139
Msa1124180 AT2G43820.1 27.254 488 303 20 11 491 7 449 4.43e-36 139
Msa1124180 AT1G05530.1 26.096 502 299 18 10 489 4 455 4.62e-36 139
Msa1124180 AT2G43840.2 26.735 490 297 18 11 488 7 446 5.73e-36 139
Msa1124180 AT2G16890.4 31.776 321 185 12 11 316 9 310 6.24e-36 136
Msa1124180 AT2G16890.1 31.776 321 185 12 11 316 9 310 6.24e-36 136
Msa1124180 AT2G43840.1 26.735 490 297 18 11 488 7 446 9.58e-36 138
Msa1124180 AT4G15280.1 27.362 508 303 19 12 490 5 475 1.22e-35 139
Msa1124180 AT4G15280.2 27.362 508 303 19 12 490 37 507 2.42e-35 138
Msa1124180 AT1G05560.1 28.081 495 293 20 10 488 4 451 5.85e-35 137
Msa1124180 AT3G55710.1 26.369 493 310 15 13 494 10 460 1.25e-34 135
Msa1124180 AT1G05560.2 28.081 495 293 20 10 488 54 501 1.26e-34 136
Msa1124180 AT5G17040.2 31.786 280 162 8 211 490 89 339 1.57e-34 133
Msa1124180 AT5G17050.1 31.673 281 159 8 211 490 210 458 1.14e-33 133
Msa1124180 AT5G38040.1 27.236 492 276 18 19 488 18 449 2.68e-33 131
Msa1124180 AT3G22250.1 24.950 501 307 20 10 488 7 460 4.87e-32 128
Msa1124180 AT2G15490.2 32.796 186 118 3 11 191 7 190 5.17e-32 124
Msa1124180 AT1G30530.1 25.400 500 289 18 12 490 16 452 4.06e-31 125
Msa1124180 AT1G64910.1 26.282 468 279 15 11 466 6 419 1.24e-30 124
Msa1124180 AT2G22930.1 27.887 459 281 18 11 465 6 418 1.38e-30 124
Msa1124180 AT4G27570.1 26.327 471 275 15 11 469 7 417 7.38e-29 119
Msa1124180 AT3G29630.1 28.051 467 299 14 11 473 6 439 9.29e-29 119
Msa1124180 AT4G27560.1 26.552 467 279 15 11 469 7 417 7.46e-28 116
Msa1124180 AT4G09500.2 28.478 460 279 17 11 466 6 419 7.61e-28 116
Msa1124180 AT3G21750.1 24.603 504 321 17 11 491 4 471 9.66e-28 116
Msa1124180 AT5G53990.1 25.813 461 290 15 11 466 6 419 2.58e-26 111
Msa1124180 AT5G54010.1 25.726 482 295 16 11 484 6 432 9.35e-24 104
Msa1124180 AT1G50580.1 26.483 472 296 16 11 472 6 436 5.61e-22 99.0
Msa1124180 AT5G37950.1 25.632 277 178 9 125 390 84 343 2.11e-21 95.9
Msa1124180 AT5G37950.2 25.818 275 174 10 125 390 84 337 3.67e-21 95.1
Msa1124180 AT5G54060.1 26.277 411 255 16 13 406 15 394 1.84e-20 94.4
Msa1124180 AT1G64920.1 24.892 462 295 15 11 465 6 422 4.80e-20 93.2
Msa1124180 AT4G09500.1 35.638 188 109 4 279 466 219 394 1.36e-19 91.3
Msa1124180 AT3G29630.2 33.163 196 128 2 279 473 220 413 1.71e-19 91.3
Msa1124180 AT4G01070.2 25.134 374 222 14 9 357 6 346 4.99e-17 82.8

Find 79 sgRNAs with CRISPR-Local

Find 216 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCATTTATTTGGGTTATT+AGG 0.082328 7_3:-75298762 Msa1124180:CDS
CAAACATAAACAACAGATTT+TGG 0.188263 7_3:+75298856 None:intergenic
CTTTCTCGTGCTGTTTCTTC+TGG 0.208524 7_3:-75299543 Msa1124180:CDS
TCCATTTATTTGGGTTATTA+GGG 0.257459 7_3:-75298761 Msa1124180:CDS
TCCCTAATAACCCAAATAAA+TGG 0.262232 7_3:+75298760 None:intergenic
GAGATAATGCAACTTGGTTT+TGG 0.285528 7_3:+75299345 None:intergenic
ACAACTTATTGAATTGGCTT+TGG 0.313920 7_3:-75298803 Msa1124180:CDS
CAACTTATTGAATTGGCTTT+GGG 0.324638 7_3:-75298802 Msa1124180:CDS
TCCTTCACAACTTATTGAAT+TGG 0.328350 7_3:-75298809 Msa1124180:CDS
TGGGGAGAGGAAGAGAAATT+AGG 0.332295 7_3:-75298442 Msa1124180:CDS
ACACTTGAAGGGGTAAGTTT+TGG 0.355382 7_3:-75298574 Msa1124180:CDS
AATGTGGCCTTGTGCTATTA+AGG 0.356754 7_3:+75299662 None:intergenic
CACCCTCCATTGCATGTTCA+AGG 0.363554 7_3:-75299241 Msa1124180:CDS
GGAAGAGGACTTATAATTAG+AGG 0.369456 7_3:-75298670 Msa1124180:CDS
TCTTCCTCTCCCCACTTCAA+TGG 0.382180 7_3:+75298451 None:intergenic
ATATTATCACATTCTTCAAT+TGG 0.388820 7_3:-75298628 Msa1124180:CDS
AAGTTTGAGGAAAGGAATAA+AGG 0.389160 7_3:-75298691 Msa1124180:CDS
CAACAAAGATGGTTTAGATA+AGG 0.393148 7_3:-75298944 Msa1124180:CDS
GGGTTACAAGTTTGATTTGA+AGG 0.407161 7_3:+75299520 None:intergenic
TCGAAATTCTCGCAACCATC+TGG 0.415028 7_3:+75299468 None:intergenic
ATATGTTAATGATTACAAAA+AGG 0.417587 7_3:-75299010 Msa1124180:CDS
TTGAGGATTGGAGTGAGTCT+TGG 0.418604 7_3:-75298484 Msa1124180:CDS
TCTTTGTTGCAAAGTGCAAC+AGG 0.420174 7_3:+75298958 None:intergenic
ATTAGGTGTAGTTGTGAAGA+AGG 0.440802 7_3:-75298425 Msa1124180:CDS
TGCAGTTTCCTTGCTTCAAA+AGG 0.442568 7_3:-75299397 Msa1124180:CDS
TGTGATAATATCACCATTTG+TGG 0.442976 7_3:+75298640 None:intergenic
AATTTATAAAAGTGAAGAGT+TGG 0.446438 7_3:-75298734 Msa1124180:CDS
AGAGAAAGGGCTAGTGAACT+TGG 0.466709 7_3:-75298340 Msa1124180:CDS
GAAGCTGAAATGAAATCATA+TGG 0.470511 7_3:-75299069 Msa1124180:CDS
AATAATGGCCAAGTTATCAT+TGG 0.473706 7_3:+75298547 None:intergenic
TCTGTTGTTTATGTTTGTCT+TGG 0.481477 7_3:-75298850 Msa1124180:CDS
GAAGAAGGAAGTTATTAAAG+AGG 0.481479 7_3:-75298410 Msa1124180:CDS
GTTGCACTTTGCAACAAAGA+TGG 0.481793 7_3:-75298955 Msa1124180:CDS
TAGAGGGTGGGCCCCACAAA+TGG 0.489245 7_3:-75298653 Msa1124180:CDS
GATTAGTGATGAAAAGTTTG+AGG 0.489897 7_3:-75298704 Msa1124180:CDS
ATGTGGCCTTGTGCTATTAA+GGG 0.490527 7_3:+75299663 None:intergenic
AAACCATGGAATGAAATCCT+TGG 0.492801 7_3:+75299273 None:intergenic
AGGTAAGAAATGATAAGGTT+TGG 0.505595 7_3:-75298990 Msa1124180:CDS
GAGTAAAGAGAGAAGAGAAA+GGG 0.506105 7_3:-75298353 Msa1124180:CDS
AGTGAAAGAGGAAAAGATGA+AGG 0.506840 7_3:-75299112 Msa1124180:CDS
TTGGTGTACCAATGATAACT+TGG 0.507348 7_3:-75298555 Msa1124180:CDS
TTATCACATTCTTCAATTGG+TGG 0.512435 7_3:-75298625 Msa1124180:CDS
AATGATAAGGTTTGGTGTGT+TGG 0.518019 7_3:-75298982 Msa1124180:CDS
GTGATAATATCACCATTTGT+GGG 0.524159 7_3:+75298641 None:intergenic
GGTTGGAATTCAACACTTGA+AGG 0.524519 7_3:-75298586 Msa1124180:CDS
TTTATTTGGGTTATTAGGGA+AGG 0.529565 7_3:-75298757 Msa1124180:CDS
GCCAATTCAATAAGTTGTGA+AGG 0.529773 7_3:+75298808 None:intergenic
AGAGTAAAGAGAGAAGAGAA+AGG 0.531044 7_3:-75298354 Msa1124180:CDS
GAGGAAAGGAATAAAGGAAG+AGG 0.533642 7_3:-75298685 Msa1124180:CDS
GAAGAGGACTTATAATTAGA+GGG 0.533771 7_3:-75298669 Msa1124180:CDS
GAGTTGAATTTCCATTGAAG+TGG 0.533871 7_3:-75298462 Msa1124180:CDS
ATTCCAAGGATTTCATTCCA+TGG 0.536945 7_3:-75299276 Msa1124180:CDS
GATACCAGGAACAGTGAAAG+AGG 0.542581 7_3:-75299124 Msa1124180:CDS
GTGATGAAAAGTTTGAGGAA+AGG 0.545461 7_3:-75298699 Msa1124180:CDS
GTTTCCTTGCTTCAAAAGGA+AGG 0.551819 7_3:-75299393 Msa1124180:CDS
AGTTGAATTTCCATTGAAGT+GGG 0.556714 7_3:-75298461 Msa1124180:CDS
GTGAAAGAGGAAAAGATGAA+GGG 0.559698 7_3:-75299111 Msa1124180:CDS
ATTTCCATTGAAGTGGGGAG+AGG 0.563986 7_3:-75298455 Msa1124180:CDS
AAGGGAAATAACACAAAGTG+TGG 0.580044 7_3:+75299681 None:intergenic
TGTCTATCATTGGGATAATG+TGG 0.581455 7_3:+75299646 None:intergenic
TGAAAGAGGAAAAGATGAAG+GGG 0.597981 7_3:-75299110 Msa1124180:CDS
GTTGGAATTCAACACTTGAA+GGG 0.598355 7_3:-75298585 Msa1124180:CDS
GTCACAAAAGAACAGATACC+AGG 0.600200 7_3:-75299138 Msa1124180:CDS
AAATCAGAGATAATGCAACT+TGG 0.600269 7_3:+75299339 None:intergenic
TTGGAATTCAACACTTGAAG+GGG 0.605118 7_3:-75298584 Msa1124180:CDS
TTTGAAGCAAGGAAACTGCA+TGG 0.606448 7_3:+75299400 None:intergenic
AAACAAGTTGGATTACCAGA+TGG 0.606732 7_3:-75299483 Msa1124180:CDS
TGTGTACCTTGAACATGCAA+TGG 0.612530 7_3:+75299235 None:intergenic
AGGACTTATAATTAGAGGGT+GGG 0.612847 7_3:-75298665 Msa1124180:CDS
GAGGACTTATAATTAGAGGG+TGG 0.614085 7_3:-75298666 Msa1124180:CDS
TTATTTCCCTTAATAGCACA+AGG 0.627711 7_3:-75299669 Msa1124180:CDS
GTTGAATTTCCATTGAAGTG+GGG 0.641339 7_3:-75298460 Msa1124180:CDS
GTACCTTGAACATGCAATGG+AGG 0.658506 7_3:+75299238 None:intergenic
TGATAATATCACCATTTGTG+GGG 0.664196 7_3:+75298642 None:intergenic
TACCTTGAACATGCAATGGA+GGG 0.667815 7_3:+75299239 None:intergenic
GGTTTAGATAAGGCTCAAAG+AGG 0.681265 7_3:-75298934 Msa1124180:CDS
TGGTTGCGAGAATTTCGACA+TGG 0.685831 7_3:-75299463 Msa1124180:CDS
AATATGCAATGTGATGAATG+AGG 0.691994 7_3:-75298386 Msa1124180:CDS
GCAAAACTCTTAGCACAACG+TGG 0.754542 7_3:-75299621 Msa1124180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATGTTAATGATTACAAAA+AGG - chr7_3:75298929-75298948 Msa1124180:CDS 15.0%
!! AACAAAAATTCCATTTATTT+GGG - chr7_3:75299169-75299188 Msa1124180:CDS 15.0%
!! ATATGTTAATGATTACAAAA+AGG - chr7_3:75298929-75298948 Msa1124180:CDS 15.0%
!! AACAAAAATTCCATTTATTT+GGG - chr7_3:75299169-75299188 Msa1124180:CDS 15.0%
!!! TTGTTTTGATGGAAAATTTA+GGG + chr7_3:75298442-75298461 None:intergenic 20.0%
!! CAACAAAAATTCCATTTATT+TGG - chr7_3:75299168-75299187 Msa1124180:CDS 20.0%
!! AATTTATAAAAGTGAAGAGT+TGG - chr7_3:75299205-75299224 Msa1124180:CDS 20.0%
!! ATATTATCACATTCTTCAAT+TGG - chr7_3:75299311-75299330 Msa1124180:CDS 20.0%
!!! TTGTTTTGATGGAAAATTTA+GGG + chr7_3:75298442-75298461 None:intergenic 20.0%
!! CAACAAAAATTCCATTTATT+TGG - chr7_3:75299168-75299187 Msa1124180:CDS 20.0%
!! AATTTATAAAAGTGAAGAGT+TGG - chr7_3:75299205-75299224 Msa1124180:CDS 20.0%
!! ATATTATCACATTCTTCAAT+TGG - chr7_3:75299311-75299330 Msa1124180:CDS 20.0%
!!! ATTTTTTGGTGTAGTGAATA+TGG + chr7_3:75298355-75298374 None:intergenic 25.0%
!!! CTTGTTTTGATGGAAAATTT+AGG + chr7_3:75298443-75298462 None:intergenic 25.0%
!! AATTTTCCATCAAAACAAGT+TGG - chr7_3:75298444-75298463 Msa1124180:CDS 25.0%
!! TGTAATCATAAACAGTTTTG+AGG - chr7_3:75298893-75298912 Msa1124180:CDS 25.0%
! CAAAAAGGTAAGAAATGATA+AGG - chr7_3:75298944-75298963 Msa1124180:CDS 25.0%
!! CAAACATAAACAACAGATTT+TGG + chr7_3:75299086-75299105 None:intergenic 25.0%
!! TTCCATTTATTTGGGTTATT+AGG - chr7_3:75299177-75299196 Msa1124180:CDS 25.0%
!! TCCATTTATTTGGGTTATTA+GGG - chr7_3:75299178-75299197 Msa1124180:CDS 25.0%
! AAAAATTGGTCAGCAAATAA+TGG + chr7_3:75299410-75299429 None:intergenic 25.0%
! CAAGTTTCTCATTCAAAAAT+TGG + chr7_3:75299424-75299443 None:intergenic 25.0%
!!! ATTTTTTGGTGTAGTGAATA+TGG + chr7_3:75298355-75298374 None:intergenic 25.0%
!!! CTTGTTTTGATGGAAAATTT+AGG + chr7_3:75298443-75298462 None:intergenic 25.0%
!! AATTTTCCATCAAAACAAGT+TGG - chr7_3:75298444-75298463 Msa1124180:CDS 25.0%
!! TGTAATCATAAACAGTTTTG+AGG - chr7_3:75298893-75298912 Msa1124180:CDS 25.0%
! CAAAAAGGTAAGAAATGATA+AGG - chr7_3:75298944-75298963 Msa1124180:CDS 25.0%
!! CAAACATAAACAACAGATTT+TGG + chr7_3:75299086-75299105 None:intergenic 25.0%
!! TTCCATTTATTTGGGTTATT+AGG - chr7_3:75299177-75299196 Msa1124180:CDS 25.0%
!! TCCATTTATTTGGGTTATTA+GGG - chr7_3:75299178-75299197 Msa1124180:CDS 25.0%
! AAAAATTGGTCAGCAAATAA+TGG + chr7_3:75299410-75299429 None:intergenic 25.0%
! CAAGTTTCTCATTCAAAAAT+TGG + chr7_3:75299424-75299443 None:intergenic 25.0%
TTATTTCCCTTAATAGCACA+AGG - chr7_3:75298270-75298289 Msa1124180:CDS 30.0%
!! GTTTTGCTATGTCTATCATT+GGG + chr7_3:75298305-75298324 None:intergenic 30.0%
!! AGTTTTGCTATGTCTATCAT+TGG + chr7_3:75298306-75298325 None:intergenic 30.0%
!!! GTAAAACGTGATGCATTTTT+TGG + chr7_3:75298369-75298388 None:intergenic 30.0%
AAATCAGAGATAATGCAACT+TGG + chr7_3:75298603-75298622 None:intergenic 30.0%
! TCTCTGATTTTTGCATAACT+TGG - chr7_3:75298613-75298632 Msa1124180:CDS 30.0%
! TTTGTGACTTGAATTTTGTC+AGG + chr7_3:75298789-75298808 None:intergenic 30.0%
GAAGCTGAAATGAAATCATA+TGG - chr7_3:75298870-75298889 Msa1124180:CDS 30.0%
AGGTAAGAAATGATAAGGTT+TGG - chr7_3:75298949-75298968 Msa1124180:CDS 30.0%
CAACAAAGATGGTTTAGATA+AGG - chr7_3:75298995-75299014 Msa1124180:CDS 30.0%
! TCTGTTGTTTATGTTTGTCT+TGG - chr7_3:75299089-75299108 Msa1124180:CDS 30.0%
TCCTTCACAACTTATTGAAT+TGG - chr7_3:75299130-75299149 Msa1124180:CDS 30.0%
! ACAACTTATTGAATTGGCTT+TGG - chr7_3:75299136-75299155 Msa1124180:CDS 30.0%
!! CAACTTATTGAATTGGCTTT+GGG - chr7_3:75299137-75299156 Msa1124180:CDS 30.0%
TCCCTAATAACCCAAATAAA+TGG + chr7_3:75299182-75299201 None:intergenic 30.0%
! TTTATTTGGGTTATTAGGGA+AGG - chr7_3:75299182-75299201 Msa1124180:CDS 30.0%
AAAGTGAAGAGTTGGAAAAA+TGG - chr7_3:75299213-75299232 Msa1124180:CDS 30.0%
GATTAGTGATGAAAAGTTTG+AGG - chr7_3:75299235-75299254 Msa1124180:CDS 30.0%
AAGTTTGAGGAAAGGAATAA+AGG - chr7_3:75299248-75299267 Msa1124180:CDS 30.0%
GAAGAGGACTTATAATTAGA+GGG - chr7_3:75299270-75299289 Msa1124180:CDS 30.0%
TGATAATATCACCATTTGTG+GGG + chr7_3:75299300-75299319 None:intergenic 30.0%
GTGATAATATCACCATTTGT+GGG + chr7_3:75299301-75299320 None:intergenic 30.0%
TGTGATAATATCACCATTTG+TGG + chr7_3:75299302-75299321 None:intergenic 30.0%
TTATCACATTCTTCAATTGG+TGG - chr7_3:75299314-75299333 Msa1124180:CDS 30.0%
AATAATGGCCAAGTTATCAT+TGG + chr7_3:75299395-75299414 None:intergenic 30.0%
!!! AACTTGTTACTCAAGTTTTG+AGG - chr7_3:75299438-75299457 Msa1124180:CDS 30.0%
AGTTGAATTTCCATTGAAGT+GGG - chr7_3:75299478-75299497 Msa1124180:CDS 30.0%
GAAGAAGGAAGTTATTAAAG+AGG - chr7_3:75299529-75299548 Msa1124180:CDS 30.0%
AATATGCAATGTGATGAATG+AGG - chr7_3:75299553-75299572 Msa1124180:CDS 30.0%
GCAAAAAAAGCTGTTGAAAA+AGG - chr7_3:75299629-75299648 Msa1124180:CDS 30.0%
AAAAAAGCTGTTGAAAAAGG+TGG - chr7_3:75299632-75299651 Msa1124180:CDS 30.0%
TTATTTCCCTTAATAGCACA+AGG - chr7_3:75298270-75298289 Msa1124180:CDS 30.0%
!! GTTTTGCTATGTCTATCATT+GGG + chr7_3:75298305-75298324 None:intergenic 30.0%
!! AGTTTTGCTATGTCTATCAT+TGG + chr7_3:75298306-75298325 None:intergenic 30.0%
!!! GTAAAACGTGATGCATTTTT+TGG + chr7_3:75298369-75298388 None:intergenic 30.0%
AAATCAGAGATAATGCAACT+TGG + chr7_3:75298603-75298622 None:intergenic 30.0%
! TCTCTGATTTTTGCATAACT+TGG - chr7_3:75298613-75298632 Msa1124180:CDS 30.0%
! TTTGTGACTTGAATTTTGTC+AGG + chr7_3:75298789-75298808 None:intergenic 30.0%
GAAGCTGAAATGAAATCATA+TGG - chr7_3:75298870-75298889 Msa1124180:CDS 30.0%
AGGTAAGAAATGATAAGGTT+TGG - chr7_3:75298949-75298968 Msa1124180:CDS 30.0%
CAACAAAGATGGTTTAGATA+AGG - chr7_3:75298995-75299014 Msa1124180:CDS 30.0%
! TCTGTTGTTTATGTTTGTCT+TGG - chr7_3:75299089-75299108 Msa1124180:CDS 30.0%
TCCTTCACAACTTATTGAAT+TGG - chr7_3:75299130-75299149 Msa1124180:CDS 30.0%
! ACAACTTATTGAATTGGCTT+TGG - chr7_3:75299136-75299155 Msa1124180:CDS 30.0%
!! CAACTTATTGAATTGGCTTT+GGG - chr7_3:75299137-75299156 Msa1124180:CDS 30.0%
TCCCTAATAACCCAAATAAA+TGG + chr7_3:75299182-75299201 None:intergenic 30.0%
! TTTATTTGGGTTATTAGGGA+AGG - chr7_3:75299182-75299201 Msa1124180:CDS 30.0%
AAAGTGAAGAGTTGGAAAAA+TGG - chr7_3:75299213-75299232 Msa1124180:CDS 30.0%
GATTAGTGATGAAAAGTTTG+AGG - chr7_3:75299235-75299254 Msa1124180:CDS 30.0%
AAGTTTGAGGAAAGGAATAA+AGG - chr7_3:75299248-75299267 Msa1124180:CDS 30.0%
GAAGAGGACTTATAATTAGA+GGG - chr7_3:75299270-75299289 Msa1124180:CDS 30.0%
TGATAATATCACCATTTGTG+GGG + chr7_3:75299300-75299319 None:intergenic 30.0%
GTGATAATATCACCATTTGT+GGG + chr7_3:75299301-75299320 None:intergenic 30.0%
TGTGATAATATCACCATTTG+TGG + chr7_3:75299302-75299321 None:intergenic 30.0%
TTATCACATTCTTCAATTGG+TGG - chr7_3:75299314-75299333 Msa1124180:CDS 30.0%
AATAATGGCCAAGTTATCAT+TGG + chr7_3:75299395-75299414 None:intergenic 30.0%
!!! AACTTGTTACTCAAGTTTTG+AGG - chr7_3:75299438-75299457 Msa1124180:CDS 30.0%
AGTTGAATTTCCATTGAAGT+GGG - chr7_3:75299478-75299497 Msa1124180:CDS 30.0%
GAAGAAGGAAGTTATTAAAG+AGG - chr7_3:75299529-75299548 Msa1124180:CDS 30.0%
AATATGCAATGTGATGAATG+AGG - chr7_3:75299553-75299572 Msa1124180:CDS 30.0%
GCAAAAAAAGCTGTTGAAAA+AGG - chr7_3:75299629-75299648 Msa1124180:CDS 30.0%
AAAAAAGCTGTTGAAAAAGG+TGG - chr7_3:75299632-75299651 Msa1124180:CDS 30.0%
AAGGGAAATAACACAAAGTG+TGG + chr7_3:75298261-75298280 None:intergenic 35.0%
TGTCTATCATTGGGATAATG+TGG + chr7_3:75298296-75298315 None:intergenic 35.0%
!! GGGTTACAAGTTTGATTTGA+AGG + chr7_3:75298422-75298441 None:intergenic 35.0%
!!! GGTAATCCAACTTGTTTTGA+TGG + chr7_3:75298453-75298472 None:intergenic 35.0%
! AAACAAGTTGGATTACCAGA+TGG - chr7_3:75298456-75298475 Msa1124180:CDS 35.0%
! GAGATAATGCAACTTGGTTT+TGG + chr7_3:75298597-75298616 None:intergenic 35.0%
CTGAAAAACATCACATTCCA+AGG - chr7_3:75298649-75298668 Msa1124180:CDS 35.0%
ATTCCAAGGATTTCATTCCA+TGG - chr7_3:75298663-75298682 Msa1124180:CDS 35.0%
AAACCATGGAATGAAATCCT+TGG + chr7_3:75298669-75298688 None:intergenic 35.0%
! ACAGAGTTTTTCTCTATTCC+TGG - chr7_3:75298759-75298778 Msa1124180:CDS 35.0%
AGTGAAAGAGGAAAAGATGA+AGG - chr7_3:75298827-75298846 Msa1124180:CDS 35.0%
GTGAAAGAGGAAAAGATGAA+GGG - chr7_3:75298828-75298847 Msa1124180:CDS 35.0%
TGAAAGAGGAAAAGATGAAG+GGG - chr7_3:75298829-75298848 Msa1124180:CDS 35.0%
!! AATGATAAGGTTTGGTGTGT+TGG - chr7_3:75298957-75298976 Msa1124180:CDS 35.0%
GCCAATTCAATAAGTTGTGA+AGG + chr7_3:75299134-75299153 None:intergenic 35.0%
GTGATGAAAAGTTTGAGGAA+AGG - chr7_3:75299240-75299259 Msa1124180:CDS 35.0%
GGAAGAGGACTTATAATTAG+AGG - chr7_3:75299269-75299288 Msa1124180:CDS 35.0%
AGGACTTATAATTAGAGGGT+GGG - chr7_3:75299274-75299293 Msa1124180:CDS 35.0%
!! GATTTTTGACTCATTGTGGT+TGG - chr7_3:75299336-75299355 Msa1124180:CDS 35.0%
GTTGGAATTCAACACTTGAA+GGG - chr7_3:75299354-75299373 Msa1124180:CDS 35.0%
TTGGAATTCAACACTTGAAG+GGG - chr7_3:75299355-75299374 Msa1124180:CDS 35.0%
TTGGTGTACCAATGATAACT+TGG - chr7_3:75299384-75299403 Msa1124180:CDS 35.0%
!!! GTTACTCAAGTTTTGAGGAT+TGG - chr7_3:75299443-75299462 Msa1124180:CDS 35.0%
GAGTTGAATTTCCATTGAAG+TGG - chr7_3:75299477-75299496 Msa1124180:CDS 35.0%
GTTGAATTTCCATTGAAGTG+GGG - chr7_3:75299479-75299498 Msa1124180:CDS 35.0%
ATTAGGTGTAGTTGTGAAGA+AGG - chr7_3:75299514-75299533 Msa1124180:CDS 35.0%
AGAGTAAAGAGAGAAGAGAA+AGG - chr7_3:75299585-75299604 Msa1124180:CDS 35.0%
GAGTAAAGAGAGAAGAGAAA+GGG - chr7_3:75299586-75299605 Msa1124180:CDS 35.0%
AAGGGAAATAACACAAAGTG+TGG + chr7_3:75298261-75298280 None:intergenic 35.0%
TGTCTATCATTGGGATAATG+TGG + chr7_3:75298296-75298315 None:intergenic 35.0%
!! GGGTTACAAGTTTGATTTGA+AGG + chr7_3:75298422-75298441 None:intergenic 35.0%
!!! GGTAATCCAACTTGTTTTGA+TGG + chr7_3:75298453-75298472 None:intergenic 35.0%
! AAACAAGTTGGATTACCAGA+TGG - chr7_3:75298456-75298475 Msa1124180:CDS 35.0%
! GAGATAATGCAACTTGGTTT+TGG + chr7_3:75298597-75298616 None:intergenic 35.0%
CTGAAAAACATCACATTCCA+AGG - chr7_3:75298649-75298668 Msa1124180:CDS 35.0%
ATTCCAAGGATTTCATTCCA+TGG - chr7_3:75298663-75298682 Msa1124180:CDS 35.0%
AAACCATGGAATGAAATCCT+TGG + chr7_3:75298669-75298688 None:intergenic 35.0%
! ACAGAGTTTTTCTCTATTCC+TGG - chr7_3:75298759-75298778 Msa1124180:CDS 35.0%
AGTGAAAGAGGAAAAGATGA+AGG - chr7_3:75298827-75298846 Msa1124180:CDS 35.0%
GTGAAAGAGGAAAAGATGAA+GGG - chr7_3:75298828-75298847 Msa1124180:CDS 35.0%
TGAAAGAGGAAAAGATGAAG+GGG - chr7_3:75298829-75298848 Msa1124180:CDS 35.0%
!! AATGATAAGGTTTGGTGTGT+TGG - chr7_3:75298957-75298976 Msa1124180:CDS 35.0%
GCCAATTCAATAAGTTGTGA+AGG + chr7_3:75299134-75299153 None:intergenic 35.0%
GTGATGAAAAGTTTGAGGAA+AGG - chr7_3:75299240-75299259 Msa1124180:CDS 35.0%
GGAAGAGGACTTATAATTAG+AGG - chr7_3:75299269-75299288 Msa1124180:CDS 35.0%
AGGACTTATAATTAGAGGGT+GGG - chr7_3:75299274-75299293 Msa1124180:CDS 35.0%
!! GATTTTTGACTCATTGTGGT+TGG - chr7_3:75299336-75299355 Msa1124180:CDS 35.0%
GTTGGAATTCAACACTTGAA+GGG - chr7_3:75299354-75299373 Msa1124180:CDS 35.0%
TTGGAATTCAACACTTGAAG+GGG - chr7_3:75299355-75299374 Msa1124180:CDS 35.0%
TTGGTGTACCAATGATAACT+TGG - chr7_3:75299384-75299403 Msa1124180:CDS 35.0%
!!! GTTACTCAAGTTTTGAGGAT+TGG - chr7_3:75299443-75299462 Msa1124180:CDS 35.0%
GAGTTGAATTTCCATTGAAG+TGG - chr7_3:75299477-75299496 Msa1124180:CDS 35.0%
GTTGAATTTCCATTGAAGTG+GGG - chr7_3:75299479-75299498 Msa1124180:CDS 35.0%
ATTAGGTGTAGTTGTGAAGA+AGG - chr7_3:75299514-75299533 Msa1124180:CDS 35.0%
AGAGTAAAGAGAGAAGAGAA+AGG - chr7_3:75299585-75299604 Msa1124180:CDS 35.0%
GAGTAAAGAGAGAAGAGAAA+GGG - chr7_3:75299586-75299605 Msa1124180:CDS 35.0%
!! ATGTGGCCTTGTGCTATTAA+GGG + chr7_3:75298279-75298298 None:intergenic 40.0%
!! AATGTGGCCTTGTGCTATTA+AGG + chr7_3:75298280-75298299 None:intergenic 40.0%
! TTTGAAGCAAGGAAACTGCA+TGG + chr7_3:75298542-75298561 None:intergenic 40.0%
TGCAGTTTCCTTGCTTCAAA+AGG - chr7_3:75298542-75298561 Msa1124180:CDS 40.0%
GTTTCCTTGCTTCAAAAGGA+AGG - chr7_3:75298546-75298565 Msa1124180:CDS 40.0%
!!! TTCACCTTCCTTTTGAAGCA+AGG + chr7_3:75298553-75298572 None:intergenic 40.0%
GGGTGAAACAACAAAAACCA+TGG + chr7_3:75298683-75298702 None:intergenic 40.0%
TACCTTGAACATGCAATGGA+GGG + chr7_3:75298703-75298722 None:intergenic 40.0%
TGTGTACCTTGAACATGCAA+TGG + chr7_3:75298707-75298726 None:intergenic 40.0%
! TGAATTTTGTCAGGTATGCC+AGG + chr7_3:75298780-75298799 None:intergenic 40.0%
GTCACAAAAGAACAGATACC+AGG - chr7_3:75298801-75298820 Msa1124180:CDS 40.0%
! TTTTCCTCTTTCACTGTTCC+TGG + chr7_3:75298822-75298841 None:intergenic 40.0%
TCTTTGTTGCAAAGTGCAAC+AGG + chr7_3:75298984-75299003 None:intergenic 40.0%
GTTGCACTTTGCAACAAAGA+TGG - chr7_3:75298984-75299003 Msa1124180:CDS 40.0%
GGTTTAGATAAGGCTCAAAG+AGG - chr7_3:75299005-75299024 Msa1124180:CDS 40.0%
GAGGAAAGGAATAAAGGAAG+AGG - chr7_3:75299254-75299273 Msa1124180:CDS 40.0%
GAGGACTTATAATTAGAGGG+TGG - chr7_3:75299273-75299292 Msa1124180:CDS 40.0%
!! GGTGGATTTTTGACTCATTG+TGG - chr7_3:75299332-75299351 Msa1124180:CDS 40.0%
GGTTGGAATTCAACACTTGA+AGG - chr7_3:75299353-75299372 Msa1124180:CDS 40.0%
! ACACTTGAAGGGGTAAGTTT+TGG - chr7_3:75299365-75299384 Msa1124180:CDS 40.0%
!! ATGTGGCCTTGTGCTATTAA+GGG + chr7_3:75298279-75298298 None:intergenic 40.0%
!! AATGTGGCCTTGTGCTATTA+AGG + chr7_3:75298280-75298299 None:intergenic 40.0%
! TTTGAAGCAAGGAAACTGCA+TGG + chr7_3:75298542-75298561 None:intergenic 40.0%
TGCAGTTTCCTTGCTTCAAA+AGG - chr7_3:75298542-75298561 Msa1124180:CDS 40.0%
GTTTCCTTGCTTCAAAAGGA+AGG - chr7_3:75298546-75298565 Msa1124180:CDS 40.0%
!!! TTCACCTTCCTTTTGAAGCA+AGG + chr7_3:75298553-75298572 None:intergenic 40.0%
GGGTGAAACAACAAAAACCA+TGG + chr7_3:75298683-75298702 None:intergenic 40.0%
TACCTTGAACATGCAATGGA+GGG + chr7_3:75298703-75298722 None:intergenic 40.0%
TGTGTACCTTGAACATGCAA+TGG + chr7_3:75298707-75298726 None:intergenic 40.0%
! TGAATTTTGTCAGGTATGCC+AGG + chr7_3:75298780-75298799 None:intergenic 40.0%
GTCACAAAAGAACAGATACC+AGG - chr7_3:75298801-75298820 Msa1124180:CDS 40.0%
! TTTTCCTCTTTCACTGTTCC+TGG + chr7_3:75298822-75298841 None:intergenic 40.0%
TCTTTGTTGCAAAGTGCAAC+AGG + chr7_3:75298984-75299003 None:intergenic 40.0%
GTTGCACTTTGCAACAAAGA+TGG - chr7_3:75298984-75299003 Msa1124180:CDS 40.0%
GGTTTAGATAAGGCTCAAAG+AGG - chr7_3:75299005-75299024 Msa1124180:CDS 40.0%
GAGGAAAGGAATAAAGGAAG+AGG - chr7_3:75299254-75299273 Msa1124180:CDS 40.0%
GAGGACTTATAATTAGAGGG+TGG - chr7_3:75299273-75299292 Msa1124180:CDS 40.0%
!! GGTGGATTTTTGACTCATTG+TGG - chr7_3:75299332-75299351 Msa1124180:CDS 40.0%
GGTTGGAATTCAACACTTGA+AGG - chr7_3:75299353-75299372 Msa1124180:CDS 40.0%
! ACACTTGAAGGGGTAAGTTT+TGG - chr7_3:75299365-75299384 Msa1124180:CDS 40.0%
GCAAAACTCTTAGCACAACG+TGG - chr7_3:75298318-75298337 Msa1124180:CDS 45.0%
!! CTTTCTCGTGCTGTTTCTTC+TGG - chr7_3:75298396-75298415 Msa1124180:CDS 45.0%
TCGAAATTCTCGCAACCATC+TGG + chr7_3:75298474-75298493 None:intergenic 45.0%
TGGTTGCGAGAATTTCGACA+TGG - chr7_3:75298476-75298495 Msa1124180:CDS 45.0%
GTACCTTGAACATGCAATGG+AGG + chr7_3:75298704-75298723 None:intergenic 45.0%
GATACCAGGAACAGTGAAAG+AGG - chr7_3:75298815-75298834 Msa1124180:CDS 45.0%
TTGAGGATTGGAGTGAGTCT+TGG - chr7_3:75299455-75299474 Msa1124180:CDS 45.0%
ATTTCCATTGAAGTGGGGAG+AGG - chr7_3:75299484-75299503 Msa1124180:CDS 45.0%
TGGGGAGAGGAAGAGAAATT+AGG - chr7_3:75299497-75299516 Msa1124180:CDS 45.0%
! AGAGAAAGGGCTAGTGAACT+TGG - chr7_3:75299599-75299618 Msa1124180:CDS 45.0%
GCAAAACTCTTAGCACAACG+TGG - chr7_3:75298318-75298337 Msa1124180:CDS 45.0%
!! CTTTCTCGTGCTGTTTCTTC+TGG - chr7_3:75298396-75298415 Msa1124180:CDS 45.0%
TCGAAATTCTCGCAACCATC+TGG + chr7_3:75298474-75298493 None:intergenic 45.0%
TGGTTGCGAGAATTTCGACA+TGG - chr7_3:75298476-75298495 Msa1124180:CDS 45.0%
GTACCTTGAACATGCAATGG+AGG + chr7_3:75298704-75298723 None:intergenic 45.0%
GATACCAGGAACAGTGAAAG+AGG - chr7_3:75298815-75298834 Msa1124180:CDS 45.0%
TTGAGGATTGGAGTGAGTCT+TGG - chr7_3:75299455-75299474 Msa1124180:CDS 45.0%
ATTTCCATTGAAGTGGGGAG+AGG - chr7_3:75299484-75299503 Msa1124180:CDS 45.0%
TGGGGAGAGGAAGAGAAATT+AGG - chr7_3:75299497-75299516 Msa1124180:CDS 45.0%
! AGAGAAAGGGCTAGTGAACT+TGG - chr7_3:75299599-75299618 Msa1124180:CDS 45.0%
CACCCTCCATTGCATGTTCA+AGG - chr7_3:75298698-75298717 Msa1124180:CDS 50.0%
TCTTCCTCTCCCCACTTCAA+TGG + chr7_3:75299491-75299510 None:intergenic 50.0%
CACCCTCCATTGCATGTTCA+AGG - chr7_3:75298698-75298717 Msa1124180:CDS 50.0%
TCTTCCTCTCCCCACTTCAA+TGG + chr7_3:75299491-75299510 None:intergenic 50.0%
TAGAGGGTGGGCCCCACAAA+TGG - chr7_3:75299286-75299305 Msa1124180:CDS 60.0%
TAGAGGGTGGGCCCCACAAA+TGG - chr7_3:75299286-75299305 Msa1124180:CDS 60.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 75298231 75299730 75298231 ID=Msa1124180;Name=Msa1124180
chr7_3 mRNA 75298231 75299730 75298231 ID=Msa1124180-mRNA-1;Parent=Msa1124180;Name=Msa1124180-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|-1|0|1|-1|1|1|0|499
chr7_3 exon 75298231 75299730 75298231 ID=Msa1124180-mRNA-1:exon:20268;Parent=Msa1124180-mRNA-1
chr7_3 CDS 75298231 75299730 75298231 ID=Msa1124180-mRNA-1:cds;Parent=Msa1124180-mRNA-1
Gene Sequence

>Msa1124180

ATGGTTTTGCAAGCAAACATTAATGCTCCACACTTTGTGTTATTTCCCTTAATAGCACAAGGCCACATTATCCCAATGATAGACATAGCAAAACTCTTAGCACAACGTGGTGTTATTGTTACCATATTCACTACACCAAAAAATGCATCACGTTTTACTTCAGTTCTTTCTCGTGCTGTTTCTTCTGGCCTTCAAATCAAACTTGTAACCCTAAATTTTCCATCAAAACAAGTTGGATTACCAGATGGTTGCGAGAATTTCGACATGGTTAACATTTCAAAAGACATGAATATGATGTACAATCTATTCCATGCAGTTTCCTTGCTTCAAAAGGAAGGTGAAGATTTGTTTGATAAATTGTCACCAAAACCAAGTTGCATTATCTCTGATTTTTGCATAACTTGGACTTCTCAAATAGCTGAAAAACATCACATTCCAAGGATTTCATTCCATGGTTTTTGTTGTTTCACCCTCCATTGCATGTTCAAGGTACACACTTCAAATATTCTTGAAAGCATCAATTCAGAAACAGAGTTTTTCTCTATTCCTGGCATACCTGACAAAATTCAAGTCACAAAAGAACAGATACCAGGAACAGTGAAAGAGGAAAAGATGAAGGGGTTTGCTGAGAAAATGCAAGAAGCTGAAATGAAATCATATGGTGTAATCATAAACAGTTTTGAGGAGTTAGAGAAAGAATATGTTAATGATTACAAAAAGGTAAGAAATGATAAGGTTTGGTGTGTTGGTCCTGTTGCACTTTGCAACAAAGATGGTTTAGATAAGGCTCAAAGAGGTAACATTGCTTCAATAAGTGAACATAATTGTTTAAAGTTTCTAGATTTGCATAAACCAAAATCTGTTGTTTATGTTTGTCTTGGAAGTTTATGCAATTTAATTCCTTCACAACTTATTGAATTGGCTTTGGGATTAGAAGCAACAAAAATTCCATTTATTTGGGTTATTAGGGAAGGAATTTATAAAAGTGAAGAGTTGGAAAAATGGATTAGTGATGAAAAGTTTGAGGAAAGGAATAAAGGAAGAGGACTTATAATTAGAGGGTGGGCCCCACAAATGGTGATATTATCACATTCTTCAATTGGTGGATTTTTGACTCATTGTGGTTGGAATTCAACACTTGAAGGGGTAAGTTTTGGTGTACCAATGATAACTTGGCCATTATTTGCTGACCAATTTTTGAATGAGAAACTTGTTACTCAAGTTTTGAGGATTGGAGTGAGTCTTGGAGTTGAATTTCCATTGAAGTGGGGAGAGGAAGAGAAATTAGGTGTAGTTGTGAAGAAGGAAGTTATTAAAGAGGCAATATGCAATGTGATGAATGAGGAAGATCAAGAGAGTAAAGAGAGAAGAGAAAGGGCTAGTGAACTTGGTGAGATTGCAAAAAAAGCTGTTGAAAAAGGTGGATCTTCTTATCTTAATATCACTTTGCTTATTCAAGATATCATGCAACAACAATCAAGCATCAAAGTTGAAACTTGA

Protein sequence

>Msa1124180

MVLQANINAPHFVLFPLIAQGHIIPMIDIAKLLAQRGVIVTIFTTPKNASRFTSVLSRAVSSGLQIKLVTLNFPSKQVGLPDGCENFDMVNISKDMNMMYNLFHAVSLLQKEGEDLFDKLSPKPSCIISDFCITWTSQIAEKHHIPRISFHGFCCFTLHCMFKVHTSNILESINSETEFFSIPGIPDKIQVTKEQIPGTVKEEKMKGFAEKMQEAEMKSYGVIINSFEELEKEYVNDYKKVRNDKVWCVGPVALCNKDGLDKAQRGNIASISEHNCLKFLDLHKPKSVVYVCLGSLCNLIPSQLIELALGLEATKIPFIWVIREGIYKSEELEKWISDEKFEERNKGRGLIIRGWAPQMVILSHSSIGGFLTHCGWNSTLEGVSFGVPMITWPLFADQFLNEKLVTQVLRIGVSLGVEFPLKWGEEEKLGVVVKKEVIKEAICNVMNEEDQESKERRERASELGEIAKKAVEKGGSSYLNITLLIQDIMQQQSSIKVET*