Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198770 | XP_013446173.1 | 98.824 | 510 | 6 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1028 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198770 | sp|Q9LPV5|NRT25_ARATH | 74.737 | 475 | 120 | 0 | 17 | 491 | 19 | 493 | 0.0 | 755 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198770 | A0A072U314 | 98.824 | 510 | 6 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1028 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa1198770 | 0.806075 | 9.811332e-50 | -8.615850e-47 |
| Msa0007990 | Msa1198770 | 0.830977 | 2.167379e-55 | -8.615850e-47 |
| Msa0038720 | Msa1198770 | 0.802375 | 5.779313e-49 | -8.615850e-47 |
| Msa0043980 | Msa1198770 | 0.822276 | 2.583174e-53 | -8.615850e-47 |
| Msa0044000 | Msa1198770 | 0.807588 | 4.696852e-50 | -8.615850e-47 |
| Msa0079070 | Msa1198770 | 0.827820 | 1.266726e-54 | -8.615850e-47 |
| Msa0095560 | Msa1198770 | 0.822708 | 2.049808e-53 | -8.615850e-47 |
| Msa0099210 | Msa1198770 | 0.810495 | 1.120344e-50 | -8.615850e-47 |
| Msa0100090 | Msa1198770 | 0.801158 | 1.027252e-48 | -8.615850e-47 |
| Msa0103250 | Msa1198770 | 0.803651 | 3.148182e-49 | -8.615850e-47 |
| Msa0105070 | Msa1198770 | 0.808903 | 2.463945e-50 | -8.615850e-47 |
| Msa0622170 | Msa1198770 | -0.815761 | 7.832011e-52 | -8.615850e-47 |
| Msa0627350 | Msa1198770 | 0.808561 | 2.915216e-50 | -8.615850e-47 |
| Msa0648860 | Msa1198770 | 0.816543 | 5.238264e-52 | -8.615850e-47 |
| Msa0661650 | Msa1198770 | 0.809297 | 2.028521e-50 | -8.615850e-47 |
| Msa0673460 | Msa1198770 | 0.811558 | 6.593360e-51 | -8.615850e-47 |
| Msa0688070 | Msa1198770 | 0.809469 | 1.863477e-50 | -8.615850e-47 |
| Msa0724210 | Msa1198770 | 0.804250 | 2.363941e-49 | -8.615850e-47 |
| Msa0751850 | Msa1198770 | 0.802364 | 5.810766e-49 | -8.615850e-47 |
| Msa0753720 | Msa1198770 | 0.813337 | 2.694055e-51 | -8.615850e-47 |
| Msa0760130 | Msa1198770 | 0.806322 | 8.703964e-50 | -8.615850e-47 |
| Msa0784480 | Msa1198770 | 0.803381 | 3.582156e-49 | -8.615850e-47 |
| Msa0786260 | Msa1198770 | 0.806318 | 8.717861e-50 | -8.615850e-47 |
| Msa0799370 | Msa1198770 | 0.808926 | 2.435649e-50 | -8.615850e-47 |
| Msa0820850 | Msa1198770 | 0.810243 | 1.269805e-50 | -8.615850e-47 |
| Msa0831850 | Msa1198770 | 0.800731 | 1.256167e-48 | -8.615850e-47 |
| Msa0127800 | Msa1198770 | 0.809792 | 1.587950e-50 | -8.615850e-47 |
| Msa0131770 | Msa1198770 | 0.818686 | 1.721826e-52 | -8.615850e-47 |
| Msa0138020 | Msa1198770 | 0.824740 | 6.852722e-54 | -8.615850e-47 |
| Msa0149300 | Msa1198770 | 0.833161 | 6.253328e-56 | -8.615850e-47 |
| Msa0172080 | Msa1198770 | 0.813478 | 2.508462e-51 | -8.615850e-47 |
| Msa0178510 | Msa1198770 | 0.800112 | 1.679242e-48 | -8.615850e-47 |
| Msa0187830 | Msa1198770 | 0.806248 | 9.021993e-50 | -8.615850e-47 |
| Msa0190530 | Msa1198770 | 0.824701 | 7.000118e-54 | -8.615850e-47 |
| Msa0200850 | Msa1198770 | 0.829243 | 5.740603e-55 | -8.615850e-47 |
| Msa0204840 | Msa1198770 | 0.804975 | 1.669032e-49 | -8.615850e-47 |
| Msa0218370 | Msa1198770 | 0.826269 | 2.976625e-54 | -8.615850e-47 |
| Msa0367870 | Msa1198770 | 0.807174 | 5.749760e-50 | -8.615850e-47 |
| Msa0389270 | Msa1198770 | 0.842119 | 3.140538e-58 | -8.615850e-47 |
| Msa0393620 | Msa1198770 | 0.831581 | 1.539244e-55 | -8.615850e-47 |
| Msa0409200 | Msa1198770 | 0.808938 | 2.421953e-50 | -8.615850e-47 |
| Msa0426900 | Msa1198770 | 0.805838 | 1.100227e-49 | -8.615850e-47 |
| Msa0428080 | Msa1198770 | 0.808031 | 3.781785e-50 | -8.615850e-47 |
| Msa0455760 | Msa1198770 | 0.829571 | 4.777047e-55 | -8.615850e-47 |
| Msa0999290 | Msa1198770 | 0.809801 | 1.581282e-50 | -8.615850e-47 |
| Msa1007230 | Msa1198770 | 0.813991 | 1.933725e-51 | -8.615850e-47 |
| Msa1014990 | Msa1198770 | 0.801113 | 1.049579e-48 | -8.615850e-47 |
| Msa1016320 | Msa1198770 | 0.817939 | 2.541712e-52 | -8.615850e-47 |
| Msa1039710 | Msa1198770 | -0.822109 | 2.824100e-53 | -8.615850e-47 |
| Msa1048270 | Msa1198770 | 0.819632 | 1.048618e-52 | -8.615850e-47 |
| Msa1054990 | Msa1198770 | 0.804060 | 2.589706e-49 | -8.615850e-47 |
| Msa1074530 | Msa1198770 | 0.807270 | 5.486010e-50 | -8.615850e-47 |
| Msa1075650 | Msa1198770 | 0.802093 | 6.605871e-49 | -8.615850e-47 |
| Msa1082500 | Msa1198770 | 0.818119 | 2.315261e-52 | -8.615850e-47 |
| Msa1100050 | Msa1198770 | 0.815724 | 7.985026e-52 | -8.615850e-47 |
| Msa0243480 | Msa1198770 | 0.837053 | 6.522057e-57 | -8.615850e-47 |
| Msa0244140 | Msa1198770 | 0.840047 | 1.099909e-57 | -8.615850e-47 |
| Msa0244190 | Msa1198770 | 0.829947 | 3.869535e-55 | -8.615850e-47 |
| Msa0252840 | Msa1198770 | 0.825516 | 4.492738e-54 | -8.615850e-47 |
| Msa0257320 | Msa1198770 | 0.804118 | 2.517983e-49 | -8.615850e-47 |
| Msa0264690 | Msa1198770 | 0.816061 | 6.716094e-52 | -8.615850e-47 |
| Msa0269810 | Msa1198770 | 0.819127 | 1.367222e-52 | -8.615850e-47 |
| Msa0276920 | Msa1198770 | 0.801200 | 1.007539e-48 | -8.615850e-47 |
| Msa0281930 | Msa1198770 | 0.816725 | 4.768804e-52 | -8.615850e-47 |
| Msa0319170 | Msa1198770 | 0.802338 | 5.882481e-49 | -8.615850e-47 |
| Msa0321080 | Msa1198770 | 0.846154 | 2.595830e-59 | -8.615850e-47 |
| Msa0340450 | Msa1198770 | 0.817336 | 3.476218e-52 | -8.615850e-47 |
| Msa0357830 | Msa1198770 | 0.809552 | 1.788759e-50 | -8.615850e-47 |
| Msa0357840 | Msa1198770 | 0.802810 | 4.700900e-49 | -8.615850e-47 |
| Msa0363790 | Msa1198770 | 0.837741 | 4.344958e-57 | -8.615850e-47 |
| Msa1122860 | Msa1198770 | 0.814208 | 1.731703e-51 | -8.615850e-47 |
| Msa1135470 | Msa1198770 | 0.812935 | 3.299971e-51 | -8.615850e-47 |
| Msa1162780 | Msa1198770 | 0.817090 | 3.949842e-52 | -8.615850e-47 |
| Msa1174040 | Msa1198770 | 0.803105 | 4.085523e-49 | -8.615850e-47 |
| Msa1177560 | Msa1198770 | 0.805886 | 1.075044e-49 | -8.615850e-47 |
| Msa1177780 | Msa1198770 | 0.800760 | 1.239196e-48 | -8.615850e-47 |
| Msa1185110 | Msa1198770 | 0.802556 | 5.305198e-49 | -8.615850e-47 |
| Msa1198770 | Msa1202660 | 0.808164 | 3.543702e-50 | -8.615850e-47 |
| Msa1198770 | Msa1224200 | 0.812374 | 4.378958e-51 | -8.615850e-47 |
| Msa1198770 | Msa1224480 | 0.811215 | 7.825486e-51 | -8.615850e-47 |
| Msa1198770 | Msa1246700 | 0.811334 | 7.373807e-51 | -8.615850e-47 |
| Msa1198770 | Msa1252260 | 0.915094 | 8.849361e-85 | -8.615850e-47 |
| Msa1198770 | Msa1255060 | 0.809145 | 2.186594e-50 | -8.615850e-47 |
| Msa1198770 | Msa1270660 | 0.817864 | 2.642772e-52 | -8.615850e-47 |
| Msa1198770 | Msa1270730 | 0.816889 | 4.382509e-52 | -8.615850e-47 |
| Msa1198770 | Msa1272680 | 0.808931 | 2.430600e-50 | -8.615850e-47 |
| Msa1198770 | Msa1292990 | 0.944169 | 3.189438e-103 | -8.615850e-47 |
| Msa1198770 | Msa1295330 | 0.819008 | 1.454933e-52 | -8.615850e-47 |
| Msa1198770 | Msa1295510 | 0.808792 | 2.601772e-50 | -8.615850e-47 |
| Msa1198770 | Msa1304890 | -0.823253 | 1.529674e-53 | -8.615850e-47 |
| Msa1198770 | Msa1305810 | 0.822989 | 1.763305e-53 | -8.615850e-47 |
| Msa1198770 | Msa1328520 | 0.811462 | 6.916447e-51 | -8.615850e-47 |
| Msa1198770 | Msa1335230 | 0.819593 | 1.070398e-52 | -8.615850e-47 |
| Msa1198770 | Msa1343250 | 0.807776 | 4.284016e-50 | -8.615850e-47 |
| Msa1198770 | Msa1344130 | 0.818201 | 2.217728e-52 | -8.615850e-47 |
| Msa1198770 | Msa1353470 | 0.804694 | 1.910104e-49 | -8.615850e-47 |
| Msa1198770 | Msa1355890 | 0.802722 | 4.901429e-49 | -8.615850e-47 |
| Msa1198770 | Msa1365270 | 0.803059 | 4.175551e-49 | -8.615850e-47 |
| Msa1198770 | Msa1374470 | 0.802564 | 5.284804e-49 | -8.615850e-47 |
| Msa1198770 | Msa1378040 | 0.830148 | 3.457899e-55 | -8.615850e-47 |
| Msa1198770 | Msa1378940 | 0.805141 | 1.540580e-49 | -8.615850e-47 |
| Msa1198770 | Msa1381530 | 0.835864 | 1.309151e-56 | -8.615850e-47 |
| Msa1198770 | Msa1384280 | 0.837976 | 3.782057e-57 | -8.615850e-47 |
| Msa1198770 | Msa1394310 | 0.806031 | 1.001988e-49 | -8.615850e-47 |
| Msa1198770 | Msa1394380 | 0.849349 | 3.422846e-60 | -8.615850e-47 |
| Msa1198770 | Msa1407600 | 0.814939 | 1.193278e-51 | -8.615850e-47 |
| Msa1198770 | Msa1408340 | 0.826466 | 2.672036e-54 | -8.615850e-47 |
| Msa1198770 | Msa1420270 | 0.804018 | 2.642217e-49 | -8.615850e-47 |
| Msa1198770 | Msa1423820 | 0.819805 | 9.574185e-53 | -8.615850e-47 |
| Msa1198770 | Msa1435270 | 0.811967 | 5.372654e-51 | -8.615850e-47 |
| Msa1198770 | Msa1454570 | 0.809881 | 1.519758e-50 | -8.615850e-47 |
| Msa1198770 | Msa1466540 | 0.831073 | 2.052177e-55 | -8.615850e-47 |
| Msa0486690 | Msa1198770 | 0.823199 | 1.575180e-53 | -8.615850e-47 |
| Msa0512750 | Msa1198770 | 0.807170 | 5.760713e-50 | -8.615850e-47 |
| Msa0518380 | Msa1198770 | 0.804883 | 1.744226e-49 | -8.615850e-47 |
| Msa0526070 | Msa1198770 | -0.826213 | 3.069177e-54 | -8.615850e-47 |
| Msa0530650 | Msa1198770 | 0.808962 | 2.393011e-50 | -8.615850e-47 |
| Msa0548920 | Msa1198770 | 0.813767 | 2.166347e-51 | -8.615850e-47 |
| Msa0587030 | Msa1198770 | 0.805791 | 1.125430e-49 | -8.615850e-47 |
| Msa0587190 | Msa1198770 | 0.800306 | 1.532896e-48 | -8.615850e-47 |
| Msa0842650 | Msa1198770 | 0.809439 | 1.891119e-50 | -8.615850e-47 |
| Msa0861130 | Msa1198770 | 0.810225 | 1.281091e-50 | -8.615850e-47 |
| Msa0862110 | Msa1198770 | 0.814434 | 1.543390e-51 | -8.615850e-47 |
| Msa0870830 | Msa1198770 | 0.811964 | 5.379958e-51 | -8.615850e-47 |
| Msa0894710 | Msa1198770 | 0.819651 | 1.038345e-52 | -8.615850e-47 |
| Msa0897330 | Msa1198770 | 0.803994 | 2.672504e-49 | -8.615850e-47 |
| Msa0902830 | Msa1198770 | 0.805684 | 1.185219e-49 | -8.615850e-47 |
| Msa0903990 | Msa1198770 | 0.807644 | 4.571026e-50 | -8.615850e-47 |
| Msa0915610 | Msa1198770 | 0.803143 | 4.011554e-49 | -8.615850e-47 |
| Msa0924310 | Msa1198770 | 0.805289 | 1.434399e-49 | -8.615850e-47 |
| Msa0926890 | Msa1198770 | 0.805751 | 1.147672e-49 | -8.615850e-47 |
| Msa0927310 | Msa1198770 | 0.815145 | 1.074191e-51 | -8.615850e-47 |
| Msa0927380 | Msa1198770 | 0.803464 | 3.443281e-49 | -8.615850e-47 |
| Msa0928130 | Msa1198770 | 0.800357 | 1.496872e-48 | -8.615850e-47 |
| Msa0933100 | Msa1198770 | 0.812189 | 4.804941e-51 | -8.615850e-47 |
| Msa0936390 | Msa1198770 | 0.837341 | 5.504064e-57 | -8.615850e-47 |
| Msa0960390 | Msa1198770 | 0.807722 | 4.399107e-50 | -8.615850e-47 |
| Msa0969520 | Msa1198770 | 0.845248 | 4.572505e-59 | -8.615850e-47 |
| Msa0973600 | Msa1198770 | 0.873092 | 1.921313e-67 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198770 | MtrunA17_Chr8g0368421 | 98.824 | 510 | 6 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1028 |
| Msa1198770 | MtrunA17_Chr4g0028551 | 61.585 | 492 | 186 | 2 | 18 | 509 | 38 | 526 | 0.0 | 646 |
| Msa1198770 | MtrunA17_Chr4g0028541 | 61.585 | 492 | 186 | 2 | 18 | 509 | 38 | 526 | 0.0 | 646 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198770 | AT1G12940.1 | 74.737 | 475 | 120 | 0 | 17 | 491 | 19 | 493 | 0.0 | 755 |
| Msa1198770 | AT5G60770.1 | 57.227 | 512 | 207 | 4 | 2 | 510 | 25 | 527 | 0.0 | 620 |
| Msa1198770 | AT1G08090.1 | 57.199 | 507 | 211 | 3 | 2 | 506 | 25 | 527 | 0.0 | 618 |
| Msa1198770 | AT1G08100.1 | 57.764 | 483 | 203 | 1 | 14 | 495 | 32 | 514 | 0.0 | 600 |
| Msa1198770 | AT3G45060.1 | 56.783 | 516 | 214 | 3 | 2 | 510 | 29 | 542 | 0.0 | 589 |
| Msa1198770 | AT5G60780.1 | 55.773 | 511 | 224 | 1 | 2 | 510 | 29 | 539 | 0.0 | 586 |
| Msa1198770 | AT5G14570.1 | 49.393 | 494 | 228 | 3 | 5 | 481 | 2 | 490 | 2.59e-170 | 490 |
Find 91 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGGTGTTGCATCTGTTTC+TGG | 0.074073 | 8_1:+50512867 | Msa1198770:CDS |
| AGCAGTTCCCATTGCAATTC+TGG | 0.180522 | 8_1:-50512901 | None:intergenic |
| TTCCAGCAGTGTGAAGTTTA+AGG | 0.193334 | 8_1:-50513966 | None:intergenic |
| GTAAATTTGTGTATCTTTAT+TGG | 0.193798 | 8_1:+50515731 | Msa1198770:three_prime_UTR |
| TGGTTTATTATCTGATTTAA+TGG | 0.218179 | 8_1:+50514038 | Msa1198770:CDS |
| CTTCTTGTGAGGTTCTTTAC+TGG | 0.225051 | 8_1:+50513023 | Msa1198770:CDS |
| TTGGAATGAGGGGTAGATTA+TGG | 0.258780 | 8_1:+50514070 | Msa1198770:CDS |
| GATTTAATGGCTAAGAGATT+TGG | 0.279825 | 8_1:+50514051 | Msa1198770:CDS |
| TTGACTTATGGTTATTGTTT+TGG | 0.287818 | 8_1:+50513889 | Msa1198770:CDS |
| GGAATCATTGCTGCAAGTTT+TGG | 0.302049 | 8_1:+50513985 | Msa1198770:CDS |
| CATGATTGTGTTTCTTTGAT+TGG | 0.307065 | 8_1:-50512601 | None:intergenic |
| GGTGGGTGGGGTAACCTTGG+TGG | 0.319262 | 8_1:+50513607 | Msa1198770:intron |
| GGAAAATATATTAAGAATAA+TGG | 0.321070 | 8_1:-50515464 | None:intergenic |
| TGTTGAGGTTGATTGGTTGA+TGG | 0.356794 | 8_1:-50512642 | None:intergenic |
| TTAAGGTTGTCACGGATTAT+AGG | 0.361381 | 8_1:-50512819 | None:intergenic |
| AGAAAGAGGAATAACTCTAA+TGG | 0.367970 | 8_1:+50515415 | Msa1198770:CDS |
| AATGGGAACTGCTTGTGATT+TGG | 0.383228 | 8_1:+50512911 | Msa1198770:CDS |
| AACCTTAAACTTCACACTGC+TGG | 0.383716 | 8_1:+50513964 | Msa1198770:CDS |
| TCTTTGATTGGATAGGGCTA+TGG | 0.386380 | 8_1:-50512589 | None:intergenic |
| TTGTTGTTGTTGAGGTTGAT+TGG | 0.391111 | 8_1:-50512649 | None:intergenic |
| ATCCTTTGAAGAAAATTAGT+TGG | 0.392329 | 8_1:-50515379 | None:intergenic |
| TATCCGTTGCTGTTAGGTTA+AGG | 0.394367 | 8_1:-50512836 | None:intergenic |
| AACCTAACAGCAACGGATAT+AGG | 0.398418 | 8_1:+50512840 | Msa1198770:CDS |
| AGGTCCTTAGGAGTCATATC+AGG | 0.406117 | 8_1:+50515317 | Msa1198770:intron |
| GAAAGAGGAATAACTCTAAT+GGG | 0.408051 | 8_1:+50515416 | Msa1198770:CDS |
| CATGGTGTGTTAAATTATAG+AGG | 0.409317 | 8_1:+50513853 | Msa1198770:CDS |
| GCTGCTTGTGGAATGACATT+TGG | 0.409888 | 8_1:+50514204 | Msa1198770:CDS |
| CTTTGATTGGATAGGGCTAT+GGG | 0.412462 | 8_1:-50512588 | None:intergenic |
| TATCATAGCTTAAAGAAATC+AGG | 0.412558 | 8_1:+50513793 | Msa1198770:CDS |
| TCTATTATCAATTCTCCTAC+TGG | 0.423158 | 8_1:+50512996 | Msa1198770:CDS |
| TTCCTATATCCGTTGCTGTT+AGG | 0.424382 | 8_1:-50512842 | None:intergenic |
| CACAGAAGAAGATTACTATA+TGG | 0.427355 | 8_1:+50515529 | Msa1198770:CDS |
| TCAGGTGGGTGGGGTAACCT+TGG | 0.436260 | 8_1:+50513604 | Msa1198770:intron |
| GGAAGAGCAAATGGTTTCTC+AGG | 0.441053 | 8_1:+50513113 | Msa1198770:CDS |
| TGCTAGCATTTCATCTATCA+TGG | 0.442197 | 8_1:+50512745 | Msa1198770:CDS |
| GGTTGATTGGTTGATGGTGT+TGG | 0.446485 | 8_1:-50512636 | None:intergenic |
| GGGTGGGGTAACCTTGGTGG+AGG | 0.446755 | 8_1:+50513610 | Msa1198770:CDS |
| TGCAACTATTTCAGGTCCTT+AGG | 0.448649 | 8_1:+50515305 | Msa1198770:intron |
| TGTGTTTCTTTGATTGGATA+GGG | 0.450993 | 8_1:-50512595 | None:intergenic |
| ACTGTTGTTGGAAGAGCAAA+TGG | 0.454937 | 8_1:+50513104 | Msa1198770:CDS |
| TCCTTTGAAGAAAATTAGTT+GGG | 0.459131 | 8_1:-50515378 | None:intergenic |
| GGCTAAGAGATTTGGAATGA+GGG | 0.467670 | 8_1:+50514059 | Msa1198770:CDS |
| AAGCTATGATAATTACCATC+TGG | 0.469954 | 8_1:-50513781 | None:intergenic |
| TGGATTTGTCAAACGTTGGC+TGG | 0.472815 | 8_1:+50514099 | Msa1198770:CDS |
| GGGGTAGATTATGGTGTTTG+TGG | 0.475044 | 8_1:+50514079 | Msa1198770:CDS |
| TGGCTAAGAGATTTGGAATG+AGG | 0.480994 | 8_1:+50514058 | Msa1198770:CDS |
| TTGTGTTTCTTTGATTGGAT+AGG | 0.482264 | 8_1:-50512596 | None:intergenic |
| ACATACCTTCTTGAGACAAA+AGG | 0.496721 | 8_1:-50514234 | None:intergenic |
| TTCAGCTATGATATTGTCAA+TGG | 0.501509 | 8_1:-50513923 | None:intergenic |
| GATAATAGTAGAAGTGAAAG+AGG | 0.507879 | 8_1:+50515611 | Msa1198770:CDS |
| AAGATTACTATATGGCTGAA+TGG | 0.518793 | 8_1:+50515537 | Msa1198770:CDS |
| AACTCAAAGGAGAGGGAGAA+AGG | 0.520853 | 8_1:+50515560 | Msa1198770:CDS |
| TAAGGTGCATATTATGATCA+TGG | 0.523894 | 8_1:-50515441 | None:intergenic |
| CATTCCTGATATGACTCCTA+AGG | 0.529469 | 8_1:-50515321 | None:intergenic |
| CATTTCAACTAGGCCTTCTG+AGG | 0.536507 | 8_1:+50515646 | Msa1198770:CDS |
| TCAGATAATAAACCACCTCC+TGG | 0.536893 | 8_1:-50514030 | None:intergenic |
| CTGTTAGGTTAAGGTTGTCA+CGG | 0.537447 | 8_1:-50512827 | None:intergenic |
| GGAGTCATATCAGGAATGAC+AGG | 0.542118 | 8_1:+50515326 | Msa1198770:CDS |
| GTGTGTTAAATTATAGAGGG+TGG | 0.543363 | 8_1:+50513857 | Msa1198770:CDS |
| TTTGGTCAAGATTTACCAGA+TGG | 0.543573 | 8_1:+50513766 | Msa1198770:CDS |
| TCAGGAATGACAGGAGGAGG+AGG | 0.547520 | 8_1:+50515335 | Msa1198770:CDS |
| CTGAATGGAACTCAAAGGAG+AGG | 0.547602 | 8_1:+50515552 | Msa1198770:CDS |
| GGAACTGCTTGTGATTTGGT+TGG | 0.550581 | 8_1:+50512915 | Msa1198770:CDS |
| GCAACGGATATAGGAAATGC+TGG | 0.559363 | 8_1:+50512849 | Msa1198770:CDS |
| ATATCAGGAATGACAGGAGG+AGG | 0.569761 | 8_1:+50515332 | Msa1198770:CDS |
| GAAAATTGAACATTTCAACT+AGG | 0.570170 | 8_1:+50515636 | Msa1198770:CDS |
| AAACTGAGTAGAAACAAAAG+TGG | 0.576179 | 8_1:-50513057 | None:intergenic |
| ATATATTAAGAATAATGGTA+AGG | 0.576979 | 8_1:-50515459 | None:intergenic |
| AGGGAGAAAGGCTCTCATCA+TGG | 0.577211 | 8_1:+50515572 | Msa1198770:CDS |
| GCTCAACAAAATTCACTGCA+TGG | 0.585027 | 8_1:+50513683 | Msa1198770:CDS |
| ATAGAAGTGAAGTAAACAGC+AGG | 0.585810 | 8_1:-50512978 | None:intergenic |
| CTCTATAATTTAACACACCA+TGG | 0.586174 | 8_1:-50513852 | None:intergenic |
| TTTGTGGATTTGTCAAACGT+TGG | 0.593191 | 8_1:+50514095 | Msa1198770:CDS |
| GCTAAGAGATTTGGAATGAG+GGG | 0.599275 | 8_1:+50514060 | Msa1198770:CDS |
| AATAGTAGAAGTGAAAGAGG+TGG | 0.601395 | 8_1:+50515614 | Msa1198770:CDS |
| ACAGGAGGAGGAGGAAACGT+TGG | 0.608583 | 8_1:+50515344 | Msa1198770:CDS |
| TGAATGGAACTCAAAGGAGA+GGG | 0.609630 | 8_1:+50515553 | Msa1198770:CDS |
| TATGGCTGAATGGAACTCAA+AGG | 0.622357 | 8_1:+50515547 | Msa1198770:CDS |
| TTGTTAGTTACATATTCACA+TGG | 0.624295 | 8_1:+50515775 | Msa1198770:three_prime_UTR |
| TGTATCAGTGAAAACACAAG+TGG | 0.625394 | 8_1:-50513652 | None:intergenic |
| ATCTCAAAAGTAATTTACCA+TGG | 0.629190 | 8_1:+50513835 | Msa1198770:CDS |
| ATGGTGTGTTAAATTATAGA+GGG | 0.629408 | 8_1:+50513854 | Msa1198770:CDS |
| TCACGGATTATAGGAACAAG+TGG | 0.646242 | 8_1:-50512810 | None:intergenic |
| GTCATATCAGGAATGACAGG+AGG | 0.646603 | 8_1:+50515329 | Msa1198770:CDS |
| CAACCTTAACCTAACAGCAA+CGG | 0.647550 | 8_1:+50512833 | Msa1198770:CDS |
| AGATGAAATGCTAGCATGTG+AGG | 0.648457 | 8_1:-50512738 | None:intergenic |
| GGTGGTGTAACATCCTCAGA+AGG | 0.651845 | 8_1:-50515659 | None:intergenic |
| GTTGTGTTGCTCCTCCACCA+AGG | 0.675542 | 8_1:-50513621 | None:intergenic |
| AAAGCAGCAGAAGCAAGACG+AGG | 0.678632 | 8_1:-50512939 | None:intergenic |
| ATTTGCTCTTCCAACAACAG+TGG | 0.700274 | 8_1:-50513102 | None:intergenic |
| CTCACAAGAAGAAAACCAGT+AGG | 0.723236 | 8_1:-50513011 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAACTTTTAACTTTTTTTA+AGG | + | chr8_1:50513214-50513233 | Msa1198770:intron | 10.0% |
| !! | AATTTCAATATGAATAAATT+TGG | - | chr8_1:50513325-50513344 | None:intergenic | 10.0% |
| !!! | AAATTTGTTCATATTAAAAT+TGG | - | chr8_1:50513418-50513437 | None:intergenic | 10.0% |
| !!! | CTTTTTTTAAGGTTTAAATA+TGG | + | chr8_1:50513225-50513244 | Msa1198770:intron | 15.0% |
| !!! | AATATGAACAAATTTTATCA+AGG | + | chr8_1:50513423-50513442 | Msa1198770:intron | 15.0% |
| !!! | GCATTTTCTATTTTAATATT+TGG | + | chr8_1:50513748-50513767 | Msa1198770:CDS | 15.0% |
| !! | TTAAAAGAATGAAAAATGAA+TGG | - | chr8_1:50514263-50514282 | None:intergenic | 15.0% |
| !! | ATATATTAAGAATAATGGTA+AGG | - | chr8_1:50515462-50515481 | None:intergenic | 15.0% |
| !! | GGAAAATATATTAAGAATAA+TGG | - | chr8_1:50515467-50515486 | None:intergenic | 15.0% |
| !! | CAATATGAATAAATTTGGTA+GGG | - | chr8_1:50513320-50513339 | None:intergenic | 20.0% |
| !! | TCAATATGAATAAATTTGGT+AGG | - | chr8_1:50513321-50513340 | None:intergenic | 20.0% |
| !!! | ATTGGTCTTTATAATATTCA+TGG | - | chr8_1:50513400-50513419 | None:intergenic | 20.0% |
| !! | TGGTTTATTATCTGATTTAA+TGG | + | chr8_1:50514038-50514057 | Msa1198770:CDS | 20.0% |
| !!! | TTATGAGTTTTATTGAATCT+GGG | - | chr8_1:50514374-50514393 | None:intergenic | 20.0% |
| !! | AATAAAACTCATAACACTTA+AGG | + | chr8_1:50514380-50514399 | Msa1198770:intron | 20.0% |
| !!! | TTTTATGGTATTGAATCTTT+TGG | + | chr8_1:50514475-50514494 | Msa1198770:intron | 20.0% |
| !!! | TGTGGTTCTTTTATTTATTA+AGG | - | chr8_1:50514956-50514975 | None:intergenic | 20.0% |
| !! | TAAAAGAACCACAAATTTAA+TGG | + | chr8_1:50514963-50514982 | Msa1198770:intron | 20.0% |
| !! | ATGATAGTTTCTAACAAATT+AGG | - | chr8_1:50514989-50515008 | None:intergenic | 20.0% |
| !! | AAAATCGTTCAAAATTGTTT+AGG | + | chr8_1:50515096-50515115 | Msa1198770:intron | 20.0% |
| !! | TCCTATTTATAAGAGAAATT+TGG | + | chr8_1:50515134-50515153 | Msa1198770:intron | 20.0% |
| !! | TCCAAATTTCTCTTATAAAT+AGG | - | chr8_1:50515138-50515157 | None:intergenic | 20.0% |
| !!! | CCTATTTAAAAGAGAAATTT+TGG | - | chr8_1:50515220-50515239 | None:intergenic | 20.0% |
| !!! | CCAAAATTTCTCTTTTAAAT+AGG | + | chr8_1:50515217-50515236 | Msa1198770:intron | 20.0% |
| !!! | TCTTAATATATTTTCCACAA+TGG | + | chr8_1:50515471-50515490 | Msa1198770:CDS | 20.0% |
| !!! | CTTAATATATTTTCCACAAT+GGG | + | chr8_1:50515472-50515491 | Msa1198770:CDS | 20.0% |
| !!! | TTAATATATTTTCCACAATG+GGG | + | chr8_1:50515473-50515492 | Msa1198770:CDS | 20.0% |
| !! | AAAAAAAATCAAACATGTTG+TGG | - | chr8_1:50515683-50515702 | None:intergenic | 20.0% |
| !! | GTAAATTTGTGTATCTTTAT+TGG | + | chr8_1:50515731-50515750 | Msa1198770:three_prime_UTR | 20.0% |
| !!! | TGATTTGTTTTCTGAATCTA+CGG | - | chr8_1:50512688-50512707 | None:intergenic | 25.0% |
| !!! | TATTGAGTGGATTTTGAATA+TGG | - | chr8_1:50512712-50512731 | None:intergenic | 25.0% |
| !! | TGCTTAAAAAATGTTTTCTC+AGG | + | chr8_1:50513586-50513605 | Msa1198770:intron | 25.0% |
| !! | TTAAAAAATGTTTTCTCAGG+TGG | + | chr8_1:50513589-50513608 | Msa1198770:intron | 25.0% |
| !! | TAAAAAATGTTTTCTCAGGT+GGG | + | chr8_1:50513590-50513609 | Msa1198770:intron | 25.0% |
| !! | TTTTCACTGATACAAGATTT+TGG | + | chr8_1:50513661-50513680 | Msa1198770:CDS | 25.0% |
| ! | TATCATAGCTTAAAGAAATC+AGG | + | chr8_1:50513793-50513812 | Msa1198770:CDS | 25.0% |
| ! | ATCTCAAAAGTAATTTACCA+TGG | + | chr8_1:50513835-50513854 | Msa1198770:CDS | 25.0% |
| ! | ATGGTGTGTTAAATTATAGA+GGG | + | chr8_1:50513854-50513873 | Msa1198770:CDS | 25.0% |
| !! | TTGACTTATGGTTATTGTTT+TGG | + | chr8_1:50513889-50513908 | Msa1198770:CDS | 25.0% |
| !!! | GTTATGAGTTTTATTGAATC+TGG | - | chr8_1:50514375-50514394 | None:intergenic | 25.0% |
| !!! | TGGTCTTATACAATTTTTTG+TGG | + | chr8_1:50514495-50514514 | Msa1198770:intron | 25.0% |
| ! | CAAAAAGTTGTGATATTGTT+TGG | + | chr8_1:50514560-50514579 | Msa1198770:intron | 25.0% |
| !!! | TTTGATTTGCTGAAAAATGA+AGG | - | chr8_1:50514695-50514714 | None:intergenic | 25.0% |
| ! | TAAACTAACTATTGATCGAA+TGG | - | chr8_1:50514830-50514849 | None:intergenic | 25.0% |
| !!! | GGTTCTTTTATTTATTAAGG+TGG | - | chr8_1:50514953-50514972 | None:intergenic | 25.0% |
| ! | AAATTAGGCCATTAAATTTG+TGG | - | chr8_1:50514974-50514993 | None:intergenic | 25.0% |
| ! | TGAAAGAAAAACTTGTAACA+CGG | + | chr8_1:50515071-50515090 | Msa1198770:intron | 25.0% |
| ! | ATTTCTCTTATAAATAGGAC+CGG | - | chr8_1:50515133-50515152 | None:intergenic | 25.0% |
| ! | TCAACAAAAGTGAATGTATT+TGG | + | chr8_1:50515158-50515177 | Msa1198770:intron | 25.0% |
| !! | ATTTCTCTTTTAAATAGGAC+CGG | + | chr8_1:50515222-50515241 | Msa1198770:intron | 25.0% |
| ! | TTAACATATGCAACTATTTC+AGG | + | chr8_1:50515297-50515316 | Msa1198770:intron | 25.0% |
| !! | TCCTTTGAAGAAAATTAGTT+GGG | - | chr8_1:50515381-50515400 | None:intergenic | 25.0% |
| !! | ATCCTTTGAAGAAAATTAGT+TGG | - | chr8_1:50515382-50515401 | None:intergenic | 25.0% |
| !! | TCAAGATTTTCAAAAGAAAG+AGG | + | chr8_1:50515401-50515420 | Msa1198770:CDS | 25.0% |
| ! | GAAAATTGAACATTTCAACT+AGG | + | chr8_1:50515636-50515655 | Msa1198770:CDS | 25.0% |
| ! | TTGTTAGTTACATATTCACA+TGG | + | chr8_1:50515775-50515794 | Msa1198770:three_prime_UTR | 25.0% |
| TGTGTTTCTTTGATTGGATA+GGG | - | chr8_1:50512598-50512617 | None:intergenic | 30.0% | |
| TTGTGTTTCTTTGATTGGAT+AGG | - | chr8_1:50512599-50512618 | None:intergenic | 30.0% | |
| CATGATTGTGTTTCTTTGAT+TGG | - | chr8_1:50512604-50512623 | None:intergenic | 30.0% | |
| !!! | GAGAATTTTTGTTGTTGTTG+AGG | - | chr8_1:50512660-50512679 | None:intergenic | 30.0% |
| !! | ATTTGTTTTCTGAATCTACG+GGG | - | chr8_1:50512686-50512705 | None:intergenic | 30.0% |
| !! | GATTTGTTTTCTGAATCTAC+GGG | - | chr8_1:50512687-50512706 | None:intergenic | 30.0% |
| TCTATTATCAATTCTCCTAC+TGG | + | chr8_1:50512996-50513015 | Msa1198770:CDS | 30.0% | |
| AAACTGAGTAGAAACAAAAG+TGG | - | chr8_1:50513060-50513079 | None:intergenic | 30.0% | |
| !!! | CTTTTGTTTCTACTCAGTTT+TGG | + | chr8_1:50513060-50513079 | Msa1198770:CDS | 30.0% |
| TCAAAGATTGCAAAAATGCT+GGG | - | chr8_1:50513726-50513745 | None:intergenic | 30.0% | |
| AAGCTATGATAATTACCATC+TGG | - | chr8_1:50513784-50513803 | None:intergenic | 30.0% | |
| CTCTATAATTTAACACACCA+TGG | - | chr8_1:50513855-50513874 | None:intergenic | 30.0% | |
| CATGGTGTGTTAAATTATAG+AGG | + | chr8_1:50513853-50513872 | Msa1198770:CDS | 30.0% | |
| !!! | TGGATTTTAGCTTTGACTTA+TGG | + | chr8_1:50513877-50513896 | Msa1198770:CDS | 30.0% |
| !!! | TTATGGTTATTGTTTTGGTG+TGG | + | chr8_1:50513894-50513913 | Msa1198770:CDS | 30.0% |
| TTCAGCTATGATATTGTCAA+TGG | - | chr8_1:50513926-50513945 | None:intergenic | 30.0% | |
| GATTTAATGGCTAAGAGATT+TGG | + | chr8_1:50514051-50514070 | Msa1198770:CDS | 30.0% | |
| !!! | TGGTGTTTTTTGTGTGATTT+TGG | + | chr8_1:50514119-50514138 | Msa1198770:CDS | 30.0% |
| !!! | GGTGTTTTTTGTGTGATTTT+GGG | + | chr8_1:50514120-50514139 | Msa1198770:CDS | 30.0% |
| AAATAGAACAGCACAACATA+AGG | + | chr8_1:50514432-50514451 | Msa1198770:intron | 30.0% | |
| ! | GAGTACGTGACAAATTTTTA+TGG | + | chr8_1:50514460-50514479 | Msa1198770:intron | 30.0% |
| ! | ATATCACAACTTTTTGTCAC+AGG | - | chr8_1:50514556-50514575 | None:intergenic | 30.0% |
| TGTAAAACTGTTTCAAAGAC+AGG | - | chr8_1:50514635-50514654 | None:intergenic | 30.0% | |
| TGAAAAATGAAGGATAGGAT+TGG | - | chr8_1:50514685-50514704 | None:intergenic | 30.0% | |
| TTTGCTGAAAAATGAAGGAT+AGG | - | chr8_1:50514690-50514709 | None:intergenic | 30.0% | |
| TCATTCTTATGAGACTTGAT+TGG | + | chr8_1:50515025-50515044 | Msa1198770:intron | 30.0% | |
| ! | ACCCAACTAATTTTCTTCAA+AGG | + | chr8_1:50515377-50515396 | Msa1198770:CDS | 30.0% |
| AGAAAGAGGAATAACTCTAA+TGG | + | chr8_1:50515415-50515434 | Msa1198770:CDS | 30.0% | |
| GAAAGAGGAATAACTCTAAT+GGG | + | chr8_1:50515416-50515435 | Msa1198770:CDS | 30.0% | |
| TAAGGTGCATATTATGATCA+TGG | - | chr8_1:50515444-50515463 | None:intergenic | 30.0% | |
| CACAGAAGAAGATTACTATA+TGG | + | chr8_1:50515529-50515548 | Msa1198770:CDS | 30.0% | |
| AAGATTACTATATGGCTGAA+TGG | + | chr8_1:50515537-50515556 | Msa1198770:CDS | 30.0% | |
| GATAATAGTAGAAGTGAAAG+AGG | + | chr8_1:50515611-50515630 | Msa1198770:CDS | 30.0% | |
| AAAAATCAAACATGTTGTGG+TGG | - | chr8_1:50515680-50515699 | None:intergenic | 30.0% | |
| !!! | GGGAGTTTTGATTTGTGTTA+AGG | - | chr8_1:50512571-50512590 | None:intergenic | 35.0% |
| ! | TTGTTGTTGTTGAGGTTGAT+TGG | - | chr8_1:50512652-50512671 | None:intergenic | 35.0% |
| TGCTAGCATTTCATCTATCA+TGG | + | chr8_1:50512745-50512764 | Msa1198770:CDS | 35.0% | |
| ! | TTAAGGTTGTCACGGATTAT+AGG | - | chr8_1:50512822-50512841 | None:intergenic | 35.0% |
| !! | TGTTTTTGCCAGAATTGCAA+TGG | + | chr8_1:50512893-50512912 | Msa1198770:CDS | 35.0% |
| ! | GTTTTTGCCAGAATTGCAAT+GGG | + | chr8_1:50512894-50512913 | Msa1198770:CDS | 35.0% |
| ATAGAAGTGAAGTAAACAGC+AGG | - | chr8_1:50512981-50513000 | None:intergenic | 35.0% | |
| ! | ATGTTTTCTACCACTGTTGT+TGG | + | chr8_1:50513092-50513111 | Msa1198770:CDS | 35.0% |
| TGTATCAGTGAAAACACAAG+TGG | - | chr8_1:50513655-50513674 | None:intergenic | 35.0% | |
| GTCAAAGATTGCAAAAATGC+TGG | - | chr8_1:50513727-50513746 | None:intergenic | 35.0% | |
| TTTGGTCAAGATTTACCAGA+TGG | + | chr8_1:50513766-50513785 | Msa1198770:CDS | 35.0% | |
| GTGTGTTAAATTATAGAGGG+TGG | + | chr8_1:50513857-50513876 | Msa1198770:CDS | 35.0% | |
| !!! | GCTAATGTTTTTTCTAGACC+AGG | + | chr8_1:50514012-50514031 | Msa1198770:CDS | 35.0% |
| !!! | AATGTTTTTTCTAGACCAGG+AGG | + | chr8_1:50514015-50514034 | Msa1198770:CDS | 35.0% |
| TTTGTGGATTTGTCAAACGT+TGG | + | chr8_1:50514095-50514114 | Msa1198770:CDS | 35.0% | |
| ! | TTGTTCCTTTTGTCTCAAGA+AGG | + | chr8_1:50514229-50514248 | Msa1198770:CDS | 35.0% |
| ACATACCTTCTTGAGACAAA+AGG | - | chr8_1:50514237-50514256 | None:intergenic | 35.0% | |
| AGTGCTCATTACATTGTCAA+TGG | + | chr8_1:50514905-50514924 | Msa1198770:intron | 35.0% | |
| ! | GGTGGTTAATCTCATTTTCA+AGG | - | chr8_1:50514935-50514954 | None:intergenic | 35.0% |
| TCATTTCTCAAAGACCAACT+AGG | - | chr8_1:50515054-50515073 | None:intergenic | 35.0% | |
| ATGTTATGTTATACTCCCTC+CGG | - | chr8_1:50515244-50515263 | None:intergenic | 35.0% | |
| ! | ATATATTTTCCACAATGGGG+TGG | + | chr8_1:50515476-50515495 | Msa1198770:CDS | 35.0% |
| ! | TCTGTGACTTTTGTAGATGA+TGG | - | chr8_1:50515515-50515534 | None:intergenic | 35.0% |
| AATAGTAGAAGTGAAAGAGG+TGG | + | chr8_1:50515614-50515633 | Msa1198770:CDS | 35.0% | |
| CTTTGATTGGATAGGGCTAT+GGG | - | chr8_1:50512591-50512610 | None:intergenic | 40.0% | |
| TCTTTGATTGGATAGGGCTA+TGG | - | chr8_1:50512592-50512611 | None:intergenic | 40.0% | |
| ! | TGTTGAGGTTGATTGGTTGA+TGG | - | chr8_1:50512645-50512664 | None:intergenic | 40.0% |
| !!! | TGTGAGGTTTTGCTATTGAG+TGG | - | chr8_1:50512725-50512744 | None:intergenic | 40.0% |
| AGATGAAATGCTAGCATGTG+AGG | - | chr8_1:50512741-50512760 | None:intergenic | 40.0% | |
| ! | TCACGGATTATAGGAACAAG+TGG | - | chr8_1:50512813-50512832 | None:intergenic | 40.0% |
| CTGTTAGGTTAAGGTTGTCA+CGG | - | chr8_1:50512830-50512849 | None:intergenic | 40.0% | |
| CAACCTTAACCTAACAGCAA+CGG | + | chr8_1:50512833-50512852 | Msa1198770:CDS | 40.0% | |
| ! | TATCCGTTGCTGTTAGGTTA+AGG | - | chr8_1:50512839-50512858 | None:intergenic | 40.0% |
| AACCTAACAGCAACGGATAT+AGG | + | chr8_1:50512840-50512859 | Msa1198770:CDS | 40.0% | |
| ! | TTCCTATATCCGTTGCTGTT+AGG | - | chr8_1:50512845-50512864 | None:intergenic | 40.0% |
| AATGGGAACTGCTTGTGATT+TGG | + | chr8_1:50512911-50512930 | Msa1198770:CDS | 40.0% | |
| CTCACAAGAAGAAAACCAGT+AGG | - | chr8_1:50513014-50513033 | None:intergenic | 40.0% | |
| !!! | CTACTGGTTTTCTTCTTGTG+AGG | + | chr8_1:50513012-50513031 | Msa1198770:CDS | 40.0% |
| CTTCTTGTGAGGTTCTTTAC+TGG | + | chr8_1:50513023-50513042 | Msa1198770:CDS | 40.0% | |
| ATTTGCTCTTCCAACAACAG+TGG | - | chr8_1:50513105-50513124 | None:intergenic | 40.0% | |
| ACTGTTGTTGGAAGAGCAAA+TGG | + | chr8_1:50513104-50513123 | Msa1198770:CDS | 40.0% | |
| ! | AAAATGTTTTCTCAGGTGGG+TGG | + | chr8_1:50513593-50513612 | Msa1198770:intron | 40.0% |
| ! | AAATGTTTTCTCAGGTGGGT+GGG | + | chr8_1:50513594-50513613 | Msa1198770:intron | 40.0% |
| GCTCAACAAAATTCACTGCA+TGG | + | chr8_1:50513683-50513702 | Msa1198770:CDS | 40.0% | |
| AACCTTAAACTTCACACTGC+TGG | + | chr8_1:50513964-50513983 | Msa1198770:CDS | 40.0% | |
| TTCCAGCAGTGTGAAGTTTA+AGG | - | chr8_1:50513969-50513988 | None:intergenic | 40.0% | |
| ! | GGAATCATTGCTGCAAGTTT+TGG | + | chr8_1:50513985-50514004 | Msa1198770:CDS | 40.0% |
| !!! | CATTGCTGCAAGTTTTGGTT+TGG | + | chr8_1:50513990-50514009 | Msa1198770:CDS | 40.0% |
| TCAGATAATAAACCACCTCC+TGG | - | chr8_1:50514033-50514052 | None:intergenic | 40.0% | |
| ! | TGGCTAAGAGATTTGGAATG+AGG | + | chr8_1:50514058-50514077 | Msa1198770:CDS | 40.0% |
| ! | GGCTAAGAGATTTGGAATGA+GGG | + | chr8_1:50514059-50514078 | Msa1198770:CDS | 40.0% |
| ! | GCTAAGAGATTTGGAATGAG+GGG | + | chr8_1:50514060-50514079 | Msa1198770:CDS | 40.0% |
| TTGGAATGAGGGGTAGATTA+TGG | + | chr8_1:50514070-50514089 | Msa1198770:CDS | 40.0% | |
| !!! | TGTGTGATTTTGGGACTTGT+TGG | + | chr8_1:50514129-50514148 | Msa1198770:CDS | 40.0% |
| ! | GTTTTTGTTCAAGCTGCTTG+TGG | + | chr8_1:50514192-50514211 | Msa1198770:CDS | 40.0% |
| !!! | TGGGTACGAATTTTGATTCG+AGG | - | chr8_1:50514355-50514374 | None:intergenic | 40.0% |
| ACAGGACAAACTGAAGACAA+GGG | - | chr8_1:50514617-50514636 | None:intergenic | 40.0% | |
| CTCTTATAAATAGGACCGGA+GGG | - | chr8_1:50515129-50515148 | None:intergenic | 40.0% | |
| TCTCTTATAAATAGGACCGG+AGG | - | chr8_1:50515130-50515149 | None:intergenic | 40.0% | |
| ! | TCTCTTTTAAATAGGACCGG+AGG | + | chr8_1:50515225-50515244 | Msa1198770:intron | 40.0% |
| ! | CTCTTTTAAATAGGACCGGA+GGG | + | chr8_1:50515226-50515245 | Msa1198770:intron | 40.0% |
| ! | TGCAACTATTTCAGGTCCTT+AGG | + | chr8_1:50515305-50515324 | Msa1198770:intron | 40.0% |
| CATTCCTGATATGACTCCTA+AGG | - | chr8_1:50515324-50515343 | None:intergenic | 40.0% | |
| TATGGCTGAATGGAACTCAA+AGG | + | chr8_1:50515547-50515566 | Msa1198770:CDS | 40.0% | |
| TGAATGGAACTCAAAGGAGA+GGG | + | chr8_1:50515553-50515572 | Msa1198770:CDS | 40.0% | |
| !! | GGTTGATTGGTTGATGGTGT+TGG | - | chr8_1:50512639-50512658 | None:intergenic | 45.0% |
| ! | GTTTTCTGAATCTACGGGGA+GGG | - | chr8_1:50512682-50512701 | None:intergenic | 45.0% |
| ! | TGTTTTCTGAATCTACGGGG+AGG | - | chr8_1:50512683-50512702 | None:intergenic | 45.0% |
| GCAACGGATATAGGAAATGC+TGG | + | chr8_1:50512849-50512868 | Msa1198770:CDS | 45.0% | |
| AGCAGTTCCCATTGCAATTC+TGG | - | chr8_1:50512904-50512923 | None:intergenic | 45.0% | |
| !! | GGAACTGCTTGTGATTTGGT+TGG | + | chr8_1:50512915-50512934 | Msa1198770:CDS | 45.0% |
| GGAAGAGCAAATGGTTTCTC+AGG | + | chr8_1:50513113-50513132 | Msa1198770:CDS | 45.0% | |
| ! | AATGTTTTCTCAGGTGGGTG+GGG | + | chr8_1:50513595-50513614 | Msa1198770:intron | 45.0% |
| !!! | GTTTTTTCTAGACCAGGAGG+TGG | + | chr8_1:50514018-50514037 | Msa1198770:CDS | 45.0% |
| GGGGTAGATTATGGTGTTTG+TGG | + | chr8_1:50514079-50514098 | Msa1198770:CDS | 45.0% | |
| TGGATTTGTCAAACGTTGGC+TGG | + | chr8_1:50514099-50514118 | Msa1198770:CDS | 45.0% | |
| GCTGCTTGTGGAATGACATT+TGG | + | chr8_1:50514204-50514223 | Msa1198770:CDS | 45.0% | |
| GACAGGACAAACTGAAGACA+AGG | - | chr8_1:50514618-50514637 | None:intergenic | 45.0% | |
| GACTTGATTGGAGACCTAGT+TGG | + | chr8_1:50515037-50515056 | Msa1198770:intron | 45.0% | |
| ! | TGTTTAGGATGTACTCCCTC+CGG | + | chr8_1:50515111-50515130 | Msa1198770:intron | 45.0% |
| AGGTCCTTAGGAGTCATATC+AGG | + | chr8_1:50515317-50515336 | Msa1198770:intron | 45.0% | |
| GGAGTCATATCAGGAATGAC+AGG | + | chr8_1:50515326-50515345 | Msa1198770:CDS | 45.0% | |
| GTCATATCAGGAATGACAGG+AGG | + | chr8_1:50515329-50515348 | Msa1198770:CDS | 45.0% | |
| ATATCAGGAATGACAGGAGG+AGG | + | chr8_1:50515332-50515351 | Msa1198770:CDS | 45.0% | |
| AAAAACATGCCACCCCATTG+TGG | - | chr8_1:50515488-50515507 | None:intergenic | 45.0% | |
| !!! | CAATGGGGTGGCATGTTTTT+TGG | + | chr8_1:50515488-50515507 | Msa1198770:CDS | 45.0% |
| CTGAATGGAACTCAAAGGAG+AGG | + | chr8_1:50515552-50515571 | Msa1198770:CDS | 45.0% | |
| AACTCAAAGGAGAGGGAGAA+AGG | + | chr8_1:50515560-50515579 | Msa1198770:CDS | 45.0% | |
| CATTTCAACTAGGCCTTCTG+AGG | + | chr8_1:50515646-50515665 | Msa1198770:CDS | 45.0% | |
| !! | GCTGGTGTTGCATCTGTTTC+TGG | + | chr8_1:50512867-50512886 | Msa1198770:CDS | 50.0% |
| AAAGCAGCAGAAGCAAGACG+AGG | - | chr8_1:50512942-50512961 | None:intergenic | 50.0% | |
| AGGGAGAAAGGCTCTCATCA+TGG | + | chr8_1:50515572-50515591 | Msa1198770:CDS | 50.0% | |
| GGTGGTGTAACATCCTCAGA+AGG | - | chr8_1:50515662-50515681 | None:intergenic | 50.0% | |
| ! | GTTGTGTTGCTCCTCCACCA+AGG | - | chr8_1:50513624-50513643 | None:intergenic | 55.0% |
| TCAGGAATGACAGGAGGAGG+AGG | + | chr8_1:50515335-50515354 | Msa1198770:CDS | 55.0% | |
| ACAGGAGGAGGAGGAAACGT+TGG | + | chr8_1:50515344-50515363 | Msa1198770:CDS | 55.0% | |
| TCAGGTGGGTGGGGTAACCT+TGG | + | chr8_1:50513604-50513623 | Msa1198770:intron | 60.0% | |
| GGTGGGTGGGGTAACCTTGG+TGG | + | chr8_1:50513607-50513626 | Msa1198770:intron | 65.0% | |
| GGGTGGGGTAACCTTGGTGG+AGG | + | chr8_1:50513610-50513629 | Msa1198770:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 50512549 | 50515922 | 50512549 | ID=Msa1198770;Name=Msa1198770 |
| chr8_1 | mRNA | 50512549 | 50515922 | 50512549 | ID=Msa1198770-mRNA-1;Parent=Msa1198770;Name=Msa1198770-mRNA-1;_AED=0.04;_eAED=0.04;_QI=72|1|1|1|1|1|3|228|510 |
| chr8_1 | exon | 50512549 | 50513134 | 50512549 | ID=Msa1198770-mRNA-1:exon:15860;Parent=Msa1198770-mRNA-1 |
| chr8_1 | exon | 50513608 | 50514250 | 50513608 | ID=Msa1198770-mRNA-1:exon:15861;Parent=Msa1198770-mRNA-1 |
| chr8_1 | exon | 50515319 | 50515922 | 50515319 | ID=Msa1198770-mRNA-1:exon:15862;Parent=Msa1198770-mRNA-1 |
| chr8_1 | five_prime_UTR | 50512549 | 50512620 | 50512549 | ID=Msa1198770-mRNA-1:five_prime_utr;Parent=Msa1198770-mRNA-1 |
| chr8_1 | CDS | 50512621 | 50513134 | 50512621 | ID=Msa1198770-mRNA-1:cds;Parent=Msa1198770-mRNA-1 |
| chr8_1 | CDS | 50513608 | 50514250 | 50513608 | ID=Msa1198770-mRNA-1:cds;Parent=Msa1198770-mRNA-1 |
| chr8_1 | CDS | 50515319 | 50515694 | 50515319 | ID=Msa1198770-mRNA-1:cds;Parent=Msa1198770-mRNA-1 |
| chr8_1 | three_prime_UTR | 50515695 | 50515922 | 50515695 | ID=Msa1198770-mRNA-1:three_prime_utr;Parent=Msa1198770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
