AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1217830


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1217830 MtrunA17_Chr4g0067371 90.283 566 52 2 1 565 1 564 0.0 992
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1217830 AT4G15820.1 31.862 521 274 16 49 560 10 458 4.53e-51 182

Find 157 sgRNAs with CRISPR-Local

Find 245 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGAAGTTCTAGGGATTATT+TGG 0.119169 8_1:+80376672 Msa1217830:three_prime_UTR
CTTTGTGCACTGTAAAATTT+TGG 0.151302 8_1:+80376723 Msa1217830:three_prime_UTR
TTCTCAATACCATCAATTTC+AGG 0.186057 8_1:-80374467 None:intergenic
TCAAAACGAAGGGGAGAATT+TGG 0.197015 8_1:+80374880 Msa1217830:CDS
CATCGTCATGTCACCAATTA+TGG 0.260048 8_1:-80376387 None:intergenic
GTCACCCAAATCTTCAAAAT+AGG 0.266261 8_1:-80375991 None:intergenic
AGATCAAAATGTGCCATAAT+TGG 0.271589 8_1:+80376374 Msa1217830:exon
TTACCATTGTTTATGCTCTT+AGG 0.271984 8_1:-80374950 None:intergenic
TATTGGAGAAGCAAGGTAAA+AGG 0.279713 8_1:+80374423 Msa1217830:CDS
AATTGAGGAAATTAAGTTAA+TGG 0.281372 8_1:+80374376 Msa1217830:CDS
TACGGTGGTATTTATTTGAT+TGG 0.283525 8_1:+80374206 Msa1217830:CDS
CATGATCTTATAGAAGTTCT+AGG 0.286352 8_1:+80376662 Msa1217830:three_prime_UTR
TGAACATTCCAATGGGGATT+TGG 0.289273 8_1:+80374274 Msa1217830:CDS
GTCCTCAATTCTCTTACTTC+AGG 0.297519 8_1:-80375308 None:intergenic
ACCGCCATTCCAACCAAAAT+TGG 0.306725 8_1:+80376416 Msa1217830:three_prime_UTR
GATAATGTGGACAGTATAAA+TGG 0.307121 8_1:+80375356 Msa1217830:CDS
AGAAGTTCTAGGGATTATTT+GGG 0.307284 8_1:+80376673 Msa1217830:three_prime_UTR
AGCTCGAAGAATTGAGTTAT+TGG 0.311553 8_1:+80374406 Msa1217830:CDS
AAATCCGTTGACGACGAGTC+TGG 0.325214 8_1:+80374851 Msa1217830:CDS
TACTGATCATGCAGGAATAT+TGG 0.330734 8_1:+80374754 Msa1217830:CDS
GATAGAATTGGTTGCGGTAT+TGG 0.338115 8_1:-80374011 None:intergenic
TCAGCAGCATTGCGATTAAA+TGG 0.340880 8_1:+80374548 Msa1217830:CDS
ACGGTGGTATTTATTTGATT+GGG 0.344851 8_1:+80374207 Msa1217830:CDS
CAAAATCTAGGACTGATATT+TGG 0.345469 8_1:+80375441 Msa1217830:CDS
GGTGTTCCATTGGAAGAAAA+AGG 0.350795 8_1:+80374827 Msa1217830:CDS
TAGTTTAAACTTCACCTCTA+AGG 0.365761 8_1:+80375887 Msa1217830:CDS
TTCAAACTGTTCGTTACCTT+TGG 0.370796 8_1:+80374240 Msa1217830:CDS
TACATGTTTAGGTGGTTTCC+CGG 0.371542 8_1:+80375262 Msa1217830:intron
ATTTAAAAGCCCTTCAACTA+AGG 0.372274 8_1:+80374649 Msa1217830:CDS
GACAGTATAAATGGCAGTTC+AGG 0.385031 8_1:+80375365 Msa1217830:CDS
AAATGATGGAAACACCAAAT+AGG 0.390911 8_1:+80374906 Msa1217830:CDS
AAAACACCAAAGGGATTTCC+AGG 0.391921 8_1:+80374677 Msa1217830:CDS
AAAGGGAAGAGGAAGAGAAT+GGG 0.392942 8_1:+80374441 Msa1217830:CDS
ACCTCAAGGTTATGGAAATC+AGG 0.394652 8_1:+80374730 Msa1217830:CDS
TTCCAGGGACTCAAGATCAT+AGG 0.395566 8_1:+80374693 Msa1217830:CDS
TGAGTCCCTGGAAATCCCTT+TGG 0.403399 8_1:-80374683 None:intergenic
AAACTTCACCTCTAAGGAAC+AGG 0.407016 8_1:+80375893 Msa1217830:CDS
TGTGTAAAACCTCAAGGTTA+TGG 0.419403 8_1:+80374722 Msa1217830:CDS
GTTTGTTGAAGCTGAAGAAT+AGG 0.422799 8_1:+80374504 Msa1217830:CDS
ATTGGAGAAGCAAGGTAAAA+GGG 0.426710 8_1:+80374424 Msa1217830:CDS
TCTCCGTGCATTTCGTCGGC+GGG 0.428642 8_1:-80374068 None:intergenic
TGGTGATATGAGTGTGAATC+CGG 0.433916 8_1:+80374592 Msa1217830:CDS
AAAAGGGAAGAGGAAGAGAA+TGG 0.434209 8_1:+80374440 Msa1217830:CDS
TTGTAGAAGAGTGGGAGAAA+TGG 0.435732 8_1:-80373985 None:intergenic
TCTTGAGGAGGAGATAGAAT+TGG 0.446271 8_1:-80374023 None:intergenic
AAGTTAAACAAGCAAAATCT+AGG 0.450684 8_1:+80375429 Msa1217830:CDS
CGAGAAATGAACATTCCAAT+GGG 0.450769 8_1:+80374267 Msa1217830:CDS
CACCACGAGACGAAAACCTT+TGG 0.453397 8_1:+80373881 Msa1217830:CDS
AAATGCTTCTGGTGTTCCAT+TGG 0.455535 8_1:+80374817 Msa1217830:CDS
AGTGGGAGAAATGGATAGAG+AGG 0.458320 8_1:-80373976 None:intergenic
AATCCGTTGACGACGAGTCT+GGG 0.460792 8_1:+80374852 Msa1217830:CDS
GGAGAATTTGGAAGAAATGA+TGG 0.461932 8_1:+80374892 Msa1217830:CDS
TAGTAGAAAACAAAAGTTGT+TGG 0.462900 8_1:-80375964 None:intergenic
AGTTGCAACATCTCCTATCA+AGG 0.464582 8_1:+80376611 Msa1217830:three_prime_UTR
AGACAGCTTCAACTTTATGC+TGG 0.464632 8_1:+80376303 Msa1217830:CDS
ATCCTCAAAAGCAACGGTAT+AGG 0.470890 8_1:-80375931 None:intergenic
GGTTTCCCGGAGACTAGTAT+TGG 0.470982 8_1:+80375275 Msa1217830:CDS
GATGGTATTGAGAAAGAGAT+TGG 0.471989 8_1:+80374476 Msa1217830:CDS
ATTTGGGGTAGGTAATATGT+AGG 0.474482 8_1:+80376689 Msa1217830:three_prime_UTR
GTTTCCCGGAGACTAGTATT+GGG 0.475666 8_1:+80375276 Msa1217830:CDS
ACCCTATGATCTTGAGTCCC+TGG 0.476198 8_1:-80374695 None:intergenic
GCGTGGACATGTCCCTTGAT+AGG 0.476564 8_1:-80376624 None:intergenic
AATACTAATTCCTCTTTCCC+CGG 0.481254 8_1:-80374611 None:intergenic
GATGAGACTGGCGAATTTGA+AGG 0.485316 8_1:+80374110 Msa1217830:CDS
TACTACTACTGACTGAACTT+TGG 0.485866 8_1:+80376534 Msa1217830:three_prime_UTR
ACCTTTGTGACCTTCCTCGT+TGG 0.491487 8_1:-80375859 None:intergenic
ACTGACTGAACTTTGGTGGC+AGG 0.492662 8_1:+80376541 Msa1217830:three_prime_UTR
TCCAGGGACTCAAGATCATA+GGG 0.496717 8_1:+80374694 Msa1217830:CDS
GACATCCCAATACTAGTCTC+CGG 0.497076 8_1:-80375281 None:intergenic
AAGCAGTCTTCACCTCTGTT+CGG 0.507774 8_1:-80376506 None:intergenic
ATGTCCACGCTGGTGTCATT+AGG 0.507907 8_1:+80376637 Msa1217830:three_prime_UTR
AATGGGGATCCTGAAATTGA+TGG 0.510509 8_1:+80374458 Msa1217830:CDS
GAGTGTGAATCCGGGGAAAG+AGG 0.511049 8_1:+80374601 Msa1217830:CDS
TTTGGGGTAGGTAATATGTA+GGG 0.513875 8_1:+80376690 Msa1217830:three_prime_UTR
CGGTGGTATTTATTTGATTG+GGG 0.515675 8_1:+80374208 Msa1217830:CDS
TGGAGGATCAATTAGTAGAA+AGG 0.517245 8_1:+80374351 Msa1217830:CDS
ATCTTCTCCGTGCATTTCGT+CGG 0.520605 8_1:-80374072 None:intergenic
TATTCTTACTTGTATTGACA+TGG 0.522256 8_1:-80376036 None:intergenic
GACAGCTTCAACTTTATGCT+GGG 0.524397 8_1:+80376304 Msa1217830:CDS
GATCATGCAGGAATATTGGA+TGG 0.526768 8_1:+80374758 Msa1217830:CDS
TTCTCCGTGCATTTCGTCGG+CGG 0.526838 8_1:-80374069 None:intergenic
ACTCACTTCCAAATCCCCAT+TGG 0.526917 8_1:-80374282 None:intergenic
ATTGAGTTATTGGAGAAGCA+AGG 0.528404 8_1:+80374416 Msa1217830:CDS
TACTACTGACTGAACTTTGG+TGG 0.529646 8_1:+80376537 Msa1217830:three_prime_UTR
AGAATTGGTTGCGGTATTGG+TGG 0.529811 8_1:-80374008 None:intergenic
TATTGACATGGGAACTGCAT+TGG 0.531084 8_1:-80376024 None:intergenic
GAAGCAAGGTAAAAGGGAAG+AGG 0.534912 8_1:+80374430 Msa1217830:CDS
GGGATTTGGAAGTGAGTGAA+AGG 0.535597 8_1:+80374288 Msa1217830:CDS
ATGATCTTATAGAAGTTCTA+GGG 0.536604 8_1:+80376663 Msa1217830:three_prime_UTR
TATTGGTGGTTGTAGAAGAG+TGG 0.541065 8_1:-80373994 None:intergenic
AATCTAGGACTGATATTTGG+TGG 0.542478 8_1:+80375444 Msa1217830:CDS
GCTGGAGCTGTTGATGAGAC+TGG 0.544574 8_1:+80374098 Msa1217830:CDS
AAGGGAAGAGGAAGAGAATG+GGG 0.545194 8_1:+80374442 Msa1217830:CDS
TTTCCCAGACTCGTCGTCAA+CGG 0.546358 8_1:-80374855 None:intergenic
GTTCATTTCTCGAATTCCAA+AGG 0.547806 8_1:-80374256 None:intergenic
GGAAATTAAGTTAATGGCGA+GGG 0.547864 8_1:+80374382 Msa1217830:CDS
ATTAGTAGAAAGGAAAATTG+AGG 0.550474 8_1:+80374361 Msa1217830:CDS
TCGAGAAATGAACATTCCAA+TGG 0.550786 8_1:+80374266 Msa1217830:CDS
AAGTGAGTGAAAGGGAAAAG+AGG 0.554130 8_1:+80374297 Msa1217830:CDS
ACATCCCAATACTAGTCTCC+GGG 0.554325 8_1:-80375280 None:intergenic
GTGGGAGAAATGGATAGAGA+GGG 0.555618 8_1:-80373975 None:intergenic
CCAAATAGGAAAACAAAGGA+TGG 0.556273 8_1:+80374920 Msa1217830:CDS
ATTGGTGGTTGTAGAAGAGT+GGG 0.556871 8_1:-80373993 None:intergenic
CGTGGAAATTCTGCTGGTGG+TGG 0.556967 8_1:+80374572 Msa1217830:CDS
ATCATGCAGGAATATTGGAT+GGG 0.560538 8_1:+80374759 Msa1217830:CDS
GTCTCGTGGTGAATGGCGCA+TGG 0.560887 8_1:-80373869 None:intergenic
AATGAAGAAATAATATCTCA+TGG 0.563546 8_1:+80376255 Msa1217830:CDS
GCATTGCGATTAAATGGTCG+TGG 0.566838 8_1:+80374554 Msa1217830:CDS
ATTCTTACTTGTATTGACAT+GGG 0.568941 8_1:-80376035 None:intergenic
GTTTCGTGTGTAAAACCTCA+AGG 0.574035 8_1:+80374716 Msa1217830:CDS
ACACAGAGTTCATGTTCTTG+AGG 0.576458 8_1:-80374038 None:intergenic
CTGGGAAAGTTCAAAACGAA+GGG 0.576479 8_1:+80374870 Msa1217830:CDS
GGAGGAGATAGAATTGGTTG+CGG 0.577051 8_1:-80374017 None:intergenic
ACCTGATTTCCATAACCTTG+AGG 0.579577 8_1:-80374731 None:intergenic
AAAACAAAAGTTGTTGGCAT+CGG 0.581793 8_1:-80375958 None:intergenic
AATCAGGTTACTGATCATGC+AGG 0.583737 8_1:+80374746 Msa1217830:CDS
TTCTAGGGATTATTTGGGGT+AGG 0.586381 8_1:+80376678 Msa1217830:three_prime_UTR
CAAAGAGGCTCCAACGAGGA+AGG 0.587696 8_1:+80375849 Msa1217830:CDS
AATGGTCGTGGAAATTCTGC+TGG 0.593329 8_1:+80374566 Msa1217830:CDS
AGGAAATTAAGTTAATGGCG+AGG 0.593697 8_1:+80374381 Msa1217830:CDS
ATTGAGGACACAAAACTCCC+AGG 0.597674 8_1:+80375322 Msa1217830:CDS
GCTACTAACTGATGTTGAGA+TGG 0.601272 8_1:+80376329 Msa1217830:CDS
TTTGAAGAGACTATAACCAA+AGG 0.604229 8_1:-80373897 None:intergenic
ATGCACGGAGAAGATATCGC+TGG 0.604763 8_1:+80374080 Msa1217830:CDS
CAGAGTTCATGTTCTTGAGG+AGG 0.605301 8_1:-80374035 None:intergenic
TTGAGGACACAAAACTCCCA+GGG 0.605879 8_1:+80375323 Msa1217830:CDS
GAATAGGATTAAGAGTAACA+AGG 0.605959 8_1:+80374520 Msa1217830:CDS
TGAAGGATTACGAGTGTCCG+TGG 0.607470 8_1:+80374127 Msa1217830:CDS
CTCCGTGCATTTCGTCGGCG+GGG 0.609299 8_1:-80374067 None:intergenic
GGTGATATGAGTGTGAATCC+GGG 0.618411 8_1:+80374593 Msa1217830:CDS
GGATTTGGAAGTGAGTGAAA+GGG 0.618662 8_1:+80374289 Msa1217830:CDS
CACCTGAAGTAAGAGAATTG+AGG 0.625819 8_1:+80375306 Msa1217830:CDS
ATAAATGGCAGTTCAGGACA+AGG 0.628328 8_1:+80375371 Msa1217830:CDS
TCATGCAGGAATATTGGATG+GGG 0.628651 8_1:+80374760 Msa1217830:CDS
TTGGGGTAGGTAATATGTAG+GGG 0.632584 8_1:+80376691 Msa1217830:three_prime_UTR
ATCAAGGGACATGTCCACGC+TGG 0.636595 8_1:+80376627 Msa1217830:three_prime_UTR
GGCCTGATCCTCAAAAGCAA+CGG 0.638889 8_1:-80375937 None:intergenic
GTTGCAACATCTCCTATCAA+GGG 0.638907 8_1:+80376612 Msa1217830:three_prime_UTR
ACATATAAACTTTCAGAACA+AGG 0.639006 8_1:-80376581 None:intergenic
ATCCCCGCCGACGAAATGCA+CGG 0.651813 8_1:+80374065 Msa1217830:CDS
AACACCAAATAGGAAAACAA+AGG 0.654980 8_1:+80374916 Msa1217830:CDS
TCTGGGAAAGTTCAAAACGA+AGG 0.655636 8_1:+80374869 Msa1217830:CDS
AAGGTTATTCTCATGCAAAG+AGG 0.664120 8_1:+80375834 Msa1217830:intron
TGGTGGGAATGGGAAAACTG+TGG 0.665787 8_1:+80374331 Msa1217830:CDS
TCCAACGAGGAAGGTCACAA+AGG 0.682997 8_1:+80375858 Msa1217830:CDS
AAACACCAAAGGGATTTCCA+GGG 0.684920 8_1:+80374678 Msa1217830:CDS
GACGCTGAACTTCCGAACAG+AGG 0.689376 8_1:+80376494 Msa1217830:three_prime_UTR
GGTCGTGGAAATTCTGCTGG+TGG 0.691888 8_1:+80374569 Msa1217830:CDS
GTGATATGAGTGTGAATCCG+GGG 0.699425 8_1:+80374594 Msa1217830:CDS
TGGGAAAGTTCAAAACGAAG+GGG 0.713239 8_1:+80374871 Msa1217830:CDS
TGGGAATGGGAAAACTGTGG+AGG 0.714382 8_1:+80374334 Msa1217830:CDS
GAGAAATGAACATTCCAATG+GGG 0.714996 8_1:+80374268 Msa1217830:CDS
ACACCTAAGAGCATAAACAA+TGG 0.716598 8_1:+80374947 Msa1217830:CDS
CACATACTAGAACATAACGT+AGG 0.719905 8_1:-80375472 None:intergenic
GAAGTTCTAGGGATTATTTG+GGG 0.724593 8_1:+80376674 Msa1217830:three_prime_UTR
TGTGCCTAATGACACCAGCG+TGG 0.731174 8_1:-80376641 None:intergenic
CATGCAAAGAGGCTCCAACG+AGG 0.752490 8_1:+80375845 Msa1217830:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTATATATTGGAATTA+TGG + chr8_1:80375105-80375124 Msa1217830:intron 10.0%
!! CTAATATCAAAATCAAAAAT+TGG + chr8_1:80376464-80376483 Msa1217830:three_prime_UTR 15.0%
!! AATTGAGGAAATTAAGTTAA+TGG + chr8_1:80374376-80374395 Msa1217830:CDS 20.0%
!!! AAATATTTTGAATTGCCTTT+TGG + chr8_1:80375041-80375060 Msa1217830:intron 20.0%
!!! ATATAATAATTTTCGAGCAA+CGG - chr8_1:80375095-80375114 None:intergenic 20.0%
!! GCTCGAAAATTATTATATAT+TGG + chr8_1:80375097-80375116 Msa1217830:intron 20.0%
!!! GAGTTATTTTTTACATGTTT+AGG + chr8_1:80375251-80375270 Msa1217830:intron 20.0%
!!! TTATTTTTTACATGTTTAGG+TGG + chr8_1:80375254-80375273 Msa1217830:intron 20.0%
!!! TGTGTAATTTTATTTGGTAT+AGG + chr8_1:80376191-80376210 Msa1217830:intron 20.0%
!! AATGAAGAAATAATATCTCA+TGG + chr8_1:80376255-80376274 Msa1217830:CDS 20.0%
! ATTAGTAGAAAGGAAAATTG+AGG + chr8_1:80374361-80374380 Msa1217830:CDS 25.0%
! AGCATACATAAAAAACCAAA+AGG - chr8_1:80375059-80375078 None:intergenic 25.0%
!!! TTTATGTATGCTGTTACTTT+TGG + chr8_1:80375067-80375086 Msa1217830:intron 25.0%
!!! AGATTTTGCTTGTTTAACTT+TGG - chr8_1:80375429-80375448 None:intergenic 25.0%
! AAGTTAAACAAGCAAAATCT+AGG + chr8_1:80375429-80375448 Msa1217830:CDS 25.0%
!! AAACAACGAAGTAGTATTTT+CGG - chr8_1:80375569-80375588 None:intergenic 25.0%
!! TTGACTTTGTTGAAGTTTTA+AGG - chr8_1:80375655-80375674 None:intergenic 25.0%
!!! AGATTTCTTTTGTTTGCATT+GGG + chr8_1:80375714-80375733 Msa1217830:intron 25.0%
! TAGTAGAAAACAAAAGTTGT+TGG - chr8_1:80375967-80375986 None:intergenic 25.0%
!!! AGAATCCTATTTTGAAGATT+TGG + chr8_1:80375986-80376005 Msa1217830:CDS 25.0%
!!! GAATCCTATTTTGAAGATTT+GGG + chr8_1:80375987-80376006 Msa1217830:CDS 25.0%
!! ATTCTTACTTGTATTGACAT+GGG - chr8_1:80376038-80376057 None:intergenic 25.0%
!! TATTCTTACTTGTATTGACA+TGG - chr8_1:80376039-80376058 None:intergenic 25.0%
! AATTTCAATTAACAAGTGCA+TGG - chr8_1:80376134-80376153 None:intergenic 25.0%
! AAATAAAATTACACACACAC+TGG - chr8_1:80376186-80376205 None:intergenic 25.0%
!! AGTGTGTGTGTAATTTTATT+TGG + chr8_1:80376185-80376204 Msa1217830:intron 25.0%
!! AAATATACTCCTTTTAGACA+TGG - chr8_1:80376217-80376236 None:intergenic 25.0%
! GAGTATATTTATTGCTTTGT+AGG + chr8_1:80376227-80376246 Msa1217830:intron 25.0%
! ACATATAAACTTTCAGAACA+AGG - chr8_1:80376584-80376603 None:intergenic 25.0%
! ATGATCTTATAGAAGTTCTA+GGG + chr8_1:80376663-80376682 Msa1217830:three_prime_UTR 25.0%
TTTGAAGAGACTATAACCAA+AGG - chr8_1:80373900-80373919 None:intergenic 30.0%
GTTATAGTCTCTTCAAAAAC+TGG + chr8_1:80373903-80373922 Msa1217830:CDS 30.0%
!!! GTTAGGGTTTTGAGAATTTT+CGG - chr8_1:80373951-80373970 None:intergenic 30.0%
!!! TTTTGGTAATGTTTCTGCTA+AGG + chr8_1:80374172-80374191 Msa1217830:CDS 30.0%
! GCTAAGGAGATTTTCAAATA+CGG + chr8_1:80374188-80374207 Msa1217830:CDS 30.0%
TACGGTGGTATTTATTTGAT+TGG + chr8_1:80374206-80374225 Msa1217830:CDS 30.0%
ACGGTGGTATTTATTTGATT+GGG + chr8_1:80374207-80374226 Msa1217830:CDS 30.0%
! GAAAAGAGGAACATTTTGTT+TGG + chr8_1:80374311-80374330 Msa1217830:CDS 30.0%
TTCTCAATACCATCAATTTC+AGG - chr8_1:80374470-80374489 None:intergenic 30.0%
GAATAGGATTAAGAGTAACA+AGG + chr8_1:80374520-80374539 Msa1217830:CDS 30.0%
ATTTAAAAGCCCTTCAACTA+AGG + chr8_1:80374649-80374668 Msa1217830:CDS 30.0%
!! TTTTTGTAGCCTTAGTTGAA+GGG - chr8_1:80374661-80374680 None:intergenic 30.0%
! GATTTTCCTTTTTCTTCCAA+TGG - chr8_1:80374836-80374855 None:intergenic 30.0%
! AAATGATGGAAACACCAAAT+AGG + chr8_1:80374906-80374925 Msa1217830:CDS 30.0%
AACACCAAATAGGAAAACAA+AGG + chr8_1:80374916-80374935 Msa1217830:CDS 30.0%
TTACCATTGTTTATGCTCTT+AGG - chr8_1:80374953-80374972 None:intergenic 30.0%
TCGTATCAGTTATTGTCAAT+TGG + chr8_1:80375006-80375025 Msa1217830:intron 30.0%
!! TCAACTGTCAACTTTTGTTT+TGG + chr8_1:80375155-80375174 Msa1217830:intron 30.0%
AAGAAGTAATTAGCGAAGAT+AGG + chr8_1:80375200-80375219 Msa1217830:intron 30.0%
! ATTATCCTTTTCAAAACCCT+GGG - chr8_1:80375342-80375361 None:intergenic 30.0%
GATAATGTGGACAGTATAAA+TGG + chr8_1:80375356-80375375 Msa1217830:CDS 30.0%
! CAAAATCTAGGACTGATATT+TGG + chr8_1:80375441-80375460 Msa1217830:CDS 30.0%
TGGATATGCTACTGAAAAAT+AGG - chr8_1:80375519-80375538 None:intergenic 30.0%
! AACAACGAAGTAGTATTTTC+GGG - chr8_1:80375568-80375587 None:intergenic 30.0%
! TTCACAAGGTTCTTTAAGAA+AGG - chr8_1:80375594-80375613 None:intergenic 30.0%
TACAGCTAGAAAATTTCACA+AGG - chr8_1:80375608-80375627 None:intergenic 30.0%
TCAACAAAGTCAAATATCCT+AGG + chr8_1:80375662-80375681 Msa1217830:intron 30.0%
!! GAGATTTCTTTTGTTTGCAT+TGG + chr8_1:80375713-80375732 Msa1217830:intron 30.0%
!! TTTTGTTTGCATTGGGTTTA+TGG + chr8_1:80375721-80375740 Msa1217830:intron 30.0%
TTTGTTTGCATTGGGTTTAT+GGG + chr8_1:80375722-80375741 Msa1217830:intron 30.0%
ATGGGAAATAGACATATGTT+TGG + chr8_1:80375740-80375759 Msa1217830:intron 30.0%
CACAAAGAGATATGATTTCA+TGG - chr8_1:80375814-80375833 None:intergenic 30.0%
GAAATCATATCTCTTTGTGA+AGG + chr8_1:80375815-80375834 Msa1217830:intron 30.0%
TAGTTTAAACTTCACCTCTA+AGG + chr8_1:80375887-80375906 Msa1217830:CDS 30.0%
AAAACAAAAGTTGTTGGCAT+CGG - chr8_1:80375961-80375980 None:intergenic 30.0%
AGATCAAAATGTGCCATAAT+TGG + chr8_1:80376374-80376393 Msa1217830:exon 30.0%
! TTTTCACTGTCTACCAATTT+TGG - chr8_1:80376432-80376451 None:intergenic 30.0%
CATGATCTTATAGAAGTTCT+AGG + chr8_1:80376662-80376681 Msa1217830:three_prime_UTR 30.0%
!! TAGAAGTTCTAGGGATTATT+TGG + chr8_1:80376672-80376691 Msa1217830:three_prime_UTR 30.0%
!! AGAAGTTCTAGGGATTATTT+GGG + chr8_1:80376673-80376692 Msa1217830:three_prime_UTR 30.0%
! CTTTGTGCACTGTAAAATTT+TGG + chr8_1:80376723-80376742 Msa1217830:three_prime_UTR 30.0%
TCTCTTCAAAAACTGGTCAA+AGG + chr8_1:80373910-80373929 Msa1217830:CDS 35.0%
!! ATTGTCTTTTGCTGTATCCA+CGG - chr8_1:80374147-80374166 None:intergenic 35.0%
! GCAAAAGACAATCGTGTTTT+TGG + chr8_1:80374155-80374174 Msa1217830:CDS 35.0%
! AAGGAGATTTTCAAATACGG+TGG + chr8_1:80374191-80374210 Msa1217830:CDS 35.0%
CGGTGGTATTTATTTGATTG+GGG + chr8_1:80374208-80374227 Msa1217830:CDS 35.0%
TTCAAACTGTTCGTTACCTT+TGG + chr8_1:80374240-80374259 Msa1217830:CDS 35.0%
GTTCATTTCTCGAATTCCAA+AGG - chr8_1:80374259-80374278 None:intergenic 35.0%
TCGAGAAATGAACATTCCAA+TGG + chr8_1:80374266-80374285 Msa1217830:CDS 35.0%
CGAGAAATGAACATTCCAAT+GGG + chr8_1:80374267-80374286 Msa1217830:CDS 35.0%
GAGAAATGAACATTCCAATG+GGG + chr8_1:80374268-80374287 Msa1217830:CDS 35.0%
!! AAGAGGAACATTTTGTTTGG+TGG + chr8_1:80374314-80374333 Msa1217830:CDS 35.0%
!! AGAGGAACATTTTGTTTGGT+GGG + chr8_1:80374315-80374334 Msa1217830:CDS 35.0%
!! AACATTTTGTTTGGTGGGAA+TGG + chr8_1:80374320-80374339 Msa1217830:CDS 35.0%
!! ACATTTTGTTTGGTGGGAAT+GGG + chr8_1:80374321-80374340 Msa1217830:CDS 35.0%
TGGAGGATCAATTAGTAGAA+AGG + chr8_1:80374351-80374370 Msa1217830:CDS 35.0%
AGGAAATTAAGTTAATGGCG+AGG + chr8_1:80374381-80374400 Msa1217830:CDS 35.0%
GGAAATTAAGTTAATGGCGA+GGG + chr8_1:80374382-80374401 Msa1217830:CDS 35.0%
AGCTCGAAGAATTGAGTTAT+TGG + chr8_1:80374406-80374425 Msa1217830:CDS 35.0%
ATTGAGTTATTGGAGAAGCA+AGG + chr8_1:80374416-80374435 Msa1217830:CDS 35.0%
TATTGGAGAAGCAAGGTAAA+AGG + chr8_1:80374423-80374442 Msa1217830:CDS 35.0%
ATTGGAGAAGCAAGGTAAAA+GGG + chr8_1:80374424-80374443 Msa1217830:CDS 35.0%
! GATGGTATTGAGAAAGAGAT+TGG + chr8_1:80374476-80374495 Msa1217830:CDS 35.0%
! GTTTGTTGAAGCTGAAGAAT+AGG + chr8_1:80374504-80374523 Msa1217830:CDS 35.0%
AATACTAATTCCTCTTTCCC+CGG - chr8_1:80374614-80374633 None:intergenic 35.0%
!! GTTTTTGTAGCCTTAGTTGA+AGG - chr8_1:80374662-80374681 None:intergenic 35.0%
TAAGGCTACAAAAACACCAA+AGG + chr8_1:80374667-80374686 Msa1217830:CDS 35.0%
AAGGCTACAAAAACACCAAA+GGG + chr8_1:80374668-80374687 Msa1217830:CDS 35.0%
TGTGTAAAACCTCAAGGTTA+TGG + chr8_1:80374722-80374741 Msa1217830:CDS 35.0%
TACTGATCATGCAGGAATAT+TGG + chr8_1:80374754-80374773 Msa1217830:CDS 35.0%
ATCATGCAGGAATATTGGAT+GGG + chr8_1:80374759-80374778 Msa1217830:CDS 35.0%
!!! AACACCAGAAGCATTTTTGT+GGG - chr8_1:80374813-80374832 None:intergenic 35.0%
GGAGAATTTGGAAGAAATGA+TGG + chr8_1:80374892-80374911 Msa1217830:CDS 35.0%
!!! CCATCCTTTGTTTTCCTATT+TGG - chr8_1:80374923-80374942 None:intergenic 35.0%
CCAAATAGGAAAACAAAGGA+TGG + chr8_1:80374920-80374939 Msa1217830:CDS 35.0%
! ACACCTAAGAGCATAAACAA+TGG + chr8_1:80374947-80374966 Msa1217830:CDS 35.0%
!!! ACTGTCAACTTTTGTTTTGG+TGG + chr8_1:80375158-80375177 Msa1217830:intron 35.0%
! CATTATCCTTTTCAAAACCC+TGG - chr8_1:80375343-80375362 None:intergenic 35.0%
!!! GGGTTTTGAAAAGGATAATG+TGG + chr8_1:80375343-80375362 Msa1217830:CDS 35.0%
! AATCTAGGACTGATATTTGG+TGG + chr8_1:80375444-80375463 Msa1217830:CDS 35.0%
CACATACTAGAACATAACGT+AGG - chr8_1:80375475-80375494 None:intergenic 35.0%
TTTCAGTAGCATATCCATAC+AGG + chr8_1:80375522-80375541 Msa1217830:intron 35.0%
TTCAGTAGCATATCCATACA+GGG + chr8_1:80375523-80375542 Msa1217830:intron 35.0%
GGAAATAGACATATGTTTGG+CGG + chr8_1:80375743-80375762 Msa1217830:intron 35.0%
AGAGATATGATTTCATGGTC+AGG - chr8_1:80375809-80375828 None:intergenic 35.0%
AAGGTTATTCTCATGCAAAG+AGG + chr8_1:80375834-80375853 Msa1217830:intron 35.0%
! ATTTTGTTCCTGTTCCTTAG+AGG - chr8_1:80375904-80375923 None:intergenic 35.0%
GTCACCCAAATCTTCAAAAT+AGG - chr8_1:80375994-80376013 None:intergenic 35.0%
!!! TCTACCAATTTTGGTTGGAA+TGG - chr8_1:80376423-80376442 None:intergenic 35.0%
! TACTACTACTGACTGAACTT+TGG + chr8_1:80376534-80376553 Msa1217830:three_prime_UTR 35.0%
!! GAAGTTCTAGGGATTATTTG+GGG + chr8_1:80376674-80376693 Msa1217830:three_prime_UTR 35.0%
! ATTTGGGGTAGGTAATATGT+AGG + chr8_1:80376689-80376708 Msa1217830:three_prime_UTR 35.0%
! TTTGGGGTAGGTAATATGTA+GGG + chr8_1:80376690-80376709 Msa1217830:three_prime_UTR 35.0%
!!! GGATAGAGAGGGTTTTGTTA+GGG - chr8_1:80373967-80373986 None:intergenic 40.0%
!!! TGGATAGAGAGGGTTTTGTT+AGG - chr8_1:80373968-80373987 None:intergenic 40.0%
TTGTAGAAGAGTGGGAGAAA+TGG - chr8_1:80373988-80374007 None:intergenic 40.0%
! ATTGGTGGTTGTAGAAGAGT+GGG - chr8_1:80373996-80374015 None:intergenic 40.0%
! TATTGGTGGTTGTAGAAGAG+TGG - chr8_1:80373997-80374016 None:intergenic 40.0%
GATAGAATTGGTTGCGGTAT+TGG - chr8_1:80374014-80374033 None:intergenic 40.0%
TCTTGAGGAGGAGATAGAAT+TGG - chr8_1:80374026-80374045 None:intergenic 40.0%
ACACAGAGTTCATGTTCTTG+AGG - chr8_1:80374041-80374060 None:intergenic 40.0%
TGAACATTCCAATGGGGATT+TGG + chr8_1:80374274-80374293 Msa1217830:CDS 40.0%
GGATTTGGAAGTGAGTGAAA+GGG + chr8_1:80374289-80374308 Msa1217830:CDS 40.0%
AAGTGAGTGAAAGGGAAAAG+AGG + chr8_1:80374297-80374316 Msa1217830:CDS 40.0%
AAAAGGGAAGAGGAAGAGAA+TGG + chr8_1:80374440-80374459 Msa1217830:CDS 40.0%
AAAGGGAAGAGGAAGAGAAT+GGG + chr8_1:80374441-80374460 Msa1217830:CDS 40.0%
AATGGGGATCCTGAAATTGA+TGG + chr8_1:80374458-80374477 Msa1217830:CDS 40.0%
TCAGCAGCATTGCGATTAAA+TGG + chr8_1:80374548-80374567 Msa1217830:CDS 40.0%
TGGTGATATGAGTGTGAATC+CGG + chr8_1:80374592-80374611 Msa1217830:CDS 40.0%
AAAACACCAAAGGGATTTCC+AGG + chr8_1:80374677-80374696 Msa1217830:CDS 40.0%
AAACACCAAAGGGATTTCCA+GGG + chr8_1:80374678-80374697 Msa1217830:CDS 40.0%
GTTTCGTGTGTAAAACCTCA+AGG + chr8_1:80374716-80374735 Msa1217830:CDS 40.0%
ACCTCAAGGTTATGGAAATC+AGG + chr8_1:80374730-80374749 Msa1217830:CDS 40.0%
ACCTGATTTCCATAACCTTG+AGG - chr8_1:80374734-80374753 None:intergenic 40.0%
AATCAGGTTACTGATCATGC+AGG + chr8_1:80374746-80374765 Msa1217830:CDS 40.0%
GATCATGCAGGAATATTGGA+TGG + chr8_1:80374758-80374777 Msa1217830:CDS 40.0%
TCATGCAGGAATATTGGATG+GGG + chr8_1:80374760-80374779 Msa1217830:CDS 40.0%
!!! GAACACCAGAAGCATTTTTG+TGG - chr8_1:80374814-80374833 None:intergenic 40.0%
AAATGCTTCTGGTGTTCCAT+TGG + chr8_1:80374817-80374836 Msa1217830:CDS 40.0%
GGTGTTCCATTGGAAGAAAA+AGG + chr8_1:80374827-80374846 Msa1217830:CDS 40.0%
TCTGGGAAAGTTCAAAACGA+AGG + chr8_1:80374869-80374888 Msa1217830:CDS 40.0%
CTGGGAAAGTTCAAAACGAA+GGG + chr8_1:80374870-80374889 Msa1217830:CDS 40.0%
TGGGAAAGTTCAAAACGAAG+GGG + chr8_1:80374871-80374890 Msa1217830:CDS 40.0%
TCAAAACGAAGGGGAGAATT+TGG + chr8_1:80374880-80374899 Msa1217830:CDS 40.0%
TACTTCTTGTAGCAAACACG+TGG - chr8_1:80375188-80375207 None:intergenic 40.0%
! TTAGCGAAGATAGGTTTGCT+TGG + chr8_1:80375209-80375228 Msa1217830:intron 40.0%
! TAGCGAAGATAGGTTTGCTT+GGG + chr8_1:80375210-80375229 Msa1217830:intron 40.0%
TACATGTTTAGGTGGTTTCC+CGG + chr8_1:80375262-80375281 Msa1217830:intron 40.0%
CACCTGAAGTAAGAGAATTG+AGG + chr8_1:80375306-80375325 Msa1217830:CDS 40.0%
GTCCTCAATTCTCTTACTTC+AGG - chr8_1:80375311-80375330 None:intergenic 40.0%
!!! AAACTCCCAGGGTTTTGAAA+AGG + chr8_1:80375334-80375353 Msa1217830:CDS 40.0%
GACAGTATAAATGGCAGTTC+AGG + chr8_1:80375365-80375384 Msa1217830:CDS 40.0%
ATAAATGGCAGTTCAGGACA+AGG + chr8_1:80375371-80375390 Msa1217830:CDS 40.0%
TATCCATACAGGGACTTCTT+AGG + chr8_1:80375533-80375552 Msa1217830:intron 40.0%
ATACCTAAGAAGTCCCTGTA+TGG - chr8_1:80375539-80375558 None:intergenic 40.0%
AGTCAAATATCCTAGGTCGT+AGG + chr8_1:80375669-80375688 Msa1217830:intron 40.0%
AAGAAAAGATCCTACGACCT+AGG - chr8_1:80375682-80375701 None:intergenic 40.0%
GGAGCAAATGGATACATGTA+GGG - chr8_1:80375788-80375807 None:intergenic 40.0%
AGGAGCAAATGGATACATGT+AGG - chr8_1:80375789-80375808 None:intergenic 40.0%
ATTTCATGGTCAGGAGCAAA+TGG - chr8_1:80375800-80375819 None:intergenic 40.0%
! AAACTTCACCTCTAAGGAAC+AGG + chr8_1:80375893-80375912 Msa1217830:CDS 40.0%
!!! TTCCTATACCGTTGCTTTTG+AGG + chr8_1:80375929-80375948 Msa1217830:CDS 40.0%
ATCCTCAAAAGCAACGGTAT+AGG - chr8_1:80375934-80375953 None:intergenic 40.0%
TATTGACATGGGAACTGCAT+TGG - chr8_1:80376027-80376046 None:intergenic 40.0%
TGGTATAGGCCATGTCTAAA+AGG + chr8_1:80376205-80376224 Msa1217830:intron 40.0%
AGACAGCTTCAACTTTATGC+TGG + chr8_1:80376303-80376322 Msa1217830:CDS 40.0%
GACAGCTTCAACTTTATGCT+GGG + chr8_1:80376304-80376323 Msa1217830:CDS 40.0%
GCTACTAACTGATGTTGAGA+TGG + chr8_1:80376329-80376348 Msa1217830:CDS 40.0%
CATCGTCATGTCACCAATTA+TGG - chr8_1:80376390-80376409 None:intergenic 40.0%
!!! ACCAATTTTGGTTGGAATGG+CGG - chr8_1:80376420-80376439 None:intergenic 40.0%
!! CACTGTCTACCAATTTTGGT+TGG - chr8_1:80376428-80376447 None:intergenic 40.0%
! TACTACTGACTGAACTTTGG+TGG + chr8_1:80376537-80376556 Msa1217830:three_prime_UTR 40.0%
AGTTGCAACATCTCCTATCA+AGG + chr8_1:80376611-80376630 Msa1217830:three_prime_UTR 40.0%
GTTGCAACATCTCCTATCAA+GGG + chr8_1:80376612-80376631 Msa1217830:three_prime_UTR 40.0%
! TTCTAGGGATTATTTGGGGT+AGG + chr8_1:80376678-80376697 Msa1217830:three_prime_UTR 40.0%
TTGGGGTAGGTAATATGTAG+GGG + chr8_1:80376691-80376710 Msa1217830:three_prime_UTR 40.0%
! AACCAAAGGTTTTCGTCTCG+TGG - chr8_1:80373886-80373905 None:intergenic 45.0%
GTGGGAGAAATGGATAGAGA+GGG - chr8_1:80373978-80373997 None:intergenic 45.0%
AGTGGGAGAAATGGATAGAG+AGG - chr8_1:80373979-80373998 None:intergenic 45.0%
! AGAATTGGTTGCGGTATTGG+TGG - chr8_1:80374011-80374030 None:intergenic 45.0%
GGAGGAGATAGAATTGGTTG+CGG - chr8_1:80374020-80374039 None:intergenic 45.0%
CAGAGTTCATGTTCTTGAGG+AGG - chr8_1:80374038-80374057 None:intergenic 45.0%
ATCTTCTCCGTGCATTTCGT+CGG - chr8_1:80374075-80374094 None:intergenic 45.0%
GATGAGACTGGCGAATTTGA+AGG + chr8_1:80374110-80374129 Msa1217830:CDS 45.0%
ACTCACTTCCAAATCCCCAT+TGG - chr8_1:80374285-80374304 None:intergenic 45.0%
GGGATTTGGAAGTGAGTGAA+AGG + chr8_1:80374288-80374307 Msa1217830:CDS 45.0%
GAAGCAAGGTAAAAGGGAAG+AGG + chr8_1:80374430-80374449 Msa1217830:CDS 45.0%
AAGGGAAGAGGAAGAGAATG+GGG + chr8_1:80374442-80374461 Msa1217830:CDS 45.0%
GCATTGCGATTAAATGGTCG+TGG + chr8_1:80374554-80374573 Msa1217830:CDS 45.0%
AATGGTCGTGGAAATTCTGC+TGG + chr8_1:80374566-80374585 Msa1217830:CDS 45.0%
GGTGATATGAGTGTGAATCC+GGG + chr8_1:80374593-80374612 Msa1217830:CDS 45.0%
GTGATATGAGTGTGAATCCG+GGG + chr8_1:80374594-80374613 Msa1217830:CDS 45.0%
TTCCAGGGACTCAAGATCAT+AGG + chr8_1:80374693-80374712 Msa1217830:CDS 45.0%
TCCAGGGACTCAAGATCATA+GGG + chr8_1:80374694-80374713 Msa1217830:CDS 45.0%
GTCACCCACAAAAATGCTTC+TGG + chr8_1:80374806-80374825 Msa1217830:CDS 45.0%
GTTTCCCGGAGACTAGTATT+GGG + chr8_1:80375276-80375295 Msa1217830:CDS 45.0%
! ACATCCCAATACTAGTCTCC+GGG - chr8_1:80375283-80375302 None:intergenic 45.0%
! GACATCCCAATACTAGTCTC+CGG - chr8_1:80375284-80375303 None:intergenic 45.0%
ATTGAGGACACAAAACTCCC+AGG + chr8_1:80375322-80375341 Msa1217830:CDS 45.0%
TTGAGGACACAAAACTCCCA+GGG + chr8_1:80375323-80375342 Msa1217830:CDS 45.0%
!!! TACCGTTGCTTTTGAGGATC+AGG + chr8_1:80375935-80375954 Msa1217830:CDS 45.0%
ACCGCCATTCCAACCAAAAT+TGG + chr8_1:80376416-80376435 Msa1217830:three_prime_UTR 45.0%
AAGCAGTCTTCACCTCTGTT+CGG - chr8_1:80376509-80376528 None:intergenic 45.0%
! GGTTTTCGTCTCGTGGTGAA+TGG - chr8_1:80373879-80373898 None:intergenic 50.0%
CACCACGAGACGAAAACCTT+TGG + chr8_1:80373881-80373900 Msa1217830:CDS 50.0%
ATGCACGGAGAAGATATCGC+TGG + chr8_1:80374080-80374099 Msa1217830:CDS 50.0%
TGAAGGATTACGAGTGTCCG+TGG + chr8_1:80374127-80374146 Msa1217830:CDS 50.0%
TGGTGGGAATGGGAAAACTG+TGG + chr8_1:80374331-80374350 Msa1217830:CDS 50.0%
TGGGAATGGGAAAACTGTGG+AGG + chr8_1:80374334-80374353 Msa1217830:CDS 50.0%
TGAGTCCCTGGAAATCCCTT+TGG - chr8_1:80374686-80374705 None:intergenic 50.0%
ACCCTATGATCTTGAGTCCC+TGG - chr8_1:80374698-80374717 None:intergenic 50.0%
AAATCCGTTGACGACGAGTC+TGG + chr8_1:80374851-80374870 Msa1217830:CDS 50.0%
AATCCGTTGACGACGAGTCT+GGG + chr8_1:80374852-80374871 Msa1217830:CDS 50.0%
TTTCCCAGACTCGTCGTCAA+CGG - chr8_1:80374858-80374877 None:intergenic 50.0%
GGTTTCCCGGAGACTAGTAT+TGG + chr8_1:80375275-80375294 Msa1217830:CDS 50.0%
TCCAACGAGGAAGGTCACAA+AGG + chr8_1:80375858-80375877 Msa1217830:CDS 50.0%
ACCTTTGTGACCTTCCTCGT+TGG - chr8_1:80375862-80375881 None:intergenic 50.0%
GGCCTGATCCTCAAAAGCAA+CGG - chr8_1:80375940-80375959 None:intergenic 50.0%
! ACTGACTGAACTTTGGTGGC+AGG + chr8_1:80376541-80376560 Msa1217830:three_prime_UTR 50.0%
!! ATGTCCACGCTGGTGTCATT+AGG + chr8_1:80376637-80376656 Msa1217830:three_prime_UTR 50.0%
TTCTCCGTGCATTTCGTCGG+CGG - chr8_1:80374072-80374091 None:intergenic 55.0%
! GCTGGAGCTGTTGATGAGAC+TGG + chr8_1:80374098-80374117 Msa1217830:CDS 55.0%
GGTCGTGGAAATTCTGCTGG+TGG + chr8_1:80374569-80374588 Msa1217830:CDS 55.0%
CGTGGAAATTCTGCTGGTGG+TGG + chr8_1:80374572-80374591 Msa1217830:CDS 55.0%
GAGTGTGAATCCGGGGAAAG+AGG + chr8_1:80374601-80374620 Msa1217830:CDS 55.0%
CATGCAAAGAGGCTCCAACG+AGG + chr8_1:80375845-80375864 Msa1217830:CDS 55.0%
CAAAGAGGCTCCAACGAGGA+AGG + chr8_1:80375849-80375868 Msa1217830:CDS 55.0%
GACGCTGAACTTCCGAACAG+AGG + chr8_1:80376494-80376513 Msa1217830:three_prime_UTR 55.0%
GCGTGGACATGTCCCTTGAT+AGG - chr8_1:80376627-80376646 None:intergenic 55.0%
ATCAAGGGACATGTCCACGC+TGG + chr8_1:80376627-80376646 Msa1217830:three_prime_UTR 55.0%
TGTGCCTAATGACACCAGCG+TGG - chr8_1:80376644-80376663 None:intergenic 55.0%
GTCTCGTGGTGAATGGCGCA+TGG - chr8_1:80373872-80373891 None:intergenic 60.0%
ATCCCCGCCGACGAAATGCA+CGG + chr8_1:80374065-80374084 Msa1217830:CDS 60.0%
TCTCCGTGCATTTCGTCGGC+GGG - chr8_1:80374071-80374090 None:intergenic 60.0%
CTCCGTGCATTTCGTCGGCG+GGG - chr8_1:80374070-80374089 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 80373843 80376833 80373843 ID=Msa1217830;Name=Msa1217830
chr8_1 mRNA 80373843 80376833 80373843 ID=Msa1217830-mRNA-1;Parent=Msa1217830;Name=Msa1217830-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|1|0.75|1|1|1|4|441|565
chr8_1 exon 80373843 80374968 80373843 ID=Msa1217830-mRNA-1:exon:28119;Parent=Msa1217830-mRNA-1
chr8_1 exon 80375273 80375487 80375273 ID=Msa1217830-mRNA-1:exon:28120;Parent=Msa1217830-mRNA-1
chr8_1 exon 80375837 80376049 80375837 ID=Msa1217830-mRNA-1:exon:28121;Parent=Msa1217830-mRNA-1
chr8_1 exon 80376249 80376833 80376249 ID=Msa1217830-mRNA-1:exon:28122;Parent=Msa1217830-mRNA-1
chr8_1 CDS 80373843 80374968 80373843 ID=Msa1217830-mRNA-1:cds;Parent=Msa1217830-mRNA-1
chr8_1 CDS 80375273 80375487 80375273 ID=Msa1217830-mRNA-1:cds;Parent=Msa1217830-mRNA-1
chr8_1 CDS 80375837 80376049 80375837 ID=Msa1217830-mRNA-1:cds;Parent=Msa1217830-mRNA-1
chr8_1 CDS 80376249 80376392 80376249 ID=Msa1217830-mRNA-1:cds;Parent=Msa1217830-mRNA-1
chr8_1 three_prime_UTR 80376393 80376833 80376393 ID=Msa1217830-mRNA-1:three_prime_utr;Parent=Msa1217830-mRNA-1
Gene Sequence

>Msa1217830

ATGGCGATTGCGCATTGCTTCTTCTTCCATGCGCCATTCACCACGAGACGAAAACCTTTGGTTATAGTCTCTTCAAAAACTGGTCAAAGGAAAAACTATCTGCGACCGAAAATTCTCAAAACCCTAACAAAACCCTCTCTATCCATTTCTCCCACTCTTCTACAACCACCAATACCGCAACCAATTCTATCTCCTCCTCAAGAACATGAACTCTGTGTTGATATCCCCGCCGACGAAATGCACGGAGAAGATATCGCTGGAGCTGTTGATGAGACTGGCGAATTTGAAGGATTACGAGTGTCCGTGGATACAGCAAAAGACAATCGTGTTTTTGGTAATGTTTCTGCTAAGGAGATTTTCAAATACGGTGGTATTTATTTGATTGGGGCTTTTGTGTTTCAAACTGTTCGTTACCTTTGGAATTCGAGAAATGAACATTCCAATGGGGATTTGGAAGTGAGTGAAAGGGAAAAGAGGAACATTTTGTTTGGTGGGAATGGGAAAACTGTGGAGGATCAATTAGTAGAAAGGAAAATTGAGGAAATTAAGTTAATGGCGAGGGAAGCTCGAAGAATTGAGTTATTGGAGAAGCAAGGTAAAAGGGAAGAGGAAGAGAATGGGGATCCTGAAATTGATGGTATTGAGAAAGAGATTGGTGAACGTTTGTTGAAGCTGAAGAATAGGATTAAGAGTAACAAGGATAGTTCAGCAGCATTGCGATTAAATGGTCGTGGAAATTCTGCTGGTGGTGGTGATATGAGTGTGAATCCGGGGAAAGAGGAATTAGTATTTAAGAAAAAGTCTAAATTTAAAAGCCCTTCAACTAAGGCTACAAAAACACCAAAGGGATTTCCAGGGACTCAAGATCATAGGGTTTCGTGTGTAAAACCTCAAGGTTATGGAAATCAGGTTACTGATCATGCAGGAATATTGGATGGGGATAAGCAAGTGAATCAACAAGATGTCACCCACAAAAATGCTTCTGGTGTTCCATTGGAAGAAAAAGGAAAATCCGTTGACGACGAGTCTGGGAAAGTTCAAAACGAAGGGGAGAATTTGGAAGAAATGATGGAAACACCAAATAGGAAAACAAAGGATGGAGTTACACCTAAGAGCATAAACAATGGTGGTTTCCCGGAGACTAGTATTGGGATGTCTTCACCTGAAGTAAGAGAATTGAGGACACAAAACTCCCAGGGTTTTGAAAAGGATAATGTGGACAGTATAAATGGCAGTTCAGGACAAGGATTAGCTAAAAAAAAATCAGCAGCTAACAAAGCCAAAGTTAAACAAGCAAAATCTAGGACTGATATTTGGTGGCTGAACCTACGTTATGTTCTAGTTATTCTCATGCAAAGAGGCTCCAACGAGGAAGGTCACAAAGGTCTCTATAGTTTAAACTTCACCTCTAAGGAACAGGAACAAAATGATGATTCCTATACCGTTGCTTTTGAGGATCAGGCCGATGCCAACAACTTTTGTTTTCTACTAGAATCCTATTTTGAAGATTTGGGTGACAATTTTAGTGCCAATGCAGTTCCCATGTCAATACAAGAATTGAATGAAGAAATAATATCTCATGGCGAGAAAGTAGTAGTTGTTAAAAAGAGACAGCTTCAACTTTATGCTGGGCAGCTACTAACTGATGTTGAGATGGCGTTGTGCTCTATAATAGAACAAGATCAAAATGTGCCATAA

Protein sequence

>Msa1217830

MAIAHCFFFHAPFTTRRKPLVIVSSKTGQRKNYLRPKILKTLTKPSLSISPTLLQPPIPQPILSPPQEHELCVDIPADEMHGEDIAGAVDETGEFEGLRVSVDTAKDNRVFGNVSAKEIFKYGGIYLIGAFVFQTVRYLWNSRNEHSNGDLEVSEREKRNILFGGNGKTVEDQLVERKIEEIKLMAREARRIELLEKQGKREEEENGDPEIDGIEKEIGERLLKLKNRIKSNKDSSAALRLNGRGNSAGGGDMSVNPGKEELVFKKKSKFKSPSTKATKTPKGFPGTQDHRVSCVKPQGYGNQVTDHAGILDGDKQVNQQDVTHKNASGVPLEEKGKSVDDESGKVQNEGENLEEMMETPNRKTKDGVTPKSINNGGFPETSIGMSSPEVRELRTQNSQGFEKDNVDSINGSSGQGLAKKKSAANKAKVKQAKSRTDIWWLNLRYVLVILMQRGSNEEGHKGLYSLNFTSKEQEQNDDSYTVAFEDQADANNFCFLLESYFEDLGDNFSANAVPMSIQELNEEIISHGEKVVVVKKRQLQLYAGQLLTDVEMALCSIIEQDQNVP*