Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174010 | AES65076.2 | 97.807 | 228 | 4 | 1 | 1 | 228 | 1 | 227 | 1.60e-161 | 455 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174010 | sp|Q9FJ17|DI197_ARATH | 47.863 | 234 | 93 | 8 | 1 | 228 | 1 | 211 | 2.90e-54 | 176 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174010 | G7IMY1 | 97.807 | 228 | 4 | 1 | 1 | 228 | 1 | 227 | 7.64e-162 | 455 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa1174010 | 0.815817 | 7.609881e-52 | -8.615850e-47 |
| Msa0004360 | Msa1174010 | 0.809507 | 1.828962e-50 | -8.615850e-47 |
| Msa0021810 | Msa1174010 | 0.801238 | 9.894634e-49 | -8.615850e-47 |
| Msa0024680 | Msa1174010 | 0.825905 | 3.632391e-54 | -8.615850e-47 |
| Msa0027540 | Msa1174010 | 0.828428 | 9.040372e-55 | -8.615850e-47 |
| Msa0030310 | Msa1174010 | 0.802274 | 6.063586e-49 | -8.615850e-47 |
| Msa0030380 | Msa1174010 | 0.828392 | 9.221370e-55 | -8.615850e-47 |
| Msa0032840 | Msa1174010 | -0.842145 | 3.092396e-58 | -8.615850e-47 |
| Msa0044710 | Msa1174010 | 0.823096 | 1.664756e-53 | -8.615850e-47 |
| Msa0049400 | Msa1174010 | -0.808413 | 3.135851e-50 | -8.615850e-47 |
| Msa0049650 | Msa1174010 | -0.819304 | 1.245713e-52 | -8.615850e-47 |
| Msa0050430 | Msa1174010 | 0.816240 | 6.125184e-52 | -8.615850e-47 |
| Msa0072810 | Msa1174010 | 0.831580 | 1.539885e-55 | -8.615850e-47 |
| Msa0075310 | Msa1174010 | 0.822870 | 1.879480e-53 | -8.615850e-47 |
| Msa0095380 | Msa1174010 | 0.827872 | 1.230605e-54 | -8.615850e-47 |
| Msa0103000 | Msa1174010 | 0.829289 | 5.596336e-55 | -8.615850e-47 |
| Msa0105420 | Msa1174010 | 0.814333 | 1.624817e-51 | -8.615850e-47 |
| Msa0114540 | Msa1174010 | -0.809307 | 2.018781e-50 | -8.615850e-47 |
| Msa0120330 | Msa1174010 | 0.826969 | 2.025807e-54 | -8.615850e-47 |
| Msa0605620 | Msa1174010 | 0.800291 | 1.543817e-48 | -8.615850e-47 |
| Msa0607200 | Msa1174010 | 0.825993 | 3.462177e-54 | -8.615850e-47 |
| Msa0618010 | Msa1174010 | 0.839641 | 1.403582e-57 | -8.615850e-47 |
| Msa0620810 | Msa1174010 | 0.817895 | 2.601072e-52 | -8.615850e-47 |
| Msa0621120 | Msa1174010 | 0.809516 | 1.820643e-50 | -8.615850e-47 |
| Msa0625530 | Msa1174010 | -0.834826 | 2.394259e-56 | -8.615850e-47 |
| Msa0638280 | Msa1174010 | 0.809306 | 2.019978e-50 | -8.615850e-47 |
| Msa0638320 | Msa1174010 | 0.809502 | 1.833632e-50 | -8.615850e-47 |
| Msa0642650 | Msa1174010 | 0.841211 | 5.451334e-58 | -8.615850e-47 |
| Msa0647380 | Msa1174010 | 0.814331 | 1.627145e-51 | -8.615850e-47 |
| Msa0657050 | Msa1174010 | 0.805755 | 1.145409e-49 | -8.615850e-47 |
| Msa0667220 | Msa1174010 | 0.817388 | 3.383610e-52 | -8.615850e-47 |
| Msa0669220 | Msa1174010 | 0.800030 | 1.745021e-48 | -8.615850e-47 |
| Msa0669850 | Msa1174010 | 0.857472 | 1.594300e-62 | -8.615850e-47 |
| Msa0677270 | Msa1174010 | 0.819245 | 1.284913e-52 | -8.615850e-47 |
| Msa0677290 | Msa1174010 | 0.803560 | 3.288795e-49 | -8.615850e-47 |
| Msa0678860 | Msa1174010 | 0.826506 | 2.613193e-54 | -8.615850e-47 |
| Msa0681890 | Msa1174010 | 0.811418 | 7.072147e-51 | -8.615850e-47 |
| Msa0690250 | Msa1174010 | 0.821567 | 3.770302e-53 | -8.615850e-47 |
| Msa0692080 | Msa1174010 | 0.803341 | 3.650576e-49 | -8.615850e-47 |
| Msa0703230 | Msa1174010 | 0.800306 | 1.533506e-48 | -8.615850e-47 |
| Msa0725480 | Msa1174010 | -0.808382 | 3.182755e-50 | -8.615850e-47 |
| Msa0730180 | Msa1174010 | 0.803569 | 3.274165e-49 | -8.615850e-47 |
| Msa0743260 | Msa1174010 | 0.806219 | 9.148352e-50 | -8.615850e-47 |
| Msa0754720 | Msa1174010 | -0.801963 | 7.026089e-49 | -8.615850e-47 |
| Msa0759030 | Msa1174010 | 0.805964 | 1.034992e-49 | -8.615850e-47 |
| Msa0760380 | Msa1174010 | 0.804696 | 1.908504e-49 | -8.615850e-47 |
| Msa0776220 | Msa1174010 | 0.800890 | 1.165403e-48 | -8.615850e-47 |
| Msa0778320 | Msa1174010 | 0.800612 | 1.328000e-48 | -8.615850e-47 |
| Msa0787750 | Msa1174010 | 0.816278 | 6.003844e-52 | -8.615850e-47 |
| Msa0792790 | Msa1174010 | -0.802472 | 5.520807e-49 | -8.615850e-47 |
| Msa0813720 | Msa1174010 | 0.819447 | 1.156073e-52 | -8.615850e-47 |
| Msa0139900 | Msa1174010 | 0.813222 | 2.855401e-51 | -8.615850e-47 |
| Msa0140570 | Msa1174010 | 0.802713 | 4.924482e-49 | -8.615850e-47 |
| Msa0141830 | Msa1174010 | 0.824768 | 6.749043e-54 | -8.615850e-47 |
| Msa0143080 | Msa1174010 | 0.805065 | 1.598194e-49 | -8.615850e-47 |
| Msa0143140 | Msa1174010 | -0.801715 | 7.900648e-49 | -8.615850e-47 |
| Msa0143430 | Msa1174010 | 0.824777 | 6.716818e-54 | -8.615850e-47 |
| Msa0145950 | Msa1174010 | 0.825394 | 4.801460e-54 | -8.615850e-47 |
| Msa0146470 | Msa1174010 | 0.804842 | 1.778653e-49 | -8.615850e-47 |
| Msa0168100 | Msa1174010 | 0.824569 | 7.518438e-54 | -8.615850e-47 |
| Msa0169570 | Msa1174010 | 0.803258 | 3.797930e-49 | -8.615850e-47 |
| Msa0172350 | Msa1174010 | 0.853044 | 3.099107e-61 | -8.615850e-47 |
| Msa0172960 | Msa1174010 | -0.834740 | 2.516081e-56 | -8.615850e-47 |
| Msa0173740 | Msa1174010 | 0.832582 | 8.704959e-56 | -8.615850e-47 |
| Msa0173820 | Msa1174010 | 0.837021 | 6.646345e-57 | -8.615850e-47 |
| Msa0173830 | Msa1174010 | 0.821755 | 3.411103e-53 | -8.615850e-47 |
| Msa0182930 | Msa1174010 | 0.824716 | 6.943909e-54 | -8.615850e-47 |
| Msa0183620 | Msa1174010 | 0.806726 | 7.150601e-50 | -8.615850e-47 |
| Msa0183830 | Msa1174010 | 0.807128 | 5.879272e-50 | -8.615850e-47 |
| Msa0196130 | Msa1174010 | -0.801316 | 9.538833e-49 | -8.615850e-47 |
| Msa0200950 | Msa1174010 | -0.807369 | 5.228885e-50 | -8.615850e-47 |
| Msa0200970 | Msa1174010 | 0.814398 | 1.572574e-51 | -8.615850e-47 |
| Msa0207000 | Msa1174010 | 0.802318 | 5.938208e-49 | -8.615850e-47 |
| Msa0222920 | Msa1174010 | 0.803986 | 2.683151e-49 | -8.615850e-47 |
| Msa0224730 | Msa1174010 | 0.823263 | 1.521892e-53 | -8.615850e-47 |
| Msa0228340 | Msa1174010 | -0.812773 | 3.581522e-51 | -8.615850e-47 |
| Msa0230550 | Msa1174010 | -0.841970 | 3.440287e-58 | -8.615850e-47 |
| Msa0236980 | Msa1174010 | 0.807599 | 4.672915e-50 | -8.615850e-47 |
| Msa0238070 | Msa1174010 | -0.801013 | 1.099833e-48 | -8.615850e-47 |
| Msa0369220 | Msa1174010 | 0.801911 | 7.199846e-49 | -8.615850e-47 |
| Msa0372670 | Msa1174010 | 0.811008 | 8.680015e-51 | -8.615850e-47 |
| Msa0376510 | Msa1174010 | 0.850997 | 1.181939e-60 | -8.615850e-47 |
| Msa0378080 | Msa1174010 | 0.814947 | 1.188562e-51 | -8.615850e-47 |
| Msa0380040 | Msa1174010 | 0.829715 | 4.407736e-55 | -8.615850e-47 |
| Msa0392070 | Msa1174010 | 0.808799 | 2.592846e-50 | -8.615850e-47 |
| Msa0392940 | Msa1174010 | 0.808651 | 2.789583e-50 | -8.615850e-47 |
| Msa0398640 | Msa1174010 | 0.804788 | 1.825741e-49 | -8.615850e-47 |
| Msa0402330 | Msa1174010 | 0.822270 | 2.590760e-53 | -8.615850e-47 |
| Msa0414950 | Msa1174010 | -0.834253 | 3.335452e-56 | -8.615850e-47 |
| Msa0423360 | Msa1174010 | -0.808178 | 3.517997e-50 | -8.615850e-47 |
| Msa0424920 | Msa1174010 | 0.824000 | 1.023126e-53 | -8.615850e-47 |
| Msa0425050 | Msa1174010 | 0.843711 | 1.184767e-58 | -8.615850e-47 |
| Msa0425940 | Msa1174010 | 0.814656 | 1.378797e-51 | -8.615850e-47 |
| Msa0427200 | Msa1174010 | 0.802865 | 4.580100e-49 | -8.615850e-47 |
| Msa0429290 | Msa1174010 | 0.830169 | 3.417433e-55 | -8.615850e-47 |
| Msa0430620 | Msa1174010 | 0.815362 | 9.609752e-52 | -8.615850e-47 |
| Msa0431430 | Msa1174010 | 0.809974 | 1.450951e-50 | -8.615850e-47 |
| Msa0436460 | Msa1174010 | 0.810438 | 1.152631e-50 | -8.615850e-47 |
| Msa0461640 | Msa1174010 | 0.809097 | 2.239587e-50 | -8.615850e-47 |
| Msa0465790 | Msa1174010 | 0.801341 | 9.426217e-49 | -8.615850e-47 |
| Msa0469910 | Msa1174010 | -0.830104 | 3.543042e-55 | -8.615850e-47 |
| Msa0469970 | Msa1174010 | 0.803933 | 2.751949e-49 | -8.615850e-47 |
| Msa0475580 | Msa1174010 | 0.814578 | 1.434785e-51 | -8.615850e-47 |
| Msa0480320 | Msa1174010 | 0.815657 | 8.262148e-52 | -8.615850e-47 |
| Msa0990520 | Msa1174010 | 0.829746 | 4.331991e-55 | -8.615850e-47 |
| Msa1002040 | Msa1174010 | 0.804809 | 1.807369e-49 | -8.615850e-47 |
| Msa1004500 | Msa1174010 | 0.814230 | 1.712779e-51 | -8.615850e-47 |
| Msa1012700 | Msa1174010 | 0.803196 | 3.913284e-49 | -8.615850e-47 |
| Msa1012810 | Msa1174010 | 0.823557 | 1.299225e-53 | -8.615850e-47 |
| Msa1014270 | Msa1174010 | 0.800636 | 1.313276e-48 | -8.615850e-47 |
| Msa1018790 | Msa1174010 | 0.823030 | 1.724775e-53 | -8.615850e-47 |
| Msa1040830 | Msa1174010 | 0.803665 | 3.128608e-49 | -8.615850e-47 |
| Msa1044340 | Msa1174010 | 0.819723 | 9.996106e-53 | -8.615850e-47 |
| Msa1046870 | Msa1174010 | 0.818042 | 2.409356e-52 | -8.615850e-47 |
| Msa1047400 | Msa1174010 | 0.803122 | 4.052892e-49 | -8.615850e-47 |
| Msa1049410 | Msa1174010 | 0.820229 | 7.659027e-53 | -8.615850e-47 |
| Msa1054240 | Msa1174010 | 0.824688 | 7.049853e-54 | -8.615850e-47 |
| Msa1058010 | Msa1174010 | 0.820453 | 6.804834e-53 | -8.615850e-47 |
| Msa1082700 | Msa1174010 | 0.852369 | 4.830109e-61 | -8.615850e-47 |
| Msa1083210 | Msa1174010 | 0.818283 | 2.125133e-52 | -8.615850e-47 |
| Msa1094420 | Msa1174010 | 0.816927 | 4.296490e-52 | -8.615850e-47 |
| Msa0242680 | Msa1174010 | 0.912511 | 1.792290e-83 | -8.615850e-47 |
| Msa0244270 | Msa1174010 | 0.820062 | 8.364318e-53 | -8.615850e-47 |
| Msa0246690 | Msa1174010 | 0.800815 | 1.207598e-48 | -8.615850e-47 |
| Msa0259560 | Msa1174010 | 0.801172 | 1.020654e-48 | -8.615850e-47 |
| Msa0259860 | Msa1174010 | -0.811923 | 5.491799e-51 | -8.615850e-47 |
| Msa0264350 | Msa1174010 | 0.812904 | 3.352587e-51 | -8.615850e-47 |
| Msa0267760 | Msa1174010 | 0.858254 | 9.343551e-63 | -8.615850e-47 |
| Msa0280900 | Msa1174010 | 0.928045 | 5.026894e-92 | -8.615850e-47 |
| Msa0284780 | Msa1174010 | 0.812493 | 4.123753e-51 | -8.615850e-47 |
| Msa0288240 | Msa1174010 | 0.817545 | 3.119551e-52 | -8.615850e-47 |
| Msa0296760 | Msa1174010 | 0.811353 | 7.305150e-51 | -8.615850e-47 |
| Msa0297920 | Msa1174010 | 0.814301 | 1.652135e-51 | -8.615850e-47 |
| Msa0298970 | Msa1174010 | 0.817585 | 3.054978e-52 | -8.615850e-47 |
| Msa0301180 | Msa1174010 | 0.815254 | 1.015978e-51 | -8.615850e-47 |
| Msa0302450 | Msa1174010 | 0.814739 | 1.321568e-51 | -8.615850e-47 |
| Msa0318250 | Msa1174010 | 0.813522 | 2.452944e-51 | -8.615850e-47 |
| Msa0319200 | Msa1174010 | 0.812095 | 5.036707e-51 | -8.615850e-47 |
| Msa0320100 | Msa1174010 | 0.876176 | 1.718573e-68 | -8.615850e-47 |
| Msa0326670 | Msa1174010 | 0.803167 | 3.966768e-49 | -8.615850e-47 |
| Msa0328210 | Msa1174010 | 0.804299 | 2.309231e-49 | -8.615850e-47 |
| Msa0344640 | Msa1174010 | 0.805147 | 1.536104e-49 | -8.615850e-47 |
| Msa0349060 | Msa1174010 | 0.809795 | 1.586198e-50 | -8.615850e-47 |
| Msa0355270 | Msa1174010 | 0.819230 | 1.295219e-52 | -8.615850e-47 |
| Msa1129560 | Msa1174010 | 0.828640 | 8.035616e-55 | -8.615850e-47 |
| Msa1129720 | Msa1174010 | 0.801961 | 7.031532e-49 | -8.615850e-47 |
| Msa1134110 | Msa1174010 | 0.806064 | 9.862959e-50 | -8.615850e-47 |
| Msa1139810 | Msa1174010 | 0.801269 | 9.752267e-49 | -8.615850e-47 |
| Msa1159990 | Msa1174010 | 0.815330 | 9.770706e-52 | -8.615850e-47 |
| Msa1171690 | Msa1174010 | 0.835303 | 1.815151e-56 | -8.615850e-47 |
| Msa1174010 | Msa1223840 | 0.806717 | 7.182178e-50 | -8.615850e-47 |
| Msa1174010 | Msa1224670 | 0.827214 | 1.770646e-54 | -8.615850e-47 |
| Msa1174010 | Msa1237030 | 0.810179 | 1.311118e-50 | -8.615850e-47 |
| Msa1174010 | Msa1242330 | 0.813849 | 2.077985e-51 | -8.615850e-47 |
| Msa1174010 | Msa1246530 | -0.808818 | 2.568840e-50 | -8.615850e-47 |
| Msa1174010 | Msa1249870 | 0.846112 | 2.664388e-59 | -8.615850e-47 |
| Msa1174010 | Msa1263030 | 0.815012 | 1.149426e-51 | -8.615850e-47 |
| Msa1174010 | Msa1264020 | 0.813863 | 2.064054e-51 | -8.615850e-47 |
| Msa1174010 | Msa1269580 | -0.802636 | 5.107911e-49 | -8.615850e-47 |
| Msa1174010 | Msa1284520 | 0.813095 | 3.044341e-51 | -8.615850e-47 |
| Msa1174010 | Msa1316830 | 0.819735 | 9.935933e-53 | -8.615850e-47 |
| Msa1174010 | Msa1323060 | 0.800453 | 1.431083e-48 | -8.615850e-47 |
| Msa1174010 | Msa1335940 | 0.800065 | 1.716456e-48 | -8.615850e-47 |
| Msa1174010 | Msa1337090 | 0.836518 | 8.930809e-57 | -8.615850e-47 |
| Msa1174010 | Msa1354040 | 0.811589 | 6.491758e-51 | -8.615850e-47 |
| Msa1174010 | Msa1373510 | 0.812392 | 4.338996e-51 | -8.615850e-47 |
| Msa1174010 | Msa1379570 | 0.834947 | 2.232141e-56 | -8.615850e-47 |
| Msa1174010 | Msa1379990 | 0.814501 | 1.491754e-51 | -8.615850e-47 |
| Msa1174010 | Msa1382310 | 0.812852 | 3.441060e-51 | -8.615850e-47 |
| Msa1174010 | Msa1385900 | 0.816059 | 6.722462e-52 | -8.615850e-47 |
| Msa1174010 | Msa1386110 | -0.808552 | 2.927654e-50 | -8.615850e-47 |
| Msa1174010 | Msa1390310 | 0.845578 | 3.721491e-59 | -8.615850e-47 |
| Msa1174010 | Msa1397050 | 0.817178 | 3.772936e-52 | -8.615850e-47 |
| Msa1174010 | Msa1404730 | 0.801501 | 8.741187e-49 | -8.615850e-47 |
| Msa1174010 | Msa1417120 | 0.815718 | 8.010222e-52 | -8.615850e-47 |
| Msa1174010 | Msa1417870 | 0.800944 | 1.136460e-48 | -8.615850e-47 |
| Msa1174010 | Msa1419800 | -0.815325 | 9.797463e-52 | -8.615850e-47 |
| Msa1174010 | Msa1427660 | -0.808643 | 2.799972e-50 | -8.615850e-47 |
| Msa1174010 | Msa1449880 | 0.818315 | 2.090472e-52 | -8.615850e-47 |
| Msa1174010 | Msa1453620 | 0.813702 | 2.238754e-51 | -8.615850e-47 |
| Msa1174010 | Msa1460470 | 0.805835 | 1.101593e-49 | -8.615850e-47 |
| Msa1174010 | Msa1462500 | 0.802484 | 5.488556e-49 | -8.615850e-47 |
| Msa0490300 | Msa1174010 | 0.807388 | 5.179582e-50 | -8.615850e-47 |
| Msa0490350 | Msa1174010 | 0.819083 | 1.399123e-52 | -8.615850e-47 |
| Msa0508200 | Msa1174010 | 0.827359 | 1.634319e-54 | -8.615850e-47 |
| Msa0508590 | Msa1174010 | 0.817668 | 2.925941e-52 | -8.615850e-47 |
| Msa0508630 | Msa1174010 | 0.816711 | 4.802999e-52 | -8.615850e-47 |
| Msa0516320 | Msa1174010 | 0.815192 | 1.048343e-51 | -8.615850e-47 |
| Msa0518040 | Msa1174010 | 0.806394 | 8.404422e-50 | -8.615850e-47 |
| Msa0519220 | Msa1174010 | 0.827574 | 1.451172e-54 | -8.615850e-47 |
| Msa0520320 | Msa1174010 | 0.803693 | 3.085600e-49 | -8.615850e-47 |
| Msa0524120 | Msa1174010 | 0.816765 | 4.670547e-52 | -8.615850e-47 |
| Msa0526700 | Msa1174010 | 0.815677 | 8.177591e-52 | -8.615850e-47 |
| Msa0526710 | Msa1174010 | 0.852115 | 5.706072e-61 | -8.615850e-47 |
| Msa0527600 | Msa1174010 | 0.817313 | 3.517680e-52 | -8.615850e-47 |
| Msa0535030 | Msa1174010 | 0.846240 | 2.459321e-59 | -8.615850e-47 |
| Msa0535060 | Msa1174010 | 0.839791 | 1.282488e-57 | -8.615850e-47 |
| Msa0535450 | Msa1174010 | 0.806753 | 7.059198e-50 | -8.615850e-47 |
| Msa0541860 | Msa1174010 | 0.800969 | 1.122787e-48 | -8.615850e-47 |
| Msa0546380 | Msa1174010 | 0.814281 | 1.669048e-51 | -8.615850e-47 |
| Msa0546740 | Msa1174010 | 0.806305 | 8.775960e-50 | -8.615850e-47 |
| Msa0553150 | Msa1174010 | 0.819036 | 1.434110e-52 | -8.615850e-47 |
| Msa0564930 | Msa1174010 | 0.819423 | 1.170431e-52 | -8.615850e-47 |
| Msa0577940 | Msa1174010 | -0.826895 | 2.110129e-54 | -8.615850e-47 |
| Msa0590680 | Msa1174010 | 0.832678 | 8.244032e-56 | -8.615850e-47 |
| Msa0591060 | Msa1174010 | 0.822056 | 2.904585e-53 | -8.615850e-47 |
| Msa0591770 | Msa1174010 | 0.861477 | 9.984668e-64 | -8.615850e-47 |
| Msa0866120 | Msa1174010 | 0.817455 | 3.268306e-52 | -8.615850e-47 |
| Msa0874500 | Msa1174010 | 0.841708 | 4.034214e-58 | -8.615850e-47 |
| Msa0874760 | Msa1174010 | 0.809380 | 1.946892e-50 | -8.615850e-47 |
| Msa0883030 | Msa1174010 | 0.801874 | 7.328710e-49 | -8.615850e-47 |
| Msa0890250 | Msa1174010 | 0.828272 | 9.856516e-55 | -8.615850e-47 |
| Msa0900630 | Msa1174010 | 0.801943 | 7.094081e-49 | -8.615850e-47 |
| Msa0903330 | Msa1174010 | 0.838675 | 2.497255e-57 | -8.615850e-47 |
| Msa0907700 | Msa1174010 | 0.830590 | 2.696439e-55 | -8.615850e-47 |
| Msa0922540 | Msa1174010 | 0.831335 | 1.769782e-55 | -8.615850e-47 |
| Msa0925160 | Msa1174010 | 0.826140 | 3.194576e-54 | -8.615850e-47 |
| Msa0930330 | Msa1174010 | 0.800736 | 1.253025e-48 | -8.615850e-47 |
| Msa0931610 | Msa1174010 | 0.812182 | 4.822519e-51 | -8.615850e-47 |
| Msa0955260 | Msa1174010 | 0.800610 | 1.329210e-48 | -8.615850e-47 |
| Msa0970570 | Msa1174010 | -0.817470 | 3.243847e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174010 | MtrunA17_Chr2g0294971 | 95.455 | 110 | 4 | 1 | 1 | 110 | 1 | 109 | 2.02e-75 | 223 |
| Msa1174010 | MtrunA17_Chr1g0192511 | 55.056 | 89 | 36 | 1 | 20 | 108 | 24 | 108 | 9.00e-33 | 115 |
| Msa1174010 | MtrunA17_Chr7g0271931 | 51.685 | 89 | 38 | 1 | 20 | 103 | 32 | 120 | 9.28e-30 | 108 |
| Msa1174010 | MtrunA17_Chr7g0269721 | 43.269 | 104 | 57 | 1 | 14 | 115 | 5 | 108 | 1.53e-25 | 96.3 |
| Msa1174010 | MtrunA17_Chr1g0192501 | 47.887 | 142 | 58 | 8 | 97 | 228 | 3 | 138 | 9.67e-24 | 92.4 |
| Msa1174010 | MtrunA17_Chr4g0046711 | 38.532 | 109 | 58 | 3 | 1 | 104 | 1 | 105 | 4.94e-21 | 84.3 |
| Msa1174010 | MtrunA17_Chr7g0271941 | 48.000 | 125 | 57 | 4 | 110 | 228 | 1 | 123 | 2.66e-20 | 83.2 |
| Msa1174010 | MtrunA17_Chr2g0294981 | 100.000 | 34 | 0 | 0 | 195 | 228 | 8 | 41 | 1.51e-16 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174010 | AT5G49230.1 | 47.863 | 234 | 93 | 8 | 1 | 228 | 1 | 211 | 2.95e-55 | 176 |
| Msa1174010 | AT3G05700.1 | 44.770 | 239 | 105 | 9 | 1 | 228 | 1 | 223 | 7.47e-52 | 167 |
| Msa1174010 | AT5G49230.2 | 46.154 | 234 | 92 | 8 | 1 | 228 | 1 | 206 | 1.69e-51 | 166 |
| Msa1174010 | AT3G06760.1 | 49.763 | 211 | 88 | 7 | 23 | 228 | 27 | 224 | 2.62e-51 | 166 |
| Msa1174010 | AT5G26990.1 | 44.167 | 240 | 104 | 9 | 1 | 228 | 1 | 222 | 6.27e-51 | 165 |
| Msa1174010 | AT3G05700.2 | 45.178 | 197 | 82 | 8 | 1 | 187 | 1 | 181 | 6.25e-43 | 144 |
| Msa1174010 | AT1G56280.1 | 42.991 | 214 | 87 | 8 | 20 | 226 | 14 | 199 | 2.80e-41 | 140 |
| Msa1174010 | AT1G56280.2 | 44.162 | 197 | 78 | 8 | 37 | 226 | 34 | 205 | 9.33e-38 | 131 |
| Msa1174010 | AT4G02200.1 | 40.415 | 193 | 89 | 6 | 39 | 225 | 37 | 209 | 8.93e-34 | 121 |
| Msa1174010 | AT3G06760.2 | 41.629 | 221 | 101 | 8 | 23 | 228 | 27 | 234 | 3.72e-32 | 117 |
| Msa1174010 | AT4G02200.2 | 39.459 | 185 | 86 | 6 | 39 | 217 | 37 | 201 | 2.69e-30 | 112 |
| Msa1174010 | AT4G02200.3 | 37.681 | 207 | 89 | 7 | 39 | 225 | 37 | 223 | 1.21e-29 | 110 |
| Msa1174010 | AT1G02750.1 | 36.041 | 197 | 97 | 6 | 39 | 227 | 41 | 216 | 3.59e-28 | 106 |
| Msa1174010 | AT1G02750.2 | 30.928 | 194 | 95 | 4 | 39 | 227 | 41 | 200 | 4.46e-21 | 87.8 |
Find 70 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACTCTCTATCTTCAATTT+AGG | 0.061459 | 8_1:+5044616 | Msa1174010:five_prime_UTR |
| CACTCTCTATCTTCAATTTA+GGG | 0.237702 | 8_1:+5044617 | Msa1174010:five_prime_UTR |
| GCAGGATTGCATTCTCTTCT+TGG | 0.245703 | 8_1:+5046636 | Msa1174010:CDS |
| GTGGTGGTGGTGATGATTTA+AGG | 0.255964 | 8_1:+5044863 | Msa1174010:CDS |
| CTAGTGTAGCAGCTGAAATA+AGG | 0.265670 | 8_1:-5047620 | None:intergenic |
| TGTAGCTGGTATACTATAAT+AGG | 0.281627 | 8_1:+5047400 | Msa1174010:three_prime_UTR |
| CTACACTAGACTGACATAAT+TGG | 0.286778 | 8_1:+5047634 | Msa1174010:three_prime_UTR |
| TCATAATCTTCAGCACAAAA+AGG | 0.288334 | 8_1:-5044901 | None:intergenic |
| ATTACATATTTACTCGATAA+AGG | 0.293138 | 8_1:-5047545 | None:intergenic |
| AAGTTTACGTGCAGCGTAAA+AGG | 0.305767 | 8_1:+5046559 | Msa1174010:CDS |
| AGAAAAGAGTTGAGGGAAGC+AGG | 0.309169 | 8_1:+5046618 | Msa1174010:CDS |
| TTGAATAGGTGCATATTAGA+TGG | 0.343964 | 8_1:-5047588 | None:intergenic |
| AAAGAAACCAACTTTCAAAA+AGG | 0.347692 | 8_1:-5046051 | None:intergenic |
| ACAGCTTCGTCACCAACAAC+TGG | 0.357688 | 8_1:-5046726 | None:intergenic |
| AACGATTGCAACAAAGTATC+AGG | 0.362978 | 8_1:-5046693 | None:intergenic |
| TTTCGAGCTATCGTTTACTA+TGG | 0.363939 | 8_1:-5046781 | None:intergenic |
| TTCAGGTGTGTCCTGCTTGT+GGG | 0.376343 | 8_1:+5045964 | Msa1174010:intron |
| CAAAGTATCAGGTTCGGAAT+TGG | 0.385398 | 8_1:-5046682 | None:intergenic |
| TGGTGGTGGTGATGATTTAA+GGG | 0.397394 | 8_1:+5044864 | Msa1174010:CDS |
| GTTTACTATGGCAGCTTCAA+TGG | 0.397661 | 8_1:-5046769 | None:intergenic |
| TAATGAATGTATCTATTGTT+AGG | 0.400511 | 8_1:+5047564 | Msa1174010:three_prime_UTR |
| AATATGCACCTATTCAAATA+TGG | 0.407575 | 8_1:+5047594 | Msa1174010:three_prime_UTR |
| TAGTGTAGCAGCTGAAATAA+GGG | 0.424904 | 8_1:-5047619 | None:intergenic |
| ATGAATCAGAGTCCATGTTT+TGG | 0.426328 | 8_1:-5044654 | None:intergenic |
| AGCAGTGCATGCACCTGGTT+TGG | 0.429277 | 8_1:+5047686 | Msa1174010:three_prime_UTR |
| CGCCGTTACTATTCTCGATC+CGG | 0.436721 | 8_1:+5044706 | Msa1174010:CDS |
| TAAGGGGACCATATTTGAAT+AGG | 0.442155 | 8_1:-5047602 | None:intergenic |
| AAAACATGGACTCTGATTCA+TGG | 0.453838 | 8_1:+5044656 | Msa1174010:exon |
| GGATTGCATTCTCTTCTTGG+AGG | 0.458470 | 8_1:+5046639 | Msa1174010:CDS |
| TTTCAGGTGTGTCCTGCTTG+TGG | 0.467996 | 8_1:+5045963 | Msa1174010:intron |
| CGAAGGTTTGATTTCGTGCA+AGG | 0.485172 | 8_1:+5047333 | Msa1174010:CDS |
| GTTATAATTGCAATTGTAGC+TGG | 0.487425 | 8_1:+5047386 | Msa1174010:exon |
| GTTATTTAGAAAAGAGTTGA+GGG | 0.489200 | 8_1:+5046611 | Msa1174010:CDS |
| GATGCTGAACCTGGTGGTGG+TGG | 0.514579 | 8_1:+5044850 | Msa1174010:CDS |
| AGTATCAGGTTCGGAATTGG+AGG | 0.520777 | 8_1:-5046679 | None:intergenic |
| GCAGGAGCTGATCGCGAGGG+AGG | 0.524927 | 8_1:+5047424 | Msa1174010:three_prime_UTR |
| TTATAACTCATCATCAAGAA+TGG | 0.527350 | 8_1:-5047370 | None:intergenic |
| CAGAGTGGCAGTAGCTAGAT+CGG | 0.528724 | 8_1:+5047465 | Msa1174010:three_prime_UTR |
| CGTTATTTAGAAAAGAGTTG+AGG | 0.531210 | 8_1:+5046610 | Msa1174010:CDS |
| TGGTATACTATAATAGGAGC+AGG | 0.532207 | 8_1:+5047406 | Msa1174010:three_prime_UTR |
| CAGGAGCTGATCGCGAGGGA+GGG | 0.532264 | 8_1:+5047425 | Msa1174010:three_prime_UTR |
| CTAAAAGCAGTGCATGCACC+TGG | 0.532509 | 8_1:+5047681 | Msa1174010:three_prime_UTR |
| TAGCTCGAAAGATGATTTCG+TGG | 0.542543 | 8_1:+5046794 | Msa1174010:CDS |
| TTGCAACAAAGTATCAGGTT+CGG | 0.543065 | 8_1:-5046688 | None:intergenic |
| ATCCTCTTCAAGCTAACACT+GGG | 0.551131 | 8_1:+5044959 | Msa1174010:CDS |
| AGGAGCAGGAGCTGATCGCG+AGG | 0.557148 | 8_1:+5047420 | Msa1174010:three_prime_UTR |
| CATCCTCTTCAAGCTAACAC+TGG | 0.567489 | 8_1:+5044958 | Msa1174010:CDS |
| CTTCTCTACTCGATCCTCGT+CGG | 0.568903 | 8_1:-5047307 | None:intergenic |
| GGAAATGATGATGCTGAACC+TGG | 0.576479 | 8_1:+5044841 | Msa1174010:CDS |
| ACCCCAGTGTTAGCTTGAAG+AGG | 0.580064 | 8_1:-5044961 | None:intergenic |
| CGAAAGATGATTTCGTGGAA+AGG | 0.582410 | 8_1:+5046799 | Msa1174010:CDS |
| GGAGCAGGAGCTGATCGCGA+GGG | 0.589112 | 8_1:+5047421 | Msa1174010:three_prime_UTR |
| TTCGGAATTGGAGGAAGCTG+TGG | 0.593717 | 8_1:-5046670 | None:intergenic |
| GAAGGTTTGATTTCGTGCAA+GGG | 0.604633 | 8_1:+5047334 | Msa1174010:CDS |
| CGTAAAAGGAGGGTGAGGAA+AGG | 0.608256 | 8_1:+5046573 | Msa1174010:CDS |
| CAGCTTCGTCACCAACAACT+GGG | 0.608504 | 8_1:-5046725 | None:intergenic |
| TTTACGTGCAGCGTAAAAGG+AGG | 0.609185 | 8_1:+5046562 | Msa1174010:CDS |
| TGCAGCGTAAAAGGAGGGTG+AGG | 0.609548 | 8_1:+5046568 | Msa1174010:CDS |
| AAATCATCACCACCACCACC+AGG | 0.612097 | 8_1:-5044859 | None:intergenic |
| GATGATGCTGAACCTGGTGG+TGG | 0.614096 | 8_1:+5044847 | Msa1174010:CDS |
| TAACTCATCATCAAGAATGG+TGG | 0.628185 | 8_1:-5047367 | None:intergenic |
| TCGTCGGAAAGCTGTACTTG+TGG | 0.638527 | 8_1:-5047291 | None:intergenic |
| AACCGGATCGAGAATAGTAA+CGG | 0.650025 | 8_1:-5044708 | None:intergenic |
| ATCGAGTAGAGAAGACACGA+AGG | 0.652664 | 8_1:+5047316 | Msa1174010:CDS |
| AGTGTAGCAGCTGAAATAAG+GGG | 0.660186 | 8_1:-5047618 | None:intergenic |
| TTACGTGCAGCGTAAAAGGA+GGG | 0.661430 | 8_1:+5046563 | Msa1174010:CDS |
| TTCATTCGAGTGTTACAGAG+TGG | 0.673676 | 8_1:+5047450 | Msa1174010:three_prime_UTR |
| ACAAGTACAGCTTTCCGACG+AGG | 0.683663 | 8_1:+5047293 | Msa1174010:CDS |
| AATGATGATGCTGAACCTGG+TGG | 0.756267 | 8_1:+5044844 | Msa1174010:CDS |
| TCCTCTTCAAGCTAACACTG+GGG | 0.784823 | 8_1:+5044960 | Msa1174010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTAAATGATAATTATGA+TGG | - | chr8_1:5044738-5044757 | None:intergenic | 10.0% |
| !!! | AATAAAGATATGTTTAATTT+TGG | + | chr8_1:5045184-5045203 | Msa1174010:intron | 10.0% |
| !!! | TTTTATTACATAAATTTGAT+AGG | + | chr8_1:5045562-5045581 | Msa1174010:intron | 10.0% |
| !! | TTTATTCAAAATTGTAATTG+AGG | - | chr8_1:5045170-5045189 | None:intergenic | 15.0% |
| !!! | CAACAATTTATTTTAAAATG+TGG | + | chr8_1:5045309-5045328 | Msa1174010:intron | 15.0% |
| !!! | TTAAAATGTGGTTATATTTT+AGG | + | chr8_1:5045321-5045340 | Msa1174010:intron | 15.0% |
| !!! | TAAAATGTGGTTATATTTTA+GGG | + | chr8_1:5045322-5045341 | Msa1174010:intron | 15.0% |
| !!! | TAAAAAATGTACACATTTTT+CGG | - | chr8_1:5046270-5046289 | None:intergenic | 15.0% |
| !!! | AAAATGTGTACATTTTTTAA+TGG | + | chr8_1:5046271-5046290 | Msa1174010:intron | 15.0% |
| !!! | TTTAGTTTTGTTGAAATTGT+TGG | + | chr8_1:5044776-5044795 | Msa1174010:intron | 20.0% |
| !!! | TTCAGTTTTTCACATATATT+AGG | + | chr8_1:5045074-5045093 | Msa1174010:intron | 20.0% |
| !!! | GTTTTAATTAAGGTTATACA+TGG | + | chr8_1:5045231-5045250 | Msa1174010:intron | 20.0% |
| !!! | AAAATGTGGTTATATTTTAG+GGG | + | chr8_1:5045323-5045342 | Msa1174010:intron | 20.0% |
| !!! | AAAATATCCTTTTTGAAAGT+TGG | + | chr8_1:5046044-5046063 | Msa1174010:CDS | 20.0% |
| !! | AATGCAATAAAATATGAACA+TGG | - | chr8_1:5046207-5046226 | None:intergenic | 20.0% |
| !!! | TCAAATAAAATTTGTTTTCC+AGG | - | chr8_1:5046230-5046249 | None:intergenic | 20.0% |
| !!! | TCTATATAAAAGTATAGTAC+CGG | + | chr8_1:5047024-5047043 | Msa1174010:intron | 20.0% |
| !! | ATTACATATTTACTCGATAA+AGG | - | chr8_1:5047548-5047567 | None:intergenic | 20.0% |
| !! | TAATGAATGTATCTATTGTT+AGG | + | chr8_1:5047564-5047583 | Msa1174010:three_prime_UTR | 20.0% |
| !!! | ATAATTATGATGGTTCTAAC+CGG | - | chr8_1:5044728-5044747 | None:intergenic | 25.0% |
| !!! | GTTTTTAACTTTCAAACACT+TGG | + | chr8_1:5045206-5045225 | Msa1174010:intron | 25.0% |
| !!! | ACACTTGGTAGTTTTAATTA+AGG | + | chr8_1:5045221-5045240 | Msa1174010:intron | 25.0% |
| !!! | AAATGTGGTTATATTTTAGG+GGG | + | chr8_1:5045324-5045343 | Msa1174010:intron | 25.0% |
| ! | GTATTTAGTGCAATTTACTT+TGG | + | chr8_1:5045358-5045377 | Msa1174010:intron | 25.0% |
| ! | AAAGAGAAATCATAGATAAG+AGG | + | chr8_1:5045424-5045443 | Msa1174010:intron | 25.0% |
| ! | CATAAATTTGATAGGTTGTT+TGG | + | chr8_1:5045570-5045589 | Msa1174010:intron | 25.0% |
| ! | ATATAACATTATGCAGTGTT+TGG | + | chr8_1:5045660-5045679 | Msa1174010:intron | 25.0% |
| ! | TCTTCATAGAATAGATATAC+AGG | + | chr8_1:5045711-5045730 | Msa1174010:intron | 25.0% |
| ! | AAAGAAACCAACTTTCAAAA+AGG | - | chr8_1:5046054-5046073 | None:intergenic | 25.0% |
| !! | TTCATATTTTATTGCATTCC+TGG | + | chr8_1:5046209-5046228 | Msa1174010:intron | 25.0% |
| ! | CATGCTAAATATAAACATAC+TGG | - | chr8_1:5046341-5046360 | None:intergenic | 25.0% |
| ! | TTTATTTCAGTATCGTTAGA+TGG | + | chr8_1:5046419-5046438 | Msa1174010:intron | 25.0% |
| ! | TAATTAAAACAAGTTGTGTC+TGG | + | chr8_1:5046482-5046501 | Msa1174010:intron | 25.0% |
| ! | GTTATTTAGAAAAGAGTTGA+GGG | + | chr8_1:5046611-5046630 | Msa1174010:CDS | 25.0% |
| !!! | TTTATTTTTAACCCAGTTGT+TGG | + | chr8_1:5046714-5046733 | Msa1174010:CDS | 25.0% |
| ! | ATGTATATGGATACTATTGT+TGG | + | chr8_1:5046823-5046842 | Msa1174010:intron | 25.0% |
| !!! | TAAGTTGTAGGTATTTTTGT+AGG | + | chr8_1:5046878-5046897 | Msa1174010:intron | 25.0% |
| !!! | AAGTTGTAGGTATTTTTGTA+GGG | + | chr8_1:5046879-5046898 | Msa1174010:intron | 25.0% |
| ! | GAGTTAAGTAATCTATATAC+CGG | - | chr8_1:5047003-5047022 | None:intergenic | 25.0% |
| ! | TTATAACTCATCATCAAGAA+TGG | - | chr8_1:5047373-5047392 | None:intergenic | 25.0% |
| ! | AATATGCACCTATTCAAATA+TGG | + | chr8_1:5047594-5047613 | Msa1174010:three_prime_UTR | 25.0% |
| ACACTCTCTATCTTCAATTT+AGG | + | chr8_1:5044616-5044635 | Msa1174010:five_prime_UTR | 30.0% | |
| CACTCTCTATCTTCAATTTA+GGG | + | chr8_1:5044617-5044636 | Msa1174010:five_prime_UTR | 30.0% | |
| !!! | TGTTGGTGATGATTTGTTTT+TGG | + | chr8_1:5044793-5044812 | Msa1174010:intron | 30.0% |
| !!! | TGTTGTTTCAGATCTGTTTT+TGG | + | chr8_1:5044816-5044835 | Msa1174010:intron | 30.0% |
| !! | GTTGTTTCAGATCTGTTTTT+GGG | + | chr8_1:5044817-5044836 | Msa1174010:intron | 30.0% |
| CATAATCTTCAGCACAAAAA+GGG | - | chr8_1:5044903-5044922 | None:intergenic | 30.0% | |
| TCATAATCTTCAGCACAAAA+AGG | - | chr8_1:5044904-5044923 | None:intergenic | 30.0% | |
| !! | GTTATATTTTAGGGGGAAAA+AGG | + | chr8_1:5045331-5045350 | Msa1174010:intron | 30.0% |
| TTTAGTGCAATTTACTTTGG+AGG | + | chr8_1:5045361-5045380 | Msa1174010:intron | 30.0% | |
| AGAAATCATAGATAAGAGGA+GGG | + | chr8_1:5045428-5045447 | Msa1174010:intron | 30.0% | |
| GCTCATTAAAACTAATAAGC+AGG | - | chr8_1:5045843-5045862 | None:intergenic | 30.0% | |
| CTGATGATTGTGATAATTGA+TGG | + | chr8_1:5045927-5045946 | Msa1174010:intron | 30.0% | |
| ! | ATTGTGATAATTGATGGCAT+TGG | + | chr8_1:5045933-5045952 | Msa1174010:intron | 30.0% |
| ! | GCACCATTCATATATGTTTT+CGG | + | chr8_1:5046125-5046144 | Msa1174010:intron | 30.0% |
| ACACCGAAAACATATATGAA+TGG | - | chr8_1:5046131-5046150 | None:intergenic | 30.0% | |
| CAATTGATACACAAGTTTGT+TGG | + | chr8_1:5046168-5046187 | Msa1174010:intron | 30.0% | |
| CGTTATTTAGAAAAGAGTTG+AGG | + | chr8_1:5046610-5046629 | Msa1174010:CDS | 30.0% | |
| !! | GATTTCCTTTGCTTTAGAAA+TGG | + | chr8_1:5046851-5046870 | Msa1174010:intron | 30.0% |
| TAGAATATTATTTACCCCAC+CGG | + | chr8_1:5046981-5047000 | Msa1174010:intron | 30.0% | |
| TAAGTAATCTATATACCGGT+GGG | - | chr8_1:5046999-5047018 | None:intergenic | 30.0% | |
| TTAAGTAATCTATATACCGG+TGG | - | chr8_1:5047000-5047019 | None:intergenic | 30.0% | |
| ATCAATGTATGCAGAGTAAA+TGG | - | chr8_1:5047063-5047082 | None:intergenic | 30.0% | |
| ! | GCATACATTGATTAGATTTG+TGG | + | chr8_1:5047071-5047090 | Msa1174010:intron | 30.0% |
| TGATGAAATGTTGTATCCTT+AGG | + | chr8_1:5047117-5047136 | Msa1174010:intron | 30.0% | |
| GTTATAATTGCAATTGTAGC+TGG | + | chr8_1:5047386-5047405 | Msa1174010:exon | 30.0% | |
| TGTAGCTGGTATACTATAAT+AGG | + | chr8_1:5047400-5047419 | Msa1174010:three_prime_UTR | 30.0% | |
| TTGAATAGGTGCATATTAGA+TGG | - | chr8_1:5047591-5047610 | None:intergenic | 30.0% | |
| !!! | CCATGTTTTGGTGGAAAATT+CGG | - | chr8_1:5044645-5044664 | None:intergenic | 35.0% |
| ! | ATGAATCAGAGTCCATGTTT+TGG | - | chr8_1:5044657-5044676 | None:intergenic | 35.0% |
| AAAACATGGACTCTGATTCA+TGG | + | chr8_1:5044656-5044675 | Msa1174010:exon | 35.0% | |
| GAGAAATCATAGATAAGAGG+AGG | + | chr8_1:5045427-5045446 | Msa1174010:intron | 35.0% | |
| GAGCAATATAAGAGAGAGAT+AGG | + | chr8_1:5045452-5045471 | Msa1174010:intron | 35.0% | |
| ATATAAGAGAGAGATAGGCA+CGG | + | chr8_1:5045457-5045476 | Msa1174010:intron | 35.0% | |
| !! | CATCTTTAAAGTAGCGAATC+CGG | + | chr8_1:5045497-5045516 | Msa1174010:intron | 35.0% |
| CATACTAACTTTCCCATATC+CGG | - | chr8_1:5045519-5045538 | None:intergenic | 35.0% | |
| TAGTATGAGTTTGTGTTGAG+TGG | + | chr8_1:5045532-5045551 | Msa1174010:intron | 35.0% | |
| CTGTTCTACCAATACTTGTT+TGG | + | chr8_1:5045792-5045811 | Msa1174010:intron | 35.0% | |
| CTTGAACACCAAACAAGTAT+TGG | - | chr8_1:5045803-5045822 | None:intergenic | 35.0% | |
| GACAAAGACTGACTAAAACA+TGG | - | chr8_1:5045865-5045884 | None:intergenic | 35.0% | |
| !!! | GGTTGGTGTTTCTTTGTTTT+TGG | + | chr8_1:5045894-5045913 | Msa1174010:intron | 35.0% |
| !!! | TGGCATTGGTTATACTTTTC+AGG | + | chr8_1:5045947-5045966 | Msa1174010:intron | 35.0% |
| GAAAAACTTTGCATGTTGAG+TGG | - | chr8_1:5046024-5046043 | None:intergenic | 35.0% | |
| ! | TTGCAACAAAGTATCAGGTT+CGG | - | chr8_1:5046691-5046710 | None:intergenic | 35.0% |
| ! | AACGATTGCAACAAAGTATC+AGG | - | chr8_1:5046696-5046715 | None:intergenic | 35.0% |
| TTTCGAGCTATCGTTTACTA+TGG | - | chr8_1:5046784-5046803 | None:intergenic | 35.0% | |
| ! | TTCGTGGAAAGGTATGTATA+TGG | + | chr8_1:5046810-5046829 | Msa1174010:intron | 35.0% |
| !! | AGCATCCATTTCTAAAGCAA+AGG | - | chr8_1:5046859-5046878 | None:intergenic | 35.0% |
| AGAAATGGATGCTAAGTTGT+AGG | + | chr8_1:5046866-5046885 | Msa1174010:intron | 35.0% | |
| AAGTAATCTATATACCGGTG+GGG | - | chr8_1:5046998-5047017 | None:intergenic | 35.0% | |
| AATGTATGCAGAGTAAATGG+CGG | - | chr8_1:5047060-5047079 | None:intergenic | 35.0% | |
| ! | ATTTGTGGACACTTTGTTTG+AGG | + | chr8_1:5047086-5047105 | Msa1174010:intron | 35.0% |
| GTATCCTTAGGAATAATGTC+TGG | + | chr8_1:5047129-5047148 | Msa1174010:intron | 35.0% | |
| GAAACCAGACATTATTCCTA+AGG | - | chr8_1:5047136-5047155 | None:intergenic | 35.0% | |
| CTATTACAGTTCAAGTCACA+TGG | - | chr8_1:5047158-5047177 | None:intergenic | 35.0% | |
| ! | TACTGTCAGACTACATGTTT+TGG | - | chr8_1:5047254-5047273 | None:intergenic | 35.0% |
| TAACTCATCATCAAGAATGG+TGG | - | chr8_1:5047370-5047389 | None:intergenic | 35.0% | |
| TGGTATACTATAATAGGAGC+AGG | + | chr8_1:5047406-5047425 | Msa1174010:three_prime_UTR | 35.0% | |
| TAAGGGGACCATATTTGAAT+AGG | - | chr8_1:5047605-5047624 | None:intergenic | 35.0% | |
| TAGTGTAGCAGCTGAAATAA+GGG | - | chr8_1:5047622-5047641 | None:intergenic | 35.0% | |
| CTACACTAGACTGACATAAT+TGG | + | chr8_1:5047634-5047653 | Msa1174010:three_prime_UTR | 35.0% | |
| GGCTAACATAAAAAAGACTC+TGG | + | chr8_1:5047655-5047674 | Msa1174010:three_prime_UTR | 35.0% | |
| ! | ATTTTATTAGGGACCAAACC+AGG | - | chr8_1:5047702-5047721 | None:intergenic | 35.0% |
| ! | CCGAATTTTCCACCAAAACA+TGG | + | chr8_1:5044642-5044661 | Msa1174010:exon | 40.0% |
| !! | AATCAGAGTCCATGTTTTGG+TGG | - | chr8_1:5044654-5044673 | None:intergenic | 40.0% |
| AACCGGATCGAGAATAGTAA+CGG | - | chr8_1:5044711-5044730 | None:intergenic | 40.0% | |
| !!! | GTTTCAGATCTGTTTTTGGG+TGG | + | chr8_1:5044820-5044839 | Msa1174010:intron | 40.0% |
| !! | TGGTGGTGGTGATGATTTAA+GGG | + | chr8_1:5044864-5044883 | Msa1174010:CDS | 40.0% |
| ATCCTCTTCAAGCTAACACT+GGG | + | chr8_1:5044959-5044978 | Msa1174010:CDS | 40.0% | |
| !! | ATTTTAGGGGGAAAAAGGCT+TGG | + | chr8_1:5045336-5045355 | Msa1174010:intron | 40.0% |
| TAAAGTAGCGAATCCGGATA+TGG | + | chr8_1:5045503-5045522 | Msa1174010:intron | 40.0% | |
| AAAGTAGCGAATCCGGATAT+GGG | + | chr8_1:5045504-5045523 | Msa1174010:intron | 40.0% | |
| TCAGTCTTTGTCCATTGTCA+TGG | + | chr8_1:5045873-5045892 | Msa1174010:intron | 40.0% | |
| TCTTTGTCCATTGTCATGGT+TGG | + | chr8_1:5045877-5045896 | Msa1174010:intron | 40.0% | |
| AGAAACACCAACCATGACAA+TGG | - | chr8_1:5045887-5045906 | None:intergenic | 40.0% | |
| ! | TGCACGTAAACTTCTGGTTA+TGG | - | chr8_1:5046552-5046571 | None:intergenic | 40.0% |
| AAGTTTACGTGCAGCGTAAA+AGG | + | chr8_1:5046559-5046578 | Msa1174010:CDS | 40.0% | |
| ! | CAAAGTATCAGGTTCGGAAT+TGG | - | chr8_1:5046685-5046704 | None:intergenic | 40.0% |
| GTTTACTATGGCAGCTTCAA+TGG | - | chr8_1:5046772-5046791 | None:intergenic | 40.0% | |
| TAGCTCGAAAGATGATTTCG+TGG | + | chr8_1:5046794-5046813 | Msa1174010:CDS | 40.0% | |
| CGAAAGATGATTTCGTGGAA+AGG | + | chr8_1:5046799-5046818 | Msa1174010:CDS | 40.0% | |
| ATGTATGCAGAGTAAATGGC+GGG | - | chr8_1:5047059-5047078 | None:intergenic | 40.0% | |
| ATGTAGTCTGACAGTAGCTA+TGG | + | chr8_1:5047258-5047277 | Msa1174010:intron | 40.0% | |
| ! | GAAGGTTTGATTTCGTGCAA+GGG | + | chr8_1:5047334-5047353 | Msa1174010:CDS | 40.0% |
| TTCATTCGAGTGTTACAGAG+TGG | + | chr8_1:5047450-5047469 | Msa1174010:three_prime_UTR | 40.0% | |
| AGTGTAGCAGCTGAAATAAG+GGG | - | chr8_1:5047621-5047640 | None:intergenic | 40.0% | |
| CTAGTGTAGCAGCTGAAATA+AGG | - | chr8_1:5047623-5047642 | None:intergenic | 40.0% | |
| ! | GGAAATGATGATGCTGAACC+TGG | + | chr8_1:5044841-5044860 | Msa1174010:CDS | 45.0% |
| ! | AATGATGATGCTGAACCTGG+TGG | + | chr8_1:5044844-5044863 | Msa1174010:CDS | 45.0% |
| !! | GTGGTGGTGGTGATGATTTA+AGG | + | chr8_1:5044863-5044882 | Msa1174010:CDS | 45.0% |
| CATCCTCTTCAAGCTAACAC+TGG | + | chr8_1:5044958-5044977 | Msa1174010:CDS | 45.0% | |
| TCCTCTTCAAGCTAACACTG+GGG | + | chr8_1:5044960-5044979 | Msa1174010:CDS | 45.0% | |
| TTACGCTGCACGTAAACTTC+TGG | - | chr8_1:5046558-5046577 | None:intergenic | 45.0% | |
| TTTACGTGCAGCGTAAAAGG+AGG | + | chr8_1:5046562-5046581 | Msa1174010:CDS | 45.0% | |
| TTACGTGCAGCGTAAAAGGA+GGG | + | chr8_1:5046563-5046582 | Msa1174010:CDS | 45.0% | |
| AGAAAAGAGTTGAGGGAAGC+AGG | + | chr8_1:5046618-5046637 | Msa1174010:CDS | 45.0% | |
| GCAGGATTGCATTCTCTTCT+TGG | + | chr8_1:5046636-5046655 | Msa1174010:CDS | 45.0% | |
| GGATTGCATTCTCTTCTTGG+AGG | + | chr8_1:5046639-5046658 | Msa1174010:CDS | 45.0% | |
| AGTATCAGGTTCGGAATTGG+AGG | - | chr8_1:5046682-5046701 | None:intergenic | 45.0% | |
| ATCGAGTAGAGAAGACACGA+AGG | + | chr8_1:5047316-5047335 | Msa1174010:CDS | 45.0% | |
| ! | CGAAGGTTTGATTTCGTGCA+AGG | + | chr8_1:5047333-5047352 | Msa1174010:CDS | 45.0% |
| !!! | TAATAAAAATTGTATTTTTA+AGG | + | chr8_1:5045041-5045060 | Msa1174010:intron | 5.0% |
| CGCCGTTACTATTCTCGATC+CGG | + | chr8_1:5044706-5044725 | Msa1174010:CDS | 50.0% | |
| AAATCATCACCACCACCACC+AGG | - | chr8_1:5044862-5044881 | None:intergenic | 50.0% | |
| ! | ACCCCAGTGTTAGCTTGAAG+AGG | - | chr8_1:5044964-5044983 | None:intergenic | 50.0% |
| TCTTCAAGCTAACACTGGGG+TGG | + | chr8_1:5044963-5044982 | Msa1174010:intron | 50.0% | |
| CTTCAAGCTAACACTGGGGT+GGG | + | chr8_1:5044964-5044983 | Msa1174010:intron | 50.0% | |
| ! | TTTCAGGTGTGTCCTGCTTG+TGG | + | chr8_1:5045963-5045982 | Msa1174010:intron | 50.0% |
| TTCAGGTGTGTCCTGCTTGT+GGG | + | chr8_1:5045964-5045983 | Msa1174010:intron | 50.0% | |
| TCCTGCTTGTGGGCAAAAAG+TGG | + | chr8_1:5045974-5045993 | Msa1174010:CDS | 50.0% | |
| CCTGCTTGTGGGCAAAAAGT+GGG | + | chr8_1:5045975-5045994 | Msa1174010:CDS | 50.0% | |
| CTGCTTGTGGGCAAAAAGTG+GGG | + | chr8_1:5045976-5045995 | Msa1174010:CDS | 50.0% | |
| TTGTGGGCAAAAAGTGGGGA+TGG | + | chr8_1:5045980-5045999 | Msa1174010:CDS | 50.0% | |
| CGTAAAAGGAGGGTGAGGAA+AGG | + | chr8_1:5046573-5046592 | Msa1174010:CDS | 50.0% | |
| TTCGGAATTGGAGGAAGCTG+TGG | - | chr8_1:5046673-5046692 | None:intergenic | 50.0% | |
| CAGCTTCGTCACCAACAACT+GGG | - | chr8_1:5046728-5046747 | None:intergenic | 50.0% | |
| ACAGCTTCGTCACCAACAAC+TGG | - | chr8_1:5046729-5046748 | None:intergenic | 50.0% | |
| ! | AAATGGCGGGAACATGCATC+CGG | - | chr8_1:5047046-5047065 | None:intergenic | 50.0% |
| TCGTCGGAAAGCTGTACTTG+TGG | - | chr8_1:5047294-5047313 | None:intergenic | 50.0% | |
| ACAAGTACAGCTTTCCGACG+AGG | + | chr8_1:5047293-5047312 | Msa1174010:CDS | 50.0% | |
| CTTCTCTACTCGATCCTCGT+CGG | - | chr8_1:5047310-5047329 | None:intergenic | 50.0% | |
| CAGAGTGGCAGTAGCTAGAT+CGG | + | chr8_1:5047465-5047484 | Msa1174010:three_prime_UTR | 50.0% | |
| CTAAAAGCAGTGCATGCACC+TGG | + | chr8_1:5047681-5047700 | Msa1174010:three_prime_UTR | 50.0% | |
| GATGATGCTGAACCTGGTGG+TGG | + | chr8_1:5044847-5044866 | Msa1174010:CDS | 55.0% | |
| !!! | CCCACTTTTTGCCCACAAGC+AGG | - | chr8_1:5045978-5045997 | None:intergenic | 55.0% |
| TGCAGCGTAAAAGGAGGGTG+AGG | + | chr8_1:5046568-5046587 | Msa1174010:CDS | 55.0% | |
| AGCAGTGCATGCACCTGGTT+TGG | + | chr8_1:5047686-5047705 | Msa1174010:three_prime_UTR | 55.0% | |
| !! | GATGCTGAACCTGGTGGTGG+TGG | + | chr8_1:5044850-5044869 | Msa1174010:CDS | 60.0% |
| AGGAGCAGGAGCTGATCGCG+AGG | + | chr8_1:5047420-5047439 | Msa1174010:three_prime_UTR | 65.0% | |
| GGAGCAGGAGCTGATCGCGA+GGG | + | chr8_1:5047421-5047440 | Msa1174010:three_prime_UTR | 65.0% | |
| CAGGAGCTGATCGCGAGGGA+GGG | + | chr8_1:5047425-5047444 | Msa1174010:three_prime_UTR | 65.0% | |
| GCAGGAGCTGATCGCGAGGG+AGG | + | chr8_1:5047424-5047443 | Msa1174010:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 5044537 | 5047730 | 5044537 | ID=Msa1174010;Name=Msa1174010 |
| chr8_1 | mRNA | 5044537 | 5047730 | 5044537 | ID=Msa1174010-mRNA-1;Parent=Msa1174010;Name=Msa1174010-mRNA-1;_AED=0.17;_eAED=0.17;_QI=124|0.75|0.6|1|1|1|5|338|228 |
| chr8_1 | exon | 5044537 | 5044727 | 5044537 | ID=Msa1174010-mRNA-1:exon:1663;Parent=Msa1174010-mRNA-1 |
| chr8_1 | exon | 5044827 | 5044981 | 5044827 | ID=Msa1174010-mRNA-1:exon:1664;Parent=Msa1174010-mRNA-1 |
| chr8_1 | exon | 5045969 | 5046065 | 5045969 | ID=Msa1174010-mRNA-1:exon:1665;Parent=Msa1174010-mRNA-1 |
| chr8_1 | exon | 5046559 | 5046820 | 5046559 | ID=Msa1174010-mRNA-1:exon:1666;Parent=Msa1174010-mRNA-1 |
| chr8_1 | exon | 5047287 | 5047730 | 5047287 | ID=Msa1174010-mRNA-1:exon:1667;Parent=Msa1174010-mRNA-1 |
| chr8_1 | five_prime_UTR | 5044537 | 5044660 | 5044537 | ID=Msa1174010-mRNA-1:five_prime_utr;Parent=Msa1174010-mRNA-1 |
| chr8_1 | CDS | 5044661 | 5044727 | 5044661 | ID=Msa1174010-mRNA-1:cds;Parent=Msa1174010-mRNA-1 |
| chr8_1 | CDS | 5044827 | 5044981 | 5044827 | ID=Msa1174010-mRNA-1:cds;Parent=Msa1174010-mRNA-1 |
| chr8_1 | CDS | 5045969 | 5046065 | 5045969 | ID=Msa1174010-mRNA-1:cds;Parent=Msa1174010-mRNA-1 |
| chr8_1 | CDS | 5046559 | 5046820 | 5046559 | ID=Msa1174010-mRNA-1:cds;Parent=Msa1174010-mRNA-1 |
| chr8_1 | CDS | 5047287 | 5047392 | 5047287 | ID=Msa1174010-mRNA-1:cds;Parent=Msa1174010-mRNA-1 |
| chr8_1 | three_prime_UTR | 5047393 | 5047730 | 5047393 | ID=Msa1174010-mRNA-1:three_prime_utr;Parent=Msa1174010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
