AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0095380


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0095380 MtrunA17_Chr4g0008871 79.167 96 15 1 1 91 1 96 1.57e-49 158
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 20 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTAACTTATTTGGATTAA+AGG 0.134555 1_3:+211008 None:intergenic
TTGCCAAAAGCTAACTTATT+TGG 0.143563 1_3:+211000 None:intergenic
AAATTTACAACAACCGAAAA+AGG 0.234734 1_3:+211587 None:intergenic
AATCCAAATAAGTTAGCTTT+TGG 0.283724 1_3:-211003 Msa0095380:CDS
CAAGGAGTTCAGTTTCTTGC+CGG 0.285437 1_3:-211079 Msa0095380:CDS
CTTTCTCTTTGTTTCATCAA+TGG 0.304765 1_3:-212372 Msa0095380:five_prime_UTR
TCAGAATAAGAATCCTTATC+TGG 0.310991 1_3:-211633 Msa0095380:intron
GGATGTTGTTCCTTTGAATA+AGG 0.311669 1_3:-209116 Msa0095380:CDS
CCTTTGGTACTTTGTTGATC+TGG 0.330932 1_3:+209414 None:intergenic
GTTCAGTTTCTTGCCGGGTT+CGG 0.410478 1_3:-211073 Msa0095380:CDS
TGCAACTTGAGGCATTGATT+AGG 0.431017 1_3:+210943 None:intergenic
ATCTTCTCATTTGCAACTTG+AGG 0.480992 1_3:+210932 None:intergenic
AAGGAGTTCAGTTTCTTGCC+GGG 0.510954 1_3:-211078 Msa0095380:CDS
CTGAACATAAACACCAGATA+AGG 0.511267 1_3:+211620 None:intergenic
GAGAAACCTTGTAACGGAAG+AGG 0.516416 1_3:+212288 None:intergenic
ATAACAGTTGATGACGATGA+AGG 0.530217 1_3:-209489 Msa0095380:intron
GGGACTTTCTTCTACTCTCA+AGG 0.531322 1_3:-211097 Msa0095380:CDS
AAGCTATTGATGACCGAACC+CGG 0.564308 1_3:+211060 None:intergenic
CCAGATCAACAAAGTACCAA+AGG 0.603229 1_3:-209414 Msa0095380:intron
AATTTGGAGAAACCTTGTAA+CGG 0.658112 1_3:+212282 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATATTTAAATATAAA+TGG + chr1_3:212259-212278 None:intergenic 0.0%
!! ATTCATATATAACAATAATT+TGG + chr1_3:209417-209436 None:intergenic 10.0%
!! ATTATTGTTATATATGAATA+TGG - chr1_3:209418-209437 Msa0095380:CDS 10.0%
!! TTATTGTTATATATGAATAT+GGG - chr1_3:209419-209438 Msa0095380:CDS 10.0%
!! AAATAAGAATCAATTATATT+TGG + chr1_3:209816-209835 None:intergenic 10.0%
!!! TATTTTATTAAATTAAGTGT+AGG - chr1_3:210801-210820 Msa0095380:intron 10.0%
!!! ATTTTATTAAATTAAGTGTA+GGG - chr1_3:210983-211002 Msa0095380:CDS 10.0%
!!! TTTTTTTTTTACATAAATTC+AGG + chr1_3:211028-211047 None:intergenic 10.0%
!!! TAGATAAATTTAACTTTTTT+TGG - chr1_3:211125-211144 Msa0095380:intron 10.0%
!!! ATTGATAGTTTTTTTTTTTT+TGG - chr1_3:212338-212357 Msa0095380:five_prime_UTR 10.0%
!!! TGCAATTTTTAATATTTGTT+GGG - chr1_3:209280-209299 Msa0095380:intron 15.0%
!!! AATTCTCTTTTAAGTTTTAA+GGG - chr1_3:210071-210090 Msa0095380:intron 15.0%
!! AACACTTATAAAATATGTTA+TGG + chr1_3:210910-210929 None:intergenic 15.0%
!!! ATAAATTTAACTTTTTTTGG+TGG - chr1_3:211128-211147 Msa0095380:intron 15.0%
!! TGAATATATAATATGTTTAG+AGG + chr1_3:211329-211348 None:intergenic 15.0%
!! TTAATTATTGTTAGCTAATT+GGG + chr1_3:211503-211522 None:intergenic 15.0%
!! ATTAATTATTGTTAGCTAAT+TGG + chr1_3:211504-211523 None:intergenic 15.0%
!!! AAAAAGAGATAAAGTATTAA+TGG + chr1_3:212147-212166 None:intergenic 15.0%
!! AAATTGCAGAAAAAAGAATT+TGG + chr1_3:209268-209287 None:intergenic 20.0%
!!! CTGCAATTTTTAATATTTGT+TGG - chr1_3:209279-209298 Msa0095380:intron 20.0%
!! CAATAATTTGGAAAAGTAAA+AGG + chr1_3:209405-209424 None:intergenic 20.0%
!!! ATTAAGTTGTTTATTCAAAC+AGG - chr1_3:209646-209665 Msa0095380:intron 20.0%
!!! TTAAGTTGTTTATTCAAACA+GGG - chr1_3:209647-209666 Msa0095380:intron 20.0%
!!! GAATTCTCTTTTAAGTTTTA+AGG - chr1_3:210070-210089 Msa0095380:intron 20.0%
!!! TTTGATTTAACTACTTGAAA+TGG - chr1_3:210175-210194 Msa0095380:intron 20.0%
!! TACATAGAATTTCAATTGAA+TGG - chr1_3:210243-210262 Msa0095380:intron 20.0%
!!! AATTTTGTGTTTTTTCATGA+AGG - chr1_3:210413-210432 Msa0095380:intron 20.0%
!!! ATTTTGTGTTTTTTCATGAA+GGG - chr1_3:210414-210433 Msa0095380:intron 20.0%
!! TAACAATAATTAATTGTCGT+TGG - chr1_3:211510-211529 Msa0095380:intron 20.0%
!! AACAATAATTAATTGTCGTT+GGG - chr1_3:211511-211530 Msa0095380:intron 20.0%
!! AAATCACATCTAATATATCA+AGG - chr1_3:211602-211621 Msa0095380:five_prime_UTR 20.0%
!!! TTTTTATTTCTTGTGTTACT+AGG - chr1_3:211829-211848 Msa0095380:intron 20.0%
!! CAAAAAATTGCATATGTAAT+TGG + chr1_3:211900-211919 None:intergenic 20.0%
!! AAACTAAATAATGTCAACAT+TGG - chr1_3:211936-211955 Msa0095380:intron 20.0%
!!! TGGTAATTTAGAATTAGATT+AGG - chr1_3:212358-212377 Msa0095380:five_prime_UTR 20.0%
!!! TGTTGATTTTGTTTACAAAG+TGG + chr1_3:209188-209207 None:intergenic 25.0%
!! TATTCTTCAATTTTGTTCCT+AGG - chr1_3:209344-209363 Msa0095380:intron 25.0%
! TAGGTATAAAACTCTCAAAA+GGG - chr1_3:209363-209382 Msa0095380:intron 25.0%
!! GCAATTTTCATAAGCTATAT+TGG + chr1_3:209517-209536 None:intergenic 25.0%
! CAGCTTATAACATTACAAAA+GGG + chr1_3:209623-209642 None:intergenic 25.0%
! AAATTTACAACAACCGAAAA+AGG + chr1_3:209947-209966 None:intergenic 25.0%
!! TGAATTAGCATTTTCAACTA+TGG - chr1_3:209967-209986 Msa0095380:intron 25.0%
!!! TAAGTGTAATTCTGAAACAA+GGG + chr1_3:210030-210049 None:intergenic 25.0%
!!! ATAAGTGTAATTCTGAAACA+AGG + chr1_3:210031-210050 None:intergenic 25.0%
! ATCTATCGAATTCAGAATTT+CGG - chr1_3:210139-210158 Msa0095380:intron 25.0%
! AACTACTTGAAATGGAAATT+TGG - chr1_3:210183-210202 Msa0095380:intron 25.0%
! TAGAATTTCAATTGAATGGT+TGG - chr1_3:210247-210266 Msa0095380:intron 25.0%
! CTTCAGTGAAATTCATAAAA+AGG + chr1_3:210284-210303 None:intergenic 25.0%
!!! CGATATGTTTTTCTTTTTCA+AGG - chr1_3:210341-210360 Msa0095380:intron 25.0%
!! AATTTAAAAATTTGCTCACG+TGG - chr1_3:210378-210397 Msa0095380:intron 25.0%
! AGCTAACTTATTTGGATTAA+AGG + chr1_3:210526-210545 None:intergenic 25.0%
!!! AATCCAAATAAGTTAGCTTT+TGG - chr1_3:210528-210547 Msa0095380:intron 25.0%
! AGTACCAATAAGAATCAAAA+GGG + chr1_3:210648-210667 None:intergenic 25.0%
! TAGTACCAATAAGAATCAAA+AGG + chr1_3:210649-210668 None:intergenic 25.0%
!!! TTCTTATTGGTACTACTTTT+TGG - chr1_3:210654-210673 Msa0095380:intron 25.0%
! ATCAAGACTATAGAAAGAAA+TGG + chr1_3:210727-210746 None:intergenic 25.0%
! ATAGTTAGTACAGAAAACTT+AGG + chr1_3:210784-210803 None:intergenic 25.0%
! TCAGGCTATAAAATATGTTA+TGG + chr1_3:211010-211029 None:intergenic 25.0%
!!! AATTTAACTTTTTTTGGTGG+TGG - chr1_3:211131-211150 Msa0095380:intron 25.0%
! TATAATATGTTTAGAGGCTA+AGG + chr1_3:211323-211342 None:intergenic 25.0%
! ACAATAATTAATTGTCGTTG+GGG - chr1_3:211512-211531 Msa0095380:intron 25.0%
!!! GAAGAAGAGATTTTTTTTGA+AGG + chr1_3:211798-211817 None:intergenic 25.0%
!! ATTTTATCAGGAACATATCA+CGG - chr1_3:211860-211879 Msa0095380:intron 25.0%
! AAGTATTAATGGTATACCTT+TGG + chr1_3:212136-212155 None:intergenic 25.0%
! AAACGTATAAACCTGAAATT+AGG + chr1_3:212388-212407 None:intergenic 25.0%
!!! AGGTTTATACGTTTTTGAAA+AGG - chr1_3:212394-212413 Msa0095380:five_prime_UTR 25.0%
TGAACAAAAAGCAAACTATG+TGG - chr1_3:209114-209133 Msa0095380:CDS 30.0%
GAACAAAAAGCAAACTATGT+GGG - chr1_3:209115-209134 Msa0095380:CDS 30.0%
! CTTTCTCTTTGTTTCATCAA+TGG - chr1_3:209159-209178 Msa0095380:intron 30.0%
AATTTGGAGAAACCTTGTAA+CGG + chr1_3:209252-209271 None:intergenic 30.0%
!! CTTTTGAGAGTTTTATACCT+AGG + chr1_3:209364-209383 None:intergenic 30.0%
CTAGGTATAAAACTCTCAAA+AGG - chr1_3:209362-209381 Msa0095380:intron 30.0%
! GAATATGGGTTTGTTTGAAT+TGG - chr1_3:209433-209452 Msa0095380:CDS 30.0%
GCAGCTTATAACATTACAAA+AGG + chr1_3:209624-209643 None:intergenic 30.0%
TGATCCTACTCAATCAATAT+TGG + chr1_3:209673-209692 None:intergenic 30.0%
TCAGAATAAGAATCCTTATC+TGG - chr1_3:209898-209917 Msa0095380:intron 30.0%
TTTCTGCAAAATTATCGCTT+AGG - chr1_3:210094-210113 Msa0095380:intron 30.0%
TCTATCGAATTCAGAATTTC+GGG - chr1_3:210140-210159 Msa0095380:intron 30.0%
CTTGAAATGGAAATTTGGAA+TGG - chr1_3:210188-210207 Msa0095380:intron 30.0%
GTAAAAAAAAATCCAACTCC+CGG + chr1_3:210226-210245 None:intergenic 30.0%
TTGCCAAAAGCTAACTTATT+TGG + chr1_3:210534-210553 None:intergenic 30.0%
!!! TTTGGCAAAAGTTTTGAAAG+AGG - chr1_3:210546-210565 Msa0095380:intron 30.0%
GACCTATTATATTTGCATCT+AGG - chr1_3:210756-210775 Msa0095380:intron 30.0%
AGCCTAGATGCAAATATAAT+AGG + chr1_3:210761-210780 None:intergenic 30.0%
! TTATAAGTGTCGTCAAATAG+CGG - chr1_3:210827-210846 Msa0095380:intron 30.0%
! TTATAAGTGTCGTCAAATAG+CGG - chr1_3:210827-210846 Msa0095380:intron 30.0%
CCAAAAAAAGTCAATATGCA+AGG + chr1_3:211175-211194 None:intergenic 30.0%
!!! CCTTGCATATTGACTTTTTT+TGG - chr1_3:211172-211191 Msa0095380:intron 30.0%
!!! TGCATATTGACTTTTTTTGG+TGG - chr1_3:211175-211194 Msa0095380:intron 30.0%
!!! ATATTGACTTTTTTTGGTGG+TGG - chr1_3:211178-211197 Msa0095380:intron 30.0%
GACAATGCATAAAATATGCA+AGG + chr1_3:211238-211257 None:intergenic 30.0%
!!! ATGGCTAAATTTTAGGGTTA+GGG + chr1_3:211642-211661 None:intergenic 30.0%
! AGAGAGATGGCTAAATTTTA+GGG + chr1_3:211648-211667 None:intergenic 30.0%
! AAGAGAGATGGCTAAATTTT+AGG + chr1_3:211649-211668 None:intergenic 30.0%
ATTCTGAGTAATAAGAGAGA+TGG + chr1_3:211661-211680 None:intergenic 30.0%
! TAGGTATTCCTCATTTTATC+AGG - chr1_3:211848-211867 Msa0095380:intron 30.0%
GATATGTTCCTGATAAAATG+AGG + chr1_3:211859-211878 None:intergenic 30.0%
!! AAAAAGCGCAGTGCAAATTT+TGG + chr1_3:209216-209235 None:intergenic 35.0%
CTGAACATAAACACCAGATA+AGG + chr1_3:209914-209933 None:intergenic 35.0%
AAGAAGTCTCACTTCATGAA+TGG - chr1_3:210301-210320 Msa0095380:intron 35.0%
TCATGAATGGTTGAGGAATA+AGG - chr1_3:210314-210333 Msa0095380:intron 35.0%
ATCTTCTCATTTGCAACTTG+AGG + chr1_3:210602-210621 None:intergenic 35.0%
!! CGAACCCTTTTGATTCTTAT+TGG - chr1_3:210641-210660 Msa0095380:intron 35.0%
!!! TAACTTTTTTTGGTGGTGGT+CGG - chr1_3:211135-211154 Msa0095380:intron 35.0%
AAAAGTCAATATGCAAGGTC+CGG + chr1_3:211170-211189 None:intergenic 35.0%
ATGCAAGGTCAATATGCAAA+AGG + chr1_3:211223-211242 None:intergenic 35.0%
!! GAGATATTTGGGACATTTTG+AGG + chr1_3:211392-211411 None:intergenic 35.0%
CTATTGTTCGTTACTTGTGT+CGG - chr1_3:211425-211444 Msa0095380:intron 35.0%
TTGTTAGCTAATTGGGAATG+AGG + chr1_3:211496-211515 None:intergenic 35.0%
! GTGTGGGAGAACAATTTTAT+AGG - chr1_3:211554-211573 Msa0095380:exon 35.0%
ACATCTAATATATCAAGGCC+CGG - chr1_3:211607-211626 Msa0095380:five_prime_UTR 35.0%
!!! TGGCTAAATTTTAGGGTTAG+GGG + chr1_3:211641-211660 None:intergenic 35.0%
!!! GATGGCTAAATTTTAGGGTT+AGG + chr1_3:211643-211662 None:intergenic 35.0%
!! TTTTGAAGGATCGTGAAGAA+GGG + chr1_3:211784-211803 None:intergenic 35.0%
!! TTTTTGAAGGATCGTGAAGA+AGG + chr1_3:211785-211804 None:intergenic 35.0%
!! ATAACAGTTGATGACGATGA+AGG - chr1_3:212042-212061 Msa0095380:intron 35.0%
GGATGTTGTTCCTTTGAATA+AGG - chr1_3:212415-212434 Msa0095380:five_prime_UTR 35.0%
! GATTTTCCTCTTCCGTTACA+AGG - chr1_3:209237-209256 Msa0095380:intron 40.0%
! AGGGCCAATATTGATTGAGT+AGG - chr1_3:209666-209685 Msa0095380:intron 40.0%
GTACACAGCAATGCAATTTC+AGG - chr1_3:209838-209857 Msa0095380:intron 40.0%
! AGCAATGCAATTTCAGGTGA+AGG - chr1_3:209844-209863 Msa0095380:intron 40.0%
GGAATGGTTTATAACTCCTC+CGG - chr1_3:210204-210223 Msa0095380:intron 40.0%
GAATGGTTTATAACTCCTCC+GGG - chr1_3:210205-210224 Msa0095380:intron 40.0%
AAAAAAAATCCAACTCCCGG+AGG + chr1_3:210223-210242 None:intergenic 40.0%
TCTCACTTCATGAATGGTTG+AGG - chr1_3:210307-210326 Msa0095380:intron 40.0%
! AAATTTGCTCACGTGGTTCA+TGG - chr1_3:210385-210404 Msa0095380:intron 40.0%
!! TGCAACTTGAGGCATTGATT+AGG + chr1_3:210591-210610 None:intergenic 40.0%
AATCAAAAGGGTTCGAGCAA+AGG + chr1_3:210636-210655 None:intergenic 40.0%
!!! AACTTTTTTTGGTGGTGGTC+GGG - chr1_3:211136-211155 Msa0095380:intron 40.0%
AAAGTCAATATGCAAGGTCC+GGG + chr1_3:211169-211188 None:intergenic 40.0%
AGGTCAATATGCAAAAGGTC+CGG + chr1_3:211218-211237 None:intergenic 40.0%
! TGAGCTTAACTCAGTTGGTA+TGG + chr1_3:211260-211279 None:intergenic 40.0%
TACCAACTGAGTTAAGCTCA+CGG - chr1_3:211260-211279 Msa0095380:intron 40.0%
AATGTCCCAAATATCTCCCA+CGG - chr1_3:211395-211414 Msa0095380:intron 40.0%
GAACAATAGTTAACTGCCGT+GGG + chr1_3:211414-211433 None:intergenic 40.0%
! ATCGTTCGCTACTTGTTGAA+CGG - chr1_3:211460-211479 Msa0095380:intron 40.0%
GGGATATTTGAGTCATTTCG+AGG - chr1_3:211532-211551 Msa0095380:intron 40.0%
ATTTGAGTCATTTCGAGGTG+TGG - chr1_3:211537-211556 Msa0095380:CDS 40.0%
TTTGAGTCATTTCGAGGTGT+GGG - chr1_3:211538-211557 Msa0095380:CDS 40.0%
CATCTAATATATCAAGGCCC+GGG - chr1_3:211608-211627 Msa0095380:five_prime_UTR 40.0%
!!! ATTTTAGGGTTAGGGGCTAT+GGG + chr1_3:211634-211653 None:intergenic 40.0%
!!! AATTTTAGGGTTAGGGGCTA+TGG + chr1_3:211635-211654 None:intergenic 40.0%
AGTGACTATGTGTCCAATTG+TGG - chr1_3:211994-212013 Msa0095380:intron 40.0%
GTGACTATGTGTCCAATTGT+GGG - chr1_3:211995-212014 Msa0095380:intron 40.0%
! GAAACTGACTTACCCACAAT+TGG + chr1_3:212010-212029 None:intergenic 40.0%
CCTTTGGTACTTTGTTGATC+TGG + chr1_3:212120-212139 None:intergenic 40.0%
! CCAGATCAACAAAGTACCAA+AGG - chr1_3:212117-212136 Msa0095380:intron 40.0%
GATTAGGCTTGCCTAATTTC+AGG - chr1_3:212374-212393 Msa0095380:five_prime_UTR 40.0%
! GAGAAACCTTGTAACGGAAG+AGG + chr1_3:209246-209265 None:intergenic 45.0%
TTTATAACTCCTCCGGGAGT+TGG - chr1_3:210211-210230 Msa0095380:intron 45.0%
GGGACTTTCTTCTACTCTCA+AGG - chr1_3:210434-210453 Msa0095380:intron 45.0%
CAAGGAGTTCAGTTTCTTGC+CGG - chr1_3:210452-210471 Msa0095380:intron 45.0%
AAGGAGTTCAGTTTCTTGCC+GGG - chr1_3:210453-210472 Msa0095380:intron 45.0%
! AAGCTATTGATGACCGAACC+CGG + chr1_3:210474-210493 None:intergenic 45.0%
!!! ACTTTTTTTGGTGGTGGTCG+GGG - chr1_3:211137-211156 Msa0095380:intron 45.0%
!!! TGACTTTTTTTGGTGGTGGC+CGG - chr1_3:211182-211201 Msa0095380:intron 45.0%
GTCAATATGCAAAAGGTCCG+GGG + chr1_3:211216-211235 None:intergenic 45.0%
GGTCAATATGCAAAAGGTCC+GGG + chr1_3:211217-211236 None:intergenic 45.0%
ACCAACTGAGTTAAGCTCAC+GGG - chr1_3:211261-211280 Msa0095380:intron 45.0%
AACTGCCGTGGGAGATATTT+GGG + chr1_3:211403-211422 None:intergenic 45.0%
TAACTGCCGTGGGAGATATT+TGG + chr1_3:211404-211423 None:intergenic 45.0%
CGAACAATAGTTAACTGCCG+TGG + chr1_3:211415-211434 None:intergenic 45.0%
!! TAATTTAATAAAATATGTTA+TGG + chr1_3:210853-210872 None:intergenic 5.0%
!! AATTATGAAAATAATTTATA+TGG + chr1_3:212217-212236 None:intergenic 5.0%
! CAGCTGATGCGAGCCTTTTT+CGG - chr1_3:209931-209950 Msa0095380:intron 50.0%
GTTCAGTTTCTTGCCGGGTT+CGG - chr1_3:210458-210477 Msa0095380:intron 50.0%
!!! GACTTTTTTTGGTGGTGGCC+GGG - chr1_3:211183-211202 Msa0095380:intron 50.0%
!!! ACTTTTTTTGGTGGTGGCCG+GGG - chr1_3:211184-211203 Msa0095380:intron 50.0%
CCAACTGAGTTAAGCTCACG+GGG - chr1_3:211262-211281 Msa0095380:intron 50.0%
CCCCGTGAGCTTAACTCAGT+TGG + chr1_3:211265-211284 None:intergenic 55.0%
TGGTGGTCGGGGTTCGAACC+CGG - chr1_3:211148-211167 Msa0095380:intron 65.0%
AAGGTCCGGGGTTCGAACCC+CGG + chr1_3:211204-211223 None:intergenic 65.0%
AGGGTTAGGGGCTATGGGCC+CGG + chr1_3:211629-211648 None:intergenic 65.0%
GGGTTAGGGGCTATGGGCCC+GGG + chr1_3:211628-211647 None:intergenic 70.0%
GGTGGCCGGGGTTCGAACCC+CGG - chr1_3:211196-211215 Msa0095380:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 209108 212445 209108 ID=Msa0095380;Name=Msa0095380
chr1_3 mRNA 209108 212445 209108 ID=Msa0095380-mRNA-1;Parent=Msa0095380;Name=Msa0095380-mRNA-1;_AED=0.22;_eAED=0.22;_QI=235|0.75|0.8|1|0.75|0.6|5|0|120
chr1_3 exon 209108 209157 209108 ID=Msa0095380-mRNA-1:exon:22;Parent=Msa0095380-mRNA-1
chr1_3 exon 209415 209504 209415 ID=Msa0095380-mRNA-1:exon:21;Parent=Msa0095380-mRNA-1
chr1_3 exon 210929 211118 210929 ID=Msa0095380-mRNA-1:exon:20;Parent=Msa0095380-mRNA-1
chr1_3 exon 211535 211651 211535 ID=Msa0095380-mRNA-1:exon:19;Parent=Msa0095380-mRNA-1
chr1_3 exon 212295 212445 212295 ID=Msa0095380-mRNA-1:exon:18;Parent=Msa0095380-mRNA-1
chr1_3 five_prime_UTR 212295 212445 212295 ID=Msa0095380-mRNA-1:five_prime_utr;Parent=Msa0095380-mRNA-1
chr1_3 five_prime_UTR 211568 211651 211568 ID=Msa0095380-mRNA-1:five_prime_utr;Parent=Msa0095380-mRNA-1
chr1_3 CDS 211535 211567 211535 ID=Msa0095380-mRNA-1:cds;Parent=Msa0095380-mRNA-1
chr1_3 CDS 210929 211118 210929 ID=Msa0095380-mRNA-1:cds;Parent=Msa0095380-mRNA-1
chr1_3 CDS 209415 209504 209415 ID=Msa0095380-mRNA-1:cds;Parent=Msa0095380-mRNA-1
chr1_3 CDS 209108 209157 209108 ID=Msa0095380-mRNA-1:cds;Parent=Msa0095380-mRNA-1
Gene Sequence

>Msa0095380

ATGGCGCTTTATGCAACTGCGTTATCGTTCAACGGACTTTCTTCTACTCTCAAGGAGTTCAGTTTCTTGCCGGGTTCGGTCATCAATAGCTTTCACAAGCGACATGATGTTTGTCTGCAATCCTTTAATCCAAATAAGTTAGCTTTTGGCAAAAGTTTTGAAAGAGGAGACGAACTGTGTTTGTTGCCTAATCAATGCCTCAAGTTGCAAATGAGAAGATTCATTGATGACGATGAAGGTGAAGATGACATTGAAGATGAAGATCTTATAATTCAATTGATCATGAATCATCCAGATCAACAAAGTACCAAAGGTTTATACGTTTTTGAAAAGGATGTTGTTCCTTTGAATAAGGAAGTGTAA

Protein sequence

>Msa0095380

MALYATALSFNGLSSTLKEFSFLPGSVINSFHKRHDVCLQSFNPNKLAFGKSFERGDELCLLPNQCLKLQMRRFIDDDEGEDDIEDEDLIIQLIMNHPDQQSTKGLYVFEKDVVPLNKEV*