Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0137040 | XP_013470130.1 | 94.545 | 220 | 8 | 1 | 1 | 220 | 1 | 216 | 1.61e-138 | 396 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0137040 | G8A288 | 94.545 | 220 | 8 | 1 | 1 | 220 | 1 | 216 | 7.69e-139 | 396 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000490 | Msa0137040 | -0.852202 | 5.389913e-61 | -8.615850e-47 |
Msa0005350 | Msa0137040 | 0.821721 | 3.473739e-53 | -8.615850e-47 |
Msa0006290 | Msa0137040 | 0.811242 | 7.722612e-51 | -8.615850e-47 |
Msa0024680 | Msa0137040 | 0.807073 | 6.039792e-50 | -8.615850e-47 |
Msa0027580 | Msa0137040 | 0.803382 | 3.580753e-49 | -8.615850e-47 |
Msa0030380 | Msa0137040 | 0.831689 | 1.447577e-55 | -8.615850e-47 |
Msa0041970 | Msa0137040 | 0.812228 | 4.712562e-51 | -8.615850e-47 |
Msa0043170 | Msa0137040 | 0.854555 | 1.138769e-61 | -8.615850e-47 |
Msa0047980 | Msa0137040 | 0.812339 | 4.455803e-51 | -8.615850e-47 |
Msa0049400 | Msa0137040 | -0.807333 | 5.321253e-50 | -8.615850e-47 |
Msa0053900 | Msa0137040 | 0.832795 | 7.711132e-56 | -8.615850e-47 |
Msa0057140 | Msa0137040 | 0.829432 | 5.163529e-55 | -8.615850e-47 |
Msa0068760 | Msa0137040 | 0.808555 | 2.924121e-50 | -8.615850e-47 |
Msa0069310 | Msa0137040 | 0.821331 | 4.274317e-53 | -8.615850e-47 |
Msa0071240 | Msa0137040 | 0.803045 | 4.203486e-49 | -8.615850e-47 |
Msa0075340 | Msa0137040 | 0.801712 | 7.912391e-49 | -8.615850e-47 |
Msa0076000 | Msa0137040 | 0.809523 | 1.814445e-50 | -8.615850e-47 |
Msa0081230 | Msa0137040 | 0.821524 | 3.856429e-53 | -8.615850e-47 |
Msa0087290 | Msa0137040 | 0.803415 | 3.524917e-49 | -8.615850e-47 |
Msa0090030 | Msa0137040 | 0.812736 | 3.649153e-51 | -8.615850e-47 |
Msa0091570 | Msa0137040 | 0.810132 | 1.341943e-50 | -8.615850e-47 |
Msa0094920 | Msa0137040 | 0.814096 | 1.833343e-51 | -8.615850e-47 |
Msa0095010 | Msa0137040 | 0.829085 | 6.269538e-55 | -8.615850e-47 |
Msa0095380 | Msa0137040 | 0.847884 | 8.719277e-60 | -8.615850e-47 |
Msa0097990 | Msa0137040 | 0.807618 | 4.629050e-50 | -8.615850e-47 |
Msa0099730 | Msa0137040 | 0.814868 | 1.237142e-51 | -8.615850e-47 |
Msa0100300 | Msa0137040 | 0.806687 | 7.288458e-50 | -8.615850e-47 |
Msa0113160 | Msa0137040 | 0.808536 | 2.951875e-50 | -8.615850e-47 |
Msa0120340 | Msa0137040 | 0.808868 | 2.506934e-50 | -8.615850e-47 |
Msa0131450 | Msa0137040 | 0.811618 | 6.397863e-51 | -8.615850e-47 |
Msa0136390 | Msa0137040 | 0.841596 | 4.316515e-58 | -8.615850e-47 |
Msa0137040 | Msa0140520 | -0.815334 | 9.749957e-52 | -8.615850e-47 |
Msa0137040 | Msa0143080 | 0.844167 | 8.938900e-59 | -8.615850e-47 |
Msa0137040 | Msa0145950 | 0.813051 | 3.112221e-51 | -8.615850e-47 |
Msa0137040 | Msa0148120 | 0.803984 | 2.685237e-49 | -8.615850e-47 |
Msa0137040 | Msa0148340 | 0.801519 | 8.667045e-49 | -8.615850e-47 |
Msa0137040 | Msa0148360 | 0.827087 | 1.899071e-54 | -8.615850e-47 |
Msa0137040 | Msa0154770 | 0.821158 | 4.684037e-53 | -8.615850e-47 |
Msa0137040 | Msa0156650 | -0.802566 | 5.278716e-49 | -8.615850e-47 |
Msa0137040 | Msa0162770 | -0.804583 | 2.014589e-49 | -8.615850e-47 |
Msa0137040 | Msa0168640 | -0.824336 | 8.529663e-54 | -8.615850e-47 |
Msa0137040 | Msa0172350 | 0.832374 | 9.804699e-56 | -8.615850e-47 |
Msa0137040 | Msa0173740 | 0.835634 | 1.496559e-56 | -8.615850e-47 |
Msa0137040 | Msa0173820 | 0.832120 | 1.132854e-55 | -8.615850e-47 |
Msa0137040 | Msa0177270 | 0.810917 | 9.083273e-51 | -8.615850e-47 |
Msa0137040 | Msa0178990 | 0.850387 | 1.755238e-60 | -8.615850e-47 |
Msa0137040 | Msa0182280 | 0.874999 | 4.351851e-68 | -8.615850e-47 |
Msa0137040 | Msa0183460 | 0.829339 | 5.439784e-55 | -8.615850e-47 |
Msa0137040 | Msa0183590 | 0.808145 | 3.575663e-50 | -8.615850e-47 |
Msa0137040 | Msa0188630 | 0.804262 | 2.350301e-49 | -8.615850e-47 |
Msa0137040 | Msa0188680 | -0.814570 | 1.440287e-51 | -8.615850e-47 |
Msa0137040 | Msa0194970 | 0.830268 | 3.231327e-55 | -8.615850e-47 |
Msa0137040 | Msa0199690 | 0.838558 | 2.677535e-57 | -8.615850e-47 |
Msa0137040 | Msa0208810 | 0.800493 | 1.404775e-48 | -8.615850e-47 |
Msa0137040 | Msa0211650 | 0.810882 | 9.241115e-51 | -8.615850e-47 |
Msa0137040 | Msa0223100 | 0.800210 | 1.603713e-48 | -8.615850e-47 |
Msa0137040 | Msa0223290 | 0.822703 | 2.055990e-53 | -8.615850e-47 |
Msa0137040 | Msa0223380 | 0.808264 | 3.373186e-50 | -8.615850e-47 |
Msa0137040 | Msa0224730 | 0.809152 | 2.179076e-50 | -8.615850e-47 |
Msa0137040 | Msa0226470 | 0.803814 | 2.912256e-49 | -8.615850e-47 |
Msa0137040 | Msa0227400 | 0.825040 | 5.821987e-54 | -8.615850e-47 |
Msa0137040 | Msa0231880 | 0.808478 | 3.036517e-50 | -8.615850e-47 |
Msa0137040 | Msa0236270 | 0.811051 | 8.495502e-51 | -8.615850e-47 |
Msa0137040 | Msa0236440 | 0.817941 | 2.539333e-52 | -8.615850e-47 |
Msa0137040 | Msa0236980 | 0.853059 | 3.068785e-61 | -8.615850e-47 |
Msa0137040 | Msa0242680 | 0.813361 | 2.661110e-51 | -8.615850e-47 |
Msa0137040 | Msa0244270 | 0.811955 | 5.403557e-51 | -8.615850e-47 |
Msa0137040 | Msa0248980 | 0.804093 | 2.549057e-49 | -8.615850e-47 |
Msa0137040 | Msa0259560 | 0.813071 | 3.080712e-51 | -8.615850e-47 |
Msa0137040 | Msa0260210 | 0.807323 | 5.347487e-50 | -8.615850e-47 |
Msa0137040 | Msa0266210 | 0.805933 | 1.050605e-49 | -8.615850e-47 |
Msa0137040 | Msa0267760 | 0.823487 | 1.348902e-53 | -8.615850e-47 |
Msa0137040 | Msa0270220 | -0.824760 | 6.778815e-54 | -8.615850e-47 |
Msa0137040 | Msa0275400 | -0.801697 | 7.969092e-49 | -8.615850e-47 |
Msa0137040 | Msa0280430 | 0.840232 | 9.840668e-58 | -8.615850e-47 |
Msa0137040 | Msa0280490 | 0.826305 | 2.918799e-54 | -8.615850e-47 |
Msa0137040 | Msa0288240 | 0.803651 | 3.149369e-49 | -8.615850e-47 |
Msa0137040 | Msa0291520 | 0.803710 | 3.061533e-49 | -8.615850e-47 |
Msa0137040 | Msa0302650 | 0.822163 | 2.743461e-53 | -8.615850e-47 |
Msa0137040 | Msa0304290 | 0.820898 | 5.378187e-53 | -8.615850e-47 |
Msa0137040 | Msa0304330 | 0.824512 | 7.755330e-54 | -8.615850e-47 |
Msa0137040 | Msa0305890 | 0.817032 | 4.069692e-52 | -8.615850e-47 |
Msa0137040 | Msa0307830 | -0.824494 | 7.829794e-54 | -8.615850e-47 |
Msa0137040 | Msa0308220 | 0.808352 | 3.231309e-50 | -8.615850e-47 |
Msa0137040 | Msa0310410 | 0.800783 | 1.225747e-48 | -8.615850e-47 |
Msa0137040 | Msa0320100 | 0.826946 | 2.051618e-54 | -8.615850e-47 |
Msa0137040 | Msa0326670 | 0.823201 | 1.573715e-53 | -8.615850e-47 |
Msa0137040 | Msa0328210 | 0.861454 | 1.014526e-63 | -8.615850e-47 |
Msa0137040 | Msa0337650 | 0.804216 | 2.402334e-49 | -8.615850e-47 |
Msa0137040 | Msa0340810 | 0.817041 | 4.049854e-52 | -8.615850e-47 |
Msa0137040 | Msa0347360 | 0.837232 | 5.869721e-57 | -8.615850e-47 |
Msa0137040 | Msa0355270 | 0.808192 | 3.495204e-50 | -8.615850e-47 |
Msa0137040 | Msa0360990 | 0.809417 | 1.911955e-50 | -8.615850e-47 |
Msa0137040 | Msa0369220 | 0.817487 | 3.214651e-52 | -8.615850e-47 |
Msa0137040 | Msa0369570 | 0.807021 | 6.194864e-50 | -8.615850e-47 |
Msa0137040 | Msa0372670 | 0.802040 | 6.774942e-49 | -8.615850e-47 |
Msa0137040 | Msa0376690 | 0.810740 | 9.920543e-51 | -8.615850e-47 |
Msa0137040 | Msa0377530 | 0.815826 | 7.576814e-52 | -8.615850e-47 |
Msa0137040 | Msa0381700 | 0.802895 | 4.515243e-49 | -8.615850e-47 |
Msa0137040 | Msa0392070 | 0.814194 | 1.744046e-51 | -8.615850e-47 |
Msa0137040 | Msa0393710 | 0.805454 | 1.324669e-49 | -8.615850e-47 |
Msa0137040 | Msa0393950 | 0.800658 | 1.299952e-48 | -8.615850e-47 |
Msa0137040 | Msa0394400 | 0.809249 | 2.077807e-50 | -8.615850e-47 |
Msa0137040 | Msa0402330 | 0.816116 | 6.526625e-52 | -8.615850e-47 |
Msa0137040 | Msa0404030 | 0.805378 | 1.374274e-49 | -8.615850e-47 |
Msa0137040 | Msa0419640 | -0.834896 | 2.299021e-56 | -8.615850e-47 |
Msa0137040 | Msa0420000 | 0.824554 | 7.580261e-54 | -8.615850e-47 |
Msa0137040 | Msa0421600 | 0.800992 | 1.110810e-48 | -8.615850e-47 |
Msa0137040 | Msa0425940 | 0.801687 | 8.004734e-49 | -8.615850e-47 |
Msa0137040 | Msa0426810 | 0.816493 | 5.376046e-52 | -8.615850e-47 |
Msa0137040 | Msa0429290 | 0.801134 | 1.038977e-48 | -8.615850e-47 |
Msa0137040 | Msa0436280 | -0.821579 | 3.745658e-53 | -8.615850e-47 |
Msa0137040 | Msa0446580 | 0.808348 | 3.237808e-50 | -8.615850e-47 |
Msa0137040 | Msa0453230 | 0.801914 | 7.190111e-49 | -8.615850e-47 |
Msa0137040 | Msa0460930 | 0.807852 | 4.129123e-50 | -8.615850e-47 |
Msa0137040 | Msa0463500 | 0.802485 | 5.485476e-49 | -8.615850e-47 |
Msa0137040 | Msa0464900 | 0.803874 | 2.830137e-49 | -8.615850e-47 |
Msa0137040 | Msa0465550 | 0.800843 | 1.191758e-48 | -8.615850e-47 |
Msa0137040 | Msa0469910 | -0.833147 | 6.303423e-56 | -8.615850e-47 |
Msa0137040 | Msa0473240 | 0.807583 | 4.707891e-50 | -8.615850e-47 |
Msa0137040 | Msa0482680 | 0.835414 | 1.701873e-56 | -8.615850e-47 |
Msa0137040 | Msa0485120 | 0.820956 | 5.214874e-53 | -8.615850e-47 |
Msa0137040 | Msa0489610 | 0.803337 | 3.657936e-49 | -8.615850e-47 |
Msa0137040 | Msa0493920 | 0.811094 | 8.311655e-51 | -8.615850e-47 |
Msa0137040 | Msa0505060 | 0.803804 | 2.927008e-49 | -8.615850e-47 |
Msa0137040 | Msa0508870 | 0.807813 | 4.208724e-50 | -8.615850e-47 |
Msa0137040 | Msa0513440 | 0.822721 | 2.035969e-53 | -8.615850e-47 |
Msa0137040 | Msa0517490 | 0.812223 | 4.722404e-51 | -8.615850e-47 |
Msa0137040 | Msa0519220 | 0.806815 | 6.848218e-50 | -8.615850e-47 |
Msa0137040 | Msa0520320 | 0.814513 | 1.482960e-51 | -8.615850e-47 |
Msa0137040 | Msa0526710 | 0.814245 | 1.699390e-51 | -8.615850e-47 |
Msa0137040 | Msa0532330 | 0.806154 | 9.440030e-50 | -8.615850e-47 |
Msa0137040 | Msa0534410 | 0.808231 | 3.428103e-50 | -8.615850e-47 |
Msa0137040 | Msa0534790 | 0.807322 | 5.348841e-50 | -8.615850e-47 |
Msa0137040 | Msa0535030 | 0.837181 | 6.047799e-57 | -8.615850e-47 |
Msa0137040 | Msa0535060 | 0.832086 | 1.154939e-55 | -8.615850e-47 |
Msa0137040 | Msa0542160 | 0.803481 | 3.415713e-49 | -8.615850e-47 |
Msa0137040 | Msa0546360 | 0.805254 | 1.458905e-49 | -8.615850e-47 |
Msa0137040 | Msa0547400 | 0.816205 | 6.233855e-52 | -8.615850e-47 |
Msa0137040 | Msa0553220 | -0.814593 | 1.423743e-51 | -8.615850e-47 |
Msa0137040 | Msa0558840 | 0.804240 | 2.375726e-49 | -8.615850e-47 |
Msa0137040 | Msa0560470 | 0.828478 | 8.793371e-55 | -8.615850e-47 |
Msa0137040 | Msa0562300 | -0.816287 | 5.977829e-52 | -8.615850e-47 |
Msa0137040 | Msa0564930 | 0.806304 | 8.779314e-50 | -8.615850e-47 |
Msa0137040 | Msa0568820 | 0.818144 | 2.284964e-52 | -8.615850e-47 |
Msa0137040 | Msa0571700 | 0.812305 | 4.533600e-51 | -8.615850e-47 |
Msa0137040 | Msa0577220 | 0.815358 | 9.630465e-52 | -8.615850e-47 |
Msa0137040 | Msa0585900 | 0.834322 | 3.204440e-56 | -8.615850e-47 |
Msa0137040 | Msa0590650 | 0.810231 | 1.277756e-50 | -8.615850e-47 |
Msa0137040 | Msa0590680 | 0.843747 | 1.158826e-58 | -8.615850e-47 |
Msa0137040 | Msa0591060 | 0.848863 | 4.671720e-60 | -8.615850e-47 |
Msa0137040 | Msa0591770 | 0.850497 | 1.634006e-60 | -8.615850e-47 |
Msa0137040 | Msa0600610 | 0.803740 | 3.017570e-49 | -8.615850e-47 |
Msa0137040 | Msa0602120 | 0.809334 | 1.992111e-50 | -8.615850e-47 |
Msa0137040 | Msa0607510 | 0.821206 | 4.566359e-53 | -8.615850e-47 |
Msa0137040 | Msa0609970 | 0.805388 | 1.367421e-49 | -8.615850e-47 |
Msa0137040 | Msa0618010 | 0.833200 | 6.111880e-56 | -8.615850e-47 |
Msa0137040 | Msa0619070 | 0.825178 | 5.400459e-54 | -8.615850e-47 |
Msa0137040 | Msa0630950 | 0.808236 | 3.420535e-50 | -8.615850e-47 |
Msa0137040 | Msa0638280 | 0.815316 | 9.841051e-52 | -8.615850e-47 |
Msa0137040 | Msa0638320 | 0.819002 | 1.459338e-52 | -8.615850e-47 |
Msa0137040 | Msa0639120 | 0.834756 | 2.493989e-56 | -8.615850e-47 |
Msa0137040 | Msa0643250 | 0.805812 | 1.114055e-49 | -8.615850e-47 |
Msa0137040 | Msa0657460 | -0.813806 | 2.123802e-51 | -8.615850e-47 |
Msa0137040 | Msa0663900 | 0.809167 | 2.163357e-50 | -8.615850e-47 |
Msa0137040 | Msa0664960 | 0.823579 | 1.283729e-53 | -8.615850e-47 |
Msa0137040 | Msa0669850 | 0.863769 | 1.964780e-64 | -8.615850e-47 |
Msa0137040 | Msa0670270 | 0.814922 | 1.203958e-51 | -8.615850e-47 |
Msa0137040 | Msa0673470 | 0.801446 | 8.971945e-49 | -8.615850e-47 |
Msa0137040 | Msa0677270 | 0.821983 | 3.020687e-53 | -8.615850e-47 |
Msa0137040 | Msa0689010 | 0.806382 | 8.450711e-50 | -8.615850e-47 |
Msa0137040 | Msa0692940 | 0.804411 | 2.187928e-49 | -8.615850e-47 |
Msa0137040 | Msa0705600 | 0.801425 | 9.059524e-49 | -8.615850e-47 |
Msa0137040 | Msa0709500 | 0.802876 | 4.556664e-49 | -8.615850e-47 |
Msa0137040 | Msa0711490 | 0.856938 | 2.292277e-62 | -8.615850e-47 |
Msa0137040 | Msa0712310 | 0.816405 | 5.623760e-52 | -8.615850e-47 |
Msa0137040 | Msa0725920 | 0.801265 | 9.770931e-49 | -8.615850e-47 |
Msa0137040 | Msa0726830 | 0.838974 | 2.090261e-57 | -8.615850e-47 |
Msa0137040 | Msa0726860 | 0.824716 | 6.941415e-54 | -8.615850e-47 |
Msa0137040 | Msa0743260 | 0.810546 | 1.092462e-50 | -8.615850e-47 |
Msa0137040 | Msa0743680 | 0.808042 | 3.762196e-50 | -8.615850e-47 |
Msa0137040 | Msa0750350 | 0.803438 | 3.486648e-49 | -8.615850e-47 |
Msa0137040 | Msa0750430 | 0.804778 | 1.834276e-49 | -8.615850e-47 |
Msa0137040 | Msa0754720 | -0.811013 | 8.657159e-51 | -8.615850e-47 |
Msa0137040 | Msa0765380 | 0.804656 | 1.945069e-49 | -8.615850e-47 |
Msa0137040 | Msa0788710 | 0.806760 | 7.035377e-50 | -8.615850e-47 |
Msa0137040 | Msa0790390 | -0.829084 | 6.272664e-55 | -8.615850e-47 |
Msa0137040 | Msa0790850 | 0.811622 | 6.386661e-51 | -8.615850e-47 |
Msa0137040 | Msa0792090 | 0.834531 | 2.839627e-56 | -8.615850e-47 |
Msa0137040 | Msa0793390 | 0.819598 | 1.067852e-52 | -8.615850e-47 |
Msa0137040 | Msa0795030 | 0.805190 | 1.504524e-49 | -8.615850e-47 |
Msa0137040 | Msa0797120 | 0.831968 | 1.235665e-55 | -8.615850e-47 |
Msa0137040 | Msa0805500 | 0.827811 | 1.272792e-54 | -8.615850e-47 |
Msa0137040 | Msa0806920 | 0.802312 | 5.954165e-49 | -8.615850e-47 |
Msa0137040 | Msa0812570 | 0.808844 | 2.536412e-50 | -8.615850e-47 |
Msa0137040 | Msa0813720 | 0.807511 | 4.877816e-50 | -8.615850e-47 |
Msa0137040 | Msa0814250 | 0.828383 | 9.266739e-55 | -8.615850e-47 |
Msa0137040 | Msa0830990 | 0.820976 | 5.159069e-53 | -8.615850e-47 |
Msa0137040 | Msa0831580 | 0.814795 | 1.284387e-51 | -8.615850e-47 |
Msa0137040 | Msa0846030 | 0.819515 | 1.115338e-52 | -8.615850e-47 |
Msa0137040 | Msa0847080 | 0.827963 | 1.170079e-54 | -8.615850e-47 |
Msa0137040 | Msa0850960 | 0.814634 | 1.393904e-51 | -8.615850e-47 |
Msa0137040 | Msa0852730 | 0.811451 | 6.956015e-51 | -8.615850e-47 |
Msa0137040 | Msa0863870 | 0.802464 | 5.540240e-49 | -8.615850e-47 |
Msa0137040 | Msa0871890 | 0.808917 | 2.447014e-50 | -8.615850e-47 |
Msa0137040 | Msa0874500 | 0.844540 | 7.098572e-59 | -8.615850e-47 |
Msa0137040 | Msa0874670 | 0.817004 | 4.129363e-52 | -8.615850e-47 |
Msa0137040 | Msa0877410 | 0.803279 | 3.760598e-49 | -8.615850e-47 |
Msa0137040 | Msa0891600 | -0.806915 | 6.524446e-50 | -8.615850e-47 |
Msa0137040 | Msa0895030 | 0.803310 | 3.705093e-49 | -8.615850e-47 |
Msa0137040 | Msa0899230 | 0.801817 | 7.529416e-49 | -8.615850e-47 |
Msa0137040 | Msa0900630 | 0.808848 | 2.531363e-50 | -8.615850e-47 |
Msa0137040 | Msa0905260 | 0.838416 | 2.914208e-57 | -8.615850e-47 |
Msa0137040 | Msa0908170 | 0.811025 | 8.605120e-51 | -8.615850e-47 |
Msa0137040 | Msa0922540 | 0.806569 | 7.719290e-50 | -8.615850e-47 |
Msa0137040 | Msa0926460 | 0.818977 | 1.479142e-52 | -8.615850e-47 |
Msa0137040 | Msa0933290 | 0.810001 | 1.431948e-50 | -8.615850e-47 |
Msa0137040 | Msa0937240 | 0.828203 | 1.024522e-54 | -8.615850e-47 |
Msa0137040 | Msa0937330 | 0.802155 | 6.416524e-49 | -8.615850e-47 |
Msa0137040 | Msa0939790 | 0.833229 | 6.011691e-56 | -8.615850e-47 |
Msa0137040 | Msa0945100 | 0.802246 | 6.145758e-49 | -8.615850e-47 |
Msa0137040 | Msa0959010 | 0.824230 | 9.032283e-54 | -8.615850e-47 |
Msa0137040 | Msa0959840 | 0.811573 | 6.543978e-51 | -8.615850e-47 |
Msa0137040 | Msa0960160 | 0.816859 | 4.451126e-52 | -8.615850e-47 |
Msa0137040 | Msa0965860 | 0.822231 | 2.646096e-53 | -8.615850e-47 |
Msa0137040 | Msa0967370 | 0.807672 | 4.508070e-50 | -8.615850e-47 |
Msa0137040 | Msa0970030 | 0.823440 | 1.383907e-53 | -8.615850e-47 |
Msa0137040 | Msa0974530 | 0.850493 | 1.638589e-60 | -8.615850e-47 |
Msa0137040 | Msa0974810 | 0.816055 | 6.733797e-52 | -8.615850e-47 |
Msa0137040 | Msa0976330 | 0.808190 | 3.497258e-50 | -8.615850e-47 |
Msa0137040 | Msa0979550 | 0.812983 | 3.221110e-51 | -8.615850e-47 |
Msa0137040 | Msa0993530 | 0.838576 | 2.650031e-57 | -8.615850e-47 |
Msa0137040 | Msa0999040 | 0.800016 | 1.755954e-48 | -8.615850e-47 |
Msa0137040 | Msa1009780 | 0.810183 | 1.308467e-50 | -8.615850e-47 |
Msa0137040 | Msa1013040 | 0.809299 | 2.026166e-50 | -8.615850e-47 |
Msa0137040 | Msa1026760 | 0.818733 | 1.680511e-52 | -8.615850e-47 |
Msa0137040 | Msa1026790 | 0.816089 | 6.618165e-52 | -8.615850e-47 |
Msa0137040 | Msa1037700 | -0.806910 | 6.540470e-50 | -8.615850e-47 |
Msa0137040 | Msa1039880 | 0.804763 | 1.847544e-49 | -8.615850e-47 |
Msa0137040 | Msa1040890 | 0.822112 | 2.819814e-53 | -8.615850e-47 |
Msa0137040 | Msa1050200 | 0.808056 | 3.735824e-50 | -8.615850e-47 |
Msa0137040 | Msa1069660 | -0.829224 | 5.801637e-55 | -8.615850e-47 |
Msa0137040 | Msa1072460 | -0.809815 | 1.570121e-50 | -8.615850e-47 |
Msa0137040 | Msa1084470 | 0.801768 | 7.705809e-49 | -8.615850e-47 |
Msa0137040 | Msa1089840 | 0.843840 | 1.093901e-58 | -8.615850e-47 |
Msa0137040 | Msa1093330 | 0.805974 | 1.030024e-49 | -8.615850e-47 |
Msa0137040 | Msa1097840 | 0.800896 | 1.162141e-48 | -8.615850e-47 |
Msa0137040 | Msa1100720 | 0.800916 | 1.151253e-48 | -8.615850e-47 |
Msa0137040 | Msa1111700 | 0.814274 | 1.674672e-51 | -8.615850e-47 |
Msa0137040 | Msa1125550 | 0.803582 | 3.255067e-49 | -8.615850e-47 |
Msa0137040 | Msa1126120 | -0.823866 | 1.099563e-53 | -8.615850e-47 |
Msa0137040 | Msa1130210 | -0.845136 | 4.901574e-59 | -8.615850e-47 |
Msa0137040 | Msa1134110 | 0.806969 | 6.354621e-50 | -8.615850e-47 |
Msa0137040 | Msa1143840 | 0.832109 | 1.139970e-55 | -8.615850e-47 |
Msa0137040 | Msa1166010 | 0.801479 | 8.829941e-49 | -8.615850e-47 |
Msa0137040 | Msa1171360 | 0.804732 | 1.875997e-49 | -8.615850e-47 |
Msa0137040 | Msa1171870 | 0.815559 | 8.686848e-52 | -8.615850e-47 |
Msa0137040 | Msa1193950 | -0.807118 | 5.908157e-50 | -8.615850e-47 |
Msa0137040 | Msa1217660 | 0.806892 | 6.597251e-50 | -8.615850e-47 |
Msa0137040 | Msa1217830 | 0.838662 | 2.516553e-57 | -8.615850e-47 |
Msa0137040 | Msa1217860 | 0.831264 | 1.842448e-55 | -8.615850e-47 |
Msa0137040 | Msa1218650 | 0.805758 | 1.143782e-49 | -8.615850e-47 |
Msa0137040 | Msa1224670 | 0.808687 | 2.740195e-50 | -8.615850e-47 |
Msa0137040 | Msa1233500 | 0.804201 | 2.420446e-49 | -8.615850e-47 |
Msa0137040 | Msa1236070 | -0.822410 | 2.404913e-53 | -8.615850e-47 |
Msa0137040 | Msa1246530 | -0.806424 | 8.281911e-50 | -8.615850e-47 |
Msa0137040 | Msa1249240 | 0.809611 | 1.737391e-50 | -8.615850e-47 |
Msa0137040 | Msa1249920 | 0.803609 | 3.212685e-49 | -8.615850e-47 |
Msa0137040 | Msa1267260 | 0.837360 | 5.442091e-57 | -8.615850e-47 |
Msa0137040 | Msa1269300 | 0.844283 | 8.322279e-59 | -8.615850e-47 |
Msa0137040 | Msa1269580 | -0.828575 | 8.328784e-55 | -8.615850e-47 |
Msa0137040 | Msa1294960 | 0.817338 | 3.472261e-52 | -8.615850e-47 |
Msa0137040 | Msa1300350 | -0.804110 | 2.527617e-49 | -8.615850e-47 |
Msa0137040 | Msa1303160 | 0.829776 | 4.259836e-55 | -8.615850e-47 |
Msa0137040 | Msa1306430 | 0.818515 | 1.883127e-52 | -8.615850e-47 |
Msa0137040 | Msa1341070 | 0.820388 | 7.041550e-53 | -8.615850e-47 |
Msa0137040 | Msa1356440 | 0.822560 | 2.218733e-53 | -8.615850e-47 |
Msa0137040 | Msa1359390 | 0.819662 | 1.032313e-52 | -8.615850e-47 |
Msa0137040 | Msa1361850 | 0.859338 | 4.431945e-63 | -8.615850e-47 |
Msa0137040 | Msa1362510 | 0.825244 | 5.209865e-54 | -8.615850e-47 |
Msa0137040 | Msa1363700 | 0.823093 | 1.667457e-53 | -8.615850e-47 |
Msa0137040 | Msa1365150 | 0.800892 | 1.164529e-48 | -8.615850e-47 |
Msa0137040 | Msa1368210 | 0.809589 | 1.755968e-50 | -8.615850e-47 |
Msa0137040 | Msa1371090 | 0.811686 | 6.183649e-51 | -8.615850e-47 |
Msa0137040 | Msa1375990 | 0.804760 | 1.851016e-49 | -8.615850e-47 |
Msa0137040 | Msa1382310 | 0.829909 | 3.953270e-55 | -8.615850e-47 |
Msa0137040 | Msa1382410 | 0.815470 | 9.096309e-52 | -8.615850e-47 |
Msa0137040 | Msa1390230 | 0.802883 | 4.541422e-49 | -8.615850e-47 |
Msa0137040 | Msa1390310 | 0.839999 | 1.131941e-57 | -8.615850e-47 |
Msa0137040 | Msa1403580 | -0.840801 | 6.986035e-58 | -8.615850e-47 |
Msa0137040 | Msa1412930 | -0.817300 | 3.541967e-52 | -8.615850e-47 |
Msa0137040 | Msa1416390 | 0.827672 | 1.374869e-54 | -8.615850e-47 |
Msa0137040 | Msa1417120 | 0.802032 | 6.801497e-49 | -8.615850e-47 |
Msa0137040 | Msa1417830 | -0.804250 | 2.363823e-49 | -8.615850e-47 |
Msa0137040 | Msa1419110 | 0.803779 | 2.961815e-49 | -8.615850e-47 |
Msa0137040 | Msa1427830 | 0.814964 | 1.178401e-51 | -8.615850e-47 |
Msa0137040 | Msa1429360 | -0.820272 | 7.488224e-53 | -8.615850e-47 |
Msa0137040 | Msa1439230 | 0.808603 | 2.855987e-50 | -8.615850e-47 |
Msa0137040 | Msa1439960 | 0.843145 | 1.676991e-58 | -8.615850e-47 |
Msa0137040 | Msa1440000 | 0.802902 | 4.500165e-49 | -8.615850e-47 |
Msa0137040 | Msa1443290 | -0.823857 | 1.104807e-53 | -8.615850e-47 |
Msa0137040 | Msa1445420 | -0.810105 | 1.359670e-50 | -8.615850e-47 |
Msa0137040 | Msa1452470 | 0.862540 | 4.714787e-64 | -8.615850e-47 |
Msa0137040 | Msa1454110 | 0.824604 | 7.375525e-54 | -8.615850e-47 |
Msa0137040 | Msa1460470 | 0.806028 | 1.003770e-49 | -8.615850e-47 |
Msa0137040 | Msa1461280 | 0.803240 | 3.830342e-49 | -8.615850e-47 |
Msa0137040 | Msa1465960 | 0.815946 | 7.124783e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0137040 | MtrunA17_Chr1g0209081 | 94.545 | 220 | 8 | 1 | 1 | 220 | 1 | 216 | 1.48e-142 | 396 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0137040 | AT1G68185.1 | 47.085 | 223 | 107 | 6 | 1 | 220 | 1 | 215 | 3.14e-49 | 160 |
Msa0137040 | AT1G68185.3 | 47.085 | 223 | 107 | 6 | 1 | 220 | 1 | 215 | 3.14e-49 | 160 |
Msa0137040 | AT1G68185.2 | 47.085 | 223 | 107 | 6 | 1 | 220 | 47 | 261 | 2.40e-48 | 159 |
Find 69 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGAGCTGAGATTGACATTT+TGG | 0.125187 | 1_3:-69348198 | Msa0137040:three_prime_UTR |
AATAATTAATTATTATATTT+TGG | 0.126010 | 1_3:+69347907 | None:intergenic |
ACCCTCATGTTATACAAATT+TGG | 0.152649 | 1_3:+69347810 | None:intergenic |
GTATAACATGAGGGTTATTT+AGG | 0.223417 | 1_3:-69347802 | Msa0137040:three_prime_UTR |
CCTCCTCATCAGTCTTCTTA+TGG | 0.228908 | 1_3:+69350151 | None:intergenic |
GAATTCTTCTTTCTCTTCTT+AGG | 0.234591 | 1_3:+69350383 | None:intergenic |
ACCATCGAGGCACACGATAT+TGG | 0.263756 | 1_3:+69350547 | None:intergenic |
AAAGCAGATTCGGATGTTTA+TGG | 0.264643 | 1_3:-69349465 | Msa0137040:intron |
ATGTGAAGTCAAGTTGATTT+AGG | 0.273644 | 1_3:-69349047 | Msa0137040:intron |
GCAGCTGTTGGCCCTCTCTA+AGG | 0.327070 | 1_3:-69347871 | Msa0137040:three_prime_UTR |
TATCATTATCTTCCATTTCA+AGG | 0.332434 | 1_3:+69349082 | None:intergenic |
ATGATGTTGTGCATTATGTT+TGG | 0.333046 | 1_3:-69347982 | Msa0137040:three_prime_UTR |
CAAAATCCAGACAGCGATAA+TGG | 0.337536 | 1_3:-69350708 | Msa0137040:exon |
AAAATATGTACTGTACAATT+AGG | 0.339197 | 1_3:+69348090 | None:intergenic |
TGCACAACATCATCAATAGA+AGG | 0.365604 | 1_3:+69347992 | None:intergenic |
CCATCGAGGCACACGATATT+GGG | 0.373094 | 1_3:+69350548 | None:intergenic |
AGTCTTCTTATGGGCCTTAC+CGG | 0.377421 | 1_3:+69350161 | None:intergenic |
GTAGAAGTTCTTTCGGTGTA+TGG | 0.379855 | 1_3:-69348040 | Msa0137040:three_prime_UTR |
CTCCTCATCAGTCTTCTTAT+GGG | 0.387413 | 1_3:+69350152 | None:intergenic |
AAACAAGGGTTCAAGTTCTT+CGG | 0.392297 | 1_3:+69350589 | None:intergenic |
AACCCCTGCCAGCCTTGAAA+TGG | 0.394451 | 1_3:-69349094 | Msa0137040:CDS |
TGATGTTGTGCATTATGTTT+GGG | 0.409527 | 1_3:-69347981 | Msa0137040:three_prime_UTR |
CAAATTGTGTTGTCATTTGA+CGG | 0.420581 | 1_3:-69349138 | Msa0137040:CDS |
CCCAATATCGTGTGCCTCGA+TGG | 0.441844 | 1_3:-69350548 | Msa0137040:intron |
ATTCAACTTTGAAGAATTTG+AGG | 0.442827 | 1_3:-69350128 | Msa0137040:intron |
AGGGTTATTTAGGATACAAA+TGG | 0.446647 | 1_3:-69347792 | Msa0137040:three_prime_UTR |
TTTGGGGTTTAGGTTGAGAA+TGG | 0.451301 | 1_3:-69350261 | Msa0137040:intron |
CTGATGCAGATCTTCGATCA+TGG | 0.453261 | 1_3:-69348218 | Msa0137040:intron |
TCTTCCATTTCAAGGCTGGC+AGG | 0.456162 | 1_3:+69349090 | None:intergenic |
AGGATGAAACAAAGCAGATT+CGG | 0.459454 | 1_3:-69349475 | Msa0137040:CDS |
TTCCATTTCAAGGCTGGCAG+GGG | 0.465493 | 1_3:+69349092 | None:intergenic |
GCCTTACCGGTGACCCTTGG+TGG | 0.466237 | 1_3:+69350174 | None:intergenic |
CCACAACAACTGCCGTGAAA+AGG | 0.475289 | 1_3:+69347842 | None:intergenic |
TGGGCCTTACCGGTGACCCT+TGG | 0.476360 | 1_3:+69350171 | None:intergenic |
ATTATCTTCCATTTCAAGGC+TGG | 0.485099 | 1_3:+69349086 | None:intergenic |
GCCACCAAGGGTCACCGGTA+AGG | 0.490738 | 1_3:-69350175 | Msa0137040:CDS |
CTTCCATTTCAAGGCTGGCA+GGG | 0.494291 | 1_3:+69349091 | None:intergenic |
CAATTCATTGCAACCTTCCG+TGG | 0.499026 | 1_3:-69349564 | Msa0137040:CDS |
TTATTTATGCTAGCAGCTGT+TGG | 0.504433 | 1_3:-69347883 | Msa0137040:three_prime_UTR |
TTGGGGTTTAGGTTGAGAAT+GGG | 0.505216 | 1_3:-69350260 | Msa0137040:intron |
GTTCTTTCGGTGTATGGCAT+AGG | 0.505606 | 1_3:-69348034 | Msa0137040:three_prime_UTR |
AGAATCTTTGCTCGTTCAGA+AGG | 0.520871 | 1_3:+69349515 | None:intergenic |
TCACCGCCATTATCGCTGTC+TGG | 0.521152 | 1_3:+69350702 | None:intergenic |
TTTGTATAGATTGAAGAAGC+AGG | 0.529052 | 1_3:-69349660 | Msa0137040:intron |
TCACTTACGTCGTCCACGGA+AGG | 0.541348 | 1_3:+69349551 | None:intergenic |
AACCAAATTTGTATAACATG+AGG | 0.548156 | 1_3:-69347812 | Msa0137040:three_prime_UTR |
CCGGTGACCCTTGGTGGCGA+AGG | 0.548861 | 1_3:+69350180 | None:intergenic |
TGTAGGATGACCAGTTTGAA+AGG | 0.550107 | 1_3:-69349203 | Msa0137040:intron |
ACCAAATTTGTATAACATGA+GGG | 0.557726 | 1_3:-69347811 | Msa0137040:three_prime_UTR |
CCTTCGCCACCAAGGGTCAC+CGG | 0.569098 | 1_3:-69350180 | Msa0137040:CDS |
TGAGAATGGGAAGAATACTA+AGG | 0.569816 | 1_3:-69350247 | Msa0137040:CDS |
TTGGTTACCTTCGCCACCAA+GGG | 0.579619 | 1_3:-69350187 | Msa0137040:CDS |
GCACAACATCATCAATAGAA+GGG | 0.585781 | 1_3:+69347993 | None:intergenic |
AACGCGACTGTAATCAAACA+AGG | 0.602179 | 1_3:+69350574 | None:intergenic |
AAAAGGTTACAGCCTTAGAG+AGG | 0.611672 | 1_3:+69347859 | None:intergenic |
GAATGGGAAGAATACTAAGG+TGG | 0.613980 | 1_3:-69350244 | Msa0137040:CDS |
TGGACCTCGAGGATGATGAT+TGG | 0.623297 | 1_3:-69350206 | Msa0137040:CDS |
TCTCATCTCTGTTCAAGACA+AGG | 0.626807 | 1_3:-69349495 | Msa0137040:CDS |
CCATAAGAAGACTGATGAGG+AGG | 0.627181 | 1_3:-69350151 | Msa0137040:CDS |
ATTGGTTACCTTCGCCACCA+AGG | 0.629138 | 1_3:-69350188 | Msa0137040:CDS |
AAAGGTTACAGCCTTAGAGA+GGG | 0.685304 | 1_3:+69347860 | None:intergenic |
TAAGGTGGAAACAGTGAATG+TGG | 0.687527 | 1_3:-69350229 | Msa0137040:CDS |
GGCCCATAAGAAGACTGATG+AGG | 0.692280 | 1_3:-69350154 | Msa0137040:CDS |
AGTGAATGTGGTGGACCTCG+AGG | 0.707436 | 1_3:-69350217 | Msa0137040:CDS |
GGTGGAAACAGTGAATGTGG+TGG | 0.711849 | 1_3:-69350226 | Msa0137040:CDS |
AATCCAGACAGCGATAATGG+CGG | 0.717060 | 1_3:-69350705 | Msa0137040:intron |
TTAAGGAGTGCTAACCATCG+AGG | 0.734889 | 1_3:+69350534 | None:intergenic |
ACGCGACTGTAATCAAACAA+GGG | 0.742183 | 1_3:+69350575 | None:intergenic |
GTAACCAATCATCATCCTCG+AGG | 0.759157 | 1_3:+69350202 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATAATTAATTATTATATTT+TGG | + | chr1_3:69350700-69350719 | None:intergenic | 0.0% |
!! | TTAATTTCAATTTGAATAAT+CGG | + | chr1_3:69348101-69348120 | None:intergenic | 10.0% |
!! | AAACAAAAAATTTAACATTT+GGG | + | chr1_3:69348128-69348147 | None:intergenic | 10.0% |
!! | AAAACAAAAAATTTAACATT+TGG | + | chr1_3:69348129-69348148 | None:intergenic | 10.0% |
!! | TACTCAATTTCAAATAATTA+GGG | - | chr1_3:69347933-69347952 | Msa0137040:three_prime_UTR | 15.0% |
!! | AACAAAAAATTTAACATTTG+GGG | + | chr1_3:69348127-69348146 | None:intergenic | 15.0% |
!!! | TGTAAATTTTGATAATGTTT+TGG | - | chr1_3:69348325-69348344 | Msa0137040:intron | 15.0% |
!!! | GTAAATTTTGATAATGTTTT+GGG | - | chr1_3:69348326-69348345 | Msa0137040:intron | 15.0% |
!!! | TAAATTTTGATAATGTTTTG+GGG | - | chr1_3:69348327-69348346 | Msa0137040:intron | 15.0% |
!! | CTGATAAAGAAAATAAAAAA+AGG | + | chr1_3:69349298-69349317 | None:intergenic | 15.0% |
!!! | ATTTTAAAGTAAGAAAACTA+AGG | - | chr1_3:69349749-69349768 | Msa0137040:intron | 15.0% |
!! | AAATTGAAAATATTATCTTC+TGG | + | chr1_3:69349856-69349875 | None:intergenic | 15.0% |
!!! | ATTTTCAATTTTTTCAACAA+TGG | - | chr1_3:69349865-69349884 | Msa0137040:intron | 15.0% |
!!! | CGCTTTTTTTTTTTTTTTGA+AGG | + | chr1_3:69347823-69347842 | None:intergenic | 20.0% |
!! | GTACTCAATTTCAAATAATT+AGG | - | chr1_3:69347932-69347951 | Msa0137040:three_prime_UTR | 20.0% |
!! | ACAAAAAATTTAACATTTGG+GGG | + | chr1_3:69348126-69348145 | None:intergenic | 20.0% |
!! | CAAAACAAAAAACACAAATT+TGG | + | chr1_3:69348278-69348297 | None:intergenic | 20.0% |
!! | AATGGCAAAAAACAAAAATT+TGG | + | chr1_3:69348539-69348558 | None:intergenic | 20.0% |
!! | TTAAAATAACATGCTCATAA+AGG | - | chr1_3:69348719-69348738 | Msa0137040:intron | 20.0% |
!! | TAAAATAACATGCTCATAAA+GGG | - | chr1_3:69348720-69348739 | Msa0137040:intron | 20.0% |
!!! | TTGTATAAAAAAAGTGTGTT+GGG | - | chr1_3:69348768-69348787 | Msa0137040:intron | 20.0% |
!! | ATGAGTAGAATAACTTATAT+TGG | + | chr1_3:69348853-69348872 | None:intergenic | 20.0% |
!! | TAAAGAAAATAAAAAAAGGC+AGG | + | chr1_3:69349294-69349313 | None:intergenic | 20.0% |
!!! | ATTTTGTTTATAATAGTGAC+CGG | + | chr1_3:69350022-69350041 | None:intergenic | 20.0% |
!!! | GCTTTTTTATCAATTTTTAC+TGG | - | chr1_3:69350457-69350476 | Msa0137040:intron | 20.0% |
!! | AAAATATGTACTGTACAATT+AGG | + | chr1_3:69350517-69350536 | None:intergenic | 20.0% |
!! | AATTTTACAGCATAGAAAAG+AGG | - | chr1_3:69347775-69347794 | Msa0137040:three_prime_UTR | 25.0% |
!! | TGAAGATTTGAAATTGAAAG+AGG | + | chr1_3:69347961-69347980 | None:intergenic | 25.0% |
! | TTGAATAATCGGAATAGTTA+AGG | + | chr1_3:69348090-69348109 | None:intergenic | 25.0% |
!!! | TGTGTTTTTTGTTTTGTACA+AGG | - | chr1_3:69348282-69348301 | Msa0137040:intron | 25.0% |
!! | ATTCAACTTTGAAGAATTTG+AGG | - | chr1_3:69348476-69348495 | Msa0137040:intron | 25.0% |
! | TAAGTAAACAAACAATGCAA+TGG | + | chr1_3:69348557-69348576 | None:intergenic | 25.0% |
!! | CTTGTATAAAAAAAGTGTGT+TGG | - | chr1_3:69348767-69348786 | Msa0137040:intron | 25.0% |
! | TAACTAATTAAGCCTATTCT+TGG | - | chr1_3:69348815-69348834 | Msa0137040:intron | 25.0% |
! | ACATCTTATAAGAAACTGTA+TGG | + | chr1_3:69348918-69348937 | None:intergenic | 25.0% |
! | TGTTGATGTTCTTAATATTG+TGG | - | chr1_3:69349193-69349212 | Msa0137040:CDS | 25.0% |
!!! | TAGTTGTAGTTTGTTTGAAA+TGG | - | chr1_3:69349244-69349263 | Msa0137040:intron | 25.0% |
!! | AGTTTGTTTGAAATGGTATA+AGG | - | chr1_3:69349251-69349270 | Msa0137040:intron | 25.0% |
!! | GTTTGTTTGAAATGGTATAA+GGG | - | chr1_3:69349252-69349271 | Msa0137040:intron | 25.0% |
!!! | TTTTGATAATCCTTTCAAAC+TGG | + | chr1_3:69349414-69349433 | None:intergenic | 25.0% |
! | TATCATTATCTTCCATTTCA+AGG | + | chr1_3:69349525-69349544 | None:intergenic | 25.0% |
! | TTGAATACAAATTCATCATC+AGG | + | chr1_3:69349693-69349712 | None:intergenic | 25.0% |
! | TGAATTTGTATTCAAGTGTA+TGG | - | chr1_3:69349698-69349717 | Msa0137040:intron | 25.0% |
! | TGTGGTAAATATCATTTGTA+AGG | - | chr1_3:69349935-69349954 | Msa0137040:intron | 25.0% |
!! | ATTTTGCTTATAATAGTGAC+CGG | - | chr1_3:69350128-69350147 | Msa0137040:intron | 25.0% |
!!! | GTCTTCTATATTTTAAGAAC+TGG | + | chr1_3:69350495-69350514 | None:intergenic | 25.0% |
!!! | TTGTACAGTACATATTTTGA+CGG | - | chr1_3:69350519-69350538 | Msa0137040:intron | 25.0% |
!!! | TTTTTAGGTAGAAGTTCTTT+CGG | - | chr1_3:69350557-69350576 | Msa0137040:CDS | 25.0% |
!! | AACTCTATAGAATTTTGTCA+AGG | - | chr1_3:69350655-69350674 | Msa0137040:intron | 25.0% |
! | AACCAAATTTGTATAACATG+AGG | - | chr1_3:69350792-69350811 | Msa0137040:five_prime_UTR | 25.0% |
! | ACCAAATTTGTATAACATGA+GGG | - | chr1_3:69350793-69350812 | Msa0137040:five_prime_UTR | 25.0% |
!! | AAGCGAATTCAATTTTGAAG+CGG | - | chr1_3:69347838-69347857 | Msa0137040:three_prime_UTR | 30.0% |
GAATTCTTCTTTCTCTTCTT+AGG | + | chr1_3:69348224-69348243 | None:intergenic | 30.0% | |
! | TCAACATGTAGTGAGTATTT+TGG | - | chr1_3:69348250-69348269 | Msa0137040:intron | 30.0% |
!! | TTGTTTTGTACAAGGATGTT+TGG | - | chr1_3:69348290-69348309 | Msa0137040:intron | 30.0% |
!!! | TTGATAATGTTTTGGGGTTT+AGG | - | chr1_3:69348333-69348352 | Msa0137040:intron | 30.0% |
TTTGTTTACTTAACACTCCT+AGG | - | chr1_3:69348565-69348584 | Msa0137040:intron | 30.0% | |
!! | TGGTTTAACTTGTTAAACCT+AGG | + | chr1_3:69348585-69348604 | None:intergenic | 30.0% |
!! | TTTTCCGATTCGTTTGATTT+CGG | + | chr1_3:69348656-69348675 | None:intergenic | 30.0% |
!!! | GTAGCAATGTTTTAAAAACC+AGG | + | chr1_3:69348684-69348703 | None:intergenic | 30.0% |
AATTAAGCCTATTCTTGGTT+TGG | - | chr1_3:69348820-69348839 | Msa0137040:intron | 30.0% | |
TAAAGTTCCAAACCAAGAAT+AGG | + | chr1_3:69348830-69348849 | None:intergenic | 30.0% | |
TTTGTATAGATTGAAGAAGC+AGG | - | chr1_3:69348944-69348963 | Msa0137040:intron | 30.0% | |
!! | TATTTGTCACTTTATCTAGC+TGG | - | chr1_3:69349351-69349370 | Msa0137040:intron | 30.0% |
ATCCTACAGAGAATTGAAAA+AGG | + | chr1_3:69349389-69349408 | None:intergenic | 30.0% | |
! | CAAATTGTGTTGTCATTTGA+CGG | - | chr1_3:69349466-69349485 | Msa0137040:CDS | 30.0% |
!! | ATGTGAAGTCAAGTTGATTT+AGG | - | chr1_3:69349557-69349576 | Msa0137040:CDS | 30.0% |
!! | AGATCCACTTCTATTTCTAA+TGG | + | chr1_3:69349802-69349821 | None:intergenic | 30.0% |
AATGATGAATGCTCATACTT+AGG | - | chr1_3:69349911-69349930 | Msa0137040:intron | 30.0% | |
ATGATGAATGCTCATACTTA+GGG | - | chr1_3:69349912-69349931 | Msa0137040:intron | 30.0% | |
GGTAAATATCATTTGTAAGG+AGG | - | chr1_3:69349938-69349957 | Msa0137040:intron | 30.0% | |
AAATTATTCATTACTCCCTC+CGG | - | chr1_3:69350000-69350019 | Msa0137040:intron | 30.0% | |
!! | TAGGCATTGTTATGTGATTT+TGG | - | chr1_3:69350165-69350184 | Msa0137040:CDS | 30.0% |
! | CAATTGATTATGCTGTTTGT+TGG | - | chr1_3:69350298-69350317 | Msa0137040:intron | 30.0% |
ATGATGTTGTGCATTATGTT+TGG | - | chr1_3:69350622-69350641 | Msa0137040:intron | 30.0% | |
TGATGTTGTGCATTATGTTT+GGG | - | chr1_3:69350623-69350642 | Msa0137040:intron | 30.0% | |
ACCCTCATGTTATACAAATT+TGG | + | chr1_3:69350797-69350816 | None:intergenic | 30.0% | |
GTATAACATGAGGGTTATTT+AGG | - | chr1_3:69350802-69350821 | Msa0137040:five_prime_UTR | 30.0% | |
! | AGGGTTATTTAGGATACAAA+TGG | - | chr1_3:69350812-69350831 | Msa0137040:five_prime_UTR | 30.0% |
!!! | AGCGAATTCAATTTTGAAGC+GGG | - | chr1_3:69347839-69347858 | Msa0137040:three_prime_UTR | 35.0% |
! | AAACAAGGGTTCAAGTTCTT+CGG | + | chr1_3:69348018-69348037 | None:intergenic | 35.0% |
TGAGAATGGGAAGAATACTA+AGG | - | chr1_3:69348357-69348376 | Msa0137040:intron | 35.0% | |
ACAATGTAGTCTGATTGAAC+TGG | + | chr1_3:69348631-69348650 | None:intergenic | 35.0% | |
GTAACCGAAATCAAACGAAT+CGG | - | chr1_3:69348649-69348668 | Msa0137040:intron | 35.0% | |
!!! | TTTTGCTGATTCAGCAAAAG+CGG | + | chr1_3:69348976-69348995 | None:intergenic | 35.0% |
AGGATGAAACAAAGCAGATT+CGG | - | chr1_3:69349129-69349148 | Msa0137040:CDS | 35.0% | |
AAAGCAGATTCGGATGTTTA+TGG | - | chr1_3:69349139-69349158 | Msa0137040:CDS | 35.0% | |
!!! | GGTTGTTTTTATTAGTGCTC+TGG | - | chr1_3:69349214-69349233 | Msa0137040:intron | 35.0% |
TATCAGAGCTGCATTTCTTT+AGG | - | chr1_3:69349312-69349331 | Msa0137040:intron | 35.0% | |
!!! | CTCCTTTTTCAATTCTCTGT+AGG | - | chr1_3:69349384-69349403 | Msa0137040:intron | 35.0% |
ATTATCTTCCATTTCAAGGC+TGG | + | chr1_3:69349521-69349540 | None:intergenic | 35.0% | |
ATTCAAGTGTATGGAAAGAG+AGG | - | chr1_3:69349707-69349726 | Msa0137040:intron | 35.0% | |
AGCACCATTAGAAATAGAAG+TGG | - | chr1_3:69349795-69349814 | Msa0137040:intron | 35.0% | |
ACATGTTTATTCTTAGCCTC+AGG | - | chr1_3:69349971-69349990 | Msa0137040:intron | 35.0% | |
TGAATAATTTCCTCTACCTG+AGG | + | chr1_3:69349990-69350009 | None:intergenic | 35.0% | |
TGTTTATAATAGTGACCGGA+GGG | + | chr1_3:69350018-69350037 | None:intergenic | 35.0% | |
TTGTTTATAATAGTGACCGG+AGG | + | chr1_3:69350019-69350038 | None:intergenic | 35.0% | |
! | GCATTGTTATGTGATTTTGG+AGG | - | chr1_3:69350168-69350187 | Msa0137040:CDS | 35.0% |
AGAACAATGCAACAATGCAA+AGG | + | chr1_3:69350204-69350223 | None:intergenic | 35.0% | |
! | ACTAACATGTGCTGCAATTT+TGG | - | chr1_3:69350323-69350342 | Msa0137040:intron | 35.0% |
!!! | CATATTTTGACGGAATGTCT+TGG | - | chr1_3:69350529-69350548 | Msa0137040:intron | 35.0% |
!! | AATGTCTTGGAGCACTTTTT+AGG | - | chr1_3:69350542-69350561 | Msa0137040:intron | 35.0% |
GCACAACATCATCAATAGAA+GGG | + | chr1_3:69350614-69350633 | None:intergenic | 35.0% | |
TGCACAACATCATCAATAGA+AGG | + | chr1_3:69350615-69350634 | None:intergenic | 35.0% | |
TTATTTATGCTAGCAGCTGT+TGG | - | chr1_3:69350721-69350740 | Msa0137040:five_prime_UTR | 35.0% | |
!!! | CGCTGTCTGGATTTTGATTA+AGG | + | chr1_3:69347892-69347911 | None:intergenic | 40.0% |
CAAAATCCAGACAGCGATAA+TGG | - | chr1_3:69347896-69347915 | Msa0137040:three_prime_UTR | 40.0% | |
! | TGTGTGTTTTTCCCATTTGC+AGG | - | chr1_3:69347986-69348005 | Msa0137040:three_prime_UTR | 40.0% |
TTCGGTTTCATCCTGCAAAT+GGG | + | chr1_3:69348000-69348019 | None:intergenic | 40.0% | |
ACGCGACTGTAATCAAACAA+GGG | + | chr1_3:69348032-69348051 | None:intergenic | 40.0% | |
AACGCGACTGTAATCAAACA+AGG | + | chr1_3:69348033-69348052 | None:intergenic | 40.0% | |
!! | TTTGGGGTTTAGGTTGAGAA+TGG | - | chr1_3:69348343-69348362 | Msa0137040:intron | 40.0% |
!! | TTGGGGTTTAGGTTGAGAAT+GGG | - | chr1_3:69348344-69348363 | Msa0137040:intron | 40.0% |
GAATGGGAAGAATACTAAGG+TGG | - | chr1_3:69348360-69348379 | Msa0137040:intron | 40.0% | |
TAAGGTGGAAACAGTGAATG+TGG | - | chr1_3:69348375-69348394 | Msa0137040:intron | 40.0% | |
CTCCTCATCAGTCTTCTTAT+GGG | + | chr1_3:69348455-69348474 | None:intergenic | 40.0% | |
GAGTTGAATCAGTTGAATCG+CGG | + | chr1_3:69348609-69348628 | None:intergenic | 40.0% | |
! | TTTTTCACTTACGTCGTCCA+CGG | + | chr1_3:69349060-69349079 | None:intergenic | 40.0% |
AGAATCTTTGCTCGTTCAGA+AGG | + | chr1_3:69349092-69349111 | None:intergenic | 40.0% | |
TCTCATCTCTGTTCAAGACA+AGG | - | chr1_3:69349109-69349128 | Msa0137040:CDS | 40.0% | |
GATTCGGATGTTTATGGTAC+TGG | - | chr1_3:69349145-69349164 | Msa0137040:CDS | 40.0% | |
TGTAGGATGACCAGTTTGAA+AGG | - | chr1_3:69349401-69349420 | Msa0137040:intron | 40.0% | |
TATGGAAAGAGAGGATGACA+GGG | - | chr1_3:69349716-69349735 | Msa0137040:intron | 40.0% | |
TAAGGACCTTTCTTTCTCTG+AGG | - | chr1_3:69349767-69349786 | Msa0137040:intron | 40.0% | |
TTACTGCCTCAGAGAAAGAA+AGG | + | chr1_3:69349776-69349795 | None:intergenic | 40.0% | |
TTATTCTTAGCCTCAGGTAG+AGG | - | chr1_3:69349977-69349996 | Msa0137040:intron | 40.0% | |
TTGCTTATAATAGTGACCGG+AGG | - | chr1_3:69350131-69350150 | Msa0137040:CDS | 40.0% | |
TGCTTATAATAGTGACCGGA+GGG | - | chr1_3:69350132-69350151 | Msa0137040:CDS | 40.0% | |
GTTGCATTGTTCTTTGCCAT+TGG | - | chr1_3:69350211-69350230 | Msa0137040:CDS | 40.0% | |
!! | CAGTTCAGAAGTGTCATTTG+TGG | - | chr1_3:69350244-69350263 | Msa0137040:CDS | 40.0% |
AAATGCTACTAGAGCAGAAG+AGG | + | chr1_3:69350270-69350289 | None:intergenic | 40.0% | |
ATCGAAGATCTGCATCAGAA+AGG | + | chr1_3:69350384-69350403 | None:intergenic | 40.0% | |
! | TGGAGCTGAGATTGACATTT+TGG | - | chr1_3:69350406-69350425 | Msa0137040:CDS | 40.0% |
! | GGAGCTGAGATTGACATTTT+GGG | - | chr1_3:69350407-69350426 | Msa0137040:CDS | 40.0% |
! | GAGCTGAGATTGACATTTTG+GGG | - | chr1_3:69350408-69350427 | Msa0137040:CDS | 40.0% |
!! | ACATTTTGGGGACTCGTTTT+TGG | - | chr1_3:69350420-69350439 | Msa0137040:intron | 40.0% |
! | GTAGAAGTTCTTTCGGTGTA+TGG | - | chr1_3:69350564-69350583 | Msa0137040:CDS | 40.0% |
AAAGGTTACAGCCTTAGAGA+GGG | + | chr1_3:69350747-69350766 | None:intergenic | 40.0% | |
AAAAGGTTACAGCCTTAGAG+AGG | + | chr1_3:69350748-69350767 | None:intergenic | 40.0% | |
! | CTAAGGCTGTAACCTTTTCA+CGG | - | chr1_3:69350750-69350769 | Msa0137040:five_prime_UTR | 40.0% |
! | AATCCAGACAGCGATAATGG+CGG | - | chr1_3:69347899-69347918 | Msa0137040:three_prime_UTR | 45.0% |
CTTCGGTTTCATCCTGCAAA+TGG | + | chr1_3:69348001-69348020 | None:intergenic | 45.0% | |
!! | TTAAGGAGTGCTAACCATCG+AGG | + | chr1_3:69348073-69348092 | None:intergenic | 45.0% |
GTAACCAATCATCATCCTCG+AGG | + | chr1_3:69348405-69348424 | None:intergenic | 45.0% | |
AGTCTTCTTATGGGCCTTAC+CGG | + | chr1_3:69348446-69348465 | None:intergenic | 45.0% | |
CCTCCTCATCAGTCTTCTTA+TGG | + | chr1_3:69348456-69348475 | None:intergenic | 45.0% | |
CCATAAGAAGACTGATGAGG+AGG | - | chr1_3:69348453-69348472 | Msa0137040:intron | 45.0% | |
TGAATCAGTTGAATCGCGGT+TGG | + | chr1_3:69348605-69348624 | None:intergenic | 45.0% | |
ACGAATCGGAAAACTGAACC+TGG | - | chr1_3:69348663-69348682 | Msa0137040:intron | 45.0% | |
CAATTCATTGCAACCTTCCG+TGG | - | chr1_3:69349040-69349059 | Msa0137040:intron | 45.0% | |
GTATGGAAAGAGAGGATGAC+AGG | - | chr1_3:69349715-69349734 | Msa0137040:intron | 45.0% | |
AACAATGGTGAAGTGCAACG+AGG | - | chr1_3:69349880-69349899 | Msa0137040:intron | 45.0% | |
GAATGCTCATACTTAGGGTG+TGG | - | chr1_3:69349917-69349936 | Msa0137040:intron | 45.0% | |
!! | ACCGGAGGGAGTATTTGATT+AGG | - | chr1_3:69350146-69350165 | Msa0137040:CDS | 45.0% |
GCCTAATCAAATACTCCCTC+CGG | + | chr1_3:69350150-69350169 | None:intergenic | 45.0% | |
GAACTGTAGAGACAAGCCAA+TGG | + | chr1_3:69350230-69350249 | None:intergenic | 45.0% | |
CTGATGCAGATCTTCGATCA+TGG | - | chr1_3:69350386-69350405 | Msa0137040:CDS | 45.0% | |
! | GTTCTTTCGGTGTATGGCAT+AGG | - | chr1_3:69350570-69350589 | Msa0137040:CDS | 45.0% |
!!! | TATTTTAGAATAAAAATAAA+AGG | + | chr1_3:69348152-69348171 | None:intergenic | 5.0% |
CCATCGAGGCACACGATATT+GGG | + | chr1_3:69348059-69348078 | None:intergenic | 50.0% | |
ACCATCGAGGCACACGATAT+TGG | + | chr1_3:69348060-69348079 | None:intergenic | 50.0% | |
GGTGGAAACAGTGAATGTGG+TGG | - | chr1_3:69348378-69348397 | Msa0137040:intron | 50.0% | |
TGGACCTCGAGGATGATGAT+TGG | - | chr1_3:69348398-69348417 | Msa0137040:intron | 50.0% | |
ATTGGTTACCTTCGCCACCA+AGG | - | chr1_3:69348416-69348435 | Msa0137040:intron | 50.0% | |
TTGGTTACCTTCGCCACCAA+GGG | - | chr1_3:69348417-69348436 | Msa0137040:intron | 50.0% | |
GGCCCATAAGAAGACTGATG+AGG | - | chr1_3:69348450-69348469 | Msa0137040:intron | 50.0% | |
AGGCAGGCAGATCAGAAACA+TGG | + | chr1_3:69349278-69349297 | None:intergenic | 50.0% | |
TTCCATTTCAAGGCTGGCAG+GGG | + | chr1_3:69349515-69349534 | None:intergenic | 50.0% | |
CTTCCATTTCAAGGCTGGCA+GGG | + | chr1_3:69349516-69349535 | None:intergenic | 50.0% | |
TCTTCCATTTCAAGGCTGGC+AGG | + | chr1_3:69349517-69349536 | None:intergenic | 50.0% | |
GAAAGAGAGGATGACAGGGT+GGG | - | chr1_3:69349720-69349739 | Msa0137040:intron | 50.0% | |
AAAGAGAGGATGACAGGGTG+GGG | - | chr1_3:69349721-69349740 | Msa0137040:intron | 50.0% | |
CCACAACAACTGCCGTGAAA+AGG | + | chr1_3:69350765-69350784 | None:intergenic | 50.0% | |
! | CCTTTTCACGGCAGTTGTTG+TGG | - | chr1_3:69350762-69350781 | Msa0137040:five_prime_UTR | 50.0% |
TCACCGCCATTATCGCTGTC+TGG | + | chr1_3:69347905-69347924 | None:intergenic | 55.0% | |
CCCAATATCGTGTGCCTCGA+TGG | - | chr1_3:69348056-69348075 | Msa0137040:three_prime_UTR | 55.0% | |
!! | AGTGAATGTGGTGGACCTCG+AGG | - | chr1_3:69348387-69348406 | Msa0137040:intron | 55.0% |
TCACTTACGTCGTCCACGGA+AGG | + | chr1_3:69349056-69349075 | None:intergenic | 55.0% | |
AACCCCTGCCAGCCTTGAAA+TGG | - | chr1_3:69349510-69349529 | Msa0137040:CDS | 55.0% | |
GGAAAGAGAGGATGACAGGG+TGG | - | chr1_3:69349719-69349738 | Msa0137040:intron | 55.0% | |
AAGAGAGGATGACAGGGTGG+GGG | - | chr1_3:69349722-69349741 | Msa0137040:intron | 55.0% | |
GCAGCTGTTGGCCCTCTCTA+AGG | - | chr1_3:69350733-69350752 | Msa0137040:five_prime_UTR | 60.0% | |
CCTTCGCCACCAAGGGTCAC+CGG | - | chr1_3:69348424-69348443 | Msa0137040:intron | 65.0% | |
GCCACCAAGGGTCACCGGTA+AGG | - | chr1_3:69348429-69348448 | Msa0137040:intron | 65.0% | |
GCCTTACCGGTGACCCTTGG+TGG | + | chr1_3:69348433-69348452 | None:intergenic | 65.0% | |
TGGGCCTTACCGGTGACCCT+TGG | + | chr1_3:69348436-69348455 | None:intergenic | 65.0% | |
AGAGGATGACAGGGTGGGGG+TGG | - | chr1_3:69349725-69349744 | Msa0137040:intron | 65.0% | |
!! | CCGGTGACCCTTGGTGGCGA+AGG | + | chr1_3:69348427-69348446 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_3 | gene | 69347771 | 69350855 | 69347771 | ID=Msa0137040;Name=Msa0137040 |
chr1_3 | mRNA | 69347771 | 69350855 | 69347771 | ID=Msa0137040-mRNA-1;Parent=Msa0137040;Name=Msa0137040-mRNA-1;_AED=0.05;_eAED=0.05;_QI=144|1|1|1|0.83|0.71|7|466|220 |
chr1_3 | exon | 69347771 | 69348231 | 69347771 | ID=Msa0137040-mRNA-1:exon:23960;Parent=Msa0137040-mRNA-1 |
chr1_3 | exon | 69349048 | 69349220 | 69349048 | ID=Msa0137040-mRNA-1:exon:23959;Parent=Msa0137040-mRNA-1 |
chr1_3 | exon | 69349466 | 69349673 | 69349466 | ID=Msa0137040-mRNA-1:exon:23958;Parent=Msa0137040-mRNA-1 |
chr1_3 | exon | 69350129 | 69350271 | 69350129 | ID=Msa0137040-mRNA-1:exon:23957;Parent=Msa0137040-mRNA-1 |
chr1_3 | exon | 69350367 | 69350434 | 69350367 | ID=Msa0137040-mRNA-1:exon:23956;Parent=Msa0137040-mRNA-1 |
chr1_3 | exon | 69350549 | 69350618 | 69350549 | ID=Msa0137040-mRNA-1:exon:23955;Parent=Msa0137040-mRNA-1 |
chr1_3 | exon | 69350706 | 69350855 | 69350706 | ID=Msa0137040-mRNA-1:exon:23954;Parent=Msa0137040-mRNA-1 |
chr1_3 | five_prime_UTR | 69350712 | 69350855 | 69350712 | ID=Msa0137040-mRNA-1:five_prime_utr;Parent=Msa0137040-mRNA-1 |
chr1_3 | CDS | 69350706 | 69350711 | 69350706 | ID=Msa0137040-mRNA-1:cds;Parent=Msa0137040-mRNA-1 |
chr1_3 | CDS | 69350549 | 69350618 | 69350549 | ID=Msa0137040-mRNA-1:cds;Parent=Msa0137040-mRNA-1 |
chr1_3 | CDS | 69350367 | 69350434 | 69350367 | ID=Msa0137040-mRNA-1:cds;Parent=Msa0137040-mRNA-1 |
chr1_3 | CDS | 69350129 | 69350271 | 69350129 | ID=Msa0137040-mRNA-1:cds;Parent=Msa0137040-mRNA-1 |
chr1_3 | CDS | 69349466 | 69349673 | 69349466 | ID=Msa0137040-mRNA-1:cds;Parent=Msa0137040-mRNA-1 |
chr1_3 | CDS | 69349053 | 69349220 | 69349053 | ID=Msa0137040-mRNA-1:cds;Parent=Msa0137040-mRNA-1 |
chr1_3 | three_prime_UTR | 69349048 | 69349052 | 69349048 | ID=Msa0137040-mRNA-1:three_prime_utr;Parent=Msa0137040-mRNA-1 |
chr1_3 | three_prime_UTR | 69347771 | 69348231 | 69347771 | ID=Msa0137040-mRNA-1:three_prime_utr;Parent=Msa0137040-mRNA-1 |
Gene Sequence |
Protein sequence |