AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene063385

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063385.t1 MTR_2g064460 87.919 447 32 3 1 445 1 427 0.0 669
MS.gene063385.t1 MTR_2g064460 87.955 440 31 3 1 438 1 420 0.0 662
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063385.t1 AT3G58660 50.799 313 135 4 10 306 28 337 8.40e-107 324
MS.gene063385.t1 AT2G42650 50.313 320 139 8 10 315 8 321 2.14e-101 307
MS.gene063385.t1 AT1G06380 50.385 260 106 5 1 244 1 253 7.51e-81 251

Find 96 sgRNAs with CRISPR-Local

Find 124 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTGAGGGTGTTAAGGATT+TGG 0.249358 2.3:-26407434 MS.gene063385:CDS
TCTTGCTTTGCCGGTTTATC+AGG 0.252561 2.3:-26407479 MS.gene063385:CDS
GTTGGAGTCTCTTGCTTTGC+CGG 0.274544 2.3:-26407488 MS.gene063385:CDS
TTCGTCTTCGTCAAAGAGTT+TGG 0.284364 2.3:+26408092 None:intergenic
GCCGTTGTTGCCGAGGTTAT+TGG 0.297689 2.3:-26407764 MS.gene063385:CDS
TGCGACGGTGTCGGCGTTGC+TGG 0.306658 2.3:+26408170 None:intergenic
CCGTTGTTGCCGAGGTTATT+GGG 0.308899 2.3:-26407763 MS.gene063385:CDS
TTTCTTCTGAGCTTCGTCTT+TGG 0.323418 2.3:+26407918 None:intergenic
GCCGGTTTATCAGGCTGTTC+CGG 0.333800 2.3:-26407470 MS.gene063385:CDS
GATTCATGAGATTAAGTATA+TGG 0.340892 2.3:-26407347 MS.gene063385:CDS
CGAAGAAATGGGCGGTTGTT+AGG 0.343456 2.3:-26407528 MS.gene063385:CDS
ATCAGGCTGTTCCGGATGTT+AGG 0.369646 2.3:-26407462 MS.gene063385:CDS
AGCTTAAGAATCTTCGAAAT+AGG 0.370256 2.3:+26407877 None:intergenic
GTTGAAGATTGAGGGTGTTA+AGG 0.381230 2.3:-26407440 MS.gene063385:CDS
GAGATGAGAGAGTGAGGGAT+TGG 0.381358 2.3:+26408000 None:intergenic
TGGATTTGCAGAAGAAGAAT+TGG 0.381611 2.3:-26407702 MS.gene063385:CDS
TCGTCTTCGTCAAAGAGTTT+GGG 0.386076 2.3:+26408093 None:intergenic
TAAGGATTTGGAGGATAAGT+TGG 0.396868 2.3:-26407422 MS.gene063385:CDS
TCCGGAACAGCCTGATAAAC+CGG 0.418750 2.3:+26407469 None:intergenic
AGATGAGAGAGTGAGGGATT+GGG 0.425499 2.3:+26408001 None:intergenic
GAAGGTGGCTAAGTTGAGTA+TGG 0.428280 2.3:-26407611 MS.gene063385:CDS
TGAGGGTGTTAAGGATTTGG+AGG 0.430571 2.3:-26407431 MS.gene063385:CDS
GAAGTTATCCGTGAAGGAAA+AGG 0.432264 2.3:-26407029 MS.gene063385:CDS
AAAAGAGGATTCAAGTGAGT+TGG 0.441469 2.3:-26407155 MS.gene063385:CDS
AAAGAGGATTCAAGTGAGTT+GGG 0.443778 2.3:-26407154 MS.gene063385:CDS
GTTTAGCGGAAATGAATCAT+TGG 0.447165 2.3:-26406933 MS.gene063385:CDS
ATCGTCCGTTTGAGGCGAAA+AGG 0.448339 2.3:-26407834 MS.gene063385:CDS
CTAACAACCGCCCATTTCTT+CGG 0.449707 2.3:+26407529 None:intergenic
GGATGTTAGGTTGAAGATTG+AGG 0.450663 2.3:-26407449 MS.gene063385:CDS
TGAATCATTGGTCAAGGATG+AGG 0.453041 2.3:-26406921 MS.gene063385:CDS
GTTGATGATGATAGTGAGAT+TGG 0.469449 2.3:-26407229 MS.gene063385:CDS
GTGAGTAAGAAAAGGAAGAA+AGG 0.470427 2.3:-26407184 MS.gene063385:CDS
CCGTAGACTCTCTTCTCAAA+TGG 0.472791 2.3:-26408143 MS.gene063385:CDS
CAAAGAAGAAGAATAACAAA+AGG 0.474258 2.3:-26407003 MS.gene063385:CDS
GAAGAGGAAGATTCCGGTGC+AGG 0.476004 2.3:-26407725 MS.gene063385:CDS
GAAGAAGTGCTCATGTTTAG+CGG 0.478710 2.3:-26406947 MS.gene063385:CDS
AAAGAAGAAGAATAACAAAA+GGG 0.480788 2.3:-26407002 MS.gene063385:CDS
ATTGGTCAAGGATGAGGGTT+CGG 0.485154 2.3:-26406915 MS.gene063385:CDS
GATGTTAGGTTGAAGATTGA+GGG 0.487353 2.3:-26407448 MS.gene063385:CDS
CTCTCTCATCTCCGCAGCAT+CGG 0.488711 2.3:-26407989 MS.gene063385:CDS
GCTAAGAGGAAGAAGAAAGA+TGG 0.489873 2.3:-26407106 MS.gene063385:CDS
AGCTCAGAAGAAAGTTCAAT+CGG 0.490415 2.3:-26407908 MS.gene063385:CDS
CGAAGAAGAGTAAGAAGAAA+GGG 0.491276 2.3:-26407372 MS.gene063385:CDS
GCGAAGAAGAGTAAGAAGAA+AGG 0.499538 2.3:-26407373 MS.gene063385:CDS
GAGGGTTGGTGAGTAAGAAA+AGG 0.501899 2.3:-26407192 MS.gene063385:CDS
TTCTGCAAATCCACCTGCAC+CGG 0.501939 2.3:+26407712 None:intergenic
GGGAAGTGTGAAATCATTGA+AGG 0.502129 2.3:-26407134 MS.gene063385:CDS
AAGTTATCCGTGAAGGAAAA+GGG 0.506296 2.3:-26407028 MS.gene063385:CDS
CCCAATAACCTCGGCAACAA+CGG 0.513459 2.3:+26407763 None:intergenic
GGTGTCGGCGTTGCTGGTTA+CGG 0.518609 2.3:+26408176 None:intergenic
CTAAAGAAAATCCCATCAAA+AGG 0.519721 2.3:-26408045 MS.gene063385:CDS
GAGAAAGACGGCAGATGTGA+AGG 0.519834 2.3:-26406885 MS.gene063385:CDS
TGAGAATGTTGTTGCTGCGA+TGG 0.520350 2.3:-26407572 MS.gene063385:CDS
GACGGATTATCGTCCGTTTG+AGG 0.522523 2.3:-26407842 MS.gene063385:CDS
TTTGGAGGATAAGTTGGTGA+TGG 0.530137 2.3:-26407416 MS.gene063385:CDS
TGGGACTTGTAGTGTGGTGA+AGG 0.531069 2.3:-26407629 MS.gene063385:CDS
CAAGAGTAAGAAAAGTAAGA+AGG 0.531808 2.3:-26406861 MS.gene063385:CDS
AAGAAGAAGAATAACAAAAG+GGG 0.535687 2.3:-26407001 MS.gene063385:CDS
CATTGAAGGGTTCTGCTAAG+AGG 0.537258 2.3:-26407120 MS.gene063385:CDS
GAGATTGGTGATATCGAGAG+TGG 0.537914 2.3:-26407214 MS.gene063385:CDS
GTTGGTGATGGATGAGAAGA+AGG 0.538960 2.3:-26407404 MS.gene063385:CDS
TGTTAGTGGTGGTGGTGATG+AGG 0.543748 2.3:-26407251 MS.gene063385:CDS
TCAATCTTCAACCTAACATC+CGG 0.551342 2.3:+26407451 None:intergenic
CCATTTGAGAAGAGAGTCTA+CGG 0.552491 2.3:+26408143 None:intergenic
AGAAGAGTAAGAAGAAAGGG+AGG 0.553817 2.3:-26407369 MS.gene063385:CDS
TCGTCTTTGGTGATACGAGA+GGG 0.562374 2.3:+26407931 None:intergenic
AATGTGAATGCTGCAGAAGA+AGG 0.562909 2.3:-26407079 MS.gene063385:CDS
CGGAAATGAATCATTGGTCA+AGG 0.564280 2.3:-26406927 MS.gene063385:CDS
CGTTGTTGCCGAGGTTATTG+GGG 0.570182 2.3:-26407762 MS.gene063385:CDS
GAGGAAGATTCCGGTGCAGG+TGG 0.571715 2.3:-26407722 MS.gene063385:CDS
TTGGTGATATCGAGAGTGGA+GGG 0.571912 2.3:-26407210 MS.gene063385:CDS
CTATTGTGCCGTTGTTGCCG+AGG 0.574937 2.3:-26407771 MS.gene063385:CDS
TGCGATGGAGGGTGTTGTTG+AGG 0.577349 2.3:-26407557 MS.gene063385:CDS
TTCGTCTTTGGTGATACGAG+AGG 0.580043 2.3:+26407930 None:intergenic
GAATAAGAAGTTATCCGTGA+AGG 0.580061 2.3:-26407035 MS.gene063385:CDS
CTAAGAGGAAGAAGAAAGAT+GGG 0.580491 2.3:-26407105 MS.gene063385:CDS
GACTTGTAGTGTGGTGAAGG+TGG 0.580675 2.3:-26407626 MS.gene063385:CDS
GAATCATTGGTCAAGGATGA+GGG 0.583068 2.3:-26406920 MS.gene063385:CDS
GAATGTTGTTGCTGCGATGG+AGG 0.588380 2.3:-26407569 MS.gene063385:CDS
ATTGGTGATATCGAGAGTGG+AGG 0.594236 2.3:-26407211 MS.gene063385:CDS
AACTGCTTCCCCAATAACCT+CGG 0.596591 2.3:+26407754 None:intergenic
TTGGAAGGAGCAGATTGAGA+AGG 0.597099 2.3:-26407683 MS.gene063385:CDS
AATGTTGTTGCTGCGATGGA+GGG 0.600510 2.3:-26407568 MS.gene063385:CDS
AGAAGAAGAATAACAAAAGG+GGG 0.601080 2.3:-26407000 MS.gene063385:CDS
GATGATAGAATGAGTTCAGA+TGG 0.609600 2.3:-26407325 MS.gene063385:CDS
GCTGCGGAGATGAGAGAGTG+AGG 0.618794 2.3:+26407994 None:intergenic
GAGGACTGGGACTTGTAGTG+TGG 0.619046 2.3:-26407635 MS.gene063385:CDS
GGAAGTGTGAAATCATTGAA+GGG 0.619801 2.3:-26407133 MS.gene063385:CDS
TGATATCGAGAGTGGAGGGT+TGG 0.619964 2.3:-26407206 MS.gene063385:CDS
TTTGCAGAAGAAGAATTGGA+AGG 0.627135 2.3:-26407698 MS.gene063385:CDS
TAAGCTTTCGAAGCTCATGA+CGG 0.630267 2.3:-26407860 MS.gene063385:CDS
GTCGGCGTTGCTGGTTACGG+TGG 0.647021 2.3:+26408179 None:intergenic
GAGACACTGTTCCGATGCTG+CGG 0.652900 2.3:+26407978 None:intergenic
TTCGGACAAGAAGAGAAAGA+CGG 0.654441 2.3:-26406897 MS.gene063385:CDS
CTGCGGAGATGAGAGAGTGA+GGG 0.658572 2.3:+26407995 None:intergenic
GAAGAAGAATAACAAAAGGG+GGG 0.703279 2.3:-26406999 MS.gene063385:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAAGAAGAATAACAAAA+GGG - chr2.3:26408034-26408053 MS.gene063385:CDS 20.0%
! AAGAAGAAGAATAACAAAAG+GGG - chr2.3:26408035-26408054 MS.gene063385:CDS 25.0%
! CAAAGAAGAAGAATAACAAA+AGG - chr2.3:26408033-26408052 MS.gene063385:CDS 25.0%
! GATTCATGAGATTAAGTATA+TGG - chr2.3:26407689-26407708 MS.gene063385:CDS 25.0%
!! TTTTGATGGGATTTTCTTTA+GGG + chr2.3:26406992-26407011 None:intergenic 25.0%
AGAAGAAGAATAACAAAAGG+GGG - chr2.3:26408036-26408055 MS.gene063385:CDS 30.0%
AGCTTAAGAATCTTCGAAAT+AGG + chr2.3:26407162-26407181 None:intergenic 30.0%
CAAGAGTAAGAAAAGTAAGA+AGG - chr2.3:26408175-26408194 MS.gene063385:CDS 30.0%
CTAAAGAAAATCCCATCAAA+AGG - chr2.3:26406991-26407010 MS.gene063385:CDS 30.0%
! ATCGATGATGATTTTGTTAG+TGG - chr2.3:26407771-26407790 MS.gene063385:CDS 30.0%
! CTTTTGATGGGATTTTCTTT+AGG + chr2.3:26406993-26407012 None:intergenic 30.0%
!! GTCTTTTCATGTTAAGTTGT+TGG - chr2.3:26407530-26407549 MS.gene063385:CDS 30.0%
!! TTTTAAGAAGAGGAAGATTC+CGG - chr2.3:26407305-26407324 MS.gene063385:CDS 30.0%
AAAAGAGGATTCAAGTGAGT+TGG - chr2.3:26407881-26407900 MS.gene063385:CDS 35.0%
AAAGAGGATTCAAGTGAGTT+GGG - chr2.3:26407882-26407901 MS.gene063385:CDS 35.0%
AAGTTATCCGTGAAGGAAAA+GGG - chr2.3:26408008-26408027 MS.gene063385:CDS 35.0%
AGCTCAGAAGAAAGTTCAAT+CGG - chr2.3:26407128-26407147 MS.gene063385:CDS 35.0%
CGAAGAAGAGTAAGAAGAAA+GGG - chr2.3:26407664-26407683 MS.gene063385:CDS 35.0%
CTAAGAGGAAGAAGAAAGAT+GGG - chr2.3:26407931-26407950 MS.gene063385:CDS 35.0%
GAAGAAAGGAGTGAAAAAAG+AGG - chr2.3:26407866-26407885 MS.gene063385:CDS 35.0%
GAAGAAGAATAACAAAAGGG+GGG - chr2.3:26408037-26408056 MS.gene063385:CDS 35.0%
GAATAAGAAGTTATCCGTGA+AGG - chr2.3:26408001-26408020 MS.gene063385:CDS 35.0%
GATGATAGAATGAGTTCAGA+TGG - chr2.3:26407711-26407730 MS.gene063385:CDS 35.0%
GTGAGTAAGAAAAGGAAGAA+AGG - chr2.3:26407852-26407871 MS.gene063385:CDS 35.0%
GTTTAGCGGAAATGAATCAT+TGG - chr2.3:26408103-26408122 MS.gene063385:CDS 35.0%
TAAGGATTTGGAGGATAAGT+TGG - chr2.3:26407614-26407633 MS.gene063385:CDS 35.0%
TCAATCTTCAACCTAACATC+CGG + chr2.3:26407588-26407607 None:intergenic 35.0%
TGGATTTGCAGAAGAAGAAT+TGG - chr2.3:26407334-26407353 MS.gene063385:CDS 35.0%
TTTGCAGAAGAAGAATTGGA+AGG - chr2.3:26407338-26407357 MS.gene063385:CDS 35.0%
! GATGATGATTTTGTTAGTGG+TGG - chr2.3:26407774-26407793 MS.gene063385:CDS 35.0%
! GGAAGTGTGAAATCATTGAA+GGG - chr2.3:26407903-26407922 MS.gene063385:CDS 35.0%
! TGAGGTTTTACCGAAGAAAT+GGG - chr2.3:26407497-26407516 MS.gene063385:CDS 35.0%
! TTGAGGTTTTACCGAAGAAA+TGG - chr2.3:26407496-26407515 MS.gene063385:CDS 35.0%
!! GATGTTAGGTTGAAGATTGA+GGG - chr2.3:26407588-26407607 MS.gene063385:CDS 35.0%
!! GTCAAAGAGTTTGGGTTTTT+CGG + chr2.3:26406938-26406957 None:intergenic 35.0%
!! GTTGATGATGATAGTGAGAT+TGG - chr2.3:26407807-26407826 MS.gene063385:CDS 35.0%
!!! ATGGGATTTTCTTTAGGGTT+AGG + chr2.3:26406987-26407006 None:intergenic 35.0%
!!! CTTCTGCTTTGTTGTTTTTG+AGG - chr2.3:26407382-26407401 MS.gene063385:CDS 35.0%
!!! CTTTGTTGTTTTTGAGGACT+GGG - chr2.3:26407388-26407407 MS.gene063385:CDS 35.0%
!!! GGAAGCAGTTTTTTAAGAAG+AGG - chr2.3:26407295-26407314 MS.gene063385:CDS 35.0%
!!! TTTTCTTTAGGGTTAGGATG+AGG + chr2.3:26406981-26407000 None:intergenic 35.0%
AATGTGAATGCTGCAGAAGA+AGG - chr2.3:26407957-26407976 MS.gene063385:CDS 40.0%
AGAAGAGTAAGAAGAAAGGG+AGG - chr2.3:26407667-26407686 MS.gene063385:CDS 40.0%
CCATTTGAGAAGAGAGTCTA+CGG + chr2.3:26406896-26406915 None:intergenic 40.0%
CGGAAATGAATCATTGGTCA+AGG - chr2.3:26408109-26408128 MS.gene063385:CDS 40.0%
GAAGTTATCCGTGAAGGAAA+AGG - chr2.3:26408007-26408026 MS.gene063385:CDS 40.0%
GAATCATTGGTCAAGGATGA+GGG - chr2.3:26408116-26408135 MS.gene063385:CDS 40.0%
GCGAAGAAGAGTAAGAAGAA+AGG - chr2.3:26407663-26407682 MS.gene063385:CDS 40.0%
GCTAAGAGGAAGAAGAAAGA+TGG - chr2.3:26407930-26407949 MS.gene063385:CDS 40.0%
TAAGCTTTCGAAGCTCATGA+CGG - chr2.3:26407176-26407195 MS.gene063385:CDS 40.0%
TCGTCTTCGTCAAAGAGTTT+GGG + chr2.3:26406946-26406965 None:intergenic 40.0%
TGAATCATTGGTCAAGGATG+AGG - chr2.3:26408115-26408134 MS.gene063385:CDS 40.0%
TTCGGACAAGAAGAGAAAGA+CGG - chr2.3:26408139-26408158 MS.gene063385:CDS 40.0%
TTCGTCTTCGTCAAAGAGTT+TGG + chr2.3:26406947-26406966 None:intergenic 40.0%
TTTCTTCTGAGCTTCGTCTT+TGG + chr2.3:26407121-26407140 None:intergenic 40.0%
! AACTTCCTTTTCGCCTCAAA+CGG + chr2.3:26407210-26407229 None:intergenic 40.0%
! CTTTGAACCCTTTTCCTTCA+CGG + chr2.3:26408018-26408037 None:intergenic 40.0%
! GATGATTTTGTTAGTGGTGG+TGG - chr2.3:26407777-26407796 MS.gene063385:CDS 40.0%
! GGGAAGTGTGAAATCATTGA+AGG - chr2.3:26407902-26407921 MS.gene063385:CDS 40.0%
!! GAAGAAGTGCTCATGTTTAG+CGG - chr2.3:26408089-26408108 MS.gene063385:CDS 40.0%
!! GATTGAGGGTGTTAAGGATT+TGG - chr2.3:26407602-26407621 MS.gene063385:CDS 40.0%
!! GGATGTTAGGTTGAAGATTG+AGG - chr2.3:26407587-26407606 MS.gene063385:CDS 40.0%
!! GTTGAAGATTGAGGGTGTTA+AGG - chr2.3:26407596-26407615 MS.gene063385:CDS 40.0%
!! TTTGGAGGATAAGTTGGTGA+TGG - chr2.3:26407620-26407639 MS.gene063385:CDS 40.0%
!!! GCTTTGTTGTTTTTGAGGAC+TGG - chr2.3:26407387-26407406 MS.gene063385:CDS 40.0%
AACTGCTTCCCCAATAACCT+CGG + chr2.3:26407285-26407304 None:intergenic 45.0%
AATGTTGTTGCTGCGATGGA+GGG - chr2.3:26407468-26407487 MS.gene063385:CDS 45.0%
AGATGAGAGAGTGAGGGATT+GGG + chr2.3:26407038-26407057 None:intergenic 45.0%
ATTGGTCAAGGATGAGGGTT+CGG - chr2.3:26408121-26408140 MS.gene063385:CDS 45.0%
CATTGAAGGGTTCTGCTAAG+AGG - chr2.3:26407916-26407935 MS.gene063385:CDS 45.0%
CCGTAGACTCTCTTCTCAAA+TGG - chr2.3:26406893-26406912 MS.gene063385:CDS 45.0%
CTAACAACCGCCCATTTCTT+CGG + chr2.3:26407510-26407529 None:intergenic 45.0%
GAAGAATAACAAAAGGGGGG+TGG - chr2.3:26408040-26408059 MS.gene063385:CDS 45.0%
TGAGAATGTTGTTGCTGCGA+TGG - chr2.3:26407464-26407483 MS.gene063385:CDS 45.0%
TTGGAAGGAGCAGATTGAGA+AGG - chr2.3:26407353-26407372 MS.gene063385:CDS 45.0%
! ATTGGTGATATCGAGAGTGG+AGG - chr2.3:26407825-26407844 MS.gene063385:CDS 45.0%
! GAAGGTGGCTAAGTTGAGTA+TGG - chr2.3:26407425-26407444 MS.gene063385:CDS 45.0%
! GAGATTGGTGATATCGAGAG+TGG - chr2.3:26407822-26407841 MS.gene063385:CDS 45.0%
! GAGGGATTGGGATTTTGTGA+GGG + chr2.3:26407026-26407045 None:intergenic 45.0%
! GGTTAACGCGACCTTTTGAT+GGG + chr2.3:26407005-26407024 None:intergenic 45.0%
! GGTTTTACCGAAGAAATGGG+CGG - chr2.3:26407500-26407519 MS.gene063385:CDS 45.0%
! TCGTCTTTGGTGATACGAGA+GGG + chr2.3:26407108-26407127 None:intergenic 45.0%
! TGAGGGATTGGGATTTTGTG+AGG + chr2.3:26407027-26407046 None:intergenic 45.0%
! TTCGTCTTTGGTGATACGAG+AGG + chr2.3:26407109-26407128 None:intergenic 45.0%
! TTGGTGATATCGAGAGTGGA+GGG - chr2.3:26407826-26407845 MS.gene063385:CDS 45.0%
!! GAGGGTTGGTGAGTAAGAAA+AGG - chr2.3:26407844-26407863 MS.gene063385:CDS 45.0%
!! GTTGGTGATGGATGAGAAGA+AGG - chr2.3:26407632-26407651 MS.gene063385:CDS 45.0%
!! TCTTGCTTTGCCGGTTTATC+AGG - chr2.3:26407557-26407576 MS.gene063385:CDS 45.0%
!! TGAGGGTGTTAAGGATTTGG+AGG - chr2.3:26407605-26407624 MS.gene063385:CDS 45.0%
ATCAGGCTGTTCCGGATGTT+AGG - chr2.3:26407574-26407593 MS.gene063385:CDS 50.0%
CCCAATAACCTCGGCAACAA+CGG + chr2.3:26407276-26407295 None:intergenic 50.0%
CCGTTGTTGCCGAGGTTATT+GGG - chr2.3:26407273-26407292 MS.gene063385:CDS 50.0%
CGAAGAAATGGGCGGTTGTT+AGG - chr2.3:26407508-26407527 MS.gene063385:CDS 50.0%
CGTTGTTGCCGAGGTTATTG+GGG - chr2.3:26407274-26407293 MS.gene063385:CDS 50.0%
GAATGTTGTTGCTGCGATGG+AGG - chr2.3:26407467-26407486 MS.gene063385:CDS 50.0%
GACTTGTAGTGTGGTGAAGG+TGG - chr2.3:26407410-26407429 MS.gene063385:CDS 50.0%
GAGAAAGACGGCAGATGTGA+AGG - chr2.3:26408151-26408170 MS.gene063385:CDS 50.0%
GAGATGAGAGAGTGAGGGAT+TGG + chr2.3:26407039-26407058 None:intergenic 50.0%
GTTGGAGTCTCTTGCTTTGC+CGG - chr2.3:26407548-26407567 MS.gene063385:CDS 50.0%
TCCGGAACAGCCTGATAAAC+CGG + chr2.3:26407570-26407589 None:intergenic 50.0%
TGATATCGAGAGTGGAGGGT+TGG - chr2.3:26407830-26407849 MS.gene063385:CDS 50.0%
TGGGACTTGTAGTGTGGTGA+AGG - chr2.3:26407407-26407426 MS.gene063385:CDS 50.0%
TTCTGCAAATCCACCTGCAC+CGG + chr2.3:26407327-26407346 None:intergenic 50.0%
! AGAGTCTACGGCTTTTGCGA+CGG + chr2.3:26406884-26406903 None:intergenic 50.0%
! ATCGTCCGTTTGAGGCGAAA+AGG - chr2.3:26407202-26407221 MS.gene063385:CDS 50.0%
! GGGTTAACGCGACCTTTTGA+TGG + chr2.3:26407006-26407025 None:intergenic 50.0%
!! GACGGATTATCGTCCGTTTG+AGG - chr2.3:26407194-26407213 MS.gene063385:CDS 50.0%
!! TGTTAGTGGTGGTGGTGATG+AGG - chr2.3:26407785-26407804 MS.gene063385:CDS 50.0%
CTCTCTCATCTCCGCAGCAT+CGG - chr2.3:26407047-26407066 MS.gene063385:CDS 55.0%
CTGCGGAGATGAGAGAGTGA+GGG + chr2.3:26407044-26407063 None:intergenic 55.0%
GAAGAGGAAGATTCCGGTGC+AGG - chr2.3:26407311-26407330 MS.gene063385:CDS 55.0%
GAGACACTGTTCCGATGCTG+CGG + chr2.3:26407061-26407080 None:intergenic 55.0%
GAGGACTGGGACTTGTAGTG+TGG - chr2.3:26407401-26407420 MS.gene063385:CDS 55.0%
GCCGTTGTTGCCGAGGTTAT+TGG - chr2.3:26407272-26407291 MS.gene063385:CDS 55.0%
! CTATTGTGCCGTTGTTGCCG+AGG - chr2.3:26407265-26407284 MS.gene063385:CDS 55.0%
! GCCGGTTTATCAGGCTGTTC+CGG - chr2.3:26407566-26407585 MS.gene063385:CDS 55.0%
! TACGGCTTTTGCGACGGTGT+CGG + chr2.3:26406878-26406897 None:intergenic 55.0%
!! TGCGATGGAGGGTGTTGTTG+AGG - chr2.3:26407479-26407498 MS.gene063385:CDS 55.0%
CAAAAGGGGGGTGGCTGAGT+TGG - chr2.3:26408049-26408068 MS.gene063385:CDS 60.0%
GAGGAAGATTCCGGTGCAGG+TGG - chr2.3:26407314-26407333 MS.gene063385:CDS 60.0%
GCTGCGGAGATGAGAGAGTG+AGG + chr2.3:26407045-26407064 None:intergenic 60.0%
!! GGTGTCGGCGTTGCTGGTTA+CGG + chr2.3:26406863-26406882 None:intergenic 60.0%
! GTCGGCGTTGCTGGTTACGG+TGG + chr2.3:26406860-26406879 None:intergenic 65.0%
!! TGCGACGGTGTCGGCGTTGC+TGG + chr2.3:26406869-26406888 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 26406853 26408205 26406853 ID=MS.gene063385
chr2.3 mRNA 26406853 26408205 26406853 ID=MS.gene063385.t1;Parent=MS.gene063385
chr2.3 exon 26406853 26408205 26406853 ID=MS.gene063385.t1.exon1;Parent=MS.gene063385.t1
chr2.3 CDS 26406853 26408205 26406853 ID=cds.MS.gene063385.t1;Parent=MS.gene063385.t1
Gene Sequence

>MS.gene063385

ATGGCCACCGTAACCAGCAACGCCGACACCGTCGCAAAAGCCGTAGACTCTCTTCTCAAATGGCGTAAATCACGATTAGAAACCGAAAAACCCAAACTCTTTGACGAAGACGAAGAATTTGTTTACCTCATCCTAACCCTAAAGAAAATCCCATCAAAAGGTCGCGTTAACCCTCACAAAATCCCAATCCCTCACTCTCTCATCTCCGCAGCATCGGAACAGTGTCTCATCATCGATGACAGAGCTAACAAACCCTCTCGTATCACCAAAGACGAAGCTCAGAAGAAAGTTCAATCGGAATCAATTCCTATTTCGAAGATTCTTAAGCTTTCGAAGCTCATGACGGATTATCGTCCGTTTGAGGCGAAAAGGAAGTTATGTAATTCTTATGATTTGTTTTTTGCTGATAAAGCTATTGTGCCGTTGTTGCCGAGGTTATTGGGGAAGCAGTTTTTTAAGAAGAGGAAGATTCCGGTGCAGGTGGATTTGCAGAAGAAGAATTGGAAGGAGCAGATTGAGAAGGCTTGTTCTTCTGCTTTGTTGTTTTTGAGGACTGGGACTTGTAGTGTGGTGAAGGTGGCTAAGTTGAGTATGGAGAGAGATGAGATTGTTGAGAATGTTGTTGCTGCGATGGAGGGTGTTGTTGAGGTTTTACCGAAGAAATGGGCGGTTGTTAGGTCTTTTCATGTTAAGTTGTTGGAGTCTCTTGCTTTGCCGGTTTATCAGGCTGTTCCGGATGTTAGGTTGAAGATTGAGGGTGTTAAGGATTTGGAGGATAAGTTGGTGATGGATGAGAAGAAGGTGAAAGACGCGAAGAAGAGTAAGAAGAAAGGGAGGATTCATGAGATTAAGTATATGGATGATAGAATGAGTTCAGATGGTGATGATCGCAGTGTTGATATTGATCTTGATGATGATATCGATGATGATTTTGTTAGTGGTGGTGGTGATGAGGTTGATGATGATAGTGAGATTGGTGATATCGAGAGTGGAGGGTTGGTGAGTAAGAAAAGGAAGAAAGGAGTGAAAAAAGAGGATTCAAGTGAGTTGGGAAGTGTGAAATCATTGAAGGGTTCTGCTAAGAGGAAGAAGAAAGATGGGTTGAATGTGAATGCTGCAGAAGAAGGTTCAATTGAGAAGAGTGAAAAGAATAAGAAGTTATCCGTGAAGGAAAAGGGTTCAAAGAAGAAGAATAACAAAAGGGGGGTGGCTGAGTTGGCTGTGAAACATGCTCTTGAAGAAGTGCTCATGTTTAGCGGAAATGAATCATTGGTCAAGGATGAGGGTTCGGACAAGAAGAGAAAGACGGCAGATGTGAAGGTCAAGAGTAAGAAAAGTAAGAAGGCTGTATGA
Protein sequence

>MS.gene063385.t1

MATVTSNADTVAKAVDSLLKWRKSRLETEKPKLFDEDEEFVYLILTLKKIPSKGRVNPHKIPIPHSLISAASEQCLIIDDRANKPSRITKDEAQKKVQSESIPISKILKLSKLMTDYRPFEAKRKLCNSYDLFFADKAIVPLLPRLLGKQFFKKRKIPVQVDLQKKNWKEQIEKACSSALLFLRTGTCSVVKVAKLSMERDEIVENVVAAMEGVVEVLPKKWAVVRSFHVKLLESLALPVYQAVPDVRLKIEGVKDLEDKLVMDEKKVKDAKKSKKKGRIHEIKYMDDRMSSDGDDRSVDIDLDDDIDDDFVSGGGDEVDDDSEIGDIESGGLVSKKRKKGVKKEDSSELGSVKSLKGSAKRKKKDGLNVNAAEEGSIEKSEKNKKLSVKEKGSKKKNNKRGVAELAVKHALEEVLMFSGNESLVKDEGSDKKRKTADVKVKSKKSKKAV