AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene94588

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94588.t1 MTR_2g064460 64.563 412 77 8 1 343 1 412 3.12e-156 450
MS.gene94588.t1 MTR_2g064460 54.255 94 26 2 243 319 331 424 4.28e-11 65.1
MS.gene94588.t1 MTR_2g064460 64.563 412 77 8 1 343 1 412 4.70e-156 450
MS.gene94588.t1 MTR_2g028790 67.105 76 25 0 364 439 80 155 4.35e-27 108
MS.gene94588.t1 MTR_4g083490 61.842 76 29 0 364 439 78 153 1.46e-23 99.0
MS.gene94588.t1 MTR_1g047710 51.316 76 37 0 364 439 24 99 8.91e-19 83.2
MS.gene94588.t1 MTR_4g022470 51.316 76 37 0 364 439 22 97 1.11e-18 82.0
MS.gene94588.t1 MTR_4g022570 53.947 76 35 0 364 439 76 151 1.32e-18 84.7
MS.gene94588.t1 MTR_1g047720 36.957 138 58 2 364 472 76 213 1.71e-18 84.7
MS.gene94588.t1 MTR_7g058640 36.154 130 82 1 309 437 20 149 7.12e-18 82.0
MS.gene94588.t1 MTR_7g058640 37.008 127 79 1 312 437 23 149 7.43e-18 82.8
MS.gene94588.t1 MTR_7g058900 51.316 76 37 0 364 439 76 151 2.86e-17 81.3
MS.gene94588.t1 MTR_7g058640 50.704 71 35 0 367 437 1 71 2.92e-17 78.6
MS.gene94588.t1 MTR_2g436870 37.241 145 62 1 357 472 69 213 9.58e-17 79.7
MS.gene94588.t1 MTR_1g111890 42.553 94 35 2 366 440 78 171 4.83e-13 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94588.t1 AT3G58660 54.618 249 96 4 10 244 28 273 1.33e-87 275
MS.gene94588.t1 AT2G42650 51.406 249 104 4 10 244 8 253 1.89e-80 254
MS.gene94588.t1 AT1G06380 51.261 238 102 4 7 233 19 253 1.07e-71 228
MS.gene94588.t1 AT1G04750 60.526 76 30 0 364 439 76 151 3.20e-22 95.1
MS.gene94588.t1 AT2G33120 60.526 76 30 0 364 439 76 151 4.35e-22 95.1
MS.gene94588.t1 AT2G33120 60.526 76 30 0 364 439 84 159 5.02e-22 95.1
MS.gene94588.t1 AT2G33110 55.556 81 36 0 364 444 76 156 1.27e-21 92.8
MS.gene94588.t1 AT1G04760 59.211 76 31 0 364 439 76 151 1.33e-21 93.6
MS.gene94588.t1 AT1G04760 59.211 76 31 0 364 439 76 151 1.33e-21 93.6
MS.gene94588.t1 AT1G04750 60.274 73 29 0 367 439 1 73 1.72e-21 90.9
MS.gene94588.t1 AT1G04750 60.274 73 29 0 367 439 1 73 1.72e-21 90.9
MS.gene94588.t1 AT1G04750 60.274 73 29 0 367 439 1 73 1.72e-21 90.9
MS.gene94588.t1 AT2G33110 55.556 81 36 0 364 444 76 156 2.89e-21 92.4
MS.gene94588.t1 AT2G32670 58.442 77 32 0 364 440 141 217 4.06e-21 93.6
MS.gene94588.t1 AT4G15780 50.649 77 38 0 364 440 77 153 1.52e-15 75.1
MS.gene94588.t1 AT3G54300 41.489 94 36 2 366 440 78 171 1.88e-11 64.7
MS.gene94588.t1 AT3G54300 41.489 94 36 2 366 440 78 171 1.88e-11 64.7
MS.gene94588.t1 AT3G54300 41.489 94 36 2 366 440 78 171 1.88e-11 64.7

Find 105 sgRNAs with CRISPR-Local

Find 333 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAGCCTTAGCAAGGAATT+TGG 0.184733 2.4:+15325664 MS.gene94588:CDS
TCTTGCTTTGCCAGTTTATC+AGG 0.211931 2.4:+15322915 MS.gene94588:CDS
TGCATTGGTAATTGTGTTAA+TGG 0.245417 2.4:+15326909 MS.gene94588:CDS
CTTCGAAAGCTTAAGAATCT+TGG 0.256967 2.4:-15322519 None:intergenic
TGTTGCCGAACCGAAGTTAT+TGG 0.263656 2.4:+15322630 MS.gene94588:CDS
TTCTTTCAGGCACAAGCTTT+TGG 0.271887 2.4:+15326850 MS.gene94588:intron
GTTGCCGAACCGAAGTTATT+GGG 0.279338 2.4:+15322631 MS.gene94588:CDS
CTGTAGACTCTCTTCTAAAA+TGG 0.308647 2.4:+15322246 MS.gene94588:CDS
TGGATTTGAAGAAGAAGAAT+TGG 0.309942 2.4:+15322692 MS.gene94588:CDS
TTTCTTCTGAGCTTCGTCTT+TGG 0.324123 2.4:-15322471 None:intergenic
GAGATGAGAGAGTGAGGGAT+TGG 0.338164 2.4:-15322389 None:intergenic
TCGTCTTCATCGAAGAGTTT+TGG 0.338969 2.4:-15322296 None:intergenic
GCCAGTTTATCAGGCTGTTC+CGG 0.347110 2.4:+15322924 MS.gene94588:CDS
CCAAATCCAGAAATGCAAAA+AGG 0.362626 2.4:+15323410 MS.gene94588:CDS
TCCGGAACAGCCTGATAAAC+TGG 0.367543 2.4:-15322925 None:intergenic
AGCTTAAGAATCTTGGAAAT+AGG 0.369091 2.4:-15322512 None:intergenic
ATCAGGCTGTTCCGGATGTT+AGG 0.369646 2.4:+15322932 MS.gene94588:CDS
GTTGGTGGTTACGGCGGCCA+TGG 0.379927 2.4:-15322204 None:intergenic
GTGATACGAGAGGGTTTGTT+AGG 0.381661 2.4:-15322449 None:intergenic
ACCGACTTTATATCTGAATA+TGG 0.387130 2.4:+15325613 MS.gene94588:CDS
TCTATACAGTTTAAAGTTGA+AGG 0.388368 2.4:+15325762 MS.gene94588:intron
ACAGCCTTAGCAAGGAATTT+GGG 0.389860 2.4:+15325665 MS.gene94588:CDS
AGATGAGAGAGTGAGGGATT+GGG 0.395609 2.4:-15322388 None:intergenic
TTATAAGAAGAGGAAGATTC+CGG 0.399305 2.4:+15322663 MS.gene94588:CDS
GAAGGTGGCTAAGTTGAGTA+TGG 0.403885 2.4:+15322783 MS.gene94588:CDS
GGAATTATTGGTCAAGGATG+AGG 0.421855 2.4:+15323431 MS.gene94588:CDS
GAAGTACTGTAGTGATCATC+AGG 0.437949 2.4:+15325792 MS.gene94588:CDS
TTGGTGGTTACGGCGGCCAT+GGG 0.447546 2.4:-15322203 None:intergenic
ATCGTCCGTTTGAGGCGAAA+AGG 0.448339 2.4:+15322555 MS.gene94588:CDS
GGATGTTAGGTTGAAGATTG+AGG 0.450663 2.4:+15322945 MS.gene94588:CDS
GTGAGTAAGAAGAGGAAGAA+AGG 0.462622 2.4:+15323171 MS.gene94588:CDS
ATTGGTCAAGGATGAGGGTT+CGG 0.470051 2.4:+15323437 MS.gene94588:CDS
TTCTTCAAATCCACCTGCAC+CGG 0.471376 2.4:-15322682 None:intergenic
GGAGTTGTAGAAGCCTTCTC+AGG 0.472037 2.4:-15325637 None:intergenic
CAAAATGTACAAAATGCATA+TGG 0.474956 2.4:-15326938 None:intergenic
GAAGAGGAAGATTCCGGTGC+AGG 0.476004 2.4:+15322669 MS.gene94588:CDS
GGCGACAAGGCTGGTTGCAT+TGG 0.476823 2.4:+15326894 MS.gene94588:CDS
AATTCCTTGCTAAGGCTGTA+AGG 0.480563 2.4:-15325661 None:intergenic
GGTGTCTGAGTTGGTGGTTA+CGG 0.483488 2.4:-15322213 None:intergenic
GAGGAAGAAGAAAGATGGGT+TGG 0.485173 2.4:+15323254 MS.gene94588:CDS
CTTGGAAATAGGAATCGATT+CGG 0.488700 2.4:-15322501 None:intergenic
TGCAACGGTGTCTGAGTTGG+TGG 0.488725 2.4:-15322219 None:intergenic
GCTAAGAGGAAGAAGAAAGA+TGG 0.489873 2.4:+15323249 MS.gene94588:CDS
GATGTTAGGTTGAAGATTGA+GGG 0.491728 2.4:+15322946 MS.gene94588:CDS
AAGGATGAGGGTTCGGACTT+CGG 0.497087 2.4:+15323444 MS.gene94588:CDS
CTTCCCCAATAACTTCGGTT+CGG 0.502292 2.4:-15322635 None:intergenic
GACGGATTATCGTCCGTTTG+AGG 0.508582 2.4:+15322547 MS.gene94588:CDS
TGGATACATGGCGACAAGGC+TGG 0.510237 2.4:+15326885 MS.gene94588:CDS
CTCTCTCATCTCTGCAGCGT+CGG 0.514431 2.4:+15322400 MS.gene94588:CDS
GATGAGCGAGCTTGCTAAGG+AGG 0.523131 2.4:+15325819 MS.gene94588:CDS
AATACCCAAATTCCTTGCTA+AGG 0.523408 2.4:-15325669 None:intergenic
GAAGTCCTCGGCGAAGGAAG+GGG 0.524847 2.4:+15323326 MS.gene94588:CDS
AGAAGTCCTCGGCGAAGGAA+GGG 0.525674 2.4:+15323325 MS.gene94588:CDS
TGAGAATGCTGTTGCTGCGA+TGG 0.527239 2.4:+15322822 MS.gene94588:CDS
CATCGAAGGGTTCTGCTAAG+AGG 0.527839 2.4:+15323235 MS.gene94588:CDS
GATGTGAATGCCGCAGAAGA+TGG 0.529935 2.4:+15323276 MS.gene94588:CDS
TACTCGCTCAAGAAAGGTCA+AGG 0.530808 2.4:-15325587 None:intergenic
GGTCTTTACTCGCTCAAGAA+AGG 0.534750 2.4:-15325593 None:intergenic
TGAGATGAGCGAGCTTGCTA+AGG 0.537749 2.4:+15325816 MS.gene94588:CDS
GAGAAAGACGGCGGATGTGA+AGG 0.537853 2.4:+15323474 MS.gene94588:CDS
AACTGCTTCCCCAATAACTT+CGG 0.539668 2.4:-15322640 None:intergenic
TGGGACTTGTAGTGCGGTGA+AGG 0.540711 2.4:+15322765 MS.gene94588:CDS
TGAAATTGAGAGTGGAGGAT+TGG 0.546452 2.4:+15323149 MS.gene94588:intron
TTTGAAGAAGAAGAATTGGA+AGG 0.548475 2.4:+15322696 MS.gene94588:CDS
ATTGGTAATTGTGTTAATGG+TGG 0.550004 2.4:+15326912 MS.gene94588:CDS
TCAATCTTCAACCTAACATC+CGG 0.551342 2.4:-15322943 None:intergenic
AAGAAGTCCTCGGCGAAGGA+AGG 0.555055 2.4:+15323324 MS.gene94588:CDS
TCGTCTTTGGTGATACGAGA+GGG 0.562374 2.4:-15322458 None:intergenic
GAGGATTGGTGAGTAAGAAG+AGG 0.568656 2.4:+15323163 MS.gene94588:CDS
GAGGAAGATTCCGGTGCAGG+TGG 0.571715 2.4:+15322672 MS.gene94588:CDS
GAATTATTGGTCAAGGATGA+GGG 0.574785 2.4:+15323432 MS.gene94588:CDS
TTCGTCTTTGGTGATACGAG+AGG 0.580043 2.4:-15322459 None:intergenic
CTAAGAGGAAGAAGAAAGAT+GGG 0.580491 2.4:+15323250 MS.gene94588:CDS
GGGAAGTGTGAAATCATCGA+AGG 0.582487 2.4:+15323221 MS.gene94588:CDS
TAAGCTTTCGAAGCTAATGA+CGG 0.585095 2.4:+15322529 MS.gene94588:CDS
GAATGCTGTTGCTGCGATGG+AGG 0.585897 2.4:+15322825 MS.gene94588:CDS
GCTGCAGAGATGAGAGAGTG+AGG 0.587934 2.4:-15322395 None:intergenic
AAAAGAGGATTCTAGTGACA+AGG 0.589102 2.4:+15323200 MS.gene94588:CDS
AAAGACTTGGTATGGATACA+TGG 0.590260 2.4:+15326873 MS.gene94588:CDS
TTGGAAGGAGCAGATTGAGA+AGG 0.597099 2.4:+15322711 MS.gene94588:CDS
ACGGCGGATGTGAAGGTCAA+GGG 0.600388 2.4:+15323481 MS.gene94588:CDS
ACCATATTCAGATATAAAGT+CGG 0.600585 2.4:-15325614 None:intergenic
ATCTGAATATGGTCCTGAGA+AGG 0.601642 2.4:+15325624 MS.gene94588:CDS
TCCTCCTTACAGCCTTAGCA+AGG 0.602135 2.4:+15325657 MS.gene94588:CDS
GACTTGTAGTGCGGTGAAGG+TGG 0.604348 2.4:+15322768 MS.gene94588:CDS
TAACTTCGGTTCGGCAACAA+CGG 0.604603 2.4:-15322626 None:intergenic
AAGTCCTCGGCGAAGGAAGG+GGG 0.607674 2.4:+15323327 MS.gene94588:CDS
TTGCCGAACCGAAGTTATTG+GGG 0.607725 2.4:+15322632 MS.gene94588:CDS
AATGCTGTTGCTGCGATGGA+GGG 0.608967 2.4:+15322826 MS.gene94588:CDS
GTCTGAGTTGGTGGTTACGG+CGG 0.609564 2.4:-15322210 None:intergenic
CTGCAGAGATGAGAGAGTGA+GGG 0.617297 2.4:-15322394 None:intergenic
TGCGATGGAGGGTGTTGTCG+AGG 0.617796 2.4:+15322837 MS.gene94588:CDS
GACGGCGGATGTGAAGGTCA+AGG 0.621289 2.4:+15323480 MS.gene94588:CDS
CACAATCAAACCATCTTCTG+CGG 0.623901 2.4:-15323286 None:intergenic
TGTTAGGTTGAAGATTGAGG+GGG 0.626587 2.4:+15322948 MS.gene94588:CDS
ATGTTAGGTTGAAGATTGAG+GGG 0.627796 2.4:+15322947 MS.gene94588:CDS
AAAGAGGATTCTAGTGACAA+GGG 0.638066 2.4:+15323201 MS.gene94588:CDS
GGAAGTGTGAAATCATCGAA+GGG 0.639293 2.4:+15323222 MS.gene94588:CDS
GGTATGGATACATGGCGACA+AGG 0.649997 2.4:+15326881 MS.gene94588:CDS
ACTCGCTCAAGAAAGGTCAA+GGG 0.657921 2.4:-15325586 None:intergenic
GAGGACTGGGACTTGTAGTG+CGG 0.677894 2.4:+15322759 MS.gene94588:CDS
TCCTTGCTAAGGCTGTAAGG+AGG 0.685723 2.4:-15325658 None:intergenic
TTCGGACAAGAAGAGAAAGA+CGG 0.689408 2.4:+15323462 MS.gene94588:CDS
GATGATGAAATTGAGAGTGG+AGG 0.713918 2.4:+15323144 MS.gene94588:intron
GGACAAGAAGAGAAAGACGG+CGG 0.741878 2.4:+15323465 MS.gene94588:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATATTTACATAGTTTA+GGG + chr2.4:15326806-15326825 MS.gene94588:intron 10.0%
!! TTATTATATTTACATAGTTT+AGG + chr2.4:15326805-15326824 MS.gene94588:intron 10.0%
!!! AAATTTATTTTGTATTGTAT+TGG + chr2.4:15324803-15324822 MS.gene94588:intron 10.0%
!!! ATTTTTGTTAAATAATTTAG+TGG - chr2.4:15326131-15326150 None:intergenic 10.0%
!!! TATTGTAAAAGATTTTTATT+TGG + chr2.4:15326572-15326591 MS.gene94588:intron 10.0%
!!! TATTTATTTTGTTTTGTTTT+CGG + chr2.4:15323626-15323645 MS.gene94588:intron 10.0%
!! AAAAGAAAAAAAAAGAAGAA+AGG - chr2.4:15325513-15325532 None:intergenic 15.0%
!! ATTAAACTGTGAATAATAAA+CGG - chr2.4:15326246-15326265 None:intergenic 15.0%
!! TTTCTATATTTACATAGTTT+AGG - chr2.4:15326664-15326683 None:intergenic 15.0%
!!! TTAATTTTGTATTTACATTG+TGG - chr2.4:15325374-15325393 None:intergenic 15.0%
!!! TTTGTTTTGAAAAAAAACTA+AGG - chr2.4:15325968-15325987 None:intergenic 15.0%
!!! TTTGTTTTTTTTTTTCTTTC+AGG + chr2.4:15326837-15326856 MS.gene94588:intron 15.0%
!!! TTTTTCAAAACAAAGTTAAT+AGG + chr2.4:15325974-15325993 MS.gene94588:intron 15.0%
!! TAAACCACATATAATACAAT+TGG - chr2.4:15324382-15324401 None:intergenic 20.0%
!! TATATACTCAAAATGAGAAT+AGG - chr2.4:15324716-15324735 None:intergenic 20.0%
!! TCATTTGAATATTAGTTGAA+GGG + chr2.4:15326316-15326335 MS.gene94588:intron 20.0%
!! TTCATTTGAATATTAGTTGA+AGG + chr2.4:15326315-15326334 MS.gene94588:intron 20.0%
!! TTCTTATATTTAAATCCAGA+GGG - chr2.4:15326186-15326205 None:intergenic 20.0%
!!! AAAATTGATGATGATTTCAA+AGG - chr2.4:15324968-15324987 None:intergenic 20.0%
!!! AAACAAAGTTAATAGGTTTT+TGG + chr2.4:15325981-15326000 MS.gene94588:intron 20.0%
!!! ATTTTGAGTATATATTTTGG+TGG + chr2.4:15324722-15324741 MS.gene94588:intron 20.0%
!!! CATTTTATAATTACTGTTAG+TGG - chr2.4:15323932-15323951 None:intergenic 20.0%
!!! CTCATTTTGAGTATATATTT+TGG + chr2.4:15324719-15324738 MS.gene94588:intron 20.0%
!!! TTTTGGGGAATATATTATTA+TGG + chr2.4:15326342-15326361 MS.gene94588:intron 20.0%
!!! TTTTTCTTTTTCTGATACTT+TGG - chr2.4:15324905-15324924 None:intergenic 20.0%
! AATGGATCATATACTACATT+AGG - chr2.4:15326449-15326468 None:intergenic 25.0%
! ACCATATTCAGATATAAAGT+CGG - chr2.4:15325617-15325636 None:intergenic 25.0%
! AGAGAAAATGAAGCAAATAA+GGG - chr2.4:15324481-15324500 None:intergenic 25.0%
! AGAGAAGAAAAATGACATAA+CGG + chr2.4:15323353-15323372 MS.gene94588:CDS 25.0%
! AGATTAAGTATATGGATGAT+AGG + chr2.4:15323055-15323074 MS.gene94588:intron 25.0%
! ATAGTCATCTAAATATGAGA+AGG - chr2.4:15324326-15324345 None:intergenic 25.0%
! ATGGATCATATACTACATTA+GGG - chr2.4:15326448-15326467 None:intergenic 25.0%
! CAAAATGTACAAAATGCATA+TGG - chr2.4:15326941-15326960 None:intergenic 25.0%
! CATGACAAAAAAAGTTGTAA+AGG + chr2.4:15325870-15325889 MS.gene94588:CDS 25.0%
! CTCATAAGAGAAAGAAAATA+GGG - chr2.4:15324552-15324571 None:intergenic 25.0%
! GAAAAAAAACTAAGGTTCAT+GGG - chr2.4:15325960-15325979 None:intergenic 25.0%
! GAAATGCAAAAAGGAATTAT+TGG + chr2.4:15323419-15323438 MS.gene94588:CDS 25.0%
! GATTCATGAGATTAAGTATA+TGG + chr2.4:15323047-15323066 MS.gene94588:intron 25.0%
! TCATAAGAGAAAGAAAATAG+GGG - chr2.4:15324551-15324570 None:intergenic 25.0%
! TCTTATATTTAAATCCAGAG+GGG - chr2.4:15326185-15326204 None:intergenic 25.0%
! TGAAAAAAAACTAAGGTTCA+TGG - chr2.4:15325961-15325980 None:intergenic 25.0%
! TTCAACTTTAAACTGTATAG+AGG - chr2.4:15325763-15325782 None:intergenic 25.0%
! TTGTCCAATTGTATTATATG+TGG + chr2.4:15324375-15324394 MS.gene94588:intron 25.0%
!! ATAATTCCTTTTTGCATTTC+TGG - chr2.4:15323419-15323438 None:intergenic 25.0%
!! CTTTTATATTCTGTCAATGT+CGG + chr2.4:15323759-15323778 MS.gene94588:intron 25.0%
!! TCTATACAGTTTAAAGTTGA+AGG + chr2.4:15325762-15325781 MS.gene94588:intron 25.0%
!! TGTAGCTTTTCTACTAAATT+TGG - chr2.4:15325050-15325069 None:intergenic 25.0%
!! TTTAGAATGAATATGCTGAT+GGG + chr2.4:15324288-15324307 MS.gene94588:intron 25.0%
!! TTTTGATGGGATTTTCTTTA+GGG - chr2.4:15322345-15322364 None:intergenic 25.0%
!!! AATGGATTAAACAATCGTAA+TGG - chr2.4:15324250-15324269 None:intergenic 25.0%
!!! ATTAGTTGAAGGGTATTTTT+GGG + chr2.4:15326326-15326345 MS.gene94588:intron 25.0%
!!! GTCATGGTTTGTTTATATTT+GGG + chr2.4:15326373-15326392 MS.gene94588:intron 25.0%
!!! TATTAGTTGAAGGGTATTTT+TGG + chr2.4:15326325-15326344 MS.gene94588:intron 25.0%
!!! TGGTCATTTTGACATTATTT+TGG + chr2.4:15324742-15324761 MS.gene94588:intron 25.0%
!!! TGTCATGGTTTGTTTATATT+TGG + chr2.4:15326372-15326391 MS.gene94588:intron 25.0%
AAAAAGTTGTAAAGGTAGAG+TGG + chr2.4:15325878-15325897 MS.gene94588:intron 30.0%
AAAAGTTGTAAAGGTAGAGT+GGG + chr2.4:15325879-15325898 MS.gene94588:intron 30.0%
AAGTTACTGTAATCACAATC+TGG - chr2.4:15323868-15323887 None:intergenic 30.0%
AATCTATGAACATGCATGAT+AGG - chr2.4:15324155-15324174 None:intergenic 30.0%
AATGAAGCAAATAAGGGAAA+AGG - chr2.4:15324475-15324494 None:intergenic 30.0%
ACAAGACTTATTGTTTATGG+TGG - chr2.4:15325170-15325189 None:intergenic 30.0%
ACCTGATTGTATTAGTAGTT+AGG + chr2.4:15326541-15326560 MS.gene94588:intron 30.0%
AGAAGAAAAATGACATAACG+GGG + chr2.4:15323355-15323374 MS.gene94588:CDS 30.0%
AGCTTAAGAATCTTGGAAAT+AGG - chr2.4:15322515-15322534 None:intergenic 30.0%
ATAAAGTGGAAACACAAATG+AGG - chr2.4:15324451-15324470 None:intergenic 30.0%
ATAGTAGGAACATTACATCA+AGG + chr2.4:15326049-15326068 MS.gene94588:intron 30.0%
ATGAAGCAAATAAGGGAAAA+GGG - chr2.4:15324474-15324493 None:intergenic 30.0%
ATTTCACTTCACACAGTTAA+AGG - chr2.4:15326691-15326710 None:intergenic 30.0%
CAAAAAGAAAAAGAAGTCCT+CGG + chr2.4:15323314-15323333 MS.gene94588:CDS 30.0%
CAAAAAGGAATTATTGGTCA+AGG + chr2.4:15323425-15323444 MS.gene94588:CDS 30.0%
CAATCTTATCCCACTAATTA+GGG + chr2.4:15325423-15325442 MS.gene94588:intron 30.0%
GAGAAGAAAAATGACATAAC+GGG + chr2.4:15323354-15323373 MS.gene94588:CDS 30.0%
GAGAGAAAATGAAGCAAATA+AGG - chr2.4:15324482-15324501 None:intergenic 30.0%
GCTCATAAGAGAAAGAAAAT+AGG - chr2.4:15324553-15324572 None:intergenic 30.0%
GCTTGAAGTATACAAATGTA+CGG + chr2.4:15323793-15323812 MS.gene94588:intron 30.0%
TAGTAGGAACATTACATCAA+GGG + chr2.4:15326050-15326069 MS.gene94588:intron 30.0%
TATTATGGTGAAATGTGTCA+TGG + chr2.4:15326357-15326376 MS.gene94588:intron 30.0%
TCAATCTTATCCCACTAATT+AGG + chr2.4:15325422-15325441 MS.gene94588:intron 30.0%
TCACAAAATGACCTTCAAAA+GGG + chr2.4:15324855-15324874 MS.gene94588:intron 30.0%
TCCCTAACATCTTAATAACA+GGG - chr2.4:15326727-15326746 None:intergenic 30.0%
TCCCTGTTATTAAGATGTTA+GGG + chr2.4:15326723-15326742 MS.gene94588:intron 30.0%
TCCTAACTACTAATACAATC+AGG - chr2.4:15326545-15326564 None:intergenic 30.0%
TCTACTAAATTTGGACATGT+AGG - chr2.4:15325041-15325060 None:intergenic 30.0%
TCTCTTATGAGCTAAATTTG+TGG + chr2.4:15324561-15324580 MS.gene94588:intron 30.0%
TGCACAAGACTTATTGTTTA+TGG - chr2.4:15325173-15325192 None:intergenic 30.0%
TGGATTTGAAGAAGAAGAAT+TGG + chr2.4:15322692-15322711 MS.gene94588:CDS 30.0%
TTAGAATTTATTGCTTGACG+TGG + chr2.4:15323562-15323581 MS.gene94588:intron 30.0%
TTATAAGAAGAGGAAGATTC+CGG + chr2.4:15322663-15322682 MS.gene94588:CDS 30.0%
TTTGAAGAAGAAGAATTGGA+AGG + chr2.4:15322696-15322715 MS.gene94588:CDS 30.0%
! ACATGGAATTAGAACTTTTG+AGG + chr2.4:15325222-15325241 MS.gene94588:intron 30.0%
! ACCGACTTTATATCTGAATA+TGG + chr2.4:15325613-15325632 MS.gene94588:CDS 30.0%
! AGTTTAGGATCTATCTTAGA+GGG - chr2.4:15326649-15326668 None:intergenic 30.0%
! ATTGGTAATTGTGTTAATGG+TGG + chr2.4:15326912-15326931 MS.gene94588:CDS 30.0%
! CAATAGCAGAGATTTTTGAA+TGG - chr2.4:15324268-15324287 None:intergenic 30.0%
! CACATGCTACAACTTTTATT+TGG - chr2.4:15326008-15326027 None:intergenic 30.0%
! CTTTTGATGGGATTTTCTTT+AGG - chr2.4:15322346-15322365 None:intergenic 30.0%
! GGTTTGTTTATATTTGGGTT+CGG + chr2.4:15326378-15326397 MS.gene94588:intron 30.0%
! GTTTAGAATGAATATGCTGA+TGG + chr2.4:15324287-15324306 MS.gene94588:intron 30.0%
! TAGTTTAGGATCTATCTTAG+AGG - chr2.4:15326650-15326669 None:intergenic 30.0%
! TGCATTGGTAATTGTGTTAA+TGG + chr2.4:15326909-15326928 MS.gene94588:CDS 30.0%
!! ACTCTAGTTAAGCTTTAGAA+TGG + chr2.4:15323679-15323698 MS.gene94588:intron 30.0%
!! GTAATGGACATAAAAAACAC+AGG - chr2.4:15324234-15324253 None:intergenic 30.0%
!! GTCTTTTCATGTTAAGTTGT+TGG + chr2.4:15322888-15322907 MS.gene94588:CDS 30.0%
!! TGATTCATTTTGATGCTACA+AGG + chr2.4:15324769-15324788 MS.gene94588:intron 30.0%
!!! ATCGAAGAGTTTTGGTTTTT+CGG - chr2.4:15322291-15322310 None:intergenic 30.0%
!!! GCAATGGCAAATTTTGTTTT+CGG + chr2.4:15323591-15323610 MS.gene94588:intron 30.0%
!!! GTGAGTTTGTGTTGTTATTT+TGG + chr2.4:15325725-15325744 MS.gene94588:intron 30.0%
!!! TTAGTTGAAGGGTATTTTTG+GGG + chr2.4:15326327-15326346 MS.gene94588:intron 30.0%
AAAAGAGGATTCTAGTGACA+AGG + chr2.4:15323200-15323219 MS.gene94588:CDS 35.0%
AAAGAGGATTCTAGTGACAA+GGG + chr2.4:15323201-15323220 MS.gene94588:CDS 35.0%
AATACCCAAATTCCTTGCTA+AGG - chr2.4:15325672-15325691 None:intergenic 35.0%
ACATGAATCAAAAGACCCTA+AGG + chr2.4:15325452-15325471 MS.gene94588:intron 35.0%
AGAAAAACAGACACAACCTT+AGG - chr2.4:15325471-15325490 None:intergenic 35.0%
ATAAGGGAAAAGGGATAAAG+TGG - chr2.4:15324465-15324484 None:intergenic 35.0%
ATTGTAGCATGCTAATGTAC+TGG + chr2.4:15326159-15326178 MS.gene94588:intron 35.0%
CAAGGGAAAGAAAAGTAAGA+AGG + chr2.4:15323498-15323517 MS.gene94588:intron 35.0%
CACCTAAAAAGGTGAATTAC+TGG + chr2.4:15326105-15326124 MS.gene94588:intron 35.0%
CCAAATCCAGAAATGCAAAA+AGG + chr2.4:15323410-15323429 MS.gene94588:CDS 35.0%
CTAAGAGGAAGAAGAAAGAT+GGG + chr2.4:15323250-15323269 MS.gene94588:CDS 35.0%
CTTCGAAAGCTTAAGAATCT+TGG - chr2.4:15322522-15322541 None:intergenic 35.0%
CTTGGAAATAGGAATCGATT+CGG - chr2.4:15322504-15322523 None:intergenic 35.0%
GAAAAACAGACACAACCTTA+GGG - chr2.4:15325470-15325489 None:intergenic 35.0%
GAAGAAAGGAGTGAAAAAAG+AGG + chr2.4:15323185-15323204 MS.gene94588:CDS 35.0%
GAATTATTGGTCAAGGATGA+GGG + chr2.4:15323432-15323451 MS.gene94588:CDS 35.0%
GGAAGAAGAGTAAGAAGAAA+GGG + chr2.4:15323022-15323041 MS.gene94588:intron 35.0%
GTCACAAAATGACCTTCAAA+AGG + chr2.4:15324854-15324873 MS.gene94588:intron 35.0%
GTCCCTAACATCTTAATAAC+AGG - chr2.4:15326728-15326747 None:intergenic 35.0%
GTCCCTGTTATTAAGATGTT+AGG + chr2.4:15326722-15326741 MS.gene94588:intron 35.0%
TAAAGCTTAGCTCAGATAGT+AGG + chr2.4:15326034-15326053 MS.gene94588:intron 35.0%
TAAGAGAAAGAAAATAGGGG+AGG - chr2.4:15324548-15324567 None:intergenic 35.0%
TAAGCTTTCGAAGCTAATGA+CGG + chr2.4:15322529-15322548 MS.gene94588:CDS 35.0%
TATCTGAGCTAAGCTTTACT+GGG - chr2.4:15326032-15326051 None:intergenic 35.0%
TCAATCTTCAACCTAACATC+CGG - chr2.4:15322946-15322965 None:intergenic 35.0%
TCCAAAGTACATGTCAAACA+TGG + chr2.4:15325205-15325224 MS.gene94588:intron 35.0%
TCCATGTTTGACATGTACTT+TGG - chr2.4:15325209-15325228 None:intergenic 35.0%
TTAAGATGTTAGGGACTACA+TGG + chr2.4:15326732-15326751 MS.gene94588:intron 35.0%
TTACTGTTAGTGGTAGATTG+TGG - chr2.4:15323922-15323941 None:intergenic 35.0%
! AAAGACTTGGTATGGATACA+TGG + chr2.4:15326873-15326892 MS.gene94588:CDS 35.0%
! AAATTTGAAGCATCATGGTC+TGG + chr2.4:15325246-15325265 MS.gene94588:intron 35.0%
! AGATAGTTCTATGCTAGACA+TGG - chr2.4:15325310-15325329 None:intergenic 35.0%
! CTGTAGACTCTCTTCTAAAA+TGG + chr2.4:15322246-15322265 MS.gene94588:CDS 35.0%
! CTTCATTTTCTCTCAATCTC+GGG + chr2.4:15324488-15324507 MS.gene94588:intron 35.0%
! GAGGAAAATTTGAAGCATCA+TGG + chr2.4:15325241-15325260 MS.gene94588:intron 35.0%
! GATGATGATGAAATTGAGAG+TGG + chr2.4:15323141-15323160 MS.gene94588:intron 35.0%
! GCTTCATTTTCTCTCAATCT+CGG + chr2.4:15324487-15324506 MS.gene94588:intron 35.0%
! TGTTTATATTTGGGTTCGGA+GGG + chr2.4:15326382-15326401 MS.gene94588:intron 35.0%
! TTGTGCTGTTAAGTTTAAGC+TGG + chr2.4:15325703-15325722 MS.gene94588:intron 35.0%
! TTGTTTATATTTGGGTTCGG+AGG + chr2.4:15326381-15326400 MS.gene94588:intron 35.0%
!! ATGTTAGGTTGAAGATTGAG+GGG + chr2.4:15322947-15322966 MS.gene94588:CDS 35.0%
!! CCTTTTTGCATTTCTGGATT+TGG - chr2.4:15323413-15323432 None:intergenic 35.0%
!! GATGTTAGGTTGAAGATTGA+GGG + chr2.4:15322946-15322965 MS.gene94588:CDS 35.0%
!! GGAAGCAGTTTTATAAGAAG+AGG + chr2.4:15322653-15322672 MS.gene94588:CDS 35.0%
!! TGTTTTGAACTAGAAGCAAC+TGG - chr2.4:15323968-15323987 None:intergenic 35.0%
!! TTCATTTTGATGCTACAAGG+AGG + chr2.4:15324772-15324791 MS.gene94588:intron 35.0%
!!! ATGGGATTTTCTTTAGGGTT+AGG - chr2.4:15322340-15322359 None:intergenic 35.0%
!!! CATTGTTGTTTTTGAGGACT+GGG + chr2.4:15322746-15322765 MS.gene94588:CDS 35.0%
!!! GCTCAGATTTTTGAGGTTAA+AGG + chr2.4:15325844-15325863 MS.gene94588:CDS 35.0%
!!! GTTCTGCATTGTTGTTTTTG+AGG + chr2.4:15322740-15322759 MS.gene94588:CDS 35.0%
!!! TTTTCTTTAGGGTTAGGAGT+AGG - chr2.4:15322334-15322353 None:intergenic 35.0%
AACTGCTTCCCCAATAACTT+CGG - chr2.4:15322643-15322662 None:intergenic 40.0%
AATTCCTTGCTAAGGCTGTA+AGG - chr2.4:15325664-15325683 None:intergenic 40.0%
ACAGCCTTAGCAAGGAATTT+GGG + chr2.4:15325665-15325684 MS.gene94588:CDS 40.0%
AGAAGAGTAAGAAGAAAGGG+AGG + chr2.4:15323025-15323044 MS.gene94588:intron 40.0%
AGGAACATTACATCAAGGGT+CGG + chr2.4:15326054-15326073 MS.gene94588:intron 40.0%
AGTGGAAACACAAATGAGGT+AGG - chr2.4:15324447-15324466 None:intergenic 40.0%
ATACAATCAGGTGTGCTACA+TGG - chr2.4:15326533-15326552 None:intergenic 40.0%
ATCTGAATATGGTCCTGAGA+AGG + chr2.4:15325624-15325643 MS.gene94588:CDS 40.0%
ATGAGAAGAAGGTGAAAGAC+GGG + chr2.4:15323001-15323020 MS.gene94588:intron 40.0%
ATGTACCTGACCCTAATTAG+TGG - chr2.4:15325436-15325455 None:intergenic 40.0%
ATTAATGCACTTCCTGGAGT+AGG - chr2.4:15324997-15325016 None:intergenic 40.0%
CACAATCAAACCATCTTCTG+CGG - chr2.4:15323289-15323308 None:intergenic 40.0%
CCACAGACAGAAATCAAACA+CGG + chr2.4:15324025-15324044 MS.gene94588:intron 40.0%
CCTATCCATTACAGCAACAT+TGG - chr2.4:15324061-15324080 None:intergenic 40.0%
CCTCACACATTCACCTAAAA+AGG + chr2.4:15326094-15326113 MS.gene94588:intron 40.0%
CGTCTTAATGACACCAAAGT+GGG - chr2.4:15326476-15326495 None:intergenic 40.0%
CTAAATTTGTGGCGATTCCA+TGG + chr2.4:15324572-15324591 MS.gene94588:intron 40.0%
CTAACAATCCCCCATTTCTT+CGG - chr2.4:15322868-15322887 None:intergenic 40.0%
CTATCTGAGCTAAGCTTTAC+TGG - chr2.4:15326033-15326052 None:intergenic 40.0%
GATGAGAAGAAGGTGAAAGA+CGG + chr2.4:15323000-15323019 MS.gene94588:intron 40.0%
GATGATGAAATTGAGAGTGG+AGG + chr2.4:15323144-15323163 MS.gene94588:intron 40.0%
GCTAAGAGGAAGAAGAAAGA+TGG + chr2.4:15323249-15323268 MS.gene94588:CDS 40.0%
GGAATTATTGGTCAAGGATG+AGG + chr2.4:15323431-15323450 MS.gene94588:CDS 40.0%
GGGAAGAAGAGTAAGAAGAA+AGG + chr2.4:15323021-15323040 MS.gene94588:intron 40.0%
GTGAGTAAGAAGAGGAAGAA+AGG + chr2.4:15323171-15323190 MS.gene94588:CDS 40.0%
GTGGAAACACAAATGAGGTA+GGG - chr2.4:15324446-15324465 None:intergenic 40.0%
TAAGGAATTGGAGGAGAAGT+TGG + chr2.4:15322972-15322991 MS.gene94588:intron 40.0%
TACAGCCTTAGCAAGGAATT+TGG + chr2.4:15325664-15325683 MS.gene94588:CDS 40.0%
TCTTGCCAATGTTGCTGTAA+TGG + chr2.4:15324053-15324072 MS.gene94588:intron 40.0%
TCTTGCTTTGCCAGTTTATC+AGG + chr2.4:15322915-15322934 MS.gene94588:CDS 40.0%
TGAAATTGAGAGTGGAGGAT+TGG + chr2.4:15323149-15323168 MS.gene94588:intron 40.0%
TGATCCATTGAATCCCACTT+TGG + chr2.4:15326460-15326479 MS.gene94588:intron 40.0%
TGTACCTGACCCTAATTAGT+GGG - chr2.4:15325435-15325454 None:intergenic 40.0%
TTAATGCACTTCCTGGAGTA+GGG - chr2.4:15324996-15325015 None:intergenic 40.0%
TTATCCCACTAATTAGGGTC+AGG + chr2.4:15325428-15325447 MS.gene94588:intron 40.0%
TTCGGACAAGAAGAGAAAGA+CGG + chr2.4:15323462-15323481 MS.gene94588:CDS 40.0%
TTTCTTCTGAGCTTCGTCTT+TGG - chr2.4:15322474-15322493 None:intergenic 40.0%
! AACTTCCTTTTCGCCTCAAA+CGG - chr2.4:15322563-15322582 None:intergenic 40.0%
! AATCTCGGGAATCCTTTTTC+GGG + chr2.4:15324502-15324521 MS.gene94588:intron 40.0%
! ACTCCAGGAAGTGCATTAAT+TGG + chr2.4:15324997-15325016 MS.gene94588:intron 40.0%
! AGAGTCTACAGCTTTTGCAA+CGG - chr2.4:15322237-15322256 None:intergenic 40.0%
! AGGTTTTACCGAAGAAATGG+GGG + chr2.4:15322857-15322876 MS.gene94588:CDS 40.0%
! CAATCTCGGGAATCCTTTTT+CGG + chr2.4:15324501-15324520 MS.gene94588:intron 40.0%
! CGAGGTTTTACCGAAGAAAT+GGG + chr2.4:15322855-15322874 MS.gene94588:CDS 40.0%
! CTCCAGGAAGTGCATTAATT+GGG + chr2.4:15324998-15325017 MS.gene94588:intron 40.0%
! GAAAAATGACATAACGGGGT+TGG + chr2.4:15323359-15323378 MS.gene94588:CDS 40.0%
! GAGGTTTTACCGAAGAAATG+GGG + chr2.4:15322856-15322875 MS.gene94588:CDS 40.0%
! GATGATAGGATGAGTTCTGA+TGG + chr2.4:15323069-15323088 MS.gene94588:intron 40.0%
! GGAAGTGTGAAATCATCGAA+GGG + chr2.4:15323222-15323241 MS.gene94588:CDS 40.0%
! GGCCAGTAATTCACCTTTTT+AGG - chr2.4:15326110-15326129 None:intergenic 40.0%
! TCGAGGTTTTACCGAAGAAA+TGG + chr2.4:15322854-15322873 MS.gene94588:CDS 40.0%
! TCGTCTTCATCGAAGAGTTT+TGG - chr2.4:15322299-15322318 None:intergenic 40.0%
! TGCTCACTCTAAGAAGAGAA+TGG + chr2.4:15324607-15324626 MS.gene94588:intron 40.0%
! TTCTTTCAGGCACAAGCTTT+TGG + chr2.4:15326850-15326869 MS.gene94588:intron 40.0%
! TTTTCTACCCTTGTGTTGTG+CGG + chr2.4:15324415-15324434 MS.gene94588:intron 40.0%
!! CACAAGCTTTTGGAAAGACT+TGG + chr2.4:15326860-15326879 MS.gene94588:CDS 40.0%
!! CCAATGTTGCTGTAATGGAT+AGG + chr2.4:15324058-15324077 MS.gene94588:intron 40.0%
!! GAAGTACTGTAGTGATCATC+AGG + chr2.4:15325792-15325811 MS.gene94588:CDS 40.0%
!! GCTTTTGGAAAGACTTGGTA+TGG + chr2.4:15326865-15326884 MS.gene94588:CDS 40.0%
!! GGATGTTAGGTTGAAGATTG+AGG + chr2.4:15322945-15322964 MS.gene94588:CDS 40.0%
!! TCTGTCTGTGGCAGTTTTAT+AGG - chr2.4:15324016-15324035 None:intergenic 40.0%
!! TCTTGATGACGACATTGATG+AGG + chr2.4:15323116-15323135 MS.gene94588:intron 40.0%
!! TGTTAGGTTGAAGATTGAGG+GGG + chr2.4:15322948-15322967 MS.gene94588:CDS 40.0%
!! TTGACATGTACTTTGGAGTG+TGG - chr2.4:15325202-15325221 None:intergenic 40.0%
!!! CCTTTTTAGGTGAATGTGTG+AGG - chr2.4:15326097-15326116 None:intergenic 40.0%
!!! GCATTGTTGTTTTTGAGGAC+TGG + chr2.4:15322745-15322764 MS.gene94588:CDS 40.0%
ACTCGCTCAAGAAAGGTCAA+GGG - chr2.4:15325589-15325608 None:intergenic 45.0%
AGATGAGAGAGTGAGGGATT+GGG - chr2.4:15322391-15322410 None:intergenic 45.0%
ATTGGTCAAGGATGAGGGTT+CGG + chr2.4:15323437-15323456 MS.gene94588:CDS 45.0%
ATTTCTCCACAGCCCGAAAA+AGG - chr2.4:15324517-15324536 None:intergenic 45.0%
CGAAGAAATGGGGGATTGTT+AGG + chr2.4:15322866-15322885 MS.gene94588:CDS 45.0%
CTCCCAATTAATGCACTTCC+TGG - chr2.4:15325003-15325022 None:intergenic 45.0%
CTTCCCCAATAACTTCGGTT+CGG - chr2.4:15322638-15322657 None:intergenic 45.0%
GAACATTACATCAAGGGTCG+GGG + chr2.4:15326056-15326075 MS.gene94588:intron 45.0%
GACACCAAAGTGGGATTCAA+TGG - chr2.4:15326467-15326486 None:intergenic 45.0%
GAGGAAGAAGAAAGATGGGT+TGG + chr2.4:15323254-15323273 MS.gene94588:CDS 45.0%
GATTGAGGGGGTTAAGGAAT+TGG + chr2.4:15322960-15322979 MS.gene94588:intron 45.0%
GCGTCTTAATGACACCAAAG+TGG - chr2.4:15326477-15326496 None:intergenic 45.0%
GCTACATGGCACACTCTAAT+TGG - chr2.4:15326519-15326538 None:intergenic 45.0%
GGAACATTACATCAAGGGTC+GGG + chr2.4:15326055-15326074 MS.gene94588:intron 45.0%
GGGAAACTGTGTTAATCCTC+TGG - chr2.4:15325569-15325588 None:intergenic 45.0%
GGTCTTTACTCGCTCAAGAA+AGG - chr2.4:15325596-15325615 None:intergenic 45.0%
GTCAACAGCCAGAGATCATA+CGG - chr2.4:15323524-15323543 None:intergenic 45.0%
GTCATTAAGACGCCAATGGT+AGG + chr2.4:15326484-15326503 MS.gene94588:intron 45.0%
GTTGAAGATTGAGGGGGTTA+AGG + chr2.4:15322954-15322973 MS.gene94588:intron 45.0%
GTTGCCGAACCGAAGTTATT+GGG + chr2.4:15322631-15322650 MS.gene94588:CDS 45.0%
TAAGAAGGCCGTATGATCTC+TGG + chr2.4:15323513-15323532 MS.gene94588:intron 45.0%
TACTCGCTCAAGAAAGGTCA+AGG - chr2.4:15325590-15325609 None:intergenic 45.0%
TGACCTTCAAAAGGGAGTCA+AGG + chr2.4:15324863-15324882 MS.gene94588:intron 45.0%
TGGATAGGCATCCAATTGAG+AGG + chr2.4:15324073-15324092 MS.gene94588:intron 45.0%
TGGTGAATGTCACCTACCAT+TGG - chr2.4:15326499-15326518 None:intergenic 45.0%
TGTTGCCGAACCGAAGTTAT+TGG + chr2.4:15322630-15322649 MS.gene94588:CDS 45.0%
TTCTTCAAATCCACCTGCAC+CGG - chr2.4:15322685-15322704 None:intergenic 45.0%
TTGCCGAACCGAAGTTATTG+GGG + chr2.4:15322632-15322651 MS.gene94588:CDS 45.0%
TTGGAAGGAGCAGATTGAGA+AGG + chr2.4:15322711-15322730 MS.gene94588:CDS 45.0%
! AATTTTCCATGCCCTACTCC+AGG + chr2.4:15324982-15325001 MS.gene94588:intron 45.0%
! CCGTGTTTGATTTCTGTCTG+TGG - chr2.4:15324028-15324047 None:intergenic 45.0%
! GAAGGTGGCTAAGTTGAGTA+TGG + chr2.4:15322783-15322802 MS.gene94588:CDS 45.0%
! GAGGATTGGTGAGTAAGAAG+AGG + chr2.4:15323163-15323182 MS.gene94588:CDS 45.0%
! GAGGGATTGGGATTTTGTGA+GGG - chr2.4:15322379-15322398 None:intergenic 45.0%
! GGAGGAAGCTCAGATTTTTG+AGG + chr2.4:15325837-15325856 MS.gene94588:CDS 45.0%
! GGGAAGTGTGAAATCATCGA+AGG + chr2.4:15323221-15323240 MS.gene94588:CDS 45.0%
! GGTTAACGCGAGCTTTTGAT+GGG - chr2.4:15322358-15322377 None:intergenic 45.0%
! GTGAATGTGTGAGGTGTCTA+GGG - chr2.4:15326088-15326107 None:intergenic 45.0%
! GTGATACGAGAGGGTTTGTT+AGG - chr2.4:15322452-15322471 None:intergenic 45.0%
! GTTCCTTGACTCCCTTTTGA+AGG - chr2.4:15324869-15324888 None:intergenic 45.0%
! GTTGGTGAAGGATGAGAAGA+AGG + chr2.4:15322990-15323009 MS.gene94588:intron 45.0%
! TCGTCTTTGGTGATACGAGA+GGG - chr2.4:15322461-15322480 None:intergenic 45.0%
! TGAGGGATTGGGATTTTGTG+AGG - chr2.4:15322380-15322399 None:intergenic 45.0%
! TTCGTCTTTGGTGATACGAG+AGG - chr2.4:15322462-15322481 None:intergenic 45.0%
! TTTTGCAACGGTGTCTGAGT+TGG - chr2.4:15322225-15322244 None:intergenic 45.0%
!! ATTGGAGGAGAAGTTGGTGA+AGG + chr2.4:15322978-15322997 MS.gene94588:intron 45.0%
!! TAACTTCGGTTCGGCAACAA+CGG - chr2.4:15322629-15322648 None:intergenic 45.0%
!! TGGTGTCATTAAGACGCCAA+TGG + chr2.4:15326480-15326499 MS.gene94588:intron 45.0%
AAGGATGAGGGTTCGGACTT+CGG + chr2.4:15323444-15323463 MS.gene94588:CDS 50.0%
AATGCTGTTGCTGCGATGGA+GGG + chr2.4:15322826-15322845 MS.gene94588:CDS 50.0%
ATCAGGCTGTTCCGGATGTT+AGG + chr2.4:15322932-15322951 MS.gene94588:CDS 50.0%
CATCGAAGGGTTCTGCTAAG+AGG + chr2.4:15323235-15323254 MS.gene94588:CDS 50.0%
CCAATTGAGAGGCGATGATG+AGG + chr2.4:15324084-15324103 MS.gene94588:intron 50.0%
CCTCATCATCGCCTCTCAAT+TGG - chr2.4:15324087-15324106 None:intergenic 50.0%
CTGCAGAGATGAGAGAGTGA+GGG - chr2.4:15322397-15322416 None:intergenic 50.0%
GAAAAAGAAGTCCTCGGCGA+AGG + chr2.4:15323320-15323339 MS.gene94588:CDS 50.0%
GAGATGAGAGAGTGAGGGAT+TGG - chr2.4:15322392-15322411 None:intergenic 50.0%
GATGTGAATGCCGCAGAAGA+TGG + chr2.4:15323276-15323295 MS.gene94588:CDS 50.0%
GCCAGTTTATCAGGCTGTTC+CGG + chr2.4:15322924-15322943 MS.gene94588:CDS 50.0%
GGACAAGAAGAGAAAGACGG+CGG + chr2.4:15323465-15323484 MS.gene94588:CDS 50.0%
GGAGTTGTAGAAGCCTTCTC+AGG - chr2.4:15325640-15325659 None:intergenic 50.0%
GGTATGGATACATGGCGACA+AGG + chr2.4:15326881-15326900 MS.gene94588:CDS 50.0%
TCCGGAACAGCCTGATAAAC+TGG - chr2.4:15322928-15322947 None:intergenic 50.0%
TCCTCCTTACAGCCTTAGCA+AGG + chr2.4:15325657-15325676 MS.gene94588:CDS 50.0%
TCCTTGCTAAGGCTGTAAGG+AGG - chr2.4:15325661-15325680 None:intergenic 50.0%
TGAGAATGCTGTTGCTGCGA+TGG + chr2.4:15322822-15322841 MS.gene94588:CDS 50.0%
TGAGGGGGTTAAGGAATTGG+AGG + chr2.4:15322963-15322982 MS.gene94588:intron 50.0%
TGATCTCTGGCTGTTGACGT+TGG + chr2.4:15323526-15323545 MS.gene94588:intron 50.0%
TGTGGCGATTCCATGGTGTT+CGG + chr2.4:15324579-15324598 MS.gene94588:intron 50.0%
TTGAGAGGCGATGATGAGGT+CGG + chr2.4:15324088-15324107 MS.gene94588:intron 50.0%
! ATCGTCCGTTTGAGGCGAAA+AGG + chr2.4:15322555-15322574 MS.gene94588:CDS 50.0%
! GCATACTGTGTTGTTGCCAG+AGG + chr2.4:15325550-15325569 MS.gene94588:intron 50.0%
! GGGTTAACGCGAGCTTTTGA+TGG - chr2.4:15322359-15322378 None:intergenic 50.0%
! GGTGAATGTGTGAGGTGTCT+AGG - chr2.4:15326089-15326108 None:intergenic 50.0%
!! GACGGATTATCGTCCGTTTG+AGG + chr2.4:15322547-15322566 MS.gene94588:CDS 50.0%
!! GGTGTCTGAGTTGGTGGTTA+CGG - chr2.4:15322216-15322235 None:intergenic 50.0%
!! TGAGATGAGCGAGCTTGCTA+AGG + chr2.4:15325816-15325835 MS.gene94588:CDS 50.0%
AAGAAGTCCTCGGCGAAGGA+AGG + chr2.4:15323324-15323343 MS.gene94588:CDS 55.0%
ACGGCGGATGTGAAGGTCAA+GGG + chr2.4:15323481-15323500 MS.gene94588:CDS 55.0%
AGAAGTCCTCGGCGAAGGAA+GGG + chr2.4:15323325-15323344 MS.gene94588:CDS 55.0%
CTCTCTCATCTCTGCAGCGT+CGG + chr2.4:15322400-15322419 MS.gene94588:CDS 55.0%
GAAGAGGAAGATTCCGGTGC+AGG + chr2.4:15322669-15322688 MS.gene94588:CDS 55.0%
GAATGCTGTTGCTGCGATGG+AGG + chr2.4:15322825-15322844 MS.gene94588:CDS 55.0%
GACTTGTAGTGCGGTGAAGG+TGG + chr2.4:15322768-15322787 MS.gene94588:CDS 55.0%
GAGAAAGACGGCGGATGTGA+AGG + chr2.4:15323474-15323493 MS.gene94588:CDS 55.0%
GAGGACTGGGACTTGTAGTG+CGG + chr2.4:15322759-15322778 MS.gene94588:CDS 55.0%
GCTGCAGAGATGAGAGAGTG+AGG - chr2.4:15322398-15322417 None:intergenic 55.0%
GGTGAAGCCGCACAACACAA+GGG - chr2.4:15324425-15324444 None:intergenic 55.0%
GTGGCGATTCCATGGTGTTC+GGG + chr2.4:15324580-15324599 MS.gene94588:intron 55.0%
TGGATACATGGCGACAAGGC+TGG + chr2.4:15326885-15326904 MS.gene94588:CDS 55.0%
TGGCGATTCCATGGTGTTCG+GGG + chr2.4:15324581-15324600 MS.gene94588:intron 55.0%
TGGGACTTGTAGTGCGGTGA+AGG + chr2.4:15322765-15322784 MS.gene94588:CDS 55.0%
! CTTGACGTGGCTCTGTGCAA+TGG + chr2.4:15323575-15323594 MS.gene94588:intron 55.0%
! TGCAACGGTGTCTGAGTTGG+TGG - chr2.4:15322222-15322241 None:intergenic 55.0%
! TGCTAATGTACTGGCCCCTC+TGG + chr2.4:15326168-15326187 MS.gene94588:intron 55.0%
!! GATGAGCGAGCTTGCTAAGG+AGG + chr2.4:15325819-15325838 MS.gene94588:CDS 55.0%
!! GTCTGAGTTGGTGGTTACGG+CGG - chr2.4:15322213-15322232 None:intergenic 55.0%
!!! GGGAATCCTTTTTCGGGCTG+TGG + chr2.4:15324508-15324527 MS.gene94588:intron 55.0%
AAGTCCTCGGCGAAGGAAGG+GGG + chr2.4:15323327-15323346 MS.gene94588:CDS 60.0%
GAAGTCCTCGGCGAAGGAAG+GGG + chr2.4:15323326-15323345 MS.gene94588:CDS 60.0%
GACGGCGGATGTGAAGGTCA+AGG + chr2.4:15323480-15323499 MS.gene94588:CDS 60.0%
GAGGAAGATTCCGGTGCAGG+TGG + chr2.4:15322672-15322691 MS.gene94588:CDS 60.0%
GCACTTCCTGGAGTAGGGCA+TGG - chr2.4:15324991-15325010 None:intergenic 60.0%
GGGTGAAGCCGCACAACACA+AGG - chr2.4:15324426-15324445 None:intergenic 60.0%
! GGCGACAAGGCTGGTTGCAT+TGG + chr2.4:15326894-15326913 MS.gene94588:CDS 60.0%
!! TGCGATGGAGGGTGTTGTCG+AGG + chr2.4:15322837-15322856 MS.gene94588:CDS 60.0%
GAGCACGACCCCGAACACCA+TGG - chr2.4:15324592-15324611 None:intergenic 65.0%
TGAACCCCCTTCCTTCGCCG+AGG - chr2.4:15323334-15323353 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 15322206 15326975 15322206 ID=MS.gene94588
chr2.4 mRNA 15322206 15326975 15322206 ID=MS.gene94588.t1;Parent=MS.gene94588
chr2.4 exon 15322206 15322579 15322206 ID=MS.gene94588.t1.exon1;Parent=MS.gene94588.t1
chr2.4 CDS 15322206 15322579 15322206 ID=cds.MS.gene94588.t1;Parent=MS.gene94588.t1
chr2.4 exon 15322618 15322969 15322618 ID=MS.gene94588.t1.exon2;Parent=MS.gene94588.t1
chr2.4 CDS 15322618 15322969 15322618 ID=cds.MS.gene94588.t1;Parent=MS.gene94588.t1
chr2.4 exon 15323159 15323511 15323159 ID=MS.gene94588.t1.exon3;Parent=MS.gene94588.t1
chr2.4 CDS 15323159 15323511 15323159 ID=cds.MS.gene94588.t1;Parent=MS.gene94588.t1
chr2.4 exon 15325570 15325686 15325570 ID=MS.gene94588.t1.exon4;Parent=MS.gene94588.t1
chr2.4 CDS 15325570 15325686 15325570 ID=cds.MS.gene94588.t1;Parent=MS.gene94588.t1
chr2.4 exon 15325771 15325891 15325771 ID=MS.gene94588.t1.exon5;Parent=MS.gene94588.t1
chr2.4 CDS 15325771 15325891 15325771 ID=cds.MS.gene94588.t1;Parent=MS.gene94588.t1
chr2.4 exon 15326859 15326975 15326859 ID=MS.gene94588.t1.exon6;Parent=MS.gene94588.t1
chr2.4 CDS 15326859 15326975 15326859 ID=cds.MS.gene94588.t1;Parent=MS.gene94588.t1
Gene Sequence

>MS.gene94588

ATGGCCGCCGTAACCACCAACTCAGACACCGTTGCAAAAGCTGTAGACTCTCTTCTAAAATGGCGAAAATCTCGATTAGAAACCGAAAAACCAAAACTCTTCGATGAAGACGAAGAATACGTCTACCTACTCCTAACCCTAAAGAAAATCCCATCAAAAGCTCGCGTTAACCCTCACAAAATCCCAATCCCTCACTCTCTCATCTCTGCAGCGTCGGAACAGTGTCTCATCATCGATGACAGACCTAACAAACCCTCTCGTATCACCAAAGACGAAGCTCAGAAGAAAATTCAATCCGAATCGATTCCTATTTCCAAGATTCTTAAGCTTTCGAAGCTAATGACGGATTATCGTCCGTTTGAGGCGAAAAGGAAGTTATGTAATTCTTATGATTTGTTTCTTGCTGATAAAGCTATTGTGCCGTTGTTGCCGAACCGAAGTTATTGGGGAAGCAGTTTTATAAGAAGAGGAAGATTCCGGTGCAGGTGGATTTGAAGAAGAAGAATTGGAAGGAGCAGATTGAGAAGGCTTGTTGTTCTGCATTGTTGTTTTTGAGGACTGGGACTTGTAGTGCGGTGAAGGTGGCTAAGTTGAGTATGGAGAGAGATGAGATTGTTGAGAATGCTGTTGCTGCGATGGAGGGTGTTGTCGAGGTTTTACCGAAGAAATGGGGGATTGTTAGGTCTTTTCATGTTAAGTTGTTGGAGTCTCTTGCTTTGCCAGTTTATCAGGCTGTTCCGGATGTTAGGTTGAAGATTGAGGGGGTTAAGGAATTGGAGGAGAAGTTGGTGAAGGATGAGAAGAAGGTGAAAGACGGGAAGAAGAGTAAGAAGAAAGGGAGGATTCATGAGATTAAGTATATGGATGATAGGATGAGTTCTGATGGTGATGATCGCAGTGTTGATATTGATCTTGATGACGACATTGATGAGGTTGATGATGATGAAATTGAGAGTGGAGGATTGGTGAGTAAGAAGAGGAAGAAAGGAGTGAAAAAAGAGGATTCTAGTGACAAGGGAAGTGTGAAATCATCGAAGGGTTCTGCTAAGAGGAAGAAGAAAGATGGGTTGGATGTGAATGCCGCAGAAGATGGTTTGATTGTGAAGAGCAAAAAGAAAAAGAAGTCCTCGGCGAAGGAAGGGGGTTCAGAGAAGAAAAATGACATAACGGGGTTGGCTGTAAAATTTGCTCTTGAAGAAATGATCCAAATCCAGAAATGCAAAAAGGAATTATTGGTCAAGGATGAGGGTTCGGACTTCGGACAAGAAGAGAAAGACGGCGGATGTGAAGGTCAAGGGAAAGAAAAGTAAGAAGGCCGTATGATCTCTGGCTGTTGACGTTGGAGAGATTTTGTTGTTAGAATTTATTGCTTGACGTGGCTCTGTGCAATGGCAAATTTTGTTTTCGGAGAGTATTATCATATTTATTTTGTTTTGTTTTCGGTTACAACGATGTTTACTAATTCAAACGTGTACTCTAGTTAAGCTTTAGAATGGTTCTCTATTCGCAAAACTCAACATTGTTTCTCATTTCACAATGATATTAATTTTATTCTTTTATATTCTGTCAATGTCGGATATATAGATTGCTTGAAGTATACAAATGTACGGTTGTTTCTGTTTATATTTTTTGTTTTTGCTTTTAATTTCAAAACTGTCACCAGATTGTGATTACAGTAACTTAATTAGTATAACAGTGTCTGTGACTCTGTAACCACAATCTACCACTAACAGTAATTATAAAATGCAAATTGTTAAAGCCAGTTGCTTCTAGTTCAAAACATGAAATTGAAGATAATTCTTCTGAACCTATAAAACTGCCACAGACAGAAATCAAACACGGAGCAATCTTGCCAATGTTGCTGTAATGGATAGGCATCCAATTGAGAGGCGATGATGAGGTCGGAAAATAAAATCTATTTGAGTTACAGTGAATTTTGTGTATAACCTATCATGCATGTTCATAGATTTTTTATCAGTTATAGTACATACTATCTCTCGTCTATTGTTGCGTCGTTATCTTCTTCCTGTGTTTTTTATGTCCATTACGATTGTTTAATCCATTCAAAAATCTCTGCTATTGTTTAGAATGAATATGCTGATGGGATTATATATGATCCTTCTCATATTTAGATGACTATATGTTGTAGAATTACAATTCAATATTGTTTTGTCCAATTGTATTATATGTGGTTTATAGTCTATCATTATTTTCTACCCTTGTGTTGTGCGGCTTCACCCTACCTCATTTGTGTTTCCACTTTATCCCTTTTCCCTTATTTGCTTCATTTTCTCTCAATCTCGGGAATCCTTTTTCGGGCTGTGGAGAAATTTGTATAGCCTCCCCTATTTTCTTTCTCTTATGAGCTAAATTTGTGGCGATTCCATGGTGTTCGGGGTCGTGCTCACTCTAAGAAGAGAATGGTACACAGTACACACTGTATGATTTAGAGAGAAGATGAAGAATTTGTTCTGTGTCGAATAAACTGTTTCTGATTTCTTACACAACCTATTCTCATTTTGAGTATATATTTTGGTGGTCATTTTGACATTATTTTGGAACTTGATTCATTTTGATGCTACAAGGAGGCTTATGTCAAATTTATTTTGTATTGTATTGGATGTATTAATTAATACTAGATTTGAAAAGTCACAAAATGACCTTCAAAAGGGAGTCAAGGAACAGAAACTGAACTTCCAAAGTATCAGAAAAAGAAAAAAAAAAAATCATTAAAAAGAATAAGTCAATGAATAGTAAAACCTTTGAAATCATCATCAATTTTCCATGCCCTACTCCAGGAAGTGCATTAATTGGGAGTTGACTTATTGTAGACCTACATGTCCAAATTTAGTAGAAAAGCTACAAATCACAAGCACAATATTTTCGTTAACTATCTGAAGAATTTGATATGTAAGTTGATCTATAAATATATTATTGTTATCTGAAAACATGCAGCAGAAACCACCATAAACAATAAGTCTTGTGCAATGTCTCCACACTCCAAAGTACATGTCAAACATGGAATTAGAACTTTTGAGGAAAATTTGAAGCATCATGGTCTGGAGTAATAGAATATTTTTAACTGAACATAACTATATCTTCCATGTCTAGCATAGAACTATCTCAAAGAATTTCTAATAAAAAAATCGTATCATACAGTATAATCCACAATGTAAATACAAAATTAAAATAGCAACAATTAGCATTAACAACAACTCAATCTTATCCCACTAATTAGGGTCAGGTACATGAATCAAAAGACCCTAAGGTTGTGTCTGTTTTTCTATGTTTTTCATTTAAATCTCCTTTCTTCTTTTTTTTTCTTTTTTCTTTTTTCTTTTGCAGCATACTGTGTTGTTGCCAGAGGATTAACACAGTTTCCCTTGACCTTTCTTGAGCGAGTAAAGACCGACTTTATATCTGAATATGGTCCTGAGAAGGCTTCTACAACTCCTCCTTACAGCCTTAGCAAGGAATTTGGGTATTAACTTTATGTTTTGTGCTGTTAAGTTTAAGCTGGTGAGTTTGTGTTGTTATTTTGGCTTATGTATTAACCTCTATACAGTTTAAAGTTGAAGGAACATATGAAGTACTGTAGTGATCATCAGGATGAGATGAGCGAGCTTGCTAAGGAGGAAGCTCAGATTTTTGAGGTTAAAGGTGTCATGACAAAAAAAGTTGTAAAGGTAGAGTGGGTCTTCTCTATTGTTCAGAAAAAGTGATTTTAATAAAATTAAATTATATATCAATACCCATGAACCTTAGTTTTTTTTCAAAACAAAGTTAATAGGTTTTTGGTCCAAATAAAAGTTGTAGCATGTGTCCCAGTAAAGCTTAGCTCAGATAGTAGGAACATTACATCAAGGGTCGGGGTTCGAACCCTAGACACCTCACACATTCACCTAAAAAGGTGAATTACTGGCCACTAAATTATTTAACAAAAATAAAATAAAATTGTAGCATGCTAATGTACTGGCCCCTCTGGATTTAAATATAAGAAAAATAACTTAAATTCACACTCTGAATGATAGTTAACACCGTTTATTATTCACAGTTTAATAAAAAAAATTGAATTCTCTCTATTCATTTAATTTTCAATGAGAACTTGTTTCATTTGAATATTAGTTGAAGGGTATTTTTGGGGAATATATTATTATGGTGAAATGTGTCATGGTTTGTTTATATTTGGGTTCGGAGGGAGTACATAAAAAAAAAATCAAAATGAAAGTGTTTAGTGTTCCCTAATGTAGTATATGATCCATTGAATCCCACTTTGGTGTCATTAAGACGCCAATGGTAGGTGACATTCACCAATTAGAGTGTGCCATGTAGCACACCTGATTGTATTAGTAGTTAGGATATGATATATTGTAAAAGATTTTTATTTGGTTAGAGTCGTTTTTATGCGAATTGACTTTATGATTAGTTCTTAAACTATCACCCTCTAAGATAGATCCTAAACTATGTAAATATAGAAATAGTCCTTTAACTGTGTGAAGTGAAATTCATGAATTTAGTCCCTGTTATTAAGATGTTAGGGACTACATGGATAAATTGTTATATACGTAGTAATTAAATGACAGATTTCATGCGAGCTACTTATTATATTTACATAGTTTAGGGACTAAATTTTTGTTTTTTTTTTTCTTTCAGGCACAAGCTTTTGGAAAGACTTGGTATGGATACATGGCGACAAGGCTGGTTGCATTGGTAATTGTGTTAATGGTGGTTGCCATATGCATTTTGTACATTTTGTTCATCGTTAAATAA
Protein sequence

>MS.gene94588.t1

MAAVTTNSDTVAKAVDSLLKWRKSRLETEKPKLFDEDEEYVYLLLTLKKIPSKARVNPHKIPIPHSLISAASEQCLIIDDRPNKPSRITKDEAQKKIQSESIPISKILKLSKLMTDYRPFEAKRNYCAVVAEPKLLGKQFYKKRKIPVQVDLKKKNWKEQIEKACCSALLFLRTGTCSAVKVAKLSMERDEIVENAVAAMEGVVEVLPKKWGIVRSFHVKLLESLALPVYQAVPDVRLKIEGSGGLVSKKRKKGVKKEDSSDKGSVKSSKGSAKRKKKDGLDVNAAEDGLIVKSKKKKKSSAKEGGSEKKNDITGLAVKFALEEMIQIQKCKKELLVKDEGSDFGQEEKDGGCEGQGKEKGLTQFPLTFLERVKTDFISEYGPEKASTTPPYSLSKEFGLKLKEHMKYCSDHQDEMSELAKEEAQIFEVKGVMTKKVVKAQAFGKTWYGYMATRLVALVIVLMVVAICILYILFIVK