Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062743.t1 | AES59536.1 | 95.9 | 242 | 9 | 1 | 2 | 242 | 250 | 491 | 1.50E-118 | 435.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062743.t1 | Q8RYD1 | 36.6 | 112 | 71 | 0 | 33 | 144 | 208 | 319 | 1.1e-16 | 88.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062743.t1 | G7I584 | 95.9 | 242 | 9 | 1 | 2 | 242 | 250 | 491 | 1.1e-118 | 435.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene062743.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene062743 | 0.837476 | 5.08E-57 | -1.69E-46 |
| MS.gene049159 | MS.gene062743 | 0.836848 | 7.35E-57 | -1.69E-46 |
| MS.gene049254 | MS.gene062743 | 0.843584 | 1.28E-58 | -1.69E-46 |
| MS.gene049255 | MS.gene062743 | 0.806597 | 7.62E-50 | -1.69E-46 |
| MS.gene049271 | MS.gene062743 | 0.816793 | 4.60E-52 | -1.69E-46 |
| MS.gene049341 | MS.gene062743 | 0.800014 | 1.76E-48 | -1.69E-46 |
| MS.gene049343 | MS.gene062743 | 0.833162 | 6.25E-56 | -1.69E-46 |
| MS.gene049350 | MS.gene062743 | 0.829142 | 6.07E-55 | -1.69E-46 |
| MS.gene049404 | MS.gene062743 | 0.826622 | 2.45E-54 | -1.69E-46 |
| MS.gene049501 | MS.gene062743 | 0.836213 | 1.07E-56 | -1.69E-46 |
| MS.gene049711 | MS.gene062743 | 0.825495 | 4.54E-54 | -1.69E-46 |
| MS.gene049770 | MS.gene062743 | 0.801242 | 9.87E-49 | -1.69E-46 |
| MS.gene049821 | MS.gene062743 | 0.853238 | 2.73E-61 | -1.69E-46 |
| MS.gene049824 | MS.gene062743 | 0.850143 | 2.05E-60 | -1.69E-46 |
| MS.gene049825 | MS.gene062743 | 0.85517 | 7.55E-62 | -1.69E-46 |
| MS.gene049850 | MS.gene062743 | 0.86941 | 3.16E-66 | -1.69E-46 |
| MS.gene049873 | MS.gene062743 | 0.867243 | 1.58E-65 | -1.69E-46 |
| MS.gene050020 | MS.gene062743 | 0.834783 | 2.46E-56 | -1.69E-46 |
| MS.gene050026 | MS.gene062743 | 0.805265 | 1.45E-49 | -1.69E-46 |
| MS.gene050137 | MS.gene062743 | 0.802297 | 6.00E-49 | -1.69E-46 |
| MS.gene050156 | MS.gene062743 | 0.811865 | 5.65E-51 | -1.69E-46 |
| MS.gene050201 | MS.gene062743 | 0.810494 | 1.12E-50 | -1.69E-46 |
| MS.gene050273 | MS.gene062743 | 0.808375 | 3.19E-50 | -1.69E-46 |
| MS.gene050303 | MS.gene062743 | 0.800839 | 1.19E-48 | -1.69E-46 |
| MS.gene05045 | MS.gene062743 | 0.833826 | 4.27E-56 | -1.69E-46 |
| MS.gene050559 | MS.gene062743 | 0.80609 | 9.74E-50 | -1.69E-46 |
| MS.gene050561 | MS.gene062743 | 0.805816 | 1.11E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene062743 | 0.848948 | 4.43E-60 | -1.69E-46 |
| MS.gene050808 | MS.gene062743 | 0.821367 | 4.19E-53 | -1.69E-46 |
| MS.gene050815 | MS.gene062743 | 0.813282 | 2.77E-51 | -1.69E-46 |
| MS.gene050901 | MS.gene062743 | 0.824135 | 9.51E-54 | -1.69E-46 |
| MS.gene051018 | MS.gene062743 | 0.813108 | 3.02E-51 | -1.69E-46 |
| MS.gene051198 | MS.gene062743 | 0.814413 | 1.56E-51 | -1.69E-46 |
| MS.gene051247 | MS.gene062743 | 0.869846 | 2.28E-66 | -1.69E-46 |
| MS.gene051265 | MS.gene062743 | 0.801058 | 1.08E-48 | -1.69E-46 |
| MS.gene051279 | MS.gene062743 | 0.821639 | 3.63E-53 | -1.69E-46 |
| MS.gene051328 | MS.gene062743 | 0.852937 | 3.33E-61 | -1.69E-46 |
| MS.gene051388 | MS.gene062743 | 0.828299 | 9.71E-55 | -1.69E-46 |
| MS.gene051574 | MS.gene062743 | 0.813132 | 2.99E-51 | -1.69E-46 |
| MS.gene05157 | MS.gene062743 | 0.821473 | 3.96E-53 | -1.69E-46 |
| MS.gene051594 | MS.gene062743 | 0.810065 | 1.39E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene062743 | 0.813876 | 2.05E-51 | -1.69E-46 |
| MS.gene051700 | MS.gene062743 | 0.841131 | 5.72E-58 | -1.69E-46 |
| MS.gene051719 | MS.gene062743 | 0.895631 | 7.98E-76 | -1.69E-46 |
| MS.gene051720 | MS.gene062743 | 0.898227 | 6.52E-77 | -1.69E-46 |
| MS.gene051744 | MS.gene062743 | 0.855521 | 5.97E-62 | -1.69E-46 |
| MS.gene051957 | MS.gene062743 | 0.801546 | 8.56E-49 | -1.69E-46 |
| MS.gene052012 | MS.gene062743 | 0.810257 | 1.26E-50 | -1.69E-46 |
| MS.gene052020 | MS.gene062743 | 0.820894 | 5.39E-53 | -1.69E-46 |
| MS.gene052133 | MS.gene062743 | 0.843635 | 1.24E-58 | -1.69E-46 |
| MS.gene052323 | MS.gene062743 | 0.814427 | 1.55E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene062743 | 0.858745 | 6.67E-63 | -1.69E-46 |
| MS.gene052519 | MS.gene062743 | 0.866641 | 2.46E-65 | -1.69E-46 |
| MS.gene052561 | MS.gene062743 | 0.817797 | 2.74E-52 | -1.69E-46 |
| MS.gene052582 | MS.gene062743 | 0.85442 | 1.25E-61 | -1.69E-46 |
| MS.gene052584 | MS.gene062743 | 0.876899 | 9.67E-69 | -1.69E-46 |
| MS.gene052611 | MS.gene062743 | 0.84755 | 1.08E-59 | -1.69E-46 |
| MS.gene052613 | MS.gene062743 | 0.814175 | 1.76E-51 | -1.69E-46 |
| MS.gene052665 | MS.gene062743 | 0.847484 | 1.12E-59 | -1.69E-46 |
| MS.gene052773 | MS.gene062743 | 0.836067 | 1.16E-56 | -1.69E-46 |
| MS.gene052863 | MS.gene062743 | 0.850573 | 1.56E-60 | -1.69E-46 |
| MS.gene052896 | MS.gene062743 | 0.819372 | 1.20E-52 | -1.69E-46 |
| MS.gene053008 | MS.gene062743 | 0.83849 | 2.79E-57 | -1.69E-46 |
| MS.gene053054 | MS.gene062743 | -0.815379 | 9.53E-52 | -1.69E-46 |
| MS.gene053079 | MS.gene062743 | 0.817054 | 4.02E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene062743 | 0.801081 | 1.07E-48 | -1.69E-46 |
| MS.gene053122 | MS.gene062743 | 0.864404 | 1.25E-64 | -1.69E-46 |
| MS.gene053144 | MS.gene062743 | 0.852291 | 5.08E-61 | -1.69E-46 |
| MS.gene053221 | MS.gene062743 | 0.816743 | 4.73E-52 | -1.69E-46 |
| MS.gene053226 | MS.gene062743 | 0.912946 | 1.09E-83 | -1.69E-46 |
| MS.gene053563 | MS.gene062743 | 0.808645 | 2.80E-50 | -1.69E-46 |
| MS.gene053581 | MS.gene062743 | 0.827054 | 1.93E-54 | -1.69E-46 |
| MS.gene053597 | MS.gene062743 | 0.800815 | 1.21E-48 | -1.69E-46 |
| MS.gene053599 | MS.gene062743 | 0.843634 | 1.24E-58 | -1.69E-46 |
| MS.gene05364 | MS.gene062743 | 0.858649 | 7.13E-63 | -1.69E-46 |
| MS.gene053678 | MS.gene062743 | 0.804192 | 2.43E-49 | -1.69E-46 |
| MS.gene053883 | MS.gene062743 | 0.825456 | 4.64E-54 | -1.69E-46 |
| MS.gene053894 | MS.gene062743 | 0.809791 | 1.59E-50 | -1.69E-46 |
| MS.gene054236 | MS.gene062743 | 0.805368 | 1.38E-49 | -1.69E-46 |
| MS.gene05423 | MS.gene062743 | 0.807843 | 4.15E-50 | -1.69E-46 |
| MS.gene054576 | MS.gene062743 | 0.80601 | 1.01E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene062743 | 0.852693 | 3.91E-61 | -1.69E-46 |
| MS.gene05458 | MS.gene062743 | 0.816459 | 5.47E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene062743 | 0.852148 | 5.58E-61 | -1.69E-46 |
| MS.gene05468 | MS.gene062743 | 0.801346 | 9.40E-49 | -1.69E-46 |
| MS.gene054775 | MS.gene062743 | 0.863364 | 2.63E-64 | -1.69E-46 |
| MS.gene054801 | MS.gene062743 | 0.80479 | 1.82E-49 | -1.69E-46 |
| MS.gene054967 | MS.gene062743 | 0.803128 | 4.04E-49 | -1.69E-46 |
| MS.gene054991 | MS.gene062743 | 0.815641 | 8.33E-52 | -1.69E-46 |
| MS.gene055144 | MS.gene062743 | 0.822007 | 2.98E-53 | -1.69E-46 |
| MS.gene055166 | MS.gene062743 | 0.812294 | 4.56E-51 | -1.69E-46 |
| MS.gene05517 | MS.gene062743 | 0.803247 | 3.82E-49 | -1.69E-46 |
| MS.gene055227 | MS.gene062743 | 0.821042 | 4.98E-53 | -1.69E-46 |
| MS.gene055357 | MS.gene062743 | 0.807813 | 4.21E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene062743 | 0.844021 | 9.78E-59 | -1.69E-46 |
| MS.gene055466 | MS.gene062743 | 0.871139 | 8.58E-67 | -1.69E-46 |
| MS.gene055468 | MS.gene062743 | 0.864803 | 9.35E-65 | -1.69E-46 |
| MS.gene055512 | MS.gene062743 | 0.864186 | 1.46E-64 | -1.69E-46 |
| MS.gene055513 | MS.gene062743 | 0.818667 | 1.74E-52 | -1.69E-46 |
| MS.gene055537 | MS.gene062743 | 0.8175 | 3.19E-52 | -1.69E-46 |
| MS.gene055580 | MS.gene062743 | -0.863131 | 3.10E-64 | -1.69E-46 |
| MS.gene055589 | MS.gene062743 | 0.809232 | 2.09E-50 | -1.69E-46 |
| MS.gene055608 | MS.gene062743 | 0.805693 | 1.18E-49 | -1.69E-46 |
| MS.gene055694 | MS.gene062743 | 0.811407 | 7.11E-51 | -1.69E-46 |
| MS.gene055778 | MS.gene062743 | 0.827472 | 1.54E-54 | -1.69E-46 |
| MS.gene055808 | MS.gene062743 | 0.833038 | 6.71E-56 | -1.69E-46 |
| MS.gene055818 | MS.gene062743 | 0.831919 | 1.27E-55 | -1.69E-46 |
| MS.gene055890 | MS.gene062743 | 0.800619 | 1.32E-48 | -1.69E-46 |
| MS.gene055891 | MS.gene062743 | 0.806015 | 1.01E-49 | -1.69E-46 |
| MS.gene055926 | MS.gene062743 | 0.809443 | 1.89E-50 | -1.69E-46 |
| MS.gene056005 | MS.gene062743 | 0.820288 | 7.43E-53 | -1.69E-46 |
| MS.gene056043 | MS.gene062743 | -0.842764 | 2.12E-58 | -1.69E-46 |
| MS.gene05604 | MS.gene062743 | 0.835387 | 1.73E-56 | -1.69E-46 |
| MS.gene056050 | MS.gene062743 | 0.843802 | 1.12E-58 | -1.69E-46 |
| MS.gene056173 | MS.gene062743 | 0.820129 | 8.07E-53 | -1.69E-46 |
| MS.gene056215 | MS.gene062743 | 0.843119 | 1.70E-58 | -1.69E-46 |
| MS.gene056308 | MS.gene062743 | 0.853307 | 2.61E-61 | -1.69E-46 |
| MS.gene056366 | MS.gene062743 | 0.864061 | 1.59E-64 | -1.69E-46 |
| MS.gene056553 | MS.gene062743 | 0.837697 | 4.46E-57 | -1.69E-46 |
| MS.gene056595 | MS.gene062743 | 0.862073 | 6.56E-64 | -1.69E-46 |
| MS.gene056642 | MS.gene062743 | 0.814042 | 1.88E-51 | -1.69E-46 |
| MS.gene056643 | MS.gene062743 | 0.814937 | 1.19E-51 | -1.69E-46 |
| MS.gene056760 | MS.gene062743 | 0.805929 | 1.05E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene062743 | 0.839462 | 1.56E-57 | -1.69E-46 |
| MS.gene057208 | MS.gene062743 | 0.807737 | 4.37E-50 | -1.69E-46 |
| MS.gene057287 | MS.gene062743 | 0.802369 | 5.80E-49 | -1.69E-46 |
| MS.gene057314 | MS.gene062743 | 0.833637 | 4.76E-56 | -1.69E-46 |
| MS.gene057414 | MS.gene062743 | 0.805891 | 1.07E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene062743 | 0.87363 | 1.27E-67 | -1.69E-46 |
| MS.gene057446 | MS.gene062743 | 0.807728 | 4.39E-50 | -1.69E-46 |
| MS.gene057693 | MS.gene062743 | 0.826531 | 2.58E-54 | -1.69E-46 |
| MS.gene057705 | MS.gene062743 | 0.810709 | 1.01E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene062743 | 0.829153 | 6.04E-55 | -1.69E-46 |
| MS.gene058037 | MS.gene062743 | 0.810913 | 9.10E-51 | -1.69E-46 |
| MS.gene058216 | MS.gene062743 | 0.812917 | 3.33E-51 | -1.69E-46 |
| MS.gene058339 | MS.gene062743 | 0.811188 | 7.93E-51 | -1.69E-46 |
| MS.gene05847 | MS.gene062743 | 0.811085 | 8.35E-51 | -1.69E-46 |
| MS.gene058548 | MS.gene062743 | 0.800226 | 1.59E-48 | -1.69E-46 |
| MS.gene058625 | MS.gene062743 | 0.86162 | 9.03E-64 | -1.69E-46 |
| MS.gene058636 | MS.gene062743 | 0.821011 | 5.06E-53 | -1.69E-46 |
| MS.gene058829 | MS.gene062743 | 0.822592 | 2.18E-53 | -1.69E-46 |
| MS.gene058852 | MS.gene062743 | 0.817869 | 2.64E-52 | -1.69E-46 |
| MS.gene05894 | MS.gene062743 | 0.812185 | 4.82E-51 | -1.69E-46 |
| MS.gene058979 | MS.gene062743 | 0.820356 | 7.16E-53 | -1.69E-46 |
| MS.gene059015 | MS.gene062743 | 0.812011 | 5.25E-51 | -1.69E-46 |
| MS.gene059084 | MS.gene062743 | 0.829311 | 5.53E-55 | -1.69E-46 |
| MS.gene05950 | MS.gene062743 | 0.801378 | 9.26E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene062743 | 0.859199 | 4.88E-63 | -1.69E-46 |
| MS.gene059570 | MS.gene062743 | 0.803054 | 4.19E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene062743 | 0.863947 | 1.73E-64 | -1.69E-46 |
| MS.gene059725 | MS.gene062743 | 0.809759 | 1.61E-50 | -1.69E-46 |
| MS.gene05978 | MS.gene062743 | 0.806763 | 7.02E-50 | -1.69E-46 |
| MS.gene05979 | MS.gene062743 | 0.804772 | 1.84E-49 | -1.69E-46 |
| MS.gene059842 | MS.gene062743 | 0.830916 | 2.24E-55 | -1.69E-46 |
| MS.gene059935 | MS.gene062743 | 0.807154 | 5.81E-50 | -1.69E-46 |
| MS.gene059937 | MS.gene062743 | 0.821418 | 4.08E-53 | -1.69E-46 |
| MS.gene060137 | MS.gene062743 | -0.806784 | 6.95E-50 | -1.69E-46 |
| MS.gene060310 | MS.gene062743 | 0.804956 | 1.68E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene062743 | 0.815396 | 9.44E-52 | -1.69E-46 |
| MS.gene060365 | MS.gene062743 | 0.813336 | 2.70E-51 | -1.69E-46 |
| MS.gene060429 | MS.gene062743 | 0.88944 | 2.42E-73 | -1.69E-46 |
| MS.gene060519 | MS.gene062743 | 0.844929 | 5.58E-59 | -1.69E-46 |
| MS.gene060521 | MS.gene062743 | 0.819398 | 1.19E-52 | -1.69E-46 |
| MS.gene060572 | MS.gene062743 | 0.818501 | 1.90E-52 | -1.69E-46 |
| MS.gene060587 | MS.gene062743 | 0.867067 | 1.80E-65 | -1.69E-46 |
| MS.gene060603 | MS.gene062743 | 0.807127 | 5.88E-50 | -1.69E-46 |
| MS.gene060634 | MS.gene062743 | -0.80628 | 8.88E-50 | -1.69E-46 |
| MS.gene060689 | MS.gene062743 | 0.81097 | 8.85E-51 | -1.69E-46 |
| MS.gene060803 | MS.gene062743 | 0.830786 | 2.41E-55 | -1.69E-46 |
| MS.gene061176 | MS.gene062743 | 0.822752 | 2.00E-53 | -1.69E-46 |
| MS.gene061177 | MS.gene062743 | 0.822779 | 1.97E-53 | -1.69E-46 |
| MS.gene061178 | MS.gene062743 | 0.82235 | 2.48E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062743.t1 | MTR_1g021500 | 96.281 | 242 | 8 | 1 | 2 | 242 | 250 | 491 | 6.57e-172 | 483 |
| MS.gene062743.t1 | MTR_1g021500 | 98.421 | 190 | 3 | 0 | 2 | 191 | 250 | 439 | 1.49e-138 | 396 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062743.t1 | AT4G33280 | 36.607 | 112 | 71 | 0 | 33 | 144 | 208 | 319 | 2.75e-20 | 88.6 |
| MS.gene062743.t1 | AT4G33280 | 36.607 | 112 | 71 | 0 | 33 | 144 | 269 | 380 | 3.54e-20 | 88.6 |
Find 67 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTTTAGTATCCACTTATT+AGG | 0.155011 | 1.4:+2904179 | None:intergenic |
| CACATAATCCTTGAGGTATT+TGG | 0.165984 | 1.4:+2902704 | None:intergenic |
| TCTAAGCTGGCTTTCTTCTT+TGG | 0.234707 | 1.4:+2902678 | None:intergenic |
| TATATAGTTCCTGCGTCTTT+GGG | 0.239309 | 1.4:+2904506 | None:intergenic |
| CAATGGCCTCCAGTTCTGTT+TGG | 0.239462 | 1.4:+2903832 | None:intergenic |
| GTATATAGTTCCTGCGTCTT+TGG | 0.266848 | 1.4:+2904505 | None:intergenic |
| TGATTTGACTATGTTTCTTT+TGG | 0.271779 | 1.4:+2902728 | None:intergenic |
| CTCAAGCCCCTCTTCTTTCC+TGG | 0.311310 | 1.4:+2903903 | None:intergenic |
| TGTGACAGGCCTTCTATTTG+AGG | 0.325138 | 1.4:+2904483 | None:intergenic |
| CGTAACAATGGAGGACTTAC+TGG | 0.329858 | 1.4:-2904077 | MS.gene062743:CDS |
| AATGGCCTCCAGTTCTGTTT+GGG | 0.333107 | 1.4:+2903833 | None:intergenic |
| GGTTTAGTATCCACTTATTA+GGG | 0.333478 | 1.4:+2904180 | None:intergenic |
| GGGGAGCCCTTTGGAGACGC+TGG | 0.338977 | 1.4:+2904526 | None:intergenic |
| TGCGTCTTTGGGGAGCCCTT+TGG | 0.361431 | 1.4:+2904517 | None:intergenic |
| CCCTTTGGAGACGCTGGGGC+AGG | 0.415776 | 1.4:+2904532 | None:intergenic |
| ATGAACTCTTATCTCAAATA+CGG | 0.420688 | 1.4:-2902752 | MS.gene062743:CDS |
| CGGTGCTGCCCAAACAGAAC+TGG | 0.423283 | 1.4:-2903841 | MS.gene062743:CDS |
| AACACACGTCAAACTCTTCA+AGG | 0.430454 | 1.4:+2904024 | None:intergenic |
| ACACAATTACGCACCTTCAA+TGG | 0.435249 | 1.4:+2903815 | None:intergenic |
| AACTATATACCTCAAATAGA+AGG | 0.436916 | 1.4:-2904492 | MS.gene062743:CDS |
| CAGTTCTGTTTGGGCAGCAC+CGG | 0.454969 | 1.4:+2903842 | None:intergenic |
| GGGAGCCCTTTGGAGACGCT+GGG | 0.466569 | 1.4:+2904527 | None:intergenic |
| AAGAGGGGCTTGAGTTCTAC+AGG | 0.469641 | 1.4:-2903894 | MS.gene062743:CDS |
| GGAGAATGCACCGCAGTAAG+AGG | 0.480989 | 1.4:+2903924 | None:intergenic |
| ACAGAACTGGAGGCCATTGA+AGG | 0.495326 | 1.4:-2903828 | MS.gene062743:intron |
| TACGCATGGGTAAGAATGAA+TGG | 0.495657 | 1.4:-2904127 | MS.gene062743:CDS |
| CTTACTGCGGTGCATTCTCC+AGG | 0.496763 | 1.4:-2903921 | MS.gene062743:CDS |
| TGGGTAAGAATGAATGGCTT+GGG | 0.497908 | 1.4:-2904121 | MS.gene062743:CDS |
| ATGGGTAAGAATGAATGGCT+TGG | 0.510570 | 1.4:-2904122 | MS.gene062743:CDS |
| ACCTGCCCCAGCGTCTCCAA+AGG | 0.514129 | 1.4:-2904533 | MS.gene062743:CDS |
| AGGAGCTGAGACAGACGAGC+AGG | 0.517295 | 1.4:-2902793 | MS.gene062743:CDS |
| ACTAGTCATTCCCTAATAAG+TGG | 0.519210 | 1.4:-2904190 | MS.gene062743:intron |
| AAAGCCAGCTTAGATCTAGA+AGG | 0.521111 | 1.4:-2902669 | MS.gene062743:CDS |
| CCTGCCCCAGCGTCTCCAAA+GGG | 0.534279 | 1.4:-2904532 | MS.gene062743:CDS |
| CAAATACCTCAAGGATTATG+TGG | 0.537700 | 1.4:-2902703 | MS.gene062743:CDS |
| ATGTCATGCAAATGACCAGC+TGG | 0.547589 | 1.4:+2903993 | None:intergenic |
| TCAAGATGTGATATTACGCA+TGG | 0.548312 | 1.4:-2904141 | MS.gene062743:CDS |
| GGTGCCTTCTAGATCTAAGC+TGG | 0.550514 | 1.4:+2902665 | None:intergenic |
| TGTATACAAGAGATTCTTCG+TGG | 0.566958 | 1.4:-2904377 | MS.gene062743:intron |
| AATCTCTTGTATACATGTGA+AGG | 0.571018 | 1.4:+2904385 | None:intergenic |
| CTTGAGACGATGGAGCAAGA+TGG | 0.572879 | 1.4:+2904159 | None:intergenic |
| GAGTTCTACAGGAAAGAAGA+GGG | 0.574907 | 1.4:-2903883 | MS.gene062743:CDS |
| GTGTGTTTGTTCAAACCAGC+TGG | 0.583771 | 1.4:-2904008 | MS.gene062743:CDS |
| CAAATCATCCAAATACCTCA+AGG | 0.590650 | 1.4:-2902712 | MS.gene062743:CDS |
| GCATTCTCCAGGAAAGAAGA+GGG | 0.592388 | 1.4:-2903910 | MS.gene062743:CDS |
| ATATAGTTCCTGCGTCTTTG+GGG | 0.597461 | 1.4:+2904507 | None:intergenic |
| TGAACTCTTATCTCAAATAC+GGG | 0.597831 | 1.4:-2902751 | MS.gene062743:CDS |
| TGCATTCTCCAGGAAAGAAG+AGG | 0.603183 | 1.4:-2903911 | MS.gene062743:CDS |
| TGCTGCCCAAACAGAACTGG+AGG | 0.604957 | 1.4:-2903838 | MS.gene062743:CDS |
| AGTTACAAGCAAGCTCTCCT+CGG | 0.605075 | 1.4:+2904414 | None:intergenic |
| CATAATATTCGTAACAATGG+AGG | 0.607755 | 1.4:-2904086 | MS.gene062743:CDS |
| GGAGCCCTTTGGAGACGCTG+GGG | 0.611312 | 1.4:+2904528 | None:intergenic |
| TGAGTTCTACAGGAAAGAAG+AGG | 0.614505 | 1.4:-2903884 | MS.gene062743:CDS |
| AAAGGGCTCCCCAAAGACGC+AGG | 0.615774 | 1.4:-2904515 | MS.gene062743:CDS |
| AACAATGGAGGACTTACTGG+TGG | 0.616719 | 1.4:-2904074 | MS.gene062743:CDS |
| TATCATAATATTCGTAACAA+TGG | 0.617731 | 1.4:-2904089 | MS.gene062743:CDS |
| CAAGATGTGATATTACGCAT+GGG | 0.629761 | 1.4:-2904140 | MS.gene062743:CDS |
| ATGGAGGACTTACTGGTGGG+TGG | 0.638391 | 1.4:-2904070 | MS.gene062743:CDS |
| AATATCACATCTTGAGACGA+TGG | 0.639490 | 1.4:+2904149 | None:intergenic |
| GGAGATTACTCCTCTTACTG+CGG | 0.639926 | 1.4:-2903934 | MS.gene062743:CDS |
| GGAGTTAAGAGAACACTGAC+CGG | 0.646401 | 1.4:-2903861 | MS.gene062743:CDS |
| TTGGTACCACATAATCCTTG+AGG | 0.659780 | 1.4:+2902697 | None:intergenic |
| GGCTCAGGCAGCATGTACCG+AGG | 0.663486 | 1.4:-2904431 | MS.gene062743:CDS |
| ACAATGGAGGACTTACTGGT+GGG | 0.682704 | 1.4:-2904073 | MS.gene062743:CDS |
| AATTCCCATTCAGCTAGCAG+AGG | 0.694172 | 1.4:+2902644 | None:intergenic |
| AGTTCTACAGGAAAGAAGAG+GGG | 0.697073 | 1.4:-2903882 | MS.gene062743:CDS |
| CATTCTCCAGGAAAGAAGAG+GGG | 0.708428 | 1.4:-2903909 | MS.gene062743:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAATAAAAATAATCATAAT+TGG | - | chr1.4:2902864-2902883 | MS.gene062743:intron | 10.0% |
| !!! | TTAATTCTACATTATTTTTA+TGG | - | chr1.4:2905017-2905036 | MS.gene062743:intron | 10.0% |
| !! | AAGTTAAAAAAGTAAAGTAA+GGG | + | chr1.4:2903499-2903518 | None:intergenic | 15.0% |
| !! | ATTTAATTAAATTAGCCATA+TGG | + | chr1.4:2904855-2904874 | None:intergenic | 15.0% |
| !! | TATAATAAAGTTAAAAATGC+AGG | + | chr1.4:2903591-2903610 | None:intergenic | 15.0% |
| !! | TTTAATTAAATTAGCCATAT+GGG | + | chr1.4:2904854-2904873 | None:intergenic | 15.0% |
| !!! | ATTTCTTTTATGTTGAAATT+CGG | + | chr1.4:2904289-2904308 | None:intergenic | 15.0% |
| !!! | TTATTTTGATTTTGAATAAC+CGG | - | chr1.4:2902674-2902693 | MS.gene062743:CDS | 15.0% |
| !! | AACTAAAATCATGTAAAACA+AGG | - | chr1.4:2904609-2904628 | MS.gene062743:intron | 20.0% |
| !! | CAAGTTAAAAAAGTAAAGTA+AGG | + | chr1.4:2903500-2903519 | None:intergenic | 20.0% |
| !! | TATCATAATATTCGTAACAA+TGG | - | chr1.4:2903748-2903767 | MS.gene062743:intron | 20.0% |
| !! | TGGCTAATTTAATTAAATAG+AGG | - | chr1.4:2904857-2904876 | MS.gene062743:intron | 20.0% |
| !!! | TACATTATTTTTATGGATCA+AGG | - | chr1.4:2905024-2905043 | MS.gene062743:intron | 20.0% |
| ! | AAAGTTTAATAGAACGTGTA+AGG | - | chr1.4:2904410-2904429 | MS.gene062743:CDS | 25.0% |
| ! | AACTATATACCTCAAATAGA+AGG | - | chr1.4:2903345-2903364 | MS.gene062743:intron | 25.0% |
| ! | AATCTCTCCTTACTAAAATT+TGG | + | chr1.4:2902893-2902912 | None:intergenic | 25.0% |
| ! | AGTTACATGAAATTGGAATT+TGG | + | chr1.4:2902716-2902735 | None:intergenic | 25.0% |
| ! | ATGAACTCTTATCTCAAATA+CGG | - | chr1.4:2905085-2905104 | MS.gene062743:intron | 25.0% |
| ! | CCAATTTCATGTAACTATAT+AGG | - | chr1.4:2902720-2902739 | MS.gene062743:CDS | 25.0% |
| ! | CCTATATAGTTACATGAAAT+TGG | + | chr1.4:2902723-2902742 | None:intergenic | 25.0% |
| ! | TATATGTTAACAGTTGTGTT+AGG | - | chr1.4:2904082-2904101 | MS.gene062743:CDS | 25.0% |
| !! | ATCGTTTTATGTCTATGTTT+TGG | - | chr1.4:2904127-2904146 | MS.gene062743:CDS | 25.0% |
| !! | TCGGTTTTGCAAAATAATTA+GGG | + | chr1.4:2904270-2904289 | None:intergenic | 25.0% |
| !! | TGATTTGACTATGTTTCTTT+TGG | + | chr1.4:2905112-2905131 | None:intergenic | 25.0% |
| !! | TTCGGTTTTGCAAAATAATT+AGG | + | chr1.4:2904271-2904290 | None:intergenic | 25.0% |
| !! | TTTAGTAAGGAGAGATTTTT+GGG | - | chr1.4:2902896-2902915 | MS.gene062743:intron | 25.0% |
| !! | TTTTAGTAAGGAGAGATTTT+TGG | - | chr1.4:2902895-2902914 | MS.gene062743:intron | 25.0% |
| !!! | ATACTACAGAATTTGTTGTT+TGG | + | chr1.4:2904557-2904576 | None:intergenic | 25.0% |
| !!! | GATATTCCATCATTACTTTT+TGG | - | chr1.4:2902785-2902804 | MS.gene062743:CDS | 25.0% |
| !!! | TGAGAAAACTGCTTTTTAAT+TGG | + | chr1.4:2903072-2903091 | None:intergenic | 25.0% |
| AAACATTAAAAACAGCCGTT+TGG | - | chr1.4:2904771-2904790 | MS.gene062743:intron | 30.0% | |
| AATCTCTTGTATACATGTGA+AGG | + | chr1.4:2903455-2903474 | None:intergenic | 30.0% | |
| ACATTAGCAGAATATTCATG+AGG | + | chr1.4:2904918-2904937 | None:intergenic | 30.0% | |
| CACTCATTCATTCAAACATT+CGG | + | chr1.4:2902765-2902784 | None:intergenic | 30.0% | |
| CATAATATTCGTAACAATGG+AGG | - | chr1.4:2903751-2903770 | MS.gene062743:intron | 30.0% | |
| CATGTAACTATATAGGTGAT+AGG | - | chr1.4:2902727-2902746 | MS.gene062743:CDS | 30.0% | |
| GCAGACATGAATTTCTTTAT+TGG | - | chr1.4:2904639-2904658 | MS.gene062743:intron | 30.0% | |
| GGTTTAGTATCCACTTATTA+GGG | + | chr1.4:2903660-2903679 | None:intergenic | 30.0% | |
| TATGCATTTAGTAGTGTGTT+AGG | - | chr1.4:2904738-2904757 | MS.gene062743:intron | 30.0% | |
| TGAACTCTTATCTCAAATAC+GGG | - | chr1.4:2905086-2905105 | MS.gene062743:intron | 30.0% | |
| TGAGATTGAAAAAACTCTTC+AGG | - | chr1.4:2903382-2903401 | MS.gene062743:intron | 30.0% | |
| TGGTTTAGTATCCACTTATT+AGG | + | chr1.4:2903661-2903680 | None:intergenic | 30.0% | |
| TGTAAATACTGCATCACAAA+TGG | + | chr1.4:2904464-2904483 | None:intergenic | 30.0% | |
| TTACACATAGTGAATTACCT+AGG | + | chr1.4:2904190-2904209 | None:intergenic | 30.0% | |
| ! | AATAACCGGAACATTTTCAA+AGG | - | chr1.4:2902688-2902707 | MS.gene062743:CDS | 30.0% |
| ! | ATAACCGGAACATTTTCAAA+GGG | - | chr1.4:2902689-2902708 | MS.gene062743:CDS | 30.0% |
| ! | GTTTTGCAAAATAATTAGGG+TGG | + | chr1.4:2904267-2904286 | None:intergenic | 30.0% |
| ! | TGTGGTCTAGAATTAAATTG+AGG | + | chr1.4:2902814-2902833 | None:intergenic | 30.0% |
| !! | ATTGTTTCTGTTATCCCATA+TGG | - | chr1.4:2904837-2904856 | MS.gene062743:intron | 30.0% |
| !! | CTATGTTTTGGATGTTATGA+TGG | - | chr1.4:2904139-2904158 | MS.gene062743:CDS | 30.0% |
| AATATCACATCTTGAGACGA+TGG | + | chr1.4:2903691-2903710 | None:intergenic | 35.0% | |
| ACCTTCATATTCTCATTCAC+GGG | - | chr1.4:2904353-2904372 | MS.gene062743:intron | 35.0% | |
| ACTAGTCATTCCCTAATAAG+TGG | - | chr1.4:2903647-2903666 | MS.gene062743:intron | 35.0% | |
| ACTTGTCTAATCTTCTACCT+AGG | - | chr1.4:2904170-2904189 | MS.gene062743:CDS | 35.0% | |
| AGGACTCCAAAAAGTAATGA+TGG | + | chr1.4:2902794-2902813 | None:intergenic | 35.0% | |
| ATATAGGTGATAGGCAAAAG+TGG | - | chr1.4:2902736-2902755 | MS.gene062743:CDS | 35.0% | |
| CAAATACCTCAAGGATTATG+TGG | - | chr1.4:2905134-2905153 | MS.gene062743:intron | 35.0% | |
| CAAATCATCCAAATACCTCA+AGG | - | chr1.4:2905125-2905144 | MS.gene062743:intron | 35.0% | |
| CAAGATGTGATATTACGCAT+GGG | - | chr1.4:2903697-2903716 | MS.gene062743:intron | 35.0% | |
| CAAGTTTACTATGCTTCTTG+TGG | + | chr1.4:2902832-2902851 | None:intergenic | 35.0% | |
| CACCTTCATATTCTCATTCA+CGG | - | chr1.4:2904352-2904371 | MS.gene062743:intron | 35.0% | |
| CGAATGTTTGAATGAATGAG+TGG | - | chr1.4:2902763-2902782 | MS.gene062743:CDS | 35.0% | |
| CTCTCCTTACTAAAATTTGG+TGG | + | chr1.4:2902890-2902909 | None:intergenic | 35.0% | |
| GATTGAAAAAACTCTTCAGG+TGG | - | chr1.4:2903385-2903404 | MS.gene062743:intron | 35.0% | |
| TATAGGTGATAGGCAAAAGT+GGG | - | chr1.4:2902737-2902756 | MS.gene062743:CDS | 35.0% | |
| TATATAGTTCCTGCGTCTTT+GGG | + | chr1.4:2903334-2903353 | None:intergenic | 35.0% | |
| TCAAGATGTGATATTACGCA+TGG | - | chr1.4:2903696-2903715 | MS.gene062743:intron | 35.0% | |
| TCCATGTTTCAAGAAAGCAA+TGG | + | chr1.4:2904329-2904348 | None:intergenic | 35.0% | |
| TCCATTGCTTTCTTGAAACA+TGG | - | chr1.4:2904325-2904344 | MS.gene062743:intron | 35.0% | |
| TCTTTATTGGTACTCTGTGT+TGG | - | chr1.4:2904652-2904671 | MS.gene062743:intron | 35.0% | |
| TGTATACAAGAGATTCTTCG+TGG | - | chr1.4:2903460-2903479 | MS.gene062743:intron | 35.0% | |
| ! | ATGGCTCTTTCATTCTGAAA+GGG | - | chr1.4:2904802-2904821 | MS.gene062743:intron | 35.0% |
| ! | CACATAATCCTTGAGGTATT+TGG | + | chr1.4:2905136-2905155 | None:intergenic | 35.0% |
| ! | TAACCGGAACATTTTCAAAG+GGG | - | chr1.4:2902690-2902709 | MS.gene062743:CDS | 35.0% |
| ! | TCAATCTCATCTTTTGTGAC+AGG | + | chr1.4:2903371-2903390 | None:intergenic | 35.0% |
| ! | TTAACAGAAAGAGTACACTG+AGG | - | chr1.4:2904700-2904719 | MS.gene062743:intron | 35.0% |
| !! | TTGGCCACCAAATTTTAGTA+AGG | - | chr1.4:2902883-2902902 | MS.gene062743:intron | 35.0% |
| !!! | GAGCATTTTTAGAGTTGTTG+AGG | - | chr1.4:2903882-2903901 | MS.gene062743:CDS | 35.0% |
| !!! | GCAGTAGCTAGACTTTTTTA+AGG | - | chr1.4:2904220-2904239 | MS.gene062743:intron | 35.0% |
| AAAGCCAGCTTAGATCTAGA+AGG | - | chr1.4:2905168-2905187 | MS.gene062743:intron | 40.0% | |
| AACACACGTCAAACTCTTCA+AGG | + | chr1.4:2903816-2903835 | None:intergenic | 40.0% | |
| ACACAATTACGCACCTTCAA+TGG | + | chr1.4:2904025-2904044 | None:intergenic | 40.0% | |
| AGTTCTACAGGAAAGAAGAG+GGG | - | chr1.4:2903955-2903974 | MS.gene062743:CDS | 40.0% | |
| ATATAGTTCCTGCGTCTTTG+GGG | + | chr1.4:2903333-2903352 | None:intergenic | 40.0% | |
| ATGGGTAAGAATGAATGGCT+TGG | - | chr1.4:2903715-2903734 | MS.gene062743:intron | 40.0% | |
| CATGGCTCTTTCATTCTGAA+AGG | - | chr1.4:2904801-2904820 | MS.gene062743:intron | 40.0% | |
| CGTGAATGAGAATATGAAGG+TGG | + | chr1.4:2904354-2904373 | None:intergenic | 40.0% | |
| GAAAGCAATGGACAAACACT+TGG | + | chr1.4:2904317-2904336 | None:intergenic | 40.0% | |
| GAGTTCTACAGGAAAGAAGA+GGG | - | chr1.4:2903954-2903973 | MS.gene062743:CDS | 40.0% | |
| GTATATAGTTCCTGCGTCTT+TGG | + | chr1.4:2903335-2903354 | None:intergenic | 40.0% | |
| TACGCATGGGTAAGAATGAA+TGG | - | chr1.4:2903710-2903729 | MS.gene062743:intron | 40.0% | |
| TATCAAATCAATGTCCTGCC+AGG | + | chr1.4:2902961-2902980 | None:intergenic | 40.0% | |
| TGAGTTCTACAGGAAAGAAG+AGG | - | chr1.4:2903953-2903972 | MS.gene062743:CDS | 40.0% | |
| TGGGTAAGAATGAATGGCTT+GGG | - | chr1.4:2903716-2903735 | MS.gene062743:intron | 40.0% | |
| TGTCTGTGTTGTGTTTGTGT+TGG | - | chr1.4:2903185-2903204 | MS.gene062743:intron | 40.0% | |
| TTGGTACCACATAATCCTTG+AGG | + | chr1.4:2905143-2905162 | None:intergenic | 40.0% | |
| ! | GCAGTTTTCTCACTTATCGA+AGG | - | chr1.4:2903080-2903099 | MS.gene062743:intron | 40.0% |
| ! | TGGCTCTTTCATTCTGAAAG+GGG | - | chr1.4:2904803-2904822 | MS.gene062743:intron | 40.0% |
| ! | TTTTACCAGTGTCACATGTC+TGG | - | chr1.4:2903162-2903181 | MS.gene062743:intron | 40.0% |
| !! | ACACTTAGCTGGTGTTTTTG+TGG | - | chr1.4:2903031-2903050 | MS.gene062743:intron | 40.0% |
| !! | ACATGGACTTGCTGTTAATG+TGG | - | chr1.4:2903249-2903268 | MS.gene062743:intron | 40.0% |
| !! | TCTAAGCTGGCTTTCTTCTT+TGG | + | chr1.4:2905162-2905181 | None:intergenic | 40.0% |
| !!! | TCTCATTCACGGGCATTTTT+TGG | - | chr1.4:2904363-2904382 | MS.gene062743:intron | 40.0% |
| AAAAACTCTTCAGGTGGCTC+AGG | - | chr1.4:2903391-2903410 | MS.gene062743:intron | 45.0% | |
| AACAATGGAGGACTTACTGG+TGG | - | chr1.4:2903763-2903782 | MS.gene062743:intron | 45.0% | |
| AATGGCCTCCAGTTCTGTTT+GGG | + | chr1.4:2904007-2904026 | None:intergenic | 45.0% | |
| ACAATGGAGGACTTACTGGT+GGG | - | chr1.4:2903764-2903783 | MS.gene062743:intron | 45.0% | |
| ACACACACACACACACAATG+AGG | + | chr1.4:2903556-2903575 | None:intergenic | 45.0% | |
| AGTTACAAGCAAGCTCTCCT+CGG | + | chr1.4:2903426-2903445 | None:intergenic | 45.0% | |
| ATGTCATGCAAATGACCAGC+TGG | + | chr1.4:2903847-2903866 | None:intergenic | 45.0% | |
| CATTCTCCAGGAAAGAAGAG+GGG | - | chr1.4:2903928-2903947 | MS.gene062743:CDS | 45.0% | |
| CCAACATTGTGACACTTAGC+TGG | - | chr1.4:2903020-2903039 | MS.gene062743:intron | 45.0% | |
| CCAGCTAAGTGTCACAATGT+TGG | + | chr1.4:2903023-2903042 | None:intergenic | 45.0% | |
| CGTAACAATGGAGGACTTAC+TGG | - | chr1.4:2903760-2903779 | MS.gene062743:intron | 45.0% | |
| GAGCCATGTGAAGAACCAAA+CGG | + | chr1.4:2904789-2904808 | None:intergenic | 45.0% | |
| GCATTCTCCAGGAAAGAAGA+GGG | - | chr1.4:2903927-2903946 | MS.gene062743:CDS | 45.0% | |
| GCCCGTGAATGAGAATATGA+AGG | + | chr1.4:2904357-2904376 | None:intergenic | 45.0% | |
| GGAGATTACTCCTCTTACTG+CGG | - | chr1.4:2903903-2903922 | MS.gene062743:CDS | 45.0% | |
| GGAGTTAAGAGAACACTGAC+CGG | - | chr1.4:2903976-2903995 | MS.gene062743:CDS | 45.0% | |
| GGTACTCTGTGTTGGACTTT+CGG | - | chr1.4:2904660-2904679 | MS.gene062743:intron | 45.0% | |
| GTCTGAGGAAGTTTCGTTGT+TGG | - | chr1.4:2904046-2904065 | MS.gene062743:CDS | 45.0% | |
| GTGTGTTTGTTCAAACCAGC+TGG | - | chr1.4:2903829-2903848 | MS.gene062743:CDS | 45.0% | |
| TGCATTCTCCAGGAAAGAAG+AGG | - | chr1.4:2903926-2903945 | MS.gene062743:CDS | 45.0% | |
| TGTGACAGGCCTTCTATTTG+AGG | + | chr1.4:2903357-2903376 | None:intergenic | 45.0% | |
| ! | ACTTATCGAAGGTGTGTCCA+GGG | - | chr1.4:2903091-2903110 | MS.gene062743:intron | 45.0% |
| ! | TGGCCCCTTTGAAAATGTTC+CGG | + | chr1.4:2902696-2902715 | None:intergenic | 45.0% |
| !! | GATTTGTTATGTGAACCGCC+TGG | - | chr1.4:2902940-2902959 | MS.gene062743:intron | 45.0% |
| !! | TGTGTTGGACTTTCGGTGTT+AGG | - | chr1.4:2904667-2904686 | MS.gene062743:intron | 45.0% |
| !!! | TTTTTATTAAAATTAATACA+TGG | - | chr1.4:2903232-2903251 | MS.gene062743:intron | 5.0% |
| AAGAGGGGCTTGAGTTCTAC+AGG | - | chr1.4:2903943-2903962 | MS.gene062743:CDS | 50.0% | |
| ACAGAACTGGAGGCCATTGA+AGG | - | chr1.4:2904009-2904028 | MS.gene062743:CDS | 50.0% | |
| AGACACCAGACATGTGACAC+TGG | + | chr1.4:2903170-2903189 | None:intergenic | 50.0% | |
| CAAATCAATGTCCTGCCAGG+CGG | + | chr1.4:2902958-2902977 | None:intergenic | 50.0% | |
| CAATGGCCTCCAGTTCTGTT+TGG | + | chr1.4:2904008-2904027 | None:intergenic | 50.0% | |
| CTTGAGACGATGGAGCAAGA+TGG | + | chr1.4:2903681-2903700 | None:intergenic | 50.0% | |
| GAATGAAGTCACGCGTGTCA+GGG | + | chr1.4:2903122-2903141 | None:intergenic | 50.0% | |
| GGTGCCTTCTAGATCTAAGC+TGG | + | chr1.4:2905175-2905194 | None:intergenic | 50.0% | |
| GTGCGTAATTGTGTCGTCTG+AGG | - | chr1.4:2904031-2904050 | MS.gene062743:CDS | 50.0% | |
| TGAATGAAGTCACGCGTGTC+AGG | + | chr1.4:2903123-2903142 | None:intergenic | 50.0% | |
| ! | CACTTATCGAAGGTGTGTCC+AGG | - | chr1.4:2903090-2903109 | MS.gene062743:intron | 50.0% |
| !! | CAGCCGTTTGGTTCTTCACA+TGG | - | chr1.4:2904783-2904802 | MS.gene062743:intron | 50.0% |
| ATGGAGGACTTACTGGTGGG+TGG | - | chr1.4:2903767-2903786 | MS.gene062743:intron | 55.0% | |
| CAGTTCTGTTTGGGCAGCAC+CGG | + | chr1.4:2903998-2904017 | None:intergenic | 55.0% | |
| CTCAAGCCCCTCTTCTTTCC+TGG | + | chr1.4:2903937-2903956 | None:intergenic | 55.0% | |
| CTTACTGCGGTGCATTCTCC+AGG | - | chr1.4:2903916-2903935 | MS.gene062743:CDS | 55.0% | |
| GGAGAATGCACCGCAGTAAG+AGG | + | chr1.4:2903916-2903935 | None:intergenic | 55.0% | |
| TGCTGCCCAAACAGAACTGG+AGG | - | chr1.4:2903999-2904018 | MS.gene062743:CDS | 55.0% | |
| TGTTATGTGAACCGCCTGGC+AGG | - | chr1.4:2902944-2902963 | MS.gene062743:intron | 55.0% | |
| AAAGGGCTCCCCAAAGACGC+AGG | - | chr1.4:2903322-2903341 | MS.gene062743:intron | 60.0% | |
| AGGAGCTGAGACAGACGAGC+AGG | - | chr1.4:2905044-2905063 | MS.gene062743:intron | 60.0% | |
| GAAGTCACGCGTGTCAGGGT+CGG | + | chr1.4:2903118-2903137 | None:intergenic | 60.0% | |
| ! | TGCGTCTTTGGGGAGCCCTT+TGG | + | chr1.4:2903323-2903342 | None:intergenic | 60.0% |
| !! | CGGTGCTGCCCAAACAGAAC+TGG | - | chr1.4:2903996-2904015 | MS.gene062743:CDS | 60.0% |
| ACCTGCCCCAGCGTCTCCAA+AGG | - | chr1.4:2903304-2903323 | MS.gene062743:intron | 65.0% | |
| CCTGCCCCAGCGTCTCCAAA+GGG | - | chr1.4:2903305-2903324 | MS.gene062743:intron | 65.0% | |
| GGCTCAGGCAGCATGTACCG+AGG | - | chr1.4:2903406-2903425 | MS.gene062743:intron | 65.0% | |
| ! | GGAGCCCTTTGGAGACGCTG+GGG | + | chr1.4:2903312-2903331 | None:intergenic | 65.0% |
| ! | GGGAGCCCTTTGGAGACGCT+GGG | + | chr1.4:2903313-2903332 | None:intergenic | 65.0% |
| ! | CCCTTTGGAGACGCTGGGGC+AGG | + | chr1.4:2903308-2903327 | None:intergenic | 70.0% |
| ! | GGGGAGCCCTTTGGAGACGC+TGG | + | chr1.4:2903314-2903333 | None:intergenic | 70.0% |
| CGCGTGTCAGGGTCGGACCC+TGG | + | chr1.4:2903111-2903130 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 2902653 | 2905206 | 2902653 | ID=MS.gene062743 |
| chr1.4 | mRNA | 2902653 | 2905206 | 2902653 | ID=MS.gene062743.t1;Parent=MS.gene062743 |
| chr1.4 | exon | 2905203 | 2905206 | 2905203 | ID=MS.gene062743.t1.exon1;Parent=MS.gene062743.t1 |
| chr1.4 | CDS | 2905203 | 2905206 | 2905203 | ID=cds.MS.gene062743.t1;Parent=MS.gene062743.t1 |
| chr1.4 | exon | 2904378 | 2904562 | 2904378 | ID=MS.gene062743.t1.exon2;Parent=MS.gene062743.t1 |
| chr1.4 | CDS | 2904378 | 2904562 | 2904378 | ID=cds.MS.gene062743.t1;Parent=MS.gene062743.t1 |
| chr1.4 | exon | 2903829 | 2904207 | 2903829 | ID=MS.gene062743.t1.exon3;Parent=MS.gene062743.t1 |
| chr1.4 | CDS | 2903829 | 2904207 | 2903829 | ID=cds.MS.gene062743.t1;Parent=MS.gene062743.t1 |
| chr1.4 | exon | 2902653 | 2902813 | 2902653 | ID=MS.gene062743.t1.exon4;Parent=MS.gene062743.t1 |
| chr1.4 | CDS | 2902653 | 2902813 | 2902653 | ID=cds.MS.gene062743.t1;Parent=MS.gene062743.t1 |
| Gene Sequence |
| Protein sequence |
