Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38844.t1 | XP_013453000.1 | 96.4 | 603 | 22 | 0 | 1 | 603 | 1 | 603 | 2.80E-259 | 904.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38844.t1 | Q6Q151 | 81.6 | 407 | 63 | 4 | 1 | 404 | 1 | 398 | 5.2e-174 | 612.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38844.t1 | G7KN14 | 96.4 | 603 | 22 | 0 | 1 | 603 | 18 | 620 | 2.0e-259 | 904.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene38844 | 0.841473 | 4.65E-58 | -1.69E-46 |
| MS.gene049159 | MS.gene38844 | 0.82248 | 2.32E-53 | -1.69E-46 |
| MS.gene049341 | MS.gene38844 | 0.819474 | 1.14E-52 | -1.69E-46 |
| MS.gene049350 | MS.gene38844 | 0.845826 | 3.19E-59 | -1.69E-46 |
| MS.gene049368 | MS.gene38844 | 0.827151 | 1.83E-54 | -1.69E-46 |
| MS.gene049672 | MS.gene38844 | 0.812671 | 3.77E-51 | -1.69E-46 |
| MS.gene049711 | MS.gene38844 | 0.81178 | 5.90E-51 | -1.69E-46 |
| MS.gene049807 | MS.gene38844 | 0.810949 | 8.94E-51 | -1.69E-46 |
| MS.gene049808 | MS.gene38844 | 0.804486 | 2.11E-49 | -1.69E-46 |
| MS.gene049821 | MS.gene38844 | 0.83934 | 1.68E-57 | -1.69E-46 |
| MS.gene049825 | MS.gene38844 | 0.818641 | 1.76E-52 | -1.69E-46 |
| MS.gene049850 | MS.gene38844 | 0.83884 | 2.26E-57 | -1.69E-46 |
| MS.gene050020 | MS.gene38844 | 0.812327 | 4.48E-51 | -1.69E-46 |
| MS.gene050156 | MS.gene38844 | 0.805731 | 1.16E-49 | -1.69E-46 |
| MS.gene050551 | MS.gene38844 | 0.805629 | 1.22E-49 | -1.69E-46 |
| MS.gene050689 | MS.gene38844 | 0.842936 | 1.91E-58 | -1.69E-46 |
| MS.gene050807 | MS.gene38844 | 0.821278 | 4.40E-53 | -1.69E-46 |
| MS.gene051247 | MS.gene38844 | 0.81177 | 5.93E-51 | -1.69E-46 |
| MS.gene051279 | MS.gene38844 | 0.802193 | 6.30E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene38844 | 0.836926 | 7.03E-57 | -1.69E-46 |
| MS.gene05134 | MS.gene38844 | 0.806516 | 7.92E-50 | -1.69E-46 |
| MS.gene051363 | MS.gene38844 | 0.806363 | 8.53E-50 | -1.69E-46 |
| MS.gene051365 | MS.gene38844 | 0.815203 | 1.04E-51 | -1.69E-46 |
| MS.gene05157 | MS.gene38844 | 0.823893 | 1.08E-53 | -1.69E-46 |
| MS.gene051700 | MS.gene38844 | 0.834397 | 3.07E-56 | -1.69E-46 |
| MS.gene051719 | MS.gene38844 | 0.85026 | 1.91E-60 | -1.69E-46 |
| MS.gene051720 | MS.gene38844 | 0.852717 | 3.84E-61 | -1.69E-46 |
| MS.gene051744 | MS.gene38844 | 0.809745 | 1.63E-50 | -1.69E-46 |
| MS.gene051957 | MS.gene38844 | 0.804277 | 2.33E-49 | -1.69E-46 |
| MS.gene052020 | MS.gene38844 | 0.805437 | 1.34E-49 | -1.69E-46 |
| MS.gene052072 | MS.gene38844 | 0.805003 | 1.65E-49 | -1.69E-46 |
| MS.gene052133 | MS.gene38844 | 0.839189 | 1.84E-57 | -1.69E-46 |
| MS.gene052307 | MS.gene38844 | 0.801079 | 1.07E-48 | -1.69E-46 |
| MS.gene052516 | MS.gene38844 | 0.861996 | 6.93E-64 | -1.69E-46 |
| MS.gene052519 | MS.gene38844 | 0.831979 | 1.23E-55 | -1.69E-46 |
| MS.gene052584 | MS.gene38844 | 0.804553 | 2.04E-49 | -1.69E-46 |
| MS.gene052611 | MS.gene38844 | 0.826207 | 3.08E-54 | -1.69E-46 |
| MS.gene052665 | MS.gene38844 | 0.800684 | 1.28E-48 | -1.69E-46 |
| MS.gene052773 | MS.gene38844 | 0.818535 | 1.86E-52 | -1.69E-46 |
| MS.gene052863 | MS.gene38844 | 0.856624 | 2.84E-62 | -1.69E-46 |
| MS.gene052896 | MS.gene38844 | 0.837532 | 4.92E-57 | -1.69E-46 |
| MS.gene052947 | MS.gene38844 | 0.810306 | 1.23E-50 | -1.69E-46 |
| MS.gene053008 | MS.gene38844 | 0.83212 | 1.13E-55 | -1.69E-46 |
| MS.gene053079 | MS.gene38844 | 0.806588 | 7.65E-50 | -1.69E-46 |
| MS.gene053122 | MS.gene38844 | 0.810454 | 1.14E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene38844 | 0.809066 | 2.27E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene38844 | 0.853597 | 2.15E-61 | -1.69E-46 |
| MS.gene053541 | MS.gene38844 | 0.815638 | 8.35E-52 | -1.69E-46 |
| MS.gene053542 | MS.gene38844 | 0.828017 | 1.14E-54 | -1.69E-46 |
| MS.gene053581 | MS.gene38844 | 0.829426 | 5.18E-55 | -1.69E-46 |
| MS.gene053597 | MS.gene38844 | 0.82012 | 8.11E-53 | -1.69E-46 |
| MS.gene053599 | MS.gene38844 | 0.841441 | 4.74E-58 | -1.69E-46 |
| MS.gene05364 | MS.gene38844 | 0.837741 | 4.35E-57 | -1.69E-46 |
| MS.gene053678 | MS.gene38844 | 0.800443 | 1.44E-48 | -1.69E-46 |
| MS.gene053998 | MS.gene38844 | 0.806261 | 8.96E-50 | -1.69E-46 |
| MS.gene054472 | MS.gene38844 | 0.824821 | 6.56E-54 | -1.69E-46 |
| MS.gene05458 | MS.gene38844 | 0.824245 | 8.96E-54 | -1.69E-46 |
| MS.gene05462 | MS.gene38844 | 0.804153 | 2.48E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene38844 | 0.837041 | 6.57E-57 | -1.69E-46 |
| MS.gene054697 | MS.gene38844 | 0.801337 | 9.44E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene38844 | 0.802315 | 5.95E-49 | -1.69E-46 |
| MS.gene05517 | MS.gene38844 | 0.818216 | 2.20E-52 | -1.69E-46 |
| MS.gene055465 | MS.gene38844 | 0.848163 | 7.30E-60 | -1.69E-46 |
| MS.gene055466 | MS.gene38844 | 0.848435 | 6.14E-60 | -1.69E-46 |
| MS.gene055468 | MS.gene38844 | 0.847147 | 1.39E-59 | -1.69E-46 |
| MS.gene055469 | MS.gene38844 | 0.804405 | 2.20E-49 | -1.69E-46 |
| MS.gene055512 | MS.gene38844 | 0.867213 | 1.61E-65 | -1.69E-46 |
| MS.gene055555 | MS.gene38844 | 0.808112 | 3.63E-50 | -1.69E-46 |
| MS.gene055580 | MS.gene38844 | -0.828976 | 6.66E-55 | -1.69E-46 |
| MS.gene055778 | MS.gene38844 | 0.807123 | 5.89E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene38844 | 0.835664 | 1.47E-56 | -1.69E-46 |
| MS.gene055890 | MS.gene38844 | 0.817941 | 2.54E-52 | -1.69E-46 |
| MS.gene055891 | MS.gene38844 | 0.827531 | 1.49E-54 | -1.69E-46 |
| MS.gene056005 | MS.gene38844 | 0.811516 | 6.73E-51 | -1.69E-46 |
| MS.gene056043 | MS.gene38844 | -0.819165 | 1.34E-52 | -1.69E-46 |
| MS.gene056174 | MS.gene38844 | 0.816768 | 4.67E-52 | -1.69E-46 |
| MS.gene056215 | MS.gene38844 | 0.814742 | 1.32E-51 | -1.69E-46 |
| MS.gene056308 | MS.gene38844 | 0.831287 | 1.82E-55 | -1.69E-46 |
| MS.gene056366 | MS.gene38844 | 0.804897 | 1.73E-49 | -1.69E-46 |
| MS.gene056595 | MS.gene38844 | 0.802402 | 5.71E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene38844 | 0.813694 | 2.25E-51 | -1.69E-46 |
| MS.gene057060 | MS.gene38844 | 0.812732 | 3.66E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene38844 | 0.8247 | 7.00E-54 | -1.69E-46 |
| MS.gene057208 | MS.gene38844 | 0.800386 | 1.48E-48 | -1.69E-46 |
| MS.gene057287 | MS.gene38844 | 0.82649 | 2.64E-54 | -1.69E-46 |
| MS.gene057314 | MS.gene38844 | 0.801676 | 8.05E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene38844 | 0.818759 | 1.66E-52 | -1.69E-46 |
| MS.gene057446 | MS.gene38844 | 0.813541 | 2.43E-51 | -1.69E-46 |
| MS.gene057598 | MS.gene38844 | 0.816411 | 5.61E-52 | -1.69E-46 |
| MS.gene057693 | MS.gene38844 | 0.826686 | 2.37E-54 | -1.69E-46 |
| MS.gene057694 | MS.gene38844 | 0.803166 | 3.97E-49 | -1.69E-46 |
| MS.gene057705 | MS.gene38844 | 0.807623 | 4.62E-50 | -1.69E-46 |
| MS.gene057855 | MS.gene38844 | 0.819183 | 1.33E-52 | -1.69E-46 |
| MS.gene057915 | MS.gene38844 | 0.859784 | 3.26E-63 | -1.69E-46 |
| MS.gene058008 | MS.gene38844 | 0.811651 | 6.29E-51 | -1.69E-46 |
| MS.gene058009 | MS.gene38844 | 0.819403 | 1.18E-52 | -1.69E-46 |
| MS.gene058037 | MS.gene38844 | 0.808883 | 2.49E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene38844 | 0.849736 | 2.67E-60 | -1.69E-46 |
| MS.gene058636 | MS.gene38844 | 0.805 | 1.65E-49 | -1.69E-46 |
| MS.gene058783 | MS.gene38844 | 0.813345 | 2.68E-51 | -1.69E-46 |
| MS.gene058829 | MS.gene38844 | 0.803545 | 3.31E-49 | -1.69E-46 |
| MS.gene058852 | MS.gene38844 | 0.819712 | 1.01E-52 | -1.69E-46 |
| MS.gene058979 | MS.gene38844 | 0.803918 | 2.77E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene38844 | 0.803277 | 3.76E-49 | -1.69E-46 |
| MS.gene059725 | MS.gene38844 | 0.829725 | 4.38E-55 | -1.69E-46 |
| MS.gene05978 | MS.gene38844 | 0.85136 | 9.34E-61 | -1.69E-46 |
| MS.gene059842 | MS.gene38844 | 0.838538 | 2.71E-57 | -1.69E-46 |
| MS.gene059937 | MS.gene38844 | 0.814306 | 1.65E-51 | -1.69E-46 |
| MS.gene060365 | MS.gene38844 | 0.815444 | 9.22E-52 | -1.69E-46 |
| MS.gene060429 | MS.gene38844 | 0.843712 | 1.18E-58 | -1.69E-46 |
| MS.gene060521 | MS.gene38844 | 0.805859 | 1.09E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene38844 | 0.865049 | 7.82E-65 | -1.69E-46 |
| MS.gene060803 | MS.gene38844 | 0.801918 | 7.18E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene38844 | 0.812519 | 4.07E-51 | -1.69E-46 |
| MS.gene061100 | MS.gene38844 | 0.811738 | 6.02E-51 | -1.69E-46 |
| MS.gene061176 | MS.gene38844 | 0.805691 | 1.18E-49 | -1.69E-46 |
| MS.gene061177 | MS.gene38844 | 0.804141 | 2.49E-49 | -1.69E-46 |
| MS.gene061178 | MS.gene38844 | 0.805275 | 1.44E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene055771 | MS.gene38844 | PPI |
| MS.gene38844 | MS.gene013049 | PPI |
| MS.gene48433 | MS.gene38844 | PPI |
| MS.gene38844 | MS.gene031671 | PPI |
| MS.gene31419 | MS.gene38844 | PPI |
| MS.gene020412 | MS.gene38844 | PPI |
| MS.gene38844 | MS.gene006634 | PPI |
| MS.gene052174 | MS.gene38844 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38844.t1 | MTR_8g442420 | 97.521 | 605 | 15 | 0 | 1 | 605 | 1 | 605 | 0.0 | 1202 |
| MS.gene38844.t1 | MTR_6g084140 | 96.186 | 603 | 23 | 0 | 1 | 603 | 18 | 620 | 0.0 | 1182 |
| MS.gene38844.t1 | MTR_6g084140 | 96.186 | 603 | 23 | 0 | 1 | 603 | 1 | 603 | 0.0 | 1182 |
| MS.gene38844.t1 | MTR_7g105220 | 40.881 | 159 | 86 | 2 | 3 | 161 | 12 | 162 | 1.14e-33 | 126 |
| MS.gene38844.t1 | MTR_8g036015 | 38.554 | 166 | 94 | 2 | 1 | 166 | 1 | 158 | 4.26e-31 | 119 |
| MS.gene38844.t1 | MTR_5g015500 | 38.922 | 167 | 94 | 2 | 3 | 169 | 307 | 465 | 2.89e-30 | 125 |
| MS.gene38844.t1 | MTR_5g015500 | 38.922 | 167 | 94 | 2 | 3 | 169 | 347 | 505 | 3.08e-30 | 125 |
| MS.gene38844.t1 | MTR_2g085075 | 38.750 | 160 | 90 | 2 | 2 | 161 | 463 | 614 | 4.05e-29 | 122 |
| MS.gene38844.t1 | MTR_2g023120 | 41.071 | 168 | 89 | 5 | 3 | 168 | 15 | 174 | 1.59e-25 | 111 |
| MS.gene38844.t1 | MTR_7g095750 | 36.306 | 157 | 78 | 5 | 12 | 156 | 23 | 169 | 1.74e-21 | 99.4 |
| MS.gene38844.t1 | MTR_3g117750 | 38.323 | 167 | 82 | 6 | 9 | 164 | 25 | 181 | 1.74e-20 | 90.1 |
| MS.gene38844.t1 | MTR_7g116340 | 34.591 | 159 | 83 | 5 | 10 | 157 | 18 | 166 | 1.63e-19 | 86.7 |
| MS.gene38844.t1 | MTR_4g075290 | 36.709 | 158 | 79 | 7 | 10 | 156 | 18 | 165 | 7.70e-18 | 82.0 |
| MS.gene38844.t1 | MTR_3g463900 | 36.709 | 158 | 79 | 7 | 10 | 156 | 48 | 195 | 8.69e-18 | 82.4 |
| MS.gene38844.t1 | MTR_1g117010 | 39.216 | 153 | 78 | 6 | 9 | 156 | 93 | 235 | 1.44e-17 | 82.8 |
| MS.gene38844.t1 | MTR_1g117010 | 39.216 | 153 | 78 | 6 | 9 | 156 | 93 | 235 | 1.44e-17 | 82.8 |
| MS.gene38844.t1 | MTR_7g110980 | 40.602 | 133 | 66 | 5 | 8 | 136 | 108 | 231 | 2.59e-17 | 82.8 |
| MS.gene38844.t1 | MTR_4g073650 | 33.962 | 159 | 85 | 5 | 9 | 156 | 59 | 208 | 3.94e-17 | 81.3 |
| MS.gene38844.t1 | MTR_3g070500 | 36.250 | 160 | 81 | 7 | 8 | 156 | 76 | 225 | 6.67e-17 | 80.9 |
| MS.gene38844.t1 | MTR_8g079690 | 33.962 | 159 | 84 | 5 | 10 | 156 | 18 | 167 | 1.91e-16 | 81.6 |
| MS.gene38844.t1 | MTR_8g040180 | 33.113 | 151 | 82 | 5 | 10 | 150 | 32 | 173 | 3.89e-16 | 77.4 |
| MS.gene38844.t1 | MTR_1g085560 | 37.500 | 168 | 83 | 9 | 8 | 167 | 97 | 250 | 5.18e-16 | 78.6 |
| MS.gene38844.t1 | MTR_4g086760 | 30.189 | 159 | 90 | 4 | 10 | 156 | 18 | 167 | 1.04e-15 | 79.0 |
| MS.gene38844.t1 | MTR_4g086760 | 30.189 | 159 | 90 | 4 | 10 | 156 | 18 | 167 | 1.21e-15 | 79.3 |
| MS.gene38844.t1 | MTR_4g086760 | 30.189 | 159 | 90 | 4 | 10 | 156 | 18 | 167 | 1.37e-15 | 78.6 |
| MS.gene38844.t1 | MTR_3g107660 | 32.484 | 157 | 84 | 5 | 12 | 156 | 26 | 172 | 1.88e-13 | 73.9 |
| MS.gene38844.t1 | MTR_1g011980 | 31.847 | 157 | 84 | 5 | 12 | 156 | 23 | 168 | 3.77e-13 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38844.t1 | AT1G53720 | 75.682 | 440 | 95 | 4 | 1 | 437 | 1 | 431 | 0.0 | 682 |
| MS.gene38844.t1 | AT1G53720 | 85.163 | 337 | 50 | 0 | 1 | 337 | 1 | 337 | 0.0 | 612 |
| MS.gene38844.t1 | AT1G53780 | 50.446 | 224 | 91 | 3 | 78 | 301 | 4 | 207 | 1.99e-53 | 193 |
| MS.gene38844.t1 | AT1G53780 | 48.058 | 206 | 87 | 3 | 96 | 301 | 1 | 186 | 3.74e-43 | 164 |
| MS.gene38844.t1 | AT1G53780 | 48.058 | 206 | 87 | 3 | 96 | 301 | 1 | 186 | 4.13e-43 | 164 |
| MS.gene38844.t1 | AT1G53780 | 48.058 | 206 | 87 | 3 | 96 | 301 | 1 | 186 | 4.13e-43 | 164 |
| MS.gene38844.t1 | AT2G36130 | 42.500 | 160 | 84 | 3 | 3 | 162 | 12 | 163 | 1.34e-36 | 134 |
| MS.gene38844.t1 | AT1G01940 | 38.554 | 166 | 94 | 2 | 1 | 166 | 1 | 158 | 8.15e-31 | 118 |
| MS.gene38844.t1 | AT3G44600 | 40.000 | 160 | 88 | 2 | 2 | 161 | 477 | 628 | 2.11e-29 | 124 |
| MS.gene38844.t1 | AT5G67530 | 38.750 | 160 | 90 | 2 | 7 | 166 | 350 | 501 | 6.62e-28 | 119 |
| MS.gene38844.t1 | AT4G33060 | 38.462 | 169 | 93 | 5 | 3 | 168 | 15 | 175 | 1.41e-26 | 114 |
| MS.gene38844.t1 | AT2G21130 | 37.736 | 159 | 76 | 6 | 10 | 156 | 19 | 166 | 6.33e-22 | 93.6 |
| MS.gene38844.t1 | AT4G38740 | 38.365 | 159 | 75 | 7 | 10 | 156 | 18 | 165 | 1.88e-21 | 92.4 |
| MS.gene38844.t1 | AT5G13120 | 40.789 | 152 | 75 | 6 | 10 | 156 | 107 | 248 | 4.07e-20 | 90.9 |
| MS.gene38844.t1 | AT5G13120 | 40.789 | 152 | 75 | 6 | 10 | 156 | 103 | 244 | 4.26e-20 | 90.9 |
| MS.gene38844.t1 | AT3G63400 | 33.140 | 172 | 88 | 6 | 2 | 156 | 8 | 169 | 1.67e-19 | 92.8 |
| MS.gene38844.t1 | AT3G63400 | 33.140 | 172 | 88 | 6 | 2 | 156 | 8 | 169 | 1.67e-19 | 92.8 |
| MS.gene38844.t1 | AT3G63400 | 33.140 | 172 | 88 | 6 | 2 | 156 | 8 | 169 | 1.67e-19 | 92.8 |
| MS.gene38844.t1 | AT3G63400 | 33.140 | 172 | 88 | 6 | 2 | 156 | 8 | 169 | 2.43e-19 | 90.9 |
| MS.gene38844.t1 | AT2G16600 | 38.125 | 160 | 78 | 6 | 8 | 156 | 17 | 166 | 2.97e-19 | 85.9 |
| MS.gene38844.t1 | AT2G29960 | 35.000 | 160 | 83 | 5 | 8 | 156 | 44 | 193 | 9.01e-19 | 85.5 |
| MS.gene38844.t1 | AT2G29960 | 35.000 | 160 | 83 | 5 | 8 | 156 | 44 | 193 | 9.01e-19 | 85.5 |
| MS.gene38844.t1 | AT3G56070 | 34.132 | 167 | 89 | 6 | 10 | 165 | 18 | 174 | 1.27e-18 | 84.3 |
| MS.gene38844.t1 | AT3G56070 | 34.132 | 167 | 89 | 6 | 10 | 165 | 18 | 174 | 1.27e-18 | 84.3 |
| MS.gene38844.t1 | AT5G58710 | 35.000 | 160 | 83 | 7 | 8 | 156 | 47 | 196 | 9.95e-18 | 82.4 |
| MS.gene38844.t1 | AT4G34870 | 35.333 | 150 | 77 | 5 | 7 | 145 | 15 | 155 | 1.90e-17 | 80.9 |
| MS.gene38844.t1 | AT3G62030 | 42.748 | 131 | 62 | 7 | 10 | 136 | 108 | 229 | 3.32e-17 | 82.4 |
| MS.gene38844.t1 | AT3G62030 | 42.748 | 131 | 62 | 7 | 10 | 136 | 109 | 230 | 3.40e-17 | 82.4 |
| MS.gene38844.t1 | AT3G62030 | 42.748 | 131 | 62 | 7 | 10 | 136 | 162 | 283 | 9.18e-17 | 82.0 |
| MS.gene38844.t1 | AT4G34960 | 32.704 | 159 | 87 | 4 | 9 | 156 | 60 | 209 | 1.80e-16 | 79.3 |
| MS.gene38844.t1 | AT3G55920 | 37.342 | 158 | 78 | 7 | 10 | 156 | 73 | 220 | 2.02e-16 | 79.3 |
| MS.gene38844.t1 | AT2G15790 | 33.333 | 159 | 85 | 4 | 10 | 156 | 18 | 167 | 2.64e-16 | 81.3 |
| MS.gene38844.t1 | AT2G16600 | 37.584 | 149 | 72 | 6 | 8 | 156 | 17 | 144 | 1.66e-15 | 74.7 |
| MS.gene38844.t1 | AT4G32420 | 32.857 | 140 | 73 | 4 | 12 | 139 | 23 | 153 | 6.43e-14 | 75.5 |
| MS.gene38844.t1 | AT2G29960 | 32.500 | 160 | 77 | 6 | 8 | 156 | 44 | 183 | 9.45e-13 | 67.8 |
| MS.gene38844.t1 | AT1G44478 | 57.407 | 54 | 20 | 2 | 39 | 89 | 14 | 67 | 2.10e-12 | 66.6 |
Find 137 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATTGTTCAGGTTTCTTTA+TGG | 0.175651 | 8.4:-52251765 | MS.gene38844:intron |
| TGGTGTTTCGTTTCTCTCTT+TGG | 0.223934 | 8.4:+52246302 | None:intergenic |
| CCTTTCTATGTCTTTCTTCT+CGG | 0.246720 | 8.4:+52246079 | None:intergenic |
| ATACATGCGGAAAGATAATA+AGG | 0.255757 | 8.4:-52246706 | MS.gene38844:CDS |
| TTTCCTTCTGGTGAAGCTTC+AGG | 0.292417 | 8.4:+52249495 | None:intergenic |
| CGTTTGTAATCATCGCCATC+TGG | 0.307386 | 8.4:+52245828 | None:intergenic |
| GATCAAAGGAAGCACATTCT+AGG | 0.318080 | 8.4:-52248366 | MS.gene38844:CDS |
| GCCTTCCTTACCTCGTCTTT+AGG | 0.327686 | 8.4:+52249471 | None:intergenic |
| GATAAAGCGCGACTGGAAAA+AGG | 0.337532 | 8.4:-52246125 | MS.gene38844:CDS |
| GGAGGGATGACAGAGATTAT+AGG | 0.338284 | 8.4:-52245914 | MS.gene38844:CDS |
| CAAGATGTGAAGGTTGATTC+TGG | 0.347476 | 8.4:-52245867 | MS.gene38844:CDS |
| TTCTTCTCGGCATGAAAATC+CGG | 0.359767 | 8.4:+52246092 | None:intergenic |
| CGCCATCCCTTTCATATCTC+TGG | 0.367202 | 8.4:+52246282 | None:intergenic |
| GATGACCTTGATTACCTTGA+TGG | 0.383546 | 8.4:-52251458 | MS.gene38844:CDS |
| AGCAGAGGGCTTGAAGGAAA+TGG | 0.385620 | 8.4:-52246152 | MS.gene38844:CDS |
| TTTATCATGAAGGACAATAA+TGG | 0.400575 | 8.4:-52246471 | MS.gene38844:CDS |
| GTACTGATGGTGACGAGTTT+AGG | 0.401231 | 8.4:-52253215 | MS.gene38844:CDS |
| TGGGTTTAATTGTTCATCCA+TGG | 0.402075 | 8.4:+52248411 | None:intergenic |
| GAAAACGAAGCCCGGATGAT+GGG | 0.417629 | 8.4:-52245752 | MS.gene38844:CDS |
| GAAGATGTGAAGATTGATTC+CGG | 0.425382 | 8.4:-52245780 | MS.gene38844:CDS |
| TTTATTTCACACTGTTCAAA+AGG | 0.430598 | 8.4:-52253011 | MS.gene38844:CDS |
| GAAAGACATAGAAAGGCATA+TGG | 0.432372 | 8.4:-52246072 | MS.gene38844:CDS |
| GACAGAGTTCGAAGACAAAC+TGG | 0.432726 | 8.4:-52247306 | MS.gene38844:intron |
| TTCATGGTGTAGATACGAAA+TGG | 0.436440 | 8.4:-52246351 | MS.gene38844:intron |
| GAAGGACAATAATGGCCAAC+GGG | 0.437166 | 8.4:-52246463 | MS.gene38844:CDS |
| TTCTTTATGGTGACCAAGCT+CGG | 0.438980 | 8.4:-52251752 | MS.gene38844:CDS |
| TCATAGAGGTCGTAGGGATC+AGG | 0.444751 | 8.4:-52246216 | MS.gene38844:CDS |
| GGGAAGGTCGTGAACATAGA+AGG | 0.446283 | 8.4:-52245686 | MS.gene38844:CDS |
| GGGTTTAATTGTTCATCCAT+GGG | 0.447168 | 8.4:+52248412 | None:intergenic |
| ATAACCTCTTCAAGTTCTCC+TGG | 0.449225 | 8.4:+52248391 | None:intergenic |
| CGTTTGTAATCCCCATCATC+CGG | 0.450429 | 8.4:+52245741 | None:intergenic |
| GATCATCAAAAGGATCTTCC+AGG | 0.462705 | 8.4:+52249541 | None:intergenic |
| AGATTACCCACCTCAGTAAC+CGG | 0.469687 | 8.4:+52248170 | None:intergenic |
| CATATTGCTAAGGATTGTAC+TGG | 0.473329 | 8.4:-52246522 | MS.gene38844:CDS |
| AAGGCTCGAATAACAGAGAT+AGG | 0.478888 | 8.4:-52246187 | MS.gene38844:CDS |
| TGTCATCCCTCCTATCCAAA+TGG | 0.486825 | 8.4:+52245925 | None:intergenic |
| GATCTAAAGCATTCTAAGAC+TGG | 0.487196 | 8.4:-52251705 | MS.gene38844:CDS |
| GAGGCTTATGCCGATGGAAA+GGG | 0.489014 | 8.4:-52249708 | MS.gene38844:CDS |
| GCGATGATTACAAACGTAGA+AGG | 0.490035 | 8.4:-52245821 | MS.gene38844:CDS |
| AGAAAACGAAGCCCGGATGA+TGG | 0.490180 | 8.4:-52245753 | MS.gene38844:CDS |
| TCCTATGTCTGTAATCCTCA+TGG | 0.495780 | 8.4:+52245709 | None:intergenic |
| TTACTGTGTGCTTTCCATCA+AGG | 0.495953 | 8.4:+52251444 | None:intergenic |
| GACTTTGACTAGAATTAATG+AGG | 0.499789 | 8.4:-52249727 | MS.gene38844:CDS |
| GATAGAAGCAGAGGGCTTGA+AGG | 0.500538 | 8.4:-52246158 | MS.gene38844:CDS |
| AGAGAATTTGAATGCTTCAC+AGG | 0.509447 | 8.4:-52251658 | MS.gene38844:intron |
| GAATGGTCTTCCCTTTCCAT+CGG | 0.511903 | 8.4:+52249698 | None:intergenic |
| TGGAGATGATAAAGCGCGAC+TGG | 0.512308 | 8.4:-52246132 | MS.gene38844:CDS |
| GACGGGCTAGTCGAGATGAT+AGG | 0.512324 | 8.4:-52245965 | MS.gene38844:CDS |
| GGAGGTTTAACCTCAGCATC+AGG | 0.513231 | 8.4:+52248224 | None:intergenic |
| TGAAGAGGTTATTAGATCAA+AGG | 0.514059 | 8.4:-52248380 | MS.gene38844:CDS |
| AAGTCCGACTTGAAGATGAT+TGG | 0.517976 | 8.4:-52248438 | MS.gene38844:CDS |
| TGAGGCTTATGCCGATGGAA+AGG | 0.522232 | 8.4:-52249709 | MS.gene38844:CDS |
| CCGAGAAGAAAGACATAGAA+AGG | 0.522536 | 8.4:-52246079 | MS.gene38844:CDS |
| AGCTGAGGAGGATCATCAAA+AGG | 0.523659 | 8.4:+52249531 | None:intergenic |
| AGACAAACTGGCATGTGAGC+AGG | 0.532699 | 8.4:-52247294 | MS.gene38844:CDS |
| ATCAAAGGAAGCACATTCTA+GGG | 0.534373 | 8.4:-52248365 | MS.gene38844:CDS |
| TAACCTCTTCAAGTTCTCCT+GGG | 0.534396 | 8.4:+52248392 | None:intergenic |
| ATGACAGCCATTTGGATAGG+AGG | 0.535172 | 8.4:-52245932 | MS.gene38844:CDS |
| GTCAAAGTGTTTCAAAACTG+TGG | 0.535669 | 8.4:-52246734 | MS.gene38844:CDS |
| AGGTCGTAGGGATCAGGAGA+TGG | 0.537909 | 8.4:-52246210 | MS.gene38844:CDS |
| ATGATAGTCATAGAGGTCGT+AGG | 0.538687 | 8.4:-52246223 | MS.gene38844:CDS |
| GCTCAGACTGGTGATCCTAC+TGG | 0.539336 | 8.4:-52252980 | MS.gene38844:CDS |
| TTAGGATCAAGTATTACAAT+GGG | 0.541981 | 8.4:-52253036 | MS.gene38844:intron |
| ATCATTCGTGATCACAAGAC+TGG | 0.543603 | 8.4:-52247896 | MS.gene38844:CDS |
| ACCCACAAAATTTATCATGA+AGG | 0.545661 | 8.4:-52246481 | MS.gene38844:CDS |
| CGAAACACCAGAGATATGAA+AGG | 0.546043 | 8.4:-52246289 | MS.gene38844:CDS |
| TTTAAAGATGATAGTCATAG+AGG | 0.548618 | 8.4:-52246230 | MS.gene38844:CDS |
| ATGCTTTGATTGATGATCGA+AGG | 0.550568 | 8.4:-52246773 | MS.gene38844:CDS |
| ATTAGGATCAAGTATTACAA+TGG | 0.552906 | 8.4:-52253037 | MS.gene38844:intron |
| ATTCCTGAAGCTTCACCAGA+AGG | 0.553060 | 8.4:-52249498 | MS.gene38844:CDS |
| ATTAATGAGGCTTATGCCGA+TGG | 0.553811 | 8.4:-52249714 | MS.gene38844:CDS |
| GACAATAATGGCCAACGGGG+TGG | 0.555935 | 8.4:-52246459 | MS.gene38844:CDS |
| TGAAGATGATTGGGTGCCCA+TGG | 0.556542 | 8.4:-52248428 | MS.gene38844:CDS |
| AGAAGAAAACGAAGCCCAGA+TGG | 0.556598 | 8.4:-52245843 | MS.gene38844:CDS |
| GCTTTCCATCAAGGTAATCA+AGG | 0.559427 | 8.4:+52251453 | None:intergenic |
| GTTTGTAATCCCCATCATCC+GGG | 0.559720 | 8.4:+52245742 | None:intergenic |
| TTCCACAGATCATATTGCTA+AGG | 0.559747 | 8.4:-52246532 | MS.gene38844:CDS |
| CCTACTGGAACTGCCACTGC+CGG | 0.561223 | 8.4:-52252965 | MS.gene38844:CDS |
| TTGCTTTATCTCCACCCCGT+TGG | 0.561487 | 8.4:+52246448 | None:intergenic |
| CAGTGGAAGGCAAGATGTGA+AGG | 0.561529 | 8.4:-52245877 | MS.gene38844:CDS |
| AATCAAGCACACTTACATCC+TGG | 0.562265 | 8.4:-52249559 | MS.gene38844:CDS |
| TGACAGCCATTTGGATAGGA+GGG | 0.564950 | 8.4:-52245931 | MS.gene38844:CDS |
| GAAACACCAGAGATATGAAA+GGG | 0.567909 | 8.4:-52246288 | MS.gene38844:CDS |
| TGATAGTCATAGAGGTCGTA+GGG | 0.569876 | 8.4:-52246222 | MS.gene38844:CDS |
| ATTCTCTCCTGCACTAGCCA+TGG | 0.569975 | 8.4:+52251674 | None:intergenic |
| AGTCCGACTTGAAGATGATT+GGG | 0.570247 | 8.4:-52248437 | MS.gene38844:CDS |
| GTTTGTAATCATCGCCATCT+GGG | 0.573839 | 8.4:+52245829 | None:intergenic |
| CGGACGAAGAAAACGAAGCC+CGG | 0.575786 | 8.4:-52245760 | MS.gene38844:CDS |
| TACATGCGGAAAGATAATAA+GGG | 0.576638 | 8.4:-52246705 | MS.gene38844:intron |
| AAAGACATAGAAAGGCATAT+GGG | 0.577796 | 8.4:-52246071 | MS.gene38844:CDS |
| AGAGAACTGAAGACAGTGGA+AGG | 0.586603 | 8.4:-52245890 | MS.gene38844:CDS |
| CAGATGACAGCCATTTGGAT+AGG | 0.587905 | 8.4:-52245935 | MS.gene38844:CDS |
| GTAGATAGAATCACCGGCAG+TGG | 0.589735 | 8.4:+52252952 | None:intergenic |
| AAAACGAAGCCCGGATGATG+GGG | 0.591110 | 8.4:-52245751 | MS.gene38844:CDS |
| TGATAGATACACAGAAAGAC+GGG | 0.593289 | 8.4:-52245982 | MS.gene38844:CDS |
| ATGGGGATTACAAACGTGGA+AGG | 0.597862 | 8.4:-52245734 | MS.gene38844:CDS |
| ATCCTTAGCAATATGATCTG+TGG | 0.600370 | 8.4:+52246530 | None:intergenic |
| ATGATAGATACACAGAAAGA+CGG | 0.600911 | 8.4:-52245983 | MS.gene38844:CDS |
| ACATAGAAAGGCATATGGGA+AGG | 0.602371 | 8.4:-52246067 | MS.gene38844:CDS |
| ATGAACTCAGGTAGCTGAGG+AGG | 0.602991 | 8.4:+52249519 | None:intergenic |
| ATGAGGATTACAGACATAGG+AGG | 0.605188 | 8.4:-52245707 | MS.gene38844:CDS |
| TGGGGATATTCCTGATGCTG+AGG | 0.605190 | 8.4:-52248234 | MS.gene38844:CDS |
| ACTGTTGCCATGGCTAGTGC+AGG | 0.608593 | 8.4:-52251681 | MS.gene38844:CDS |
| TAAGACTGGAACTGTTGCCA+TGG | 0.613040 | 8.4:-52251691 | MS.gene38844:CDS |
| AGTCTAGCTCATCTTTCCGC+CGG | 0.613530 | 8.4:+52246024 | None:intergenic |
| CAAGCCCTCTGCTTCTATCG+CGG | 0.620695 | 8.4:+52246162 | None:intergenic |
| GATTACAGACATAGGAGGGA+AGG | 0.622385 | 8.4:-52245702 | MS.gene38844:CDS |
| GGTGGTGGTTGCTTCAAATG+TGG | 0.622769 | 8.4:-52246555 | MS.gene38844:CDS |
| CACCAGAGATATGAAAGGGA+TGG | 0.622791 | 8.4:-52246284 | MS.gene38844:CDS |
| CGTAGGGATCAGGAGATGGA+AGG | 0.623530 | 8.4:-52246206 | MS.gene38844:CDS |
| AGGCACCGCGATAGAAGCAG+AGG | 0.623589 | 8.4:-52246167 | MS.gene38844:CDS |
| TGAAGGACAATAATGGCCAA+CGG | 0.625222 | 8.4:-52246464 | MS.gene38844:CDS |
| AGGAAGAGAACTGAAGACAG+TGG | 0.625301 | 8.4:-52245894 | MS.gene38844:CDS |
| GACGTCGAGATGATGACTAC+CGG | 0.626213 | 8.4:-52246043 | MS.gene38844:CDS |
| TTACTTGTAGATAGAATCAC+CGG | 0.628207 | 8.4:+52252946 | None:intergenic |
| AACTGTGGTCACAATACATG+CGG | 0.633456 | 8.4:-52246719 | MS.gene38844:CDS |
| AAACCCAGGAGAACTTGAAG+AGG | 0.634019 | 8.4:-52248395 | MS.gene38844:CDS |
| GAAGCTTCAGGAATGAACTC+AGG | 0.635520 | 8.4:+52249507 | None:intergenic |
| TGGGGATTACAAACGTGGAA+GGG | 0.636249 | 8.4:-52245733 | MS.gene38844:CDS |
| AACGGGGTGGAGATAAAGCA+AGG | 0.636526 | 8.4:-52246446 | MS.gene38844:intron |
| CCGGCAGTGGCAGTTCCAGT+AGG | 0.638131 | 8.4:+52252965 | None:intergenic |
| TAAATTGAATCCGGTTACTG+AGG | 0.648422 | 8.4:-52248180 | MS.gene38844:intron |
| GGTGACGAGTTTAGGCGACA+TGG | 0.649376 | 8.4:-52253207 | MS.gene38844:CDS |
| GGAATGAACTCAGGTAGCTG+AGG | 0.654315 | 8.4:+52249516 | None:intergenic |
| TGAGGATTACAGACATAGGA+GGG | 0.662466 | 8.4:-52245706 | MS.gene38844:CDS |
| ACCATGAGGATTACAGACAT+AGG | 0.668184 | 8.4:-52245710 | MS.gene38844:CDS |
| GCACCCAATCATCTTCAAGT+CGG | 0.669949 | 8.4:+52248434 | None:intergenic |
| CAGAGATATGAAAGGGATGG+CGG | 0.670850 | 8.4:-52246281 | MS.gene38844:CDS |
| CAAACGTAGAAGGAATGATG+AGG | 0.682353 | 8.4:-52245811 | MS.gene38844:CDS |
| ATGGATGAACAATTAAACCC+AGG | 0.685321 | 8.4:-52248409 | MS.gene38844:CDS |
| GATGATGGGGATTACAAACG+TGG | 0.687670 | 8.4:-52245738 | MS.gene38844:CDS |
| TGATGATCGAAGGATACATG+TGG | 0.693355 | 8.4:-52246763 | MS.gene38844:CDS |
| GGCACCGCGATAGAAGCAGA+GGG | 0.697961 | 8.4:-52246166 | MS.gene38844:CDS |
| AGAAGGAAAACCTAAAGACG+AGG | 0.723882 | 8.4:-52249481 | MS.gene38844:intron |
| GTCGAGATGATGACTACCGG+CGG | 0.729255 | 8.4:-52246040 | MS.gene38844:CDS |
| AAGGACAATAATGGCCAACG+GGG | 0.743691 | 8.4:-52246462 | MS.gene38844:CDS |
| CAAACGTGGAAGGGACCATG+AGG | 0.747318 | 8.4:-52245724 | MS.gene38844:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 52245680 | 52253243 | 52245680 | ID=MS.gene38844 |
| chr8.4 | mRNA | 52245680 | 52253243 | 52245680 | ID=MS.gene38844.t1;Parent=MS.gene38844 |
| chr8.4 | exon | 52253146 | 52253243 | 52253146 | ID=MS.gene38844.t1.exon1;Parent=MS.gene38844.t1 |
| chr8.4 | CDS | 52253146 | 52253243 | 52253146 | ID=cds.MS.gene38844.t1;Parent=MS.gene38844.t1 |
| chr8.4 | exon | 52252950 | 52253054 | 52252950 | ID=MS.gene38844.t1.exon2;Parent=MS.gene38844.t1 |
| chr8.4 | CDS | 52252950 | 52253054 | 52252950 | ID=cds.MS.gene38844.t1;Parent=MS.gene38844.t1 |
| chr8.4 | exon | 52251659 | 52251776 | 52251659 | ID=MS.gene38844.t1.exon3;Parent=MS.gene38844.t1 |
| chr8.4 | CDS | 52251659 | 52251776 | 52251659 | ID=cds.MS.gene38844.t1;Parent=MS.gene38844.t1 |
| chr8.4 | exon | 52251448 | 52251498 | 52251448 | ID=MS.gene38844.t1.exon4;Parent=MS.gene38844.t1 |
| chr8.4 | CDS | 52251448 | 52251498 | 52251448 | ID=cds.MS.gene38844.t1;Parent=MS.gene38844.t1 |
| chr8.4 | exon | 52249687 | 52249778 | 52249687 | ID=MS.gene38844.t1.exon5;Parent=MS.gene38844.t1 |
| chr8.4 | CDS | 52249687 | 52249778 | 52249687 | ID=cds.MS.gene38844.t1;Parent=MS.gene38844.t1 |
| chr8.4 | exon | 52249482 | 52249581 | 52249482 | ID=MS.gene38844.t1.exon6;Parent=MS.gene38844.t1 |
| chr8.4 | CDS | 52249482 | 52249581 | 52249482 | ID=cds.MS.gene38844.t1;Parent=MS.gene38844.t1 |
| chr8.4 | exon | 52248348 | 52248470 | 52248348 | ID=MS.gene38844.t1.exon7;Parent=MS.gene38844.t1 |
| chr8.4 | CDS | 52248348 | 52248470 | 52248348 | ID=cds.MS.gene38844.t1;Parent=MS.gene38844.t1 |
| chr8.4 | exon | 52248181 | 52248258 | 52248181 | ID=MS.gene38844.t1.exon8;Parent=MS.gene38844.t1 |
| chr8.4 | CDS | 52248181 | 52248258 | 52248181 | ID=cds.MS.gene38844.t1;Parent=MS.gene38844.t1 |
| chr8.4 | exon | 52248013 | 52248059 | 52248013 | ID=MS.gene38844.t1.exon9;Parent=MS.gene38844.t1 |
| chr8.4 | CDS | 52248013 | 52248059 | 52248013 | ID=cds.MS.gene38844.t1;Parent=MS.gene38844.t1 |
| chr8.4 | exon | 52247870 | 52247925 | 52247870 | ID=MS.gene38844.t1.exon10;Parent=MS.gene38844.t1 |
| chr8.4 | CDS | 52247870 | 52247925 | 52247870 | ID=cds.MS.gene38844.t1;Parent=MS.gene38844.t1 |
| chr8.4 | exon | 52247283 | 52247323 | 52247283 | ID=MS.gene38844.t1.exon11;Parent=MS.gene38844.t1 |
| chr8.4 | CDS | 52247283 | 52247323 | 52247283 | ID=cds.MS.gene38844.t1;Parent=MS.gene38844.t1 |
| chr8.4 | exon | 52246706 | 52246802 | 52246706 | ID=MS.gene38844.t1.exon12;Parent=MS.gene38844.t1 |
| chr8.4 | CDS | 52246706 | 52246802 | 52246706 | ID=cds.MS.gene38844.t1;Parent=MS.gene38844.t1 |
| chr8.4 | exon | 52246447 | 52246576 | 52246447 | ID=MS.gene38844.t1.exon13;Parent=MS.gene38844.t1 |
| chr8.4 | CDS | 52246447 | 52246576 | 52246447 | ID=cds.MS.gene38844.t1;Parent=MS.gene38844.t1 |
| chr8.4 | exon | 52245680 | 52246361 | 52245680 | ID=MS.gene38844.t1.exon14;Parent=MS.gene38844.t1 |
| chr8.4 | CDS | 52245680 | 52246361 | 52245680 | ID=cds.MS.gene38844.t1;Parent=MS.gene38844.t1 |
| Gene Sequence |
| Protein sequence |
