Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85246.t1 | XP_003597552.1 | 99.6 | 250 | 1 | 0 | 1 | 250 | 1 | 250 | 1.30E-109 | 406 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85246.t1 | O81488 | 83.3 | 246 | 39 | 2 | 6 | 250 | 10 | 254 | 1.8e-88 | 327.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85246.t1 | A0FK63 | 99.6 | 250 | 1 | 0 | 1 | 250 | 1 | 250 | 9.2e-110 | 406.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene85246.t1 | TF | Alfin-like |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene85246 | 0.822049 | 2.92E-53 | -1.69E-46 |
| MS.gene04918 | MS.gene85246 | 0.803846 | 2.87E-49 | -1.69E-46 |
| MS.gene04920 | MS.gene85246 | 0.809078 | 2.26E-50 | -1.69E-46 |
| MS.gene049254 | MS.gene85246 | 0.812467 | 4.18E-51 | -1.69E-46 |
| MS.gene049283 | MS.gene85246 | 0.833211 | 6.07E-56 | -1.69E-46 |
| MS.gene049368 | MS.gene85246 | 0.824058 | 9.91E-54 | -1.69E-46 |
| MS.gene049983 | MS.gene85246 | 0.802437 | 5.61E-49 | -1.69E-46 |
| MS.gene050085 | MS.gene85246 | 0.81282 | 3.50E-51 | -1.69E-46 |
| MS.gene050654 | MS.gene85246 | 0.802925 | 4.45E-49 | -1.69E-46 |
| MS.gene050689 | MS.gene85246 | 0.82876 | 7.51E-55 | -1.69E-46 |
| MS.gene050752 | MS.gene85246 | 0.840961 | 6.34E-58 | -1.69E-46 |
| MS.gene050838 | MS.gene85246 | 0.824098 | 9.70E-54 | -1.69E-46 |
| MS.gene050945 | MS.gene85246 | 0.839704 | 1.35E-57 | -1.69E-46 |
| MS.gene050955 | MS.gene85246 | 0.816927 | 4.30E-52 | -1.69E-46 |
| MS.gene051003 | MS.gene85246 | 0.858088 | 1.05E-62 | -1.69E-46 |
| MS.gene051233 | MS.gene85246 | 0.802515 | 5.41E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene85246 | 0.818211 | 2.21E-52 | -1.69E-46 |
| MS.gene051328 | MS.gene85246 | 0.800337 | 1.51E-48 | -1.69E-46 |
| MS.gene051343 | MS.gene85246 | 0.881983 | 1.52E-70 | -1.69E-46 |
| MS.gene05134 | MS.gene85246 | 0.815294 | 9.95E-52 | -1.69E-46 |
| MS.gene051363 | MS.gene85246 | 0.820966 | 5.19E-53 | -1.69E-46 |
| MS.gene051365 | MS.gene85246 | 0.804667 | 1.94E-49 | -1.69E-46 |
| MS.gene051597 | MS.gene85246 | 0.828152 | 1.05E-54 | -1.69E-46 |
| MS.gene051676 | MS.gene85246 | 0.867796 | 1.05E-65 | -1.69E-46 |
| MS.gene051700 | MS.gene85246 | 0.804889 | 1.74E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene85246 | 0.832692 | 8.17E-56 | -1.69E-46 |
| MS.gene05188 | MS.gene85246 | 0.894344 | 2.69E-75 | -1.69E-46 |
| MS.gene051902 | MS.gene85246 | 0.836376 | 9.70E-57 | -1.69E-46 |
| MS.gene051903 | MS.gene85246 | 0.802823 | 4.67E-49 | -1.69E-46 |
| MS.gene051975 | MS.gene85246 | 0.985855 | 6.98E-165 | -1.69E-46 |
| MS.gene052012 | MS.gene85246 | 0.808274 | 3.36E-50 | -1.69E-46 |
| MS.gene052072 | MS.gene85246 | 0.833878 | 4.14E-56 | -1.69E-46 |
| MS.gene052434 | MS.gene85246 | 0.83576 | 1.39E-56 | -1.69E-46 |
| MS.gene052947 | MS.gene85246 | 0.833093 | 6.50E-56 | -1.69E-46 |
| MS.gene052954 | MS.gene85246 | 0.801698 | 7.96E-49 | -1.69E-46 |
| MS.gene053006 | MS.gene85246 | 0.804937 | 1.70E-49 | -1.69E-46 |
| MS.gene053058 | MS.gene85246 | 0.869675 | 2.59E-66 | -1.69E-46 |
| MS.gene053226 | MS.gene85246 | 0.844432 | 7.59E-59 | -1.69E-46 |
| MS.gene053298 | MS.gene85246 | 0.817 | 4.14E-52 | -1.69E-46 |
| MS.gene053564 | MS.gene85246 | 0.834707 | 2.57E-56 | -1.69E-46 |
| MS.gene05364 | MS.gene85246 | 0.825365 | 4.88E-54 | -1.69E-46 |
| MS.gene053931 | MS.gene85246 | 0.834656 | 2.64E-56 | -1.69E-46 |
| MS.gene053963 | MS.gene85246 | 0.813461 | 2.53E-51 | -1.69E-46 |
| MS.gene054222 | MS.gene85246 | 0.802245 | 6.15E-49 | -1.69E-46 |
| MS.gene054403 | MS.gene85246 | 0.842224 | 2.95E-58 | -1.69E-46 |
| MS.gene05458 | MS.gene85246 | 0.804114 | 2.52E-49 | -1.69E-46 |
| MS.gene054657 | MS.gene85246 | 0.801772 | 7.69E-49 | -1.69E-46 |
| MS.gene05469 | MS.gene85246 | 0.8538 | 1.88E-61 | -1.69E-46 |
| MS.gene054957 | MS.gene85246 | 0.806842 | 6.76E-50 | -1.69E-46 |
| MS.gene05517 | MS.gene85246 | 0.849277 | 3.58E-60 | -1.69E-46 |
| MS.gene055311 | MS.gene85246 | 0.85063 | 1.50E-60 | -1.69E-46 |
| MS.gene055313 | MS.gene85246 | 0.866133 | 3.56E-65 | -1.69E-46 |
| MS.gene055314 | MS.gene85246 | 0.844077 | 9.45E-59 | -1.69E-46 |
| MS.gene055513 | MS.gene85246 | 0.848797 | 4.87E-60 | -1.69E-46 |
| MS.gene055603 | MS.gene85246 | 0.850469 | 1.66E-60 | -1.69E-46 |
| MS.gene055623 | MS.gene85246 | 0.812772 | 3.58E-51 | -1.69E-46 |
| MS.gene055808 | MS.gene85246 | 0.80005 | 1.73E-48 | -1.69E-46 |
| MS.gene055841 | MS.gene85246 | 0.837127 | 6.24E-57 | -1.69E-46 |
| MS.gene056045 | MS.gene85246 | 0.815618 | 8.43E-52 | -1.69E-46 |
| MS.gene056091 | MS.gene85246 | 0.805307 | 1.42E-49 | -1.69E-46 |
| MS.gene056181 | MS.gene85246 | 0.846398 | 2.23E-59 | -1.69E-46 |
| MS.gene056215 | MS.gene85246 | 0.847256 | 1.30E-59 | -1.69E-46 |
| MS.gene056403 | MS.gene85246 | 0.845856 | 3.13E-59 | -1.69E-46 |
| MS.gene056509 | MS.gene85246 | 0.833218 | 6.05E-56 | -1.69E-46 |
| MS.gene056605 | MS.gene85246 | 0.838384 | 2.97E-57 | -1.69E-46 |
| MS.gene056631 | MS.gene85246 | 0.839714 | 1.34E-57 | -1.69E-46 |
| MS.gene056699 | MS.gene85246 | 0.840172 | 1.02E-57 | -1.69E-46 |
| MS.gene056787 | MS.gene85246 | 0.837283 | 5.69E-57 | -1.69E-46 |
| MS.gene05689 | MS.gene85246 | 0.854865 | 9.26E-62 | -1.69E-46 |
| MS.gene056901 | MS.gene85246 | 0.803464 | 3.44E-49 | -1.69E-46 |
| MS.gene056986 | MS.gene85246 | 0.960856 | 4.94E-119 | -1.69E-46 |
| MS.gene057034 | MS.gene85246 | 0.826352 | 2.84E-54 | -1.69E-46 |
| MS.gene057094 | MS.gene85246 | 0.809161 | 2.17E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene85246 | 0.841088 | 5.87E-58 | -1.69E-46 |
| MS.gene057208 | MS.gene85246 | 0.832461 | 9.33E-56 | -1.69E-46 |
| MS.gene057320 | MS.gene85246 | 0.815056 | 1.12E-51 | -1.69E-46 |
| MS.gene057360 | MS.gene85246 | 0.807559 | 4.77E-50 | -1.69E-46 |
| MS.gene057693 | MS.gene85246 | 0.819344 | 1.22E-52 | -1.69E-46 |
| MS.gene057705 | MS.gene85246 | 0.82239 | 2.43E-53 | -1.69E-46 |
| MS.gene05781 | MS.gene85246 | 0.831303 | 1.80E-55 | -1.69E-46 |
| MS.gene057890 | MS.gene85246 | -0.811039 | 8.55E-51 | -1.69E-46 |
| MS.gene057999 | MS.gene85246 | 0.83645 | 9.29E-57 | -1.69E-46 |
| MS.gene058238 | MS.gene85246 | 0.814611 | 1.41E-51 | -1.69E-46 |
| MS.gene058292 | MS.gene85246 | 0.809738 | 1.63E-50 | -1.69E-46 |
| MS.gene059146 | MS.gene85246 | 0.892324 | 1.76E-74 | -1.69E-46 |
| MS.gene059227 | MS.gene85246 | 0.816427 | 5.56E-52 | -1.69E-46 |
| MS.gene059360 | MS.gene85246 | 0.821801 | 3.33E-53 | -1.69E-46 |
| MS.gene05978 | MS.gene85246 | 0.805895 | 1.07E-49 | -1.69E-46 |
| MS.gene059830 | MS.gene85246 | 0.837781 | 4.24E-57 | -1.69E-46 |
| MS.gene05985 | MS.gene85246 | -0.856049 | 4.18E-62 | -1.69E-46 |
| MS.gene059901 | MS.gene85246 | -0.821447 | 4.02E-53 | -1.69E-46 |
| MS.gene059935 | MS.gene85246 | 0.803097 | 4.10E-49 | -1.69E-46 |
| MS.gene06001 | MS.gene85246 | 0.809924 | 1.49E-50 | -1.69E-46 |
| MS.gene06010 | MS.gene85246 | 0.81537 | 9.57E-52 | -1.69E-46 |
| MS.gene06011 | MS.gene85246 | 0.870733 | 1.17E-66 | -1.69E-46 |
| MS.gene060365 | MS.gene85246 | 0.846979 | 1.55E-59 | -1.69E-46 |
| MS.gene060429 | MS.gene85246 | 0.845364 | 4.25E-59 | -1.69E-46 |
| MS.gene060586 | MS.gene85246 | 0.808546 | 2.94E-50 | -1.69E-46 |
| MS.gene060763 | MS.gene85246 | 0.830115 | 3.52E-55 | -1.69E-46 |
| MS.gene060830 | MS.gene85246 | 0.828205 | 1.02E-54 | -1.69E-46 |
| MS.gene060933 | MS.gene85246 | 0.838783 | 2.34E-57 | -1.69E-46 |
| MS.gene060935 | MS.gene85246 | 0.859367 | 4.35E-63 | -1.69E-46 |
| MS.gene060937 | MS.gene85246 | 0.858077 | 1.06E-62 | -1.69E-46 |
| MS.gene061100 | MS.gene85246 | 0.804211 | 2.41E-49 | -1.69E-46 |
| MS.gene061188 | MS.gene85246 | 0.81708 | 3.97E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85246.t1 | MTR_2g099500 | 99.600 | 250 | 1 | 0 | 1 | 250 | 1 | 250 | 0.0 | 514 |
| MS.gene85246.t1 | MTR_8g019520 | 80.081 | 246 | 48 | 1 | 6 | 250 | 10 | 255 | 1.42e-123 | 352 |
| MS.gene85246.t1 | MTR_8g019520 | 79.757 | 247 | 48 | 2 | 6 | 250 | 10 | 256 | 5.34e-122 | 348 |
| MS.gene85246.t1 | MTR_2g040990 | 72.177 | 248 | 58 | 5 | 6 | 250 | 13 | 252 | 1.43e-113 | 326 |
| MS.gene85246.t1 | MTR_4g134510 | 67.857 | 252 | 76 | 1 | 1 | 247 | 1 | 252 | 1.74e-111 | 321 |
| MS.gene85246.t1 | MTR_1g015185 | 68.775 | 253 | 70 | 3 | 6 | 250 | 11 | 262 | 2.56e-108 | 313 |
| MS.gene85246.t1 | MTR_4g015830 | 62.000 | 250 | 82 | 6 | 1 | 250 | 3 | 239 | 4.15e-92 | 271 |
| MS.gene85246.t1 | MTR_7g068590 | 58.607 | 244 | 91 | 4 | 1 | 244 | 3 | 236 | 2.92e-86 | 256 |
| MS.gene85246.t1 | MTR_1g015185 | 79.286 | 140 | 29 | 0 | 6 | 145 | 11 | 150 | 1.13e-70 | 216 |
| MS.gene85246.t1 | MTR_8g066480 | 51.471 | 136 | 46 | 5 | 116 | 250 | 29 | 145 | 2.23e-26 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85246.t1 | AT3G42790 | 72.653 | 245 | 61 | 3 | 6 | 250 | 11 | 249 | 2.36e-118 | 338 |
| MS.gene85246.t1 | AT5G20510 | 69.200 | 250 | 71 | 2 | 6 | 250 | 11 | 259 | 1.32e-113 | 327 |
| MS.gene85246.t1 | AT1G14510 | 67.755 | 245 | 76 | 3 | 6 | 250 | 10 | 251 | 6.90e-106 | 306 |
| MS.gene85246.t1 | AT2G02470 | 68.340 | 259 | 69 | 6 | 1 | 250 | 1 | 255 | 6.53e-105 | 304 |
| MS.gene85246.t1 | AT2G02470 | 68.504 | 254 | 68 | 6 | 1 | 250 | 1 | 246 | 4.64e-103 | 299 |
| MS.gene85246.t1 | AT5G26210 | 70.732 | 246 | 70 | 2 | 6 | 250 | 10 | 254 | 1.91e-93 | 275 |
| MS.gene85246.t1 | AT5G20510 | 68.519 | 216 | 62 | 2 | 40 | 250 | 4 | 218 | 5.08e-92 | 270 |
| MS.gene85246.t1 | AT5G05610 | 60.331 | 242 | 84 | 5 | 6 | 247 | 9 | 238 | 3.48e-88 | 261 |
| MS.gene85246.t1 | AT5G05610 | 60.331 | 242 | 84 | 5 | 6 | 247 | 9 | 238 | 3.48e-88 | 261 |
| MS.gene85246.t1 | AT3G11200 | 61.570 | 242 | 84 | 5 | 6 | 247 | 11 | 243 | 9.41e-86 | 255 |
| MS.gene85246.t1 | AT5G20510 | 74.194 | 155 | 40 | 0 | 6 | 160 | 11 | 165 | 9.82e-76 | 228 |
| MS.gene85246.t1 | AT3G11200 | 61.538 | 208 | 71 | 5 | 40 | 247 | 32 | 230 | 4.66e-72 | 220 |
| MS.gene85246.t1 | AT2G02470 | 72.785 | 158 | 38 | 2 | 1 | 154 | 1 | 157 | 1.00e-66 | 207 |
Find 59 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTCTTCCTCCTCATCTTT+TGG | 0.240666 | 2.4:+4733089 | None:intergenic |
| GGTTGTCTGCTCTGAGCTTC+AGG | 0.243347 | 2.4:+4733128 | None:intergenic |
| TTCTACTTTGGAGCCAGATT+TGG | 0.290182 | 2.4:-4735205 | MS.gene85246:CDS |
| ACGGATTGCTTAATGAGAAT+TGG | 0.301755 | 2.4:-4735372 | MS.gene85246:CDS |
| AAGGAGAATTTGTGCTTATA+CGG | 0.310260 | 2.4:-4735391 | MS.gene85246:CDS |
| AACAGGGCGAAGCCACTTGC+GGG | 0.339120 | 2.4:-4733046 | MS.gene85246:CDS |
| TTTGGCTGTAATGCCGCTTT+TGG | 0.349429 | 2.4:+4733107 | None:intergenic |
| GTAACGGGGCTGATGAGTTC+TGG | 0.350703 | 2.4:-4733010 | MS.gene85246:CDS |
| TGCTGGGTATCAACTTTGCC+AGG | 0.351612 | 2.4:-4735300 | MS.gene85246:CDS |
| CTTTGATGATTCCAGTTCTT+CGG | 0.353581 | 2.4:+4736204 | None:intergenic |
| AAGAAATTATACCGACGGTT+AGG | 0.356361 | 2.4:+4736180 | None:intergenic |
| ATTATTTACCGCTTTAGAAC+TGG | 0.360765 | 2.4:+4734379 | None:intergenic |
| GGGCTTGTGGTGATAGTAAC+GGG | 0.362851 | 2.4:-4733025 | MS.gene85246:CDS |
| AGAGATTCCTGAGCCTGTGC+TGG | 0.371017 | 2.4:-4735317 | MS.gene85246:CDS |
| GATTTCAAGAGCCGAAGAAC+TGG | 0.371977 | 2.4:-4736215 | MS.gene85246:CDS |
| ACAGTATTTGAAGTTGTAAC+TGG | 0.378246 | 2.4:-4734467 | MS.gene85246:CDS |
| CTTTCCCTTGCATTCTACTT+TGG | 0.386606 | 2.4:-4735217 | MS.gene85246:CDS |
| CGGATTGCTTAATGAGAATT+GGG | 0.394937 | 2.4:-4735371 | MS.gene85246:CDS |
| TTTCTCTTGCATTCCATCCC+TGG | 0.397443 | 2.4:+4735282 | None:intergenic |
| AGAGCAGGATGATGATGAAC+AGG | 0.397479 | 2.4:-4733063 | MS.gene85246:CDS |
| AGCTTTATCAAATCCAAATC+TGG | 0.410286 | 2.4:+4735192 | None:intergenic |
| AGCACAGGCTCAGGAATCTC+TGG | 0.425752 | 2.4:+4735319 | None:intergenic |
| AAAAGATGAGGAGGAAGAAC+TGG | 0.426868 | 2.4:-4733087 | MS.gene85246:CDS |
| TCTTGTTACTGCTGCATGAT+GGG | 0.433135 | 2.4:+4732898 | None:intergenic |
| TCTGGAGGAACTTCTTCAAC+AGG | 0.445499 | 2.4:+4735337 | None:intergenic |
| AGAAATTATACCGACGGTTA+GGG | 0.452362 | 2.4:+4736181 | None:intergenic |
| GGAGGAAGAACTGGAAGAGC+AGG | 0.470600 | 2.4:-4733078 | MS.gene85246:CDS |
| CTCTTGTTACTGCTGCATGA+TGG | 0.480424 | 2.4:+4732897 | None:intergenic |
| TTCTACAGACAATGTGATCC+TGG | 0.488698 | 2.4:-4735994 | MS.gene85246:intron |
| TTGATACCCAGCACAGGCTC+AGG | 0.497706 | 2.4:+4735310 | None:intergenic |
| ATCACTGTGAACAGCAACTA+AGG | 0.498800 | 2.4:+4735249 | None:intergenic |
| TTGCTGTTCACAGTGATACA+TGG | 0.507689 | 2.4:-4735243 | MS.gene85246:CDS |
| ATCTGCGAGAAGTGGTTCCA+TGG | 0.517485 | 2.4:-4732975 | MS.gene85246:CDS |
| GGTATCAACTTTGCCAGGGA+TGG | 0.520071 | 2.4:-4735295 | MS.gene85246:CDS |
| GAGATTCCTGAGCCTGTGCT+GGG | 0.523852 | 2.4:-4735316 | MS.gene85246:CDS |
| ATGGAATGCAAGAGAAAGAC+TGG | 0.533268 | 2.4:-4735276 | MS.gene85246:CDS |
| GAAGCCACTTGCGGGGCTTG+TGG | 0.543776 | 2.4:-4733038 | MS.gene85246:CDS |
| TTGATATGCTCAGCACGAGC+AGG | 0.552258 | 2.4:+4732933 | None:intergenic |
| GAATCGAATTGAACAATGGA+AGG | 0.552287 | 2.4:-4736269 | None:intergenic |
| TTGGATTTGATAAAGCTGAC+AGG | 0.552742 | 2.4:-4735186 | MS.gene85246:intron |
| GGGGCTTGTGGTGATAGTAA+CGG | 0.558893 | 2.4:-4733026 | MS.gene85246:CDS |
| GTTACAACTTCAAATACTGT+TGG | 0.565683 | 2.4:+4734470 | None:intergenic |
| GCTGCGACATCTGCGAGAAG+TGG | 0.566172 | 2.4:-4732983 | MS.gene85246:CDS |
| GAACAGGGCGAAGCCACTTG+CGG | 0.571946 | 2.4:-4733047 | MS.gene85246:CDS |
| TGGCTCCAAAGTAGAATGCA+AGG | 0.572860 | 2.4:+4735212 | None:intergenic |
| ATCTAAGTCCAGTTCTAAAG+CGG | 0.587642 | 2.4:-4734387 | MS.gene85246:intron |
| ATCACCACAAGCCCCGCAAG+TGG | 0.598002 | 2.4:+4733034 | None:intergenic |
| TCAGAGCAGACAACCAAAAG+CGG | 0.606960 | 2.4:-4733120 | MS.gene85246:CDS |
| GCTGGGTATCAACTTTGCCA+GGG | 0.620748 | 2.4:-4735299 | MS.gene85246:CDS |
| GCAAAGTTGATACCCAGCAC+AGG | 0.629760 | 2.4:+4735304 | None:intergenic |
| ATCATCAAAGCCCTAACCGT+CGG | 0.634254 | 2.4:-4736191 | MS.gene85246:intron |
| GGCATTACAGCCAAAAGATG+AGG | 0.636479 | 2.4:-4733099 | MS.gene85246:CDS |
| GGCTCCAAAGTAGAATGCAA+GGG | 0.639786 | 2.4:+4735213 | None:intergenic |
| ACAGGGCGAAGCCACTTGCG+GGG | 0.643480 | 2.4:-4733045 | MS.gene85246:CDS |
| ACAGGCTCAGGAATCTCTGG+AGG | 0.651339 | 2.4:+4735322 | None:intergenic |
| ATTACAGCCAAAAGATGAGG+AGG | 0.661732 | 2.4:-4733096 | MS.gene85246:CDS |
| GAGCAGGATGATGATGAACA+GGG | 0.682274 | 2.4:-4733062 | MS.gene85246:CDS |
| GGCTTGTGGTGATAGTAACG+GGG | 0.707309 | 2.4:-4733024 | MS.gene85246:CDS |
| TCTTCAGTCTCAAACAACAG+TGG | 0.724521 | 2.4:-4734416 | MS.gene85246:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAGAAAATGATATTATT+AGG | + | chr2.4:4735608-4735627 | None:intergenic | 10.0% |
| !!! | AAATAAATACAACTATTTTA+AGG | + | chr2.4:4733692-4733711 | None:intergenic | 10.0% |
| !!! | AATAAATACAACTATTTTAA+GGG | + | chr2.4:4733691-4733710 | None:intergenic | 10.0% |
| !! | AAATAAATAAGTTAACAATG+TGG | - | chr2.4:4735268-4735287 | MS.gene85246:CDS | 15.0% |
| !! | ATTTGTGAATAAAAAAGTAA+AGG | - | chr2.4:4735141-4735160 | MS.gene85246:intron | 15.0% |
| !! | GTATATAAACATAACTTATT+TGG | + | chr2.4:4735876-4735895 | None:intergenic | 15.0% |
| !! | TAAATAAAATTCAAAAACCT+TGG | + | chr2.4:4733073-4733092 | None:intergenic | 15.0% |
| !!! | AAAATGCCTTAATTTTAAAA+AGG | + | chr2.4:4735090-4735109 | None:intergenic | 15.0% |
| !!! | AAATGCCTTAATTTTAAAAA+GGG | + | chr2.4:4735089-4735108 | None:intergenic | 15.0% |
| !!! | TTCAATCTTTTTCAAAATTT+TGG | - | chr2.4:4732985-4733004 | MS.gene85246:CDS | 15.0% |
| !!! | TTTATTGTCATTTTGAATTT+CGG | - | chr2.4:4735623-4735642 | MS.gene85246:intron | 15.0% |
| !!! | TTTATTTTCCATCAATTTTA+GGG | - | chr2.4:4733241-4733260 | MS.gene85246:intron | 15.0% |
| !!! | TTTTATTTTCCATCAATTTT+AGG | - | chr2.4:4733240-4733259 | MS.gene85246:intron | 15.0% |
| !! | AAGAAAAATCTTATTCAACA+AGG | + | chr2.4:4734129-4734148 | None:intergenic | 20.0% |
| !! | AAGTATACATATCATTAACA+GGG | + | chr2.4:4735710-4735729 | None:intergenic | 20.0% |
| !! | AGAAAAATCTTATTCAACAA+GGG | + | chr2.4:4734128-4734147 | None:intergenic | 20.0% |
| !! | AGATAAAAATAGTTATGCTT+CGG | + | chr2.4:4733991-4734010 | None:intergenic | 20.0% |
| !! | TATCTAATTGATATCTTGTT+TGG | - | chr2.4:4735928-4735947 | MS.gene85246:intron | 20.0% |
| !! | TCTATTGTTTATCCTATAAT+GGG | - | chr2.4:4734981-4735000 | MS.gene85246:intron | 20.0% |
| !! | TGATAATTCATTGTTCTTTA+TGG | - | chr2.4:4733325-4733344 | MS.gene85246:intron | 20.0% |
| !!! | AAATTAAGGCATTTTTCAAA+TGG | - | chr2.4:4735095-4735114 | MS.gene85246:intron | 20.0% |
| !!! | AGAATCCCTTTTTAAAATTA+AGG | - | chr2.4:4735081-4735100 | MS.gene85246:intron | 20.0% |
| !!! | ATCATCAAAAATTTGTTCAA+CGG | + | chr2.4:4732909-4732928 | None:intergenic | 20.0% |
| !!! | ATCTAATTGATATCTTGTTT+GGG | - | chr2.4:4735929-4735948 | MS.gene85246:intron | 20.0% |
| !!! | CGCTATTATTATTTTAAACA+GGG | + | chr2.4:4734901-4734920 | None:intergenic | 20.0% |
| !!! | TCGCTATTATTATTTTAAAC+AGG | + | chr2.4:4734902-4734921 | None:intergenic | 20.0% |
| !!! | TTATTGTCATTTTGAATTTC+GGG | - | chr2.4:4735624-4735643 | MS.gene85246:intron | 20.0% |
| !!! | TTTCATTAAATTTTCTACCA+AGG | - | chr2.4:4733053-4733072 | MS.gene85246:CDS | 20.0% |
| !!! | TTTTCAAAATTTTGGCAAAA+GGG | - | chr2.4:4732993-4733012 | MS.gene85246:CDS | 20.0% |
| !!! | TTTTTCAAAATTTTGGCAAA+AGG | - | chr2.4:4732992-4733011 | MS.gene85246:CDS | 20.0% |
| !!! | TTTTTTTGCAATAAACAACA+AGG | + | chr2.4:4735246-4735265 | None:intergenic | 20.0% |
| ! | AAACATAACTTATTTGGAAG+TGG | + | chr2.4:4735870-4735889 | None:intergenic | 25.0% |
| ! | ACATTGAAATTAAACTAACC+AGG | + | chr2.4:4733168-4733187 | None:intergenic | 25.0% |
| ! | ATTGACTGATAAATAAAAGG+CGG | + | chr2.4:4733393-4733412 | None:intergenic | 25.0% |
| ! | CAAGTATACATATCATTAAC+AGG | + | chr2.4:4735711-4735730 | None:intergenic | 25.0% |
| ! | CAGTTAATTAGATAAGAACA+CGG | + | chr2.4:4735978-4735997 | None:intergenic | 25.0% |
| ! | CTGTTAATGATATGTATACT+TGG | - | chr2.4:4735709-4735728 | MS.gene85246:intron | 25.0% |
| ! | GAATTTGGACTGAATATTTA+TGG | - | chr2.4:4735523-4735542 | MS.gene85246:intron | 25.0% |
| ! | GATAAAAATAGTTATGCTTC+GGG | + | chr2.4:4733990-4734009 | None:intergenic | 25.0% |
| ! | GCAAATAAAATTGCAAATCA+AGG | + | chr2.4:4734202-4734221 | None:intergenic | 25.0% |
| ! | GTCTATTGTTTATCCTATAA+TGG | - | chr2.4:4734980-4734999 | MS.gene85246:intron | 25.0% |
| ! | GTGAAGTATGATGAATATAT+TGG | - | chr2.4:4735459-4735478 | MS.gene85246:intron | 25.0% |
| ! | TAAAGAAAAAACCACTTGAT+AGG | + | chr2.4:4734492-4734511 | None:intergenic | 25.0% |
| ! | TAATGATATGTATACTTGGT+TGG | - | chr2.4:4735713-4735732 | MS.gene85246:intron | 25.0% |
| ! | TAATTGAACCCTAAAATTGA+TGG | + | chr2.4:4733252-4733271 | None:intergenic | 25.0% |
| ! | TATTCTTGCACTAAAATGTT+TGG | - | chr2.4:4733091-4733110 | MS.gene85246:CDS | 25.0% |
| ! | TTGCTTATAAATCATTGTTG+AGG | - | chr2.4:4734218-4734237 | MS.gene85246:intron | 25.0% |
| ! | TTGTCTCCTTCTTTATTAAT+CGG | - | chr2.4:4735326-4735345 | MS.gene85246:CDS | 25.0% |
| !! | AAAGGAACAACTAGTTTAAT+TGG | - | chr2.4:4735159-4735178 | MS.gene85246:intron | 25.0% |
| !! | AATCATCTGTGTATTTGTTT+TGG | - | chr2.4:4734546-4734565 | MS.gene85246:intron | 25.0% |
| !! | ACTAAAGAATCGTTTCATTT+TGG | + | chr2.4:4735200-4735219 | None:intergenic | 25.0% |
| !!! | AATAATTTGCTTATCCAAAC+AGG | - | chr2.4:4733665-4733684 | MS.gene85246:intron | 25.0% |
| !!! | ATAAAAGAGCATTCAAATGT+CGG | + | chr2.4:4733226-4733245 | None:intergenic | 25.0% |
| !!! | ATACCATTTTTTCCTGAAAA+AGG | - | chr2.4:4734287-4734306 | MS.gene85246:intron | 25.0% |
| !!! | CTTTTATTTATCAGTCAATG+CGG | - | chr2.4:4733394-4733413 | MS.gene85246:intron | 25.0% |
| !!! | TAAGCTATTTCTAAGGAAAA+TGG | + | chr2.4:4733591-4733610 | None:intergenic | 25.0% |
| !!! | TACCATTTTTTCCTGAAAAA+GGG | - | chr2.4:4734288-4734307 | MS.gene85246:intron | 25.0% |
| AAGGAGAATTTGTGCTTATA+CGG | - | chr2.4:4733750-4733769 | MS.gene85246:intron | 30.0% | |
| AAGGTATGCAGAAATAAAAG+AGG | - | chr2.4:4735570-4735589 | MS.gene85246:intron | 30.0% | |
| AATTGAAGATTCCTATCAAG+TGG | - | chr2.4:4734478-4734497 | MS.gene85246:CDS | 30.0% | |
| ACTCGTGAAAAAGTTATATC+AGG | - | chr2.4:4734018-4734037 | MS.gene85246:intron | 30.0% | |
| ACTTTCAATGCAAAATTGTG+TGG | - | chr2.4:4735894-4735913 | MS.gene85246:intron | 30.0% | |
| AGGGTTCAATTATTTGCAAT+TGG | - | chr2.4:4733260-4733279 | MS.gene85246:intron | 30.0% | |
| AGTTTCCACTAACTATGATA+TGG | - | chr2.4:4735793-4735812 | MS.gene85246:intron | 30.0% | |
| ATATCAGGATGAGTATGTTA+AGG | - | chr2.4:4734033-4734052 | MS.gene85246:intron | 30.0% | |
| CAAAATTTGTAGATCAAGCA+AGG | + | chr2.4:4733029-4733048 | None:intergenic | 30.0% | |
| CAATACATGAAAGATAACCA+TGG | + | chr2.4:4734961-4734980 | None:intergenic | 30.0% | |
| CTGTTGTATTCTTTCAGAAA+AGG | - | chr2.4:4733731-4733750 | MS.gene85246:intron | 30.0% | |
| GTTACAACTTCAAATACTGT+TGG | + | chr2.4:4734674-4734693 | None:intergenic | 30.0% | |
| TAAGAACTTTACCTTAAGCT+TGG | - | chr2.4:4735392-4735411 | MS.gene85246:CDS | 30.0% | |
| TAGACTCCGATTAATAAAGA+AGG | + | chr2.4:4735335-4735354 | None:intergenic | 30.0% | |
| TATACATATCATTAACAGGG+TGG | + | chr2.4:4735707-4735726 | None:intergenic | 30.0% | |
| TATCTCTCATCATTATTACG+CGG | + | chr2.4:4735821-4735840 | None:intergenic | 30.0% | |
| TATGTATACTTGGTTGGAAA+TGG | - | chr2.4:4735719-4735738 | MS.gene85246:intron | 30.0% | |
| TGAACAAGAAATTATACCGA+CGG | + | chr2.4:4732969-4732988 | None:intergenic | 30.0% | |
| TTCAAGTGTAGACTGTATAT+AGG | - | chr2.4:4735057-4735076 | MS.gene85246:intron | 30.0% | |
| TTGTCGCATTTCTATGATTT+AGG | - | chr2.4:4733439-4733458 | MS.gene85246:intron | 30.0% | |
| ! | AATCGGAGTCTAAAATACTT+TGG | - | chr2.4:4735343-4735362 | MS.gene85246:CDS | 30.0% |
| ! | ACAGTATTTGAAGTTGTAAC+TGG | - | chr2.4:4734674-4734693 | MS.gene85246:intron | 30.0% |
| ! | AGCTTTATCAAATCCAAATC+TGG | + | chr2.4:4733952-4733971 | None:intergenic | 30.0% |
| ! | CTTGCTTGATCTACAAATTT+TGG | - | chr2.4:4733027-4733046 | MS.gene85246:CDS | 30.0% |
| ! | TGCGACAAATTTTGCATTAT+AGG | + | chr2.4:4733427-4733446 | None:intergenic | 30.0% |
| ! | TGTACTTGTATGATGGAATT+TGG | - | chr2.4:4735508-4735527 | MS.gene85246:intron | 30.0% |
| ! | TTAATTGGTTTCTTTGAGCA+AGG | - | chr2.4:4735174-4735193 | MS.gene85246:intron | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | - | chr2.4:4733500-4733519 | MS.gene85246:intron | 30.0% |
| !! | ATTATTTACCGCTTTAGAAC+TGG | + | chr2.4:4734765-4734784 | None:intergenic | 30.0% |
| !! | CGCATTGACTGATAAATAAA+AGG | + | chr2.4:4733396-4733415 | None:intergenic | 30.0% |
| !! | GCTTACATAAGCTATTTCTA+AGG | + | chr2.4:4733598-4733617 | None:intergenic | 30.0% |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | - | chr2.4:4733501-4733520 | MS.gene85246:intron | 30.0% |
| !! | TTGGTGTTTCGTTACATTTT+GGG | - | chr2.4:4735362-4735381 | MS.gene85246:CDS | 30.0% |
| !!! | ACCATTTTTTCCTGAAAAAG+GGG | - | chr2.4:4734289-4734308 | MS.gene85246:intron | 30.0% |
| !!! | TGTTTTAAGATAGTGCAAGA+AGG | - | chr2.4:4734423-4734442 | MS.gene85246:CDS | 30.0% |
| !!! | TTTGGTGTTTCGTTACATTT+TGG | - | chr2.4:4735361-4735380 | MS.gene85246:CDS | 30.0% |
| AAGAAATTATACCGACGGTT+AGG | + | chr2.4:4732964-4732983 | None:intergenic | 35.0% | |
| AATGGCAAATTAGGACAAGA+AGG | + | chr2.4:4734610-4734629 | None:intergenic | 35.0% | |
| AGAAATTATACCGACGGTTA+GGG | + | chr2.4:4732963-4732982 | None:intergenic | 35.0% | |
| AGTATGTTAAGGCAGTAGTT+TGG | - | chr2.4:4734044-4734063 | MS.gene85246:intron | 35.0% | |
| AGTTAGTGGAAACTTGTGAA+GGG | + | chr2.4:4735787-4735806 | None:intergenic | 35.0% | |
| ATAGTGCAAGAAGGAAAAGT+TGG | - | chr2.4:4734432-4734451 | MS.gene85246:CDS | 35.0% | |
| CATGGACAAAAGACAATACA+TGG | + | chr2.4:4734943-4734962 | None:intergenic | 35.0% | |
| CGGATTGCTTAATGAGAATT+GGG | - | chr2.4:4733770-4733789 | MS.gene85246:intron | 35.0% | |
| GCTAGAAAGCAGTTATAAAG+TGG | + | chr2.4:4734174-4734193 | None:intergenic | 35.0% | |
| GCTTATTTGAGCTTATCTAC+TGG | - | chr2.4:4733476-4733495 | MS.gene85246:intron | 35.0% | |
| TAGTTAGTGGAAACTTGTGA+AGG | + | chr2.4:4735788-4735807 | None:intergenic | 35.0% | |
| TCAAATAAGCCAATCCAAAC+AGG | + | chr2.4:4733466-4733485 | None:intergenic | 35.0% | |
| TCAATGCAAAATTGTGTGGA+AGG | - | chr2.4:4735898-4735917 | MS.gene85246:intron | 35.0% | |
| TGAATCGCAGTGTAAAACTT+AGG | - | chr2.4:4734840-4734859 | MS.gene85246:intron | 35.0% | |
| TGCAATAAACAACAAGGTCT+TGG | + | chr2.4:4735240-4735259 | None:intergenic | 35.0% | |
| TGCATCACAAATGGCAAATT+AGG | + | chr2.4:4734619-4734638 | None:intergenic | 35.0% | |
| TGTTCTCATCTATCTGTCTA+TGG | - | chr2.4:4735031-4735050 | MS.gene85246:intron | 35.0% | |
| TTCAAGTGTAGACTGTTCAT+AGG | - | chr2.4:4734869-4734888 | MS.gene85246:intron | 35.0% | |
| TTGCAGAATAACCAAGCTTA+AGG | + | chr2.4:4735406-4735425 | None:intergenic | 35.0% | |
| TTGGATTTGATAAAGCTGAC+AGG | - | chr2.4:4733955-4733974 | MS.gene85246:intron | 35.0% | |
| TTGTTTAGTCATCGTTGTGT+TGG | - | chr2.4:4734090-4734109 | MS.gene85246:intron | 35.0% | |
| ! | ACGGATTGCTTAATGAGAAT+TGG | - | chr2.4:4733769-4733788 | MS.gene85246:intron | 35.0% |
| ! | CAAGCTTTGTACTTGTATGA+TGG | - | chr2.4:4735501-4735520 | MS.gene85246:intron | 35.0% |
| ! | CACTTGAATTGCTACTTGTA+AGG | - | chr2.4:4735551-4735570 | MS.gene85246:intron | 35.0% |
| ! | CATGTATTGTCTTTTGTCCA+TGG | - | chr2.4:4734941-4734960 | MS.gene85246:intron | 35.0% |
| ! | CTTTGATGATTCCAGTTCTT+CGG | + | chr2.4:4732940-4732959 | None:intergenic | 35.0% |
| ! | TAATTTGCCATTTGTGATGC+AGG | - | chr2.4:4734618-4734637 | MS.gene85246:intron | 35.0% |
| ! | TCTATGATTTAGGACCTGTT+TGG | - | chr2.4:4733449-4733468 | MS.gene85246:intron | 35.0% |
| ! | TGATCTTCACACATTTTCCA+TGG | + | chr2.4:4736186-4736205 | None:intergenic | 35.0% |
| ! | TGGTGTTTCGTTACATTTTG+GGG | - | chr2.4:4735363-4735382 | MS.gene85246:CDS | 35.0% |
| !! | AACTATTTTAAGGGCCTGTT+TGG | + | chr2.4:4733682-4733701 | None:intergenic | 35.0% |
| !! | ATCTAAGTCCAGTTCTAAAG+CGG | - | chr2.4:4734754-4734773 | MS.gene85246:intron | 35.0% |
| !! | CTTGTAGCTTTGAATTCTGA+TGG | - | chr2.4:4733353-4733372 | MS.gene85246:intron | 35.0% |
| !! | TGAATTTCGGGTTTAGAATG+TGG | - | chr2.4:4735636-4735655 | MS.gene85246:intron | 35.0% |
| !!! | TCCCCTTTTTCAGGAAAAAA+TGG | + | chr2.4:4734293-4734312 | None:intergenic | 35.0% |
| AAAAGATGAGGAGGAAGAAC+TGG | - | chr2.4:4736054-4736073 | MS.gene85246:intron | 40.0% | |
| AAACAACAAGGTCTTGGATG+AGG | + | chr2.4:4735234-4735253 | None:intergenic | 40.0% | |
| AGCCACAATTGATGCTCTTT+CGG | - | chr2.4:4734514-4734533 | MS.gene85246:intron | 40.0% | |
| ATCACTGTGAACAGCAACTA+AGG | + | chr2.4:4733895-4733914 | None:intergenic | 40.0% | |
| ATGGAATGCAAGAGAAAGAC+TGG | - | chr2.4:4733865-4733884 | MS.gene85246:intron | 40.0% | |
| ATTACAGCCAAAAGATGAGG+AGG | - | chr2.4:4736045-4736064 | MS.gene85246:intron | 40.0% | |
| CAATACATGGAGAGTTTGTC+AGG | + | chr2.4:4734930-4734949 | None:intergenic | 40.0% | |
| CACAGACTAAACAATCTGCA+TGG | + | chr2.4:4735013-4735032 | None:intergenic | 40.0% | |
| CTTTCCCTTGCATTCTACTT+TGG | - | chr2.4:4733924-4733943 | MS.gene85246:intron | 40.0% | |
| TCTTCAGTCTCAAACAACAG+TGG | - | chr2.4:4734725-4734744 | MS.gene85246:intron | 40.0% | |
| TCTTGTTACTGCTGCATGAT+GGG | + | chr2.4:4736246-4736265 | None:intergenic | 40.0% | |
| TGATGTGACTAAGAGGTCAT+AGG | + | chr2.4:4734358-4734377 | None:intergenic | 40.0% | |
| TTCTACAGACAATGTGATCC+TGG | - | chr2.4:4733147-4733166 | MS.gene85246:intron | 40.0% | |
| ! | AGTTCTTCCTCCTCATCTTT+TGG | + | chr2.4:4736055-4736074 | None:intergenic | 40.0% |
| ! | GATTTAGGACCTGTTTGGAT+TGG | - | chr2.4:4733454-4733473 | MS.gene85246:intron | 40.0% |
| ! | GCACAAGTTTTCAACATGAG+AGG | - | chr2.4:4735842-4735861 | MS.gene85246:intron | 40.0% |
| ! | TTGCTGTTCACAGTGATACA+TGG | - | chr2.4:4733898-4733917 | MS.gene85246:intron | 40.0% |
| !! | GTAGCTTTGAATTCTGATGG+AGG | - | chr2.4:4733356-4733375 | MS.gene85246:intron | 40.0% |
| !! | TTCTACTTTGGAGCCAGATT+TGG | - | chr2.4:4733936-4733955 | MS.gene85246:intron | 40.0% |
| ATCATCAAAGCCCTAACCGT+CGG | - | chr2.4:4732950-4732969 | MS.gene85246:CDS | 45.0% | |
| CATGGCAGCATTTCTATAGC+AGG | - | chr2.4:4734380-4734399 | MS.gene85246:intron | 45.0% | |
| CCATGTGTGATGTGACTAAG+AGG | + | chr2.4:4734365-4734384 | None:intergenic | 45.0% | |
| CCTCTTAGTCACATCACACA+TGG | - | chr2.4:4734362-4734381 | MS.gene85246:intron | 45.0% | |
| CCTCTTGCAGATGCAAAGTA+AGG | + | chr2.4:4734317-4734336 | None:intergenic | 45.0% | |
| CCTTACTTTGCATCTGCAAG+AGG | - | chr2.4:4734314-4734333 | MS.gene85246:intron | 45.0% | |
| CTCTTGTTACTGCTGCATGA+TGG | + | chr2.4:4736247-4736266 | None:intergenic | 45.0% | |
| GAAGGAGACAAGCTGTAAAC+TGG | + | chr2.4:4735317-4735336 | None:intergenic | 45.0% | |
| GACGTTTCCTGCATCACAAA+TGG | + | chr2.4:4734628-4734647 | None:intergenic | 45.0% | |
| GATTTCAAGAGCCGAAGAAC+TGG | - | chr2.4:4732926-4732945 | MS.gene85246:CDS | 45.0% | |
| GGCATTACAGCCAAAAGATG+AGG | - | chr2.4:4736042-4736061 | MS.gene85246:intron | 45.0% | |
| GGCTCCAAAGTAGAATGCAA+GGG | + | chr2.4:4733931-4733950 | None:intergenic | 45.0% | |
| GTTGAGGCAGTATTCCAACA+CGG | - | chr2.4:4734234-4734253 | MS.gene85246:intron | 45.0% | |
| TCAGAGCAGACAACCAAAAG+CGG | - | chr2.4:4736021-4736040 | MS.gene85246:intron | 45.0% | |
| TCTGGAGGAACTTCTTCAAC+AGG | + | chr2.4:4733807-4733826 | None:intergenic | 45.0% | |
| TGGAAACTTGTGAAGGGAGA+TGG | + | chr2.4:4735781-4735800 | None:intergenic | 45.0% | |
| TGGCTCCAAAGTAGAATGCA+AGG | + | chr2.4:4733932-4733951 | None:intergenic | 45.0% | |
| TTTCTCTTGCATTCCATCCC+TGG | + | chr2.4:4733862-4733881 | None:intergenic | 45.0% | |
| ! | AAGTAAGGCTCCCCTTTTTC+AGG | + | chr2.4:4734302-4734321 | None:intergenic | 45.0% |
| ! | AGAGCAGGATGATGATGAAC+AGG | - | chr2.4:4736078-4736097 | MS.gene85246:intron | 45.0% |
| ! | GAGCAGGATGATGATGAACA+GGG | - | chr2.4:4736079-4736098 | MS.gene85246:intron | 45.0% |
| !! | CGGTGCCATATCATAGTTAG+TGG | + | chr2.4:4735801-4735820 | None:intergenic | 45.0% |
| !! | GACCGAAAGAGCATCAATTG+TGG | + | chr2.4:4734519-4734538 | None:intergenic | 45.0% |
| !! | GCATGGAGAGTACCCATTAT+AGG | + | chr2.4:4734996-4735015 | None:intergenic | 45.0% |
| !!! | TTTGGCTGTAATGCCGCTTT+TGG | + | chr2.4:4736037-4736056 | None:intergenic | 45.0% |
| ATCTGCGAGAAGTGGTTCCA+TGG | - | chr2.4:4736166-4736185 | MS.gene85246:intron | 50.0% | |
| GCAGTATTCCAACACGGAGA+CGG | - | chr2.4:4734240-4734259 | MS.gene85246:intron | 50.0% | |
| GCTGGGTATCAACTTTGCCA+GGG | - | chr2.4:4733842-4733861 | MS.gene85246:intron | 50.0% | |
| GGCTTGTGGTGATAGTAACG+GGG | - | chr2.4:4736117-4736136 | MS.gene85246:intron | 50.0% | |
| GGGCTTGTGGTGATAGTAAC+GGG | - | chr2.4:4736116-4736135 | MS.gene85246:intron | 50.0% | |
| GGGGCTTGTGGTGATAGTAA+CGG | - | chr2.4:4736115-4736134 | MS.gene85246:intron | 50.0% | |
| GGTATCAACTTTGCCAGGGA+TGG | - | chr2.4:4733846-4733865 | MS.gene85246:intron | 50.0% | |
| TGCTGGGTATCAACTTTGCC+AGG | - | chr2.4:4733841-4733860 | MS.gene85246:intron | 50.0% | |
| TTCAACATCCGTCTCCGTGT+TGG | + | chr2.4:4734251-4734270 | None:intergenic | 50.0% | |
| TTGATATGCTCAGCACGAGC+AGG | + | chr2.4:4736211-4736230 | None:intergenic | 50.0% | |
| !! | GCAAAGTTGATACCCAGCAC+AGG | + | chr2.4:4733840-4733859 | None:intergenic | 50.0% |
| ACAGGCTCAGGAATCTCTGG+AGG | + | chr2.4:4733822-4733841 | None:intergenic | 55.0% | |
| AGAGATTCCTGAGCCTGTGC+TGG | - | chr2.4:4733824-4733843 | MS.gene85246:intron | 55.0% | |
| AGCACAGGCTCAGGAATCTC+TGG | + | chr2.4:4733825-4733844 | None:intergenic | 55.0% | |
| GAGATTCCTGAGCCTGTGCT+GGG | - | chr2.4:4733825-4733844 | MS.gene85246:intron | 55.0% | |
| GAGGTCATAGGCTCAAGTCG+TGG | + | chr2.4:4734346-4734365 | None:intergenic | 55.0% | |
| GGAGGAAGAACTGGAAGAGC+AGG | - | chr2.4:4736063-4736082 | MS.gene85246:intron | 55.0% | |
| TTGATACCCAGCACAGGCTC+AGG | + | chr2.4:4733834-4733853 | None:intergenic | 55.0% | |
| ! | GGTTGTCTGCTCTGAGCTTC+AGG | + | chr2.4:4736016-4736035 | None:intergenic | 55.0% |
| ! | GTAACGGGGCTGATGAGTTC+TGG | - | chr2.4:4736131-4736150 | MS.gene85246:intron | 55.0% |
| AACAGGGCGAAGCCACTTGC+GGG | - | chr2.4:4736095-4736114 | MS.gene85246:intron | 60.0% | |
| ATCACCACAAGCCCCGCAAG+TGG | + | chr2.4:4736110-4736129 | None:intergenic | 60.0% | |
| GAACAGGGCGAAGCCACTTG+CGG | - | chr2.4:4736094-4736113 | MS.gene85246:intron | 60.0% | |
| GCTGCGACATCTGCGAGAAG+TGG | - | chr2.4:4736158-4736177 | MS.gene85246:intron | 60.0% | |
| ACAGGGCGAAGCCACTTGCG+GGG | - | chr2.4:4736096-4736115 | MS.gene85246:intron | 65.0% | |
| GAAGCCACTTGCGGGGCTTG+TGG | - | chr2.4:4736103-4736122 | MS.gene85246:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 4732887 | 4736276 | 4732887 | ID=MS.gene85246 |
| chr2.4 | mRNA | 4732887 | 4736276 | 4732887 | ID=MS.gene85246.t1;Parent=MS.gene85246 |
| chr2.4 | exon | 4736192 | 4736276 | 4736192 | ID=MS.gene85246.t1.exon1;Parent=MS.gene85246.t1 |
| chr2.4 | CDS | 4736192 | 4736276 | 4736192 | ID=cds.MS.gene85246.t1;Parent=MS.gene85246.t1 |
| chr2.4 | exon | 4735995 | 4736027 | 4735995 | ID=MS.gene85246.t1.exon2;Parent=MS.gene85246.t1 |
| chr2.4 | CDS | 4735995 | 4736027 | 4735995 | ID=cds.MS.gene85246.t1;Parent=MS.gene85246.t1 |
| chr2.4 | exon | 4735187 | 4735415 | 4735187 | ID=MS.gene85246.t1.exon3;Parent=MS.gene85246.t1 |
| chr2.4 | CDS | 4735187 | 4735415 | 4735187 | ID=cds.MS.gene85246.t1;Parent=MS.gene85246.t1 |
| chr2.4 | exon | 4734388 | 4734523 | 4734388 | ID=MS.gene85246.t1.exon4;Parent=MS.gene85246.t1 |
| chr2.4 | CDS | 4734388 | 4734523 | 4734388 | ID=cds.MS.gene85246.t1;Parent=MS.gene85246.t1 |
| chr2.4 | exon | 4732887 | 4733156 | 4732887 | ID=MS.gene85246.t1.exon5;Parent=MS.gene85246.t1 |
| chr2.4 | CDS | 4732887 | 4733156 | 4732887 | ID=cds.MS.gene85246.t1;Parent=MS.gene85246.t1 |
| Gene Sequence |
| Protein sequence |
