Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27414.t1 | RHN52384.1 | 90.9 | 471 | 43 | 0 | 1 | 471 | 1 | 471 | 3.30E-199 | 704.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27414.t1 | F4IPE3 | 83.6 | 189 | 26 | 3 | 35 | 218 | 50 | 238 | 2.4e-89 | 330.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27414.t1 | A0A396HKI0 | 90.9 | 471 | 43 | 0 | 1 | 471 | 1 | 471 | 2.4e-199 | 704.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene27414.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene27414 | 0.840696 | 7.44E-58 | -1.69E-46 |
| MS.gene049159 | MS.gene27414 | 0.802041 | 6.77E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene27414 | 0.806014 | 1.01E-49 | -1.69E-46 |
| MS.gene049350 | MS.gene27414 | 0.807003 | 6.25E-50 | -1.69E-46 |
| MS.gene049435 | MS.gene27414 | 0.806727 | 7.15E-50 | -1.69E-46 |
| MS.gene049647 | MS.gene27414 | 0.829403 | 5.25E-55 | -1.69E-46 |
| MS.gene049756 | MS.gene27414 | 0.813772 | 2.16E-51 | -1.69E-46 |
| MS.gene049821 | MS.gene27414 | 0.806869 | 6.67E-50 | -1.69E-46 |
| MS.gene049850 | MS.gene27414 | 0.808486 | 3.02E-50 | -1.69E-46 |
| MS.gene050020 | MS.gene27414 | 0.832629 | 8.48E-56 | -1.69E-46 |
| MS.gene050137 | MS.gene27414 | 0.83693 | 7.01E-57 | -1.69E-46 |
| MS.gene050156 | MS.gene27414 | 0.813179 | 2.92E-51 | -1.69E-46 |
| MS.gene050226 | MS.gene27414 | 0.801735 | 7.82E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene27414 | 0.805277 | 1.44E-49 | -1.69E-46 |
| MS.gene050228 | MS.gene27414 | 0.800468 | 1.42E-48 | -1.69E-46 |
| MS.gene050442 | MS.gene27414 | 0.826923 | 2.08E-54 | -1.69E-46 |
| MS.gene050762 | MS.gene27414 | 0.813983 | 1.94E-51 | -1.69E-46 |
| MS.gene050763 | MS.gene27414 | 0.814825 | 1.26E-51 | -1.69E-46 |
| MS.gene050780 | MS.gene27414 | 0.806383 | 8.45E-50 | -1.69E-46 |
| MS.gene050807 | MS.gene27414 | 0.850118 | 2.09E-60 | -1.69E-46 |
| MS.gene050808 | MS.gene27414 | 0.818404 | 2.00E-52 | -1.69E-46 |
| MS.gene050815 | MS.gene27414 | 0.827949 | 1.18E-54 | -1.69E-46 |
| MS.gene050844 | MS.gene27414 | 0.815724 | 7.98E-52 | -1.69E-46 |
| MS.gene051180 | MS.gene27414 | 0.837073 | 6.44E-57 | -1.69E-46 |
| MS.gene051210 | MS.gene27414 | 0.807831 | 4.17E-50 | -1.69E-46 |
| MS.gene051247 | MS.gene27414 | 0.821715 | 3.48E-53 | -1.69E-46 |
| MS.gene051265 | MS.gene27414 | 0.800129 | 1.67E-48 | -1.69E-46 |
| MS.gene051719 | MS.gene27414 | 0.814751 | 1.31E-51 | -1.69E-46 |
| MS.gene051720 | MS.gene27414 | 0.806235 | 9.08E-50 | -1.69E-46 |
| MS.gene052012 | MS.gene27414 | 0.808799 | 2.59E-50 | -1.69E-46 |
| MS.gene052323 | MS.gene27414 | 0.81381 | 2.12E-51 | -1.69E-46 |
| MS.gene052582 | MS.gene27414 | 0.800611 | 1.33E-48 | -1.69E-46 |
| MS.gene052584 | MS.gene27414 | 0.808282 | 3.34E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene27414 | 0.814058 | 1.87E-51 | -1.69E-46 |
| MS.gene052673 | MS.gene27414 | -0.827503 | 1.51E-54 | -1.69E-46 |
| MS.gene052773 | MS.gene27414 | 0.816257 | 6.07E-52 | -1.69E-46 |
| MS.gene052860 | MS.gene27414 | 0.803083 | 4.13E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene27414 | 0.836839 | 7.40E-57 | -1.69E-46 |
| MS.gene052896 | MS.gene27414 | 0.820072 | 8.32E-53 | -1.69E-46 |
| MS.gene053008 | MS.gene27414 | 0.813294 | 2.75E-51 | -1.69E-46 |
| MS.gene053054 | MS.gene27414 | -0.804517 | 2.08E-49 | -1.69E-46 |
| MS.gene053074 | MS.gene27414 | 0.823181 | 1.59E-53 | -1.69E-46 |
| MS.gene053166 | MS.gene27414 | 0.821657 | 3.59E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene27414 | 0.821609 | 3.69E-53 | -1.69E-46 |
| MS.gene053563 | MS.gene27414 | 0.83969 | 1.36E-57 | -1.69E-46 |
| MS.gene054139 | MS.gene27414 | 0.813496 | 2.48E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene27414 | 0.818771 | 1.65E-52 | -1.69E-46 |
| MS.gene054379 | MS.gene27414 | 0.823 | 1.75E-53 | -1.69E-46 |
| MS.gene054467 | MS.gene27414 | 0.838611 | 2.59E-57 | -1.69E-46 |
| MS.gene054468 | MS.gene27414 | 0.830922 | 2.24E-55 | -1.69E-46 |
| MS.gene054472 | MS.gene27414 | 0.832406 | 9.63E-56 | -1.69E-46 |
| MS.gene054657 | MS.gene27414 | 0.807342 | 5.30E-50 | -1.69E-46 |
| MS.gene05468 | MS.gene27414 | 0.819181 | 1.33E-52 | -1.69E-46 |
| MS.gene054775 | MS.gene27414 | 0.827388 | 1.61E-54 | -1.69E-46 |
| MS.gene05510 | MS.gene27414 | 0.803897 | 2.80E-49 | -1.69E-46 |
| MS.gene055227 | MS.gene27414 | 0.806234 | 9.08E-50 | -1.69E-46 |
| MS.gene055313 | MS.gene27414 | 0.809328 | 2.00E-50 | -1.69E-46 |
| MS.gene055356 | MS.gene27414 | 0.803559 | 3.29E-49 | -1.69E-46 |
| MS.gene055357 | MS.gene27414 | 0.81286 | 3.43E-51 | -1.69E-46 |
| MS.gene055358 | MS.gene27414 | 0.823666 | 1.22E-53 | -1.69E-46 |
| MS.gene055359 | MS.gene27414 | 0.80386 | 2.85E-49 | -1.69E-46 |
| MS.gene055363 | MS.gene27414 | 0.801791 | 7.62E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene27414 | 0.811192 | 7.92E-51 | -1.69E-46 |
| MS.gene055466 | MS.gene27414 | 0.818804 | 1.62E-52 | -1.69E-46 |
| MS.gene055468 | MS.gene27414 | 0.809853 | 1.54E-50 | -1.69E-46 |
| MS.gene055608 | MS.gene27414 | 0.80603 | 1.00E-49 | -1.69E-46 |
| MS.gene055623 | MS.gene27414 | 0.833669 | 4.67E-56 | -1.69E-46 |
| MS.gene055701 | MS.gene27414 | 0.804095 | 2.55E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene27414 | 0.853474 | 2.33E-61 | -1.69E-46 |
| MS.gene055926 | MS.gene27414 | 0.824561 | 7.55E-54 | -1.69E-46 |
| MS.gene056005 | MS.gene27414 | 0.800937 | 1.14E-48 | -1.69E-46 |
| MS.gene05604 | MS.gene27414 | 0.859175 | 4.96E-63 | -1.69E-46 |
| MS.gene056050 | MS.gene27414 | 0.802248 | 6.14E-49 | -1.69E-46 |
| MS.gene056173 | MS.gene27414 | 0.818582 | 1.82E-52 | -1.69E-46 |
| MS.gene056366 | MS.gene27414 | 0.815657 | 8.26E-52 | -1.69E-46 |
| MS.gene056595 | MS.gene27414 | 0.811234 | 7.75E-51 | -1.69E-46 |
| MS.gene056643 | MS.gene27414 | 0.805257 | 1.46E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene27414 | 0.834578 | 2.76E-56 | -1.69E-46 |
| MS.gene057060 | MS.gene27414 | 0.801265 | 9.77E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene27414 | 0.801428 | 9.04E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene27414 | 0.812408 | 4.30E-51 | -1.69E-46 |
| MS.gene057693 | MS.gene27414 | 0.82226 | 2.61E-53 | -1.69E-46 |
| MS.gene057869 | MS.gene27414 | 0.805247 | 1.46E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene27414 | 0.839177 | 1.85E-57 | -1.69E-46 |
| MS.gene058146 | MS.gene27414 | 0.808585 | 2.88E-50 | -1.69E-46 |
| MS.gene058168 | MS.gene27414 | 0.824519 | 7.73E-54 | -1.69E-46 |
| MS.gene05847 | MS.gene27414 | 0.816209 | 6.22E-52 | -1.69E-46 |
| MS.gene058548 | MS.gene27414 | 0.804908 | 1.72E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene27414 | 0.809707 | 1.66E-50 | -1.69E-46 |
| MS.gene058636 | MS.gene27414 | 0.809173 | 2.16E-50 | -1.69E-46 |
| MS.gene058829 | MS.gene27414 | 0.807634 | 4.59E-50 | -1.69E-46 |
| MS.gene058979 | MS.gene27414 | 0.8033 | 3.72E-49 | -1.69E-46 |
| MS.gene059006 | MS.gene27414 | 0.819776 | 9.72E-53 | -1.69E-46 |
| MS.gene059161 | MS.gene27414 | 0.801881 | 7.30E-49 | -1.69E-46 |
| MS.gene059331 | MS.gene27414 | 0.802418 | 5.66E-49 | -1.69E-46 |
| MS.gene059335 | MS.gene27414 | 0.802375 | 5.78E-49 | -1.69E-46 |
| MS.gene059439 | MS.gene27414 | 0.817266 | 3.61E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene27414 | 0.800089 | 1.70E-48 | -1.69E-46 |
| MS.gene059725 | MS.gene27414 | 0.834587 | 2.75E-56 | -1.69E-46 |
| MS.gene059937 | MS.gene27414 | 0.80651 | 7.94E-50 | -1.69E-46 |
| MS.gene060137 | MS.gene27414 | -0.820716 | 5.92E-53 | -1.69E-46 |
| MS.gene060322 | MS.gene27414 | 0.832765 | 7.84E-56 | -1.69E-46 |
| MS.gene06052 | MS.gene27414 | 0.803176 | 3.95E-49 | -1.69E-46 |
| MS.gene060572 | MS.gene27414 | 0.817403 | 3.36E-52 | -1.69E-46 |
| MS.gene060634 | MS.gene27414 | -0.811116 | 8.22E-51 | -1.69E-46 |
| MS.gene060637 | MS.gene27414 | 0.804755 | 1.86E-49 | -1.69E-46 |
| MS.gene060683 | MS.gene27414 | 0.813245 | 2.82E-51 | -1.69E-46 |
| MS.gene060685 | MS.gene27414 | 0.813744 | 2.19E-51 | -1.69E-46 |
| MS.gene060781 | MS.gene27414 | 0.804855 | 1.77E-49 | -1.69E-46 |
| MS.gene060802 | MS.gene27414 | 0.800508 | 1.39E-48 | -1.69E-46 |
| MS.gene060803 | MS.gene27414 | 0.832207 | 1.08E-55 | -1.69E-46 |
| MS.gene060998 | MS.gene27414 | 0.833595 | 4.87E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27414.t1 | MTR_8g017210 | 65.385 | 156 | 53 | 1 | 29 | 184 | 62 | 216 | 2.26e-74 | 243 |
| MS.gene27414.t1 | MTR_1g016010 | 61.404 | 171 | 59 | 3 | 21 | 185 | 28 | 197 | 7.41e-73 | 237 |
| MS.gene27414.t1 | MTR_2g099990 | 63.462 | 156 | 56 | 1 | 29 | 184 | 46 | 200 | 1.61e-72 | 236 |
| MS.gene27414.t1 | MTR_1g094115 | 62.179 | 156 | 58 | 1 | 29 | 184 | 47 | 201 | 1.43e-71 | 236 |
| MS.gene27414.t1 | MTR_2g093960 | 62.179 | 156 | 57 | 2 | 29 | 183 | 32 | 186 | 3.80e-70 | 229 |
| MS.gene27414.t1 | MTR_1g112270 | 61.438 | 153 | 58 | 1 | 32 | 184 | 47 | 198 | 7.96e-70 | 232 |
| MS.gene27414.t1 | MTR_4g059870 | 61.783 | 157 | 58 | 2 | 29 | 184 | 38 | 193 | 2.05e-69 | 229 |
| MS.gene27414.t1 | MTR_1g112270 | 62.069 | 145 | 54 | 1 | 40 | 184 | 66 | 209 | 1.11e-66 | 224 |
| MS.gene27414.t1 | MTR_2g090745 | 63.514 | 148 | 53 | 1 | 37 | 184 | 15 | 161 | 8.66e-66 | 218 |
| MS.gene27414.t1 | MTR_2g099990 | 63.636 | 132 | 47 | 1 | 53 | 184 | 1 | 131 | 3.30e-60 | 202 |
| MS.gene27414.t1 | MTR_1g094115 | 54.487 | 156 | 53 | 2 | 29 | 184 | 47 | 184 | 4.89e-57 | 197 |
| MS.gene27414.t1 | MTR_2g017720 | 60.870 | 115 | 39 | 1 | 39 | 153 | 323 | 431 | 2.86e-40 | 150 |
| MS.gene27414.t1 | MTR_3g102000 | 47.015 | 134 | 60 | 4 | 25 | 151 | 2 | 131 | 6.88e-28 | 111 |
| MS.gene27414.t1 | MTR_5g030560 | 64.444 | 45 | 16 | 0 | 39 | 83 | 16 | 60 | 2.87e-16 | 73.9 |
| MS.gene27414.t1 | MTR_4g103250 | 39.241 | 79 | 48 | 0 | 360 | 438 | 62 | 140 | 4.56e-16 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27414.t1 | AT1G68130 | 48.238 | 454 | 140 | 10 | 22 | 457 | 34 | 410 | 1.20e-127 | 377 |
| MS.gene27414.t1 | AT2G01940 | 81.643 | 207 | 29 | 4 | 21 | 218 | 32 | 238 | 2.04e-122 | 365 |
| MS.gene27414.t1 | AT2G01940 | 79.904 | 209 | 30 | 6 | 21 | 218 | 32 | 239 | 4.65e-117 | 351 |
| MS.gene27414.t1 | AT1G25250 | 81.026 | 195 | 32 | 2 | 22 | 211 | 26 | 220 | 8.70e-114 | 340 |
| MS.gene27414.t1 | AT1G25250 | 43.704 | 135 | 69 | 2 | 329 | 457 | 249 | 382 | 1.09e-22 | 100 |
| MS.gene27414.t1 | AT1G25250 | 81.461 | 178 | 28 | 2 | 39 | 211 | 20 | 197 | 9.65e-103 | 311 |
| MS.gene27414.t1 | AT1G25250 | 43.704 | 135 | 69 | 2 | 329 | 457 | 226 | 359 | 7.39e-23 | 100 |
| MS.gene27414.t1 | AT1G68130 | 42.893 | 401 | 134 | 10 | 75 | 457 | 1 | 324 | 1.21e-88 | 274 |
| MS.gene27414.t1 | AT2G01940 | 80.000 | 150 | 25 | 3 | 75 | 219 | 1 | 150 | 1.86e-83 | 261 |
| MS.gene27414.t1 | AT1G25250 | 77.465 | 142 | 27 | 2 | 75 | 211 | 1 | 142 | 7.95e-74 | 235 |
| MS.gene27414.t1 | AT1G25250 | 43.704 | 135 | 69 | 2 | 329 | 457 | 171 | 304 | 2.99e-23 | 100 |
| MS.gene27414.t1 | AT5G66730 | 64.151 | 159 | 56 | 1 | 26 | 184 | 29 | 186 | 1.40e-72 | 238 |
| MS.gene27414.t1 | AT3G50700 | 59.195 | 174 | 65 | 2 | 26 | 194 | 31 | 203 | 3.22e-72 | 235 |
| MS.gene27414.t1 | AT1G55110 | 63.125 | 160 | 57 | 2 | 26 | 184 | 60 | 218 | 6.18e-71 | 232 |
| MS.gene27414.t1 | AT1G55110 | 63.125 | 160 | 57 | 2 | 26 | 184 | 60 | 218 | 6.18e-71 | 232 |
| MS.gene27414.t1 | AT1G55110 | 63.125 | 160 | 57 | 2 | 26 | 184 | 60 | 218 | 6.18e-71 | 232 |
| MS.gene27414.t1 | AT2G02080 | 58.896 | 163 | 66 | 1 | 22 | 184 | 47 | 208 | 9.38e-71 | 233 |
| MS.gene27414.t1 | AT2G02080 | 58.896 | 163 | 66 | 1 | 22 | 184 | 47 | 208 | 9.38e-71 | 233 |
| MS.gene27414.t1 | AT2G02080 | 58.896 | 163 | 66 | 1 | 22 | 184 | 47 | 208 | 9.38e-71 | 233 |
| MS.gene27414.t1 | AT2G02080 | 58.896 | 163 | 66 | 1 | 22 | 184 | 47 | 208 | 9.38e-71 | 233 |
| MS.gene27414.t1 | AT5G03150 | 62.112 | 161 | 59 | 2 | 25 | 184 | 49 | 208 | 3.21e-70 | 232 |
| MS.gene27414.t1 | AT1G03840 | 63.462 | 156 | 56 | 1 | 29 | 184 | 41 | 195 | 3.60e-70 | 231 |
| MS.gene27414.t1 | AT4G02670 | 58.757 | 177 | 66 | 3 | 29 | 199 | 55 | 230 | 1.83e-69 | 227 |
| MS.gene27414.t1 | AT4G02670 | 58.757 | 177 | 66 | 3 | 29 | 199 | 53 | 228 | 1.93e-69 | 227 |
| MS.gene27414.t1 | AT3G13810 | 62.500 | 160 | 58 | 2 | 25 | 183 | 47 | 205 | 7.13e-69 | 228 |
| MS.gene27414.t1 | AT1G14580 | 58.333 | 156 | 64 | 1 | 29 | 184 | 53 | 207 | 7.55e-69 | 227 |
| MS.gene27414.t1 | AT1G14580 | 58.333 | 156 | 64 | 1 | 29 | 184 | 53 | 207 | 7.55e-69 | 227 |
| MS.gene27414.t1 | AT3G13810 | 62.500 | 160 | 58 | 2 | 25 | 183 | 66 | 224 | 8.15e-69 | 228 |
| MS.gene27414.t1 | AT3G13810 | 62.500 | 160 | 58 | 2 | 25 | 183 | 66 | 224 | 8.15e-69 | 228 |
| MS.gene27414.t1 | AT3G13810 | 62.500 | 160 | 58 | 2 | 25 | 183 | 61 | 219 | 8.67e-69 | 228 |
| MS.gene27414.t1 | AT1G14580 | 58.333 | 156 | 64 | 1 | 29 | 184 | 67 | 221 | 1.36e-68 | 227 |
| MS.gene27414.t1 | AT5G44160 | 62.179 | 156 | 58 | 1 | 29 | 184 | 37 | 191 | 3.49e-68 | 225 |
| MS.gene27414.t1 | AT5G60470 | 50.490 | 204 | 94 | 3 | 6 | 208 | 22 | 219 | 4.40e-68 | 225 |
| MS.gene27414.t1 | AT5G60470 | 50.490 | 204 | 94 | 3 | 6 | 208 | 26 | 223 | 4.97e-68 | 224 |
| MS.gene27414.t1 | AT2G02070 | 59.615 | 156 | 62 | 1 | 29 | 184 | 52 | 206 | 2.71e-67 | 226 |
| MS.gene27414.t1 | AT2G02070 | 59.615 | 156 | 62 | 1 | 29 | 184 | 52 | 206 | 2.71e-67 | 226 |
| MS.gene27414.t1 | AT3G45260 | 59.873 | 157 | 61 | 2 | 29 | 184 | 39 | 194 | 3.23e-67 | 222 |
| MS.gene27414.t1 | AT3G45260 | 59.873 | 157 | 61 | 2 | 29 | 184 | 39 | 194 | 3.23e-67 | 222 |
| MS.gene27414.t1 | AT1G03840 | 62.179 | 156 | 56 | 2 | 29 | 184 | 41 | 193 | 1.65e-66 | 222 |
| MS.gene27414.t1 | AT5G44160 | 63.014 | 146 | 53 | 1 | 39 | 184 | 8 | 152 | 1.13e-64 | 215 |
| MS.gene27414.t1 | AT3G13810 | 64.138 | 145 | 50 | 2 | 40 | 183 | 68 | 211 | 9.82e-64 | 214 |
| MS.gene27414.t1 | AT3G13810 | 64.138 | 145 | 50 | 2 | 40 | 183 | 82 | 225 | 1.36e-63 | 214 |
| MS.gene27414.t1 | AT5G60470 | 53.529 | 170 | 77 | 2 | 40 | 208 | 46 | 214 | 1.86e-61 | 207 |
| MS.gene27414.t1 | AT2G02080 | 59.091 | 132 | 53 | 1 | 53 | 184 | 1 | 131 | 5.00e-58 | 198 |
| MS.gene27414.t1 | AT2G02080 | 59.091 | 132 | 53 | 1 | 53 | 184 | 1 | 131 | 5.00e-58 | 198 |
| MS.gene27414.t1 | AT5G22890 | 31.737 | 167 | 94 | 7 | 28 | 179 | 190 | 351 | 2.19e-17 | 84.0 |
| MS.gene27414.t1 | AT1G34370 | 31.210 | 157 | 91 | 5 | 38 | 179 | 14 | 168 | 1.16e-16 | 80.9 |
| MS.gene27414.t1 | AT1G34370 | 31.210 | 157 | 91 | 5 | 38 | 179 | 224 | 378 | 1.95e-16 | 82.0 |
| MS.gene27414.t1 | AT1G34370 | 31.210 | 157 | 91 | 5 | 38 | 179 | 224 | 378 | 1.95e-16 | 82.0 |
| MS.gene27414.t1 | AT3G48550 | 41.772 | 79 | 46 | 0 | 360 | 438 | 79 | 157 | 8.77e-16 | 75.1 |
| MS.gene27414.t1 | AT3G20880 | 29.252 | 147 | 94 | 4 | 50 | 188 | 248 | 392 | 6.85e-12 | 67.8 |
Find 81 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTATGCATCTGTAAATTT+TGG | 0.191998 | 6.2:-74998925 | None:intergenic |
| ATAGTAGTAATAGGAGTAAT+AGG | 0.205036 | 6.2:-75000738 | None:intergenic |
| GCTCTTCTTCCACTAATAAA+AGG | 0.263568 | 6.2:+74998438 | MS.gene27414:CDS |
| TTGAAATTTGTTTCACTTGA+TGG | 0.265033 | 6.2:-75000645 | None:intergenic |
| AGTGAACTTGATAAAGCTTA+TGG | 0.272526 | 6.2:+75001224 | MS.gene27414:CDS |
| CATGATCCTTGTCATGCTTT+AGG | 0.279693 | 6.2:+74999040 | MS.gene27414:CDS |
| GAAGGTGTAATAGTAGTAAT+AGG | 0.296600 | 6.2:-75000747 | None:intergenic |
| ACAAGCAACGGAACAATTAA+AGG | 0.306652 | 6.2:+75001088 | MS.gene27414:CDS |
| GAGTAGAAGTTTATTGTTCT+TGG | 0.315722 | 6.2:-75000784 | None:intergenic |
| TCAACATGAAGATAACTCTT+TGG | 0.326169 | 6.2:+75001322 | MS.gene27414:CDS |
| ACTCAGTTGCATCTCTCAAT+AGG | 0.329653 | 6.2:+75000927 | MS.gene27414:CDS |
| GAGAGTTGAAGTTCCAAGTT+TGG | 0.344241 | 6.2:-75000810 | None:intergenic |
| TTGCTATTGCTACTCTCCTT+TGG | 0.344778 | 6.2:-75001011 | None:intergenic |
| TTTGGTCCCTTTGGAATCCT+TGG | 0.356941 | 6.2:-74998907 | None:intergenic |
| TTGGAGAAAGTTTGAGAAGA+AGG | 0.371907 | 6.2:-75000765 | None:intergenic |
| TTCACCACCTTCAGTAGTTA+TGG | 0.411636 | 6.2:-75001366 | None:intergenic |
| GTGGTTGAGATTCTGAATTA+TGG | 0.414564 | 6.2:-75000575 | None:intergenic |
| AGAGACACCACTTCTGCATC+TGG | 0.419684 | 6.2:-74998833 | None:intergenic |
| TCTCTCTTCAATAGCTTCCA+TGG | 0.428102 | 6.2:-74998962 | None:intergenic |
| AGATTGCACTGCATAACCTT+TGG | 0.429152 | 6.2:-74999137 | None:intergenic |
| AGCAAGGAAACAAATTGAAA+TGG | 0.432424 | 6.2:+75001154 | MS.gene27414:CDS |
| TGGTGCAAACAAGTTGGTTC+AGG | 0.440705 | 6.2:-74999019 | None:intergenic |
| AGAAGACAAACCTGGTGTTC+CGG | 0.442410 | 6.2:-74998474 | None:intergenic |
| GTAGAAAATGTTGATGGAAA+AGG | 0.444254 | 6.2:+75001389 | MS.gene27414:CDS |
| CTCAGTTGCATCTCTCAATA+GGG | 0.455582 | 6.2:+75000928 | MS.gene27414:CDS |
| CGTGTTGGTGTTGTTTGTGG+TGG | 0.457194 | 6.2:-75000832 | None:intergenic |
| CATGCTTTAGGTGATCTTGT+TGG | 0.466169 | 6.2:+74999052 | MS.gene27414:CDS |
| TTTGTTTCACTTGATGGACT+TGG | 0.468237 | 6.2:-75000639 | None:intergenic |
| ACTTCTACTCCATCCAAACT+TGG | 0.469640 | 6.2:+75000797 | MS.gene27414:CDS |
| GTACCAACACTTCTGATTGA+AGG | 0.475892 | 6.2:-75000873 | None:intergenic |
| TCAGAAGATGGAAGTGAAGA+TGG | 0.478640 | 6.2:-74998392 | None:intergenic |
| AAACAACATGGCTTTGTTGA+GGG | 0.481856 | 6.2:+75001058 | MS.gene27414:CDS |
| AGTCGTGTTGGTGTTGTTTG+TGG | 0.482657 | 6.2:-75000835 | None:intergenic |
| TAGTAGTAATAGGAGTAATA+GGG | 0.486179 | 6.2:-75000737 | None:intergenic |
| AGGCTATTCAGAAGGTTAAC+CGG | 0.501979 | 6.2:+75000901 | MS.gene27414:CDS |
| ACATAGTAATCATAAACAAT+GGG | 0.505280 | 6.2:+74999099 | MS.gene27414:CDS |
| AGAAGACCGGCCGGAACACC+AGG | 0.510779 | 6.2:+74998464 | MS.gene27414:CDS |
| CATCAAGATGCTTGCAACAT+GGG | 0.511025 | 6.2:+75000546 | MS.gene27414:CDS |
| GTTGAAGTTCCAAGTTTGGA+TGG | 0.511669 | 6.2:-75000806 | None:intergenic |
| GGTGAAGTAGAAAATGTTGA+TGG | 0.512722 | 6.2:+75001383 | MS.gene27414:CDS |
| GTATGTGAGATCTGCAACCA+AGG | 0.515942 | 6.2:+74998890 | MS.gene27414:CDS |
| CAAACAACATGGCTTTGTTG+AGG | 0.518950 | 6.2:+75001057 | MS.gene27414:CDS |
| GGAACAATTAAAGGTAGCTA+TGG | 0.527664 | 6.2:+75001097 | MS.gene27414:CDS |
| AACATAGTAATCATAAACAA+TGG | 0.531879 | 6.2:+74999098 | MS.gene27414:CDS |
| CTAAAGCATGACAAGGATCA+TGG | 0.532248 | 6.2:-74999039 | None:intergenic |
| ATTTACAGATGCATAGAAGA+AGG | 0.537823 | 6.2:+74998930 | MS.gene27414:CDS |
| GTCTGTTGTCAGAGTCGTGT+TGG | 0.543599 | 6.2:-75000847 | None:intergenic |
| GATGCATAGAAGAAGGCATA+AGG | 0.546337 | 6.2:+74998937 | MS.gene27414:CDS |
| TCTTCTGCCATAACTACTGA+AGG | 0.549896 | 6.2:+75001359 | MS.gene27414:CDS |
| GCTTGAAGCCTTGTTTGCCA+TGG | 0.551999 | 6.2:-75000675 | None:intergenic |
| GCATCAAGATGCTTGCAACA+TGG | 0.560086 | 6.2:+75000545 | MS.gene27414:CDS |
| GACAAACCTGGTGTTCCGGC+CGG | 0.564975 | 6.2:-74998470 | None:intergenic |
| AGAGATGCAACTGAGTTGAC+CGG | 0.567581 | 6.2:-75000920 | None:intergenic |
| AAGATGCTTGCAACATGGGA+AGG | 0.571020 | 6.2:+75000550 | MS.gene27414:CDS |
| CTCAAAACTTGTGGTACTAG+AGG | 0.574559 | 6.2:+74999175 | MS.gene27414:CDS |
| ATACATGTCCATGGCAAACA+AGG | 0.574678 | 6.2:+75000667 | MS.gene27414:CDS |
| AGATAAGCTATTAGCTAACA+TGG | 0.580180 | 6.2:-74998369 | None:intergenic |
| TACTGTGGAGGCTATTCAGA+AGG | 0.581212 | 6.2:+75000893 | MS.gene27414:CDS |
| CATGCAGTTGGTGTTTGAAG+TGG | 0.583027 | 6.2:-75000594 | None:intergenic |
| CAAATTTCAATACATGTCCA+TGG | 0.586561 | 6.2:+75000658 | MS.gene27414:CDS |
| AAAGCTCATCTCAAAACTTG+TGG | 0.590538 | 6.2:+74999166 | MS.gene27414:CDS |
| AGAGGTCATTCATGTGATTG+TGG | 0.593681 | 6.2:+74999193 | MS.gene27414:CDS |
| AAGCTTATGCTGAAGAAGCA+AGG | 0.595645 | 6.2:+75001126 | MS.gene27414:CDS |
| AATCAGAAGTGTTGGTACTG+TGG | 0.596959 | 6.2:+75000878 | MS.gene27414:CDS |
| TAATAAAAGGAAAAGAAGAC+CGG | 0.599740 | 6.2:+74998451 | MS.gene27414:CDS |
| GTTTGTGAAAGATGTTCCAA+AGG | 0.605307 | 6.2:+74999121 | MS.gene27414:CDS |
| GTTCTTGACAAGCATGCAGT+TGG | 0.605757 | 6.2:-75000606 | None:intergenic |
| CTGCAACCAAGGATTCCAAA+GGG | 0.607708 | 6.2:+74998901 | MS.gene27414:CDS |
| GGATCATGGTGCAAACAAGT+TGG | 0.608116 | 6.2:-74999025 | None:intergenic |
| AAAAGGAAAAGAAGACCGGC+CGG | 0.608705 | 6.2:+74998455 | MS.gene27414:CDS |
| ACGCCTTCAATCAGAAGTGT+TGG | 0.611782 | 6.2:+75000870 | MS.gene27414:CDS |
| GAAGAAGGCATAAGGTACCA+TGG | 0.614434 | 6.2:+74998945 | MS.gene27414:CDS |
| AAGAAGCAAGGAAACAAGCA+AGG | 0.615543 | 6.2:+75001138 | MS.gene27414:CDS |
| AATAGATCCAGATGCAGAAG+TGG | 0.615906 | 6.2:+74998826 | MS.gene27414:intron |
| CAGAAGTGTTGGTACTGTGG+AGG | 0.634164 | 6.2:+75000881 | MS.gene27414:CDS |
| AAACTCAAACTCATCACCAA+AGG | 0.637316 | 6.2:+75000995 | MS.gene27414:CDS |
| TCTGCAACCAAGGATTCCAA+AGG | 0.641443 | 6.2:+74998900 | MS.gene27414:CDS |
| GAGGGTTCAAGAACAAGCAA+CGG | 0.651961 | 6.2:+75001076 | MS.gene27414:CDS |
| TCTGCCATAACTACTGAAGG+TGG | 0.661155 | 6.2:+75001362 | MS.gene27414:CDS |
| ATCAACAACAACAAACAACA+TGG | 0.678900 | 6.2:+75001046 | MS.gene27414:CDS |
| AGATCACCTAAAGCATGACA+AGG | 0.685132 | 6.2:-74999046 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAATAATATTAA+TGG | - | chr6.2:74999896-74999915 | None:intergenic | 0.0% |
| !!! | TTATTTATTTTTTTTAAATA+TGG | + | chr6.2:74998686-74998705 | MS.gene27414:intron | 0.0% |
| !! | AATATAAAAGTAAAGAAAAT+GGG | + | chr6.2:74999586-74999605 | MS.gene27414:intron | 10.0% |
| !! | CTACAAAAAATATATATAAA+TGG | - | chr6.2:75000507-75000526 | None:intergenic | 10.0% |
| !! | TATAAAAAAATACTTGAAAA+AGG | - | chr6.2:74999299-74999318 | None:intergenic | 10.0% |
| !!! | AATTTTTATATATACTTCAT+GGG | + | chr6.2:74999416-74999435 | MS.gene27414:intron | 10.0% |
| !!! | CATTTATATATATTTTTTGT+AGG | + | chr6.2:75000505-75000524 | MS.gene27414:intron | 10.0% |
| !!! | TTTGAAACAAAAATATAAAA+AGG | - | chr6.2:75000174-75000193 | None:intergenic | 10.0% |
| !! | AAAACATAAAGAAATGTTTA+AGG | - | chr6.2:74999847-74999866 | None:intergenic | 15.0% |
| !! | GAATATAAAAGTAAAGAAAA+TGG | + | chr6.2:74999585-74999604 | MS.gene27414:intron | 15.0% |
| !! | GTCAATTATTATTGTTAATT+AGG | + | chr6.2:75000317-75000336 | MS.gene27414:intron | 15.0% |
| !! | TAAATTTACATATACTAGTA+GGG | + | chr6.2:75000455-75000474 | MS.gene27414:intron | 15.0% |
| !! | TATTACTATTTAAAGAATTG+AGG | - | chr6.2:75000407-75000426 | None:intergenic | 15.0% |
| !!! | AAATTGTTCTTTATTTTGTT+TGG | + | chr6.2:74998798-74998817 | MS.gene27414:intron | 15.0% |
| !!! | GAATTTTTATATATACTTCA+TGG | + | chr6.2:74999415-74999434 | MS.gene27414:intron | 15.0% |
| !! | AAAAAACATGATTCAAGAAT+TGG | - | chr6.2:74998587-74998606 | None:intergenic | 20.0% |
| !! | AACATAGTAATCATAAACAA+TGG | + | chr6.2:74999098-74999117 | MS.gene27414:CDS | 20.0% |
| !! | ACATAGTAATCATAAACAAT+GGG | + | chr6.2:74999099-74999118 | MS.gene27414:CDS | 20.0% |
| !! | ATGATGATTATAATGAATTG+AGG | + | chr6.2:74999500-74999519 | MS.gene27414:intron | 20.0% |
| !! | GTAAATTTACATATACTAGT+AGG | + | chr6.2:75000454-75000473 | MS.gene27414:intron | 20.0% |
| !! | TAATAATAAAATCACACACA+TGG | - | chr6.2:75000265-75000284 | None:intergenic | 20.0% |
| !! | TCAAAAATATATTTGACTGA+TGG | + | chr6.2:74999650-74999669 | MS.gene27414:intron | 20.0% |
| !! | TTCATTAGATATAAAGAGTT+AGG | - | chr6.2:75000149-75000168 | None:intergenic | 20.0% |
| !! | TTGATTCTTGATTCATAAAA+TGG | + | chr6.2:74999348-74999367 | MS.gene27414:intron | 20.0% |
| !!! | AAAAAGGAAGATATGTTTTT+TGG | + | chr6.2:74999558-74999577 | MS.gene27414:intron | 20.0% |
| !!! | TCATGTTTTTTTTGTTGTAT+TGG | + | chr6.2:74998596-74998615 | MS.gene27414:intron | 20.0% |
| !!! | TTTTGTCCTTTTTATTTTAG+TGG | + | chr6.2:74999992-75000011 | MS.gene27414:intron | 20.0% |
| !!! | TTTTTGAAGAAAACACAAAA+CGG | - | chr6.2:74999785-74999804 | None:intergenic | 20.0% |
| ! | AAAAATGTACAAAGGAAGAA+AGG | - | chr6.2:75000125-75000144 | None:intergenic | 25.0% |
| ! | AAAAGTAAAGAAAATGGGAA+TGG | + | chr6.2:74999591-74999610 | MS.gene27414:intron | 25.0% |
| ! | AATGAAAAAGTGGATGTAAA+AGG | - | chr6.2:75000084-75000103 | None:intergenic | 25.0% |
| ! | AGTTAGGAAAAAATGTACAA+AGG | - | chr6.2:75000133-75000152 | None:intergenic | 25.0% |
| ! | ATAGTAGTAATAGGAGTAAT+AGG | - | chr6.2:75000741-75000760 | None:intergenic | 25.0% |
| ! | ATGAATCAAGAATCAATCAT+AGG | - | chr6.2:74999344-74999363 | None:intergenic | 25.0% |
| ! | CAGTTTCCACTAAAATAAAA+AGG | - | chr6.2:75000001-75000020 | None:intergenic | 25.0% |
| ! | TAATAAAAGGAAAAGAAGAC+CGG | + | chr6.2:74998451-74998470 | MS.gene27414:CDS | 25.0% |
| ! | TAGTAGTAATAGGAGTAATA+GGG | - | chr6.2:75000740-75000759 | None:intergenic | 25.0% |
| ! | TTATATATACTTCATGGGAT+GGG | + | chr6.2:74999421-74999440 | MS.gene27414:intron | 25.0% |
| ! | TTTATATATACTTCATGGGA+TGG | + | chr6.2:74999420-74999439 | MS.gene27414:intron | 25.0% |
| ! | TTTGTGTAGAAAGAATGAAA+TGG | - | chr6.2:74999816-74999835 | None:intergenic | 25.0% |
| !! | AAAACTCTTTTTCTAACAAC+TGG | - | chr6.2:74998992-74999011 | None:intergenic | 25.0% |
| !! | TCTTCTTTTCCTTTTATTAG+TGG | - | chr6.2:74998450-74998469 | None:intergenic | 25.0% |
| !! | TTCTATGCATCTGTAAATTT+TGG | - | chr6.2:74998928-74998947 | None:intergenic | 25.0% |
| !! | TTGAAATTTGTTTCACTTGA+TGG | - | chr6.2:75000648-75000667 | None:intergenic | 25.0% |
| !! | TTGGGATTTGACTTTAAAAA+AGG | + | chr6.2:74999542-74999561 | MS.gene27414:intron | 25.0% |
| !!! | AAAACTTGAGTTGTTTTACT+TGG | + | chr6.2:74999523-74999542 | MS.gene27414:intron | 25.0% |
| !!! | AAACTTGAGTTGTTTTACTT+GGG | + | chr6.2:74999524-74999543 | MS.gene27414:intron | 25.0% |
| !!! | CTTTTTATTTTAGTGGAAAC+TGG | + | chr6.2:74999999-75000018 | MS.gene27414:intron | 25.0% |
| !!! | GTTCTTTATTTTGTTTGGTT+TGG | + | chr6.2:74998803-74998822 | MS.gene27414:intron | 25.0% |
| !!! | GTTGATTCTTTTGTTGTTTT+TGG | - | chr6.2:75000705-75000724 | None:intergenic | 25.0% |
| AAGAGAGACAAATGAAAAAG+TGG | - | chr6.2:75000094-75000113 | None:intergenic | 30.0% | |
| AATGGGAATGGAAAAACAAA+AGG | + | chr6.2:74999603-74999622 | MS.gene27414:intron | 30.0% | |
| AGCAAGGAAACAAATTGAAA+TGG | + | chr6.2:75001154-75001173 | MS.gene27414:CDS | 30.0% | |
| AGTGAACTTGATAAAGCTTA+TGG | + | chr6.2:75001224-75001243 | MS.gene27414:CDS | 30.0% | |
| ATCAACAACAACAAACAACA+TGG | + | chr6.2:75001046-75001065 | MS.gene27414:CDS | 30.0% | |
| ATTTACAGATGCATAGAAGA+AGG | + | chr6.2:74998930-74998949 | MS.gene27414:CDS | 30.0% | |
| CAAATTTCAATACATGTCCA+TGG | + | chr6.2:75000658-75000677 | MS.gene27414:CDS | 30.0% | |
| GAGTAGAAGTTTATTGTTCT+TGG | - | chr6.2:75000787-75000806 | None:intergenic | 30.0% | |
| TCAACATGAAGATAACTCTT+TGG | + | chr6.2:75001322-75001341 | MS.gene27414:CDS | 30.0% | |
| ! | AAAAAGAAAGAGGATTTTGG+AGG | - | chr6.2:74998503-74998522 | None:intergenic | 30.0% |
| ! | CAATTCAGCTTTATGTTTCT+GGG | + | chr6.2:75000378-75000397 | MS.gene27414:intron | 30.0% |
| ! | CCATTTTCATTGCAAGAAAA+AGG | - | chr6.2:74998419-74998438 | None:intergenic | 30.0% |
| ! | CCTTTTTCTTGCAATGAAAA+TGG | + | chr6.2:74998416-74998435 | MS.gene27414:CDS | 30.0% |
| ! | GAAGGTGTAATAGTAGTAAT+AGG | - | chr6.2:75000750-75000769 | None:intergenic | 30.0% |
| ! | GTAGAAAATGTTGATGGAAA+AGG | + | chr6.2:75001389-75001408 | MS.gene27414:CDS | 30.0% |
| ! | TCTGATTCCAACAATGTTTT+TGG | - | chr6.2:74998863-74998882 | None:intergenic | 30.0% |
| !!! | AGGAAGATATGTTTTTTGGA+AGG | + | chr6.2:74999562-74999581 | MS.gene27414:intron | 30.0% |
| !!! | GGAAGATATGTTTTTTGGAA+GGG | + | chr6.2:74999563-74999582 | MS.gene27414:intron | 30.0% |
| AAACTCAAACTCATCACCAA+AGG | + | chr6.2:75000995-75001014 | MS.gene27414:CDS | 35.0% | |
| AAAGCTCATCTCAAAACTTG+TGG | + | chr6.2:74999166-74999185 | MS.gene27414:CDS | 35.0% | |
| ACAAGCAACGGAACAATTAA+AGG | + | chr6.2:75001088-75001107 | MS.gene27414:CDS | 35.0% | |
| CAAAACGGTTATAAGAGCAA+CGG | - | chr6.2:74999770-74999789 | None:intergenic | 35.0% | |
| GCTCTTCTTCCACTAATAAA+AGG | + | chr6.2:74998438-74998457 | MS.gene27414:CDS | 35.0% | |
| GGAACAATTAAAGGTAGCTA+TGG | + | chr6.2:75001097-75001116 | MS.gene27414:CDS | 35.0% | |
| GGTGAAGTAGAAAATGTTGA+TGG | + | chr6.2:75001383-75001402 | MS.gene27414:CDS | 35.0% | |
| GTGGTTGAGATTCTGAATTA+TGG | - | chr6.2:75000578-75000597 | None:intergenic | 35.0% | |
| GTTATAAGAGCAACGGAAAA+CGG | - | chr6.2:74999763-74999782 | None:intergenic | 35.0% | |
| GTTTGTGAAAGATGTTCCAA+AGG | + | chr6.2:74999121-74999140 | MS.gene27414:CDS | 35.0% | |
| TCTCTCACCAAAAACATTGT+TGG | + | chr6.2:74998853-74998872 | MS.gene27414:CDS | 35.0% | |
| TTGGAGAAAGTTTGAGAAGA+AGG | - | chr6.2:75000768-75000787 | None:intergenic | 35.0% | |
| ! | AAAGTGGATGTAAAAGGTGT+TGG | - | chr6.2:75000078-75000097 | None:intergenic | 35.0% |
| ! | GCAATTCAGCTTTATGTTTC+TGG | + | chr6.2:75000377-75000396 | MS.gene27414:intron | 35.0% |
| ! | GCGAAAAAGAAAGAGGATTT+TGG | - | chr6.2:74998506-74998525 | None:intergenic | 35.0% |
| ! | GTTAGAGTTTAGAAGTACGA+AGG | - | chr6.2:74998543-74998562 | None:intergenic | 35.0% |
| ! | TATCCACTGGATTTTCCAAA+TGG | - | chr6.2:75000045-75000064 | None:intergenic | 35.0% |
| !! | AAACAACATGGCTTTGTTGA+GGG | + | chr6.2:75001058-75001077 | MS.gene27414:CDS | 35.0% |
| !! | GATGTAAAAGGTGTTGGAAA+AGG | - | chr6.2:75000072-75000091 | None:intergenic | 35.0% |
| !! | TCTGTAAATTTTGGTCCCTT+TGG | - | chr6.2:74998919-74998938 | None:intergenic | 35.0% |
| !! | TTTGTTTCACTTGATGGACT+TGG | - | chr6.2:75000642-75000661 | None:intergenic | 35.0% |
| AAGAAGCAAGGAAACAAGCA+AGG | + | chr6.2:75001138-75001157 | MS.gene27414:CDS | 40.0% | |
| AAGCTTATGCTGAAGAAGCA+AGG | + | chr6.2:75001126-75001145 | MS.gene27414:CDS | 40.0% | |
| AATAGATCCAGATGCAGAAG+TGG | + | chr6.2:74998826-74998845 | MS.gene27414:intron | 40.0% | |
| AATCACACACATGGATGAAG+AGG | - | chr6.2:75000256-75000275 | None:intergenic | 40.0% | |
| ACTCAGTTGCATCTCTCAAT+AGG | + | chr6.2:75000927-75000946 | MS.gene27414:CDS | 40.0% | |
| ACTTCTACTCCATCCAAACT+TGG | + | chr6.2:75000797-75000816 | MS.gene27414:CDS | 40.0% | |
| AGAGGTCATTCATGTGATTG+TGG | + | chr6.2:74999193-74999212 | MS.gene27414:CDS | 40.0% | |
| AGATCACCTAAAGCATGACA+AGG | - | chr6.2:74999049-74999068 | None:intergenic | 40.0% | |
| AGATTGCACTGCATAACCTT+TGG | - | chr6.2:74999140-74999159 | None:intergenic | 40.0% | |
| AGGCTATTCAGAAGGTTAAC+CGG | + | chr6.2:75000901-75000920 | MS.gene27414:CDS | 40.0% | |
| ATACATGTCCATGGCAAACA+AGG | + | chr6.2:75000667-75000686 | MS.gene27414:CDS | 40.0% | |
| CAAGAAAAAGGCTCAGAAGA+TGG | - | chr6.2:74998407-74998426 | None:intergenic | 40.0% | |
| CATCAAGATGCTTGCAACAT+GGG | + | chr6.2:75000546-75000565 | MS.gene27414:CDS | 40.0% | |
| CATGATCCTTGTCATGCTTT+AGG | + | chr6.2:74999040-74999059 | MS.gene27414:CDS | 40.0% | |
| CTAAAGCATGACAAGGATCA+TGG | - | chr6.2:74999042-74999061 | None:intergenic | 40.0% | |
| CTCAAAACTTGTGGTACTAG+AGG | + | chr6.2:74999175-74999194 | MS.gene27414:CDS | 40.0% | |
| CTCAGTTGCATCTCTCAATA+GGG | + | chr6.2:75000928-75000947 | MS.gene27414:CDS | 40.0% | |
| GAGAGTTGAAGTTCCAAGTT+TGG | - | chr6.2:75000813-75000832 | None:intergenic | 40.0% | |
| GTACCAACACTTCTGATTGA+AGG | - | chr6.2:75000876-75000895 | None:intergenic | 40.0% | |
| GTTGAAGTTCCAAGTTTGGA+TGG | - | chr6.2:75000809-75000828 | None:intergenic | 40.0% | |
| TCACACTGTTCATTGACAGT+TGG | + | chr6.2:74999717-74999736 | MS.gene27414:intron | 40.0% | |
| TCAGAAGATGGAAGTGAAGA+TGG | - | chr6.2:74998395-74998414 | None:intergenic | 40.0% | |
| TCTCTCTTCAATAGCTTCCA+TGG | - | chr6.2:74998965-74998984 | None:intergenic | 40.0% | |
| TCTTCTGCCATAACTACTGA+AGG | + | chr6.2:75001359-75001378 | MS.gene27414:CDS | 40.0% | |
| TTCACCACCTTCAGTAGTTA+TGG | - | chr6.2:75001369-75001388 | None:intergenic | 40.0% | |
| ! | ACTGGATTTTCCAAATGGTG+GGG | - | chr6.2:75000040-75000059 | None:intergenic | 40.0% |
| ! | ATTGTGGTCGTGTTTTCTCA+AGG | + | chr6.2:74999209-74999228 | MS.gene27414:CDS | 40.0% |
| ! | CACTGGATTTTCCAAATGGT+GGG | - | chr6.2:75000041-75000060 | None:intergenic | 40.0% |
| ! | CATGCTTTAGGTGATCTTGT+TGG | + | chr6.2:74999052-74999071 | MS.gene27414:CDS | 40.0% |
| ! | GATGCATAGAAGAAGGCATA+AGG | + | chr6.2:74998937-74998956 | MS.gene27414:CDS | 40.0% |
| ! | TTGCTATTGCTACTCTCCTT+TGG | - | chr6.2:75001014-75001033 | None:intergenic | 40.0% |
| !! | AATCAGAAGTGTTGGTACTG+TGG | + | chr6.2:75000878-75000897 | MS.gene27414:CDS | 40.0% |
| !! | ATCCTCTTTCTTTTTCGCAC+TGG | + | chr6.2:74998508-74998527 | MS.gene27414:intron | 40.0% |
| !! | CAAACAACATGGCTTTGTTG+AGG | + | chr6.2:75001057-75001076 | MS.gene27414:CDS | 40.0% |
| !! | TCCTCTTTCTTTTTCGCACT+GGG | + | chr6.2:74998509-74998528 | MS.gene27414:intron | 40.0% |
| !! | TGGAAAAGGTATCTATCCAC+TGG | - | chr6.2:75000058-75000077 | None:intergenic | 40.0% |
| AAAAGGAAAAGAAGACCGGC+CGG | + | chr6.2:74998455-74998474 | MS.gene27414:CDS | 45.0% | |
| AAGATGCTTGCAACATGGGA+AGG | + | chr6.2:75000550-75000569 | MS.gene27414:CDS | 45.0% | |
| ACCCAGTGCGAAAAAGAAAG+AGG | - | chr6.2:74998513-74998532 | None:intergenic | 45.0% | |
| AGAAGACAAACCTGGTGTTC+CGG | - | chr6.2:74998477-74998496 | None:intergenic | 45.0% | |
| CCACCATTTGGAAAATCCAG+TGG | + | chr6.2:75000039-75000058 | MS.gene27414:intron | 45.0% | |
| CTGCAACCAAGGATTCCAAA+GGG | + | chr6.2:74998901-74998920 | MS.gene27414:CDS | 45.0% | |
| GAGGGTTCAAGAACAAGCAA+CGG | + | chr6.2:75001076-75001095 | MS.gene27414:CDS | 45.0% | |
| GCATCAAGATGCTTGCAACA+TGG | + | chr6.2:75000545-75000564 | MS.gene27414:CDS | 45.0% | |
| GGATCATGGTGCAAACAAGT+TGG | - | chr6.2:74999028-74999047 | None:intergenic | 45.0% | |
| GTATGTGAGATCTGCAACCA+AGG | + | chr6.2:74998890-74998909 | MS.gene27414:CDS | 45.0% | |
| GTTCTTGACAAGCATGCAGT+TGG | - | chr6.2:75000609-75000628 | None:intergenic | 45.0% | |
| TACTGTGGAGGCTATTCAGA+AGG | + | chr6.2:75000893-75000912 | MS.gene27414:CDS | 45.0% | |
| TCTGCAACCAAGGATTCCAA+AGG | + | chr6.2:74998900-74998919 | MS.gene27414:CDS | 45.0% | |
| TCTGCCATAACTACTGAAGG+TGG | + | chr6.2:75001362-75001381 | MS.gene27414:CDS | 45.0% | |
| ! | ACGCCTTCAATCAGAAGTGT+TGG | + | chr6.2:75000870-75000889 | MS.gene27414:CDS | 45.0% |
| ! | AGAGATGCAACTGAGTTGAC+CGG | - | chr6.2:75000923-75000942 | None:intergenic | 45.0% |
| ! | CATGCAGTTGGTGTTTGAAG+TGG | - | chr6.2:75000597-75000616 | None:intergenic | 45.0% |
| ! | CCACTGGATTTTCCAAATGG+TGG | - | chr6.2:75000042-75000061 | None:intergenic | 45.0% |
| ! | GAAGAAGGCATAAGGTACCA+TGG | + | chr6.2:74998945-74998964 | MS.gene27414:CDS | 45.0% |
| !! | AGTCGTGTTGGTGTTGTTTG+TGG | - | chr6.2:75000838-75000857 | None:intergenic | 45.0% |
| !! | GATTTTCCAAATGGTGGGGT+GGG | - | chr6.2:75000036-75000055 | None:intergenic | 45.0% |
| !! | TGGTGCAAACAAGTTGGTTC+AGG | - | chr6.2:74999022-74999041 | None:intergenic | 45.0% |
| !! | TTTGGTCCCTTTGGAATCCT+TGG | - | chr6.2:74998910-74998929 | None:intergenic | 45.0% |
| !!! | ATACATTTTTTTTTATATTA+AGG | - | chr6.2:74999678-74999697 | None:intergenic | 5.0% |
| !!! | ATTTATATATATTTTTTGTA+GGG | + | chr6.2:75000506-75000525 | MS.gene27414:intron | 5.0% |
| AGAGACACCACTTCTGCATC+TGG | - | chr6.2:74998836-74998855 | None:intergenic | 50.0% | |
| AGCAACGGAAAACGGAGCAT+TGG | - | chr6.2:74999755-74999774 | None:intergenic | 50.0% | |
| GGAGGAGAAGAAGACAAACC+TGG | - | chr6.2:74998485-74998504 | None:intergenic | 50.0% | |
| GTCTGTTGTCAGAGTCGTGT+TGG | - | chr6.2:75000850-75000869 | None:intergenic | 50.0% | |
| !! | CAGAAGTGTTGGTACTGTGG+AGG | + | chr6.2:75000881-75000900 | MS.gene27414:CDS | 50.0% |
| !! | CGTGTTGGTGTTGTTTGTGG+TGG | - | chr6.2:75000835-75000854 | None:intergenic | 50.0% |
| !! | GCTTGAAGCCTTGTTTGCCA+TGG | - | chr6.2:75000678-75000697 | None:intergenic | 50.0% |
| !! | GGATTTTCCAAATGGTGGGG+TGG | - | chr6.2:75000037-75000056 | None:intergenic | 50.0% |
| CTTCTTCCCACCCCACCATT+TGG | + | chr6.2:75000027-75000046 | MS.gene27414:intron | 55.0% | |
| ! | AATGGTGGGGTGGGAAGAAG+AGG | - | chr6.2:75000027-75000046 | None:intergenic | 55.0% |
| GACAAACCTGGTGTTCCGGC+CGG | - | chr6.2:74998473-74998492 | None:intergenic | 60.0% | |
| AGAAGACCGGCCGGAACACC+AGG | + | chr6.2:74998464-74998483 | MS.gene27414:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 74998371 | 75001427 | 74998371 | ID=MS.gene27414 |
| chr6.2 | mRNA | 74998371 | 75001427 | 74998371 | ID=MS.gene27414.t1;Parent=MS.gene27414 |
| chr6.2 | exon | 74998371 | 74998485 | 74998371 | ID=MS.gene27414.t1.exon1;Parent=MS.gene27414.t1 |
| chr6.2 | CDS | 74998371 | 74998485 | 74998371 | ID=cds.MS.gene27414.t1;Parent=MS.gene27414.t1 |
| chr6.2 | exon | 74998831 | 74999230 | 74998831 | ID=MS.gene27414.t1.exon2;Parent=MS.gene27414.t1 |
| chr6.2 | CDS | 74998831 | 74999230 | 74998831 | ID=cds.MS.gene27414.t1;Parent=MS.gene27414.t1 |
| chr6.2 | exon | 75000527 | 75001427 | 75000527 | ID=MS.gene27414.t1.exon3;Parent=MS.gene27414.t1 |
| chr6.2 | CDS | 75000527 | 75001427 | 75000527 | ID=cds.MS.gene27414.t1;Parent=MS.gene27414.t1 |
| Gene Sequence |
| Protein sequence |
