Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38773.t1 | AIT98182.1 | 99.8 | 498 | 1 | 0 | 1 | 498 | 1 | 498 | 1.10E-290 | 1008.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38773.t1 | Q43503 | 82.4 | 505 | 77 | 3 | 1 | 498 | 1 | 500 | 3.0e-244 | 845.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38773.t1 | A0A097KXQ3 | 99.8 | 498 | 1 | 0 | 1 | 498 | 1 | 498 | 8.1e-291 | 1008.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene38773 | 0.827412 | 1.59E-54 | -1.69E-46 |
| MS.gene049171 | MS.gene38773 | 0.821797 | 3.34E-53 | -1.69E-46 |
| MS.gene049222 | MS.gene38773 | 0.848893 | 4.58E-60 | -1.69E-46 |
| MS.gene049320 | MS.gene38773 | 0.800779 | 1.23E-48 | -1.69E-46 |
| MS.gene049356 | MS.gene38773 | 0.810005 | 1.43E-50 | -1.69E-46 |
| MS.gene049396 | MS.gene38773 | 0.828232 | 1.01E-54 | -1.69E-46 |
| MS.gene049609 | MS.gene38773 | 0.849253 | 3.64E-60 | -1.69E-46 |
| MS.gene049805 | MS.gene38773 | 0.825824 | 3.80E-54 | -1.69E-46 |
| MS.gene050538 | MS.gene38773 | 0.836409 | 9.52E-57 | -1.69E-46 |
| MS.gene050593 | MS.gene38773 | 0.8236 | 1.27E-53 | -1.69E-46 |
| MS.gene050625 | MS.gene38773 | 0.813153 | 2.96E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene38773 | 0.852387 | 4.77E-61 | -1.69E-46 |
| MS.gene050747 | MS.gene38773 | 0.866702 | 2.35E-65 | -1.69E-46 |
| MS.gene050772 | MS.gene38773 | 0.859786 | 3.25E-63 | -1.69E-46 |
| MS.gene05080 | MS.gene38773 | 0.8652 | 7.01E-65 | -1.69E-46 |
| MS.gene05081 | MS.gene38773 | 0.803213 | 3.88E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene38773 | 0.812809 | 3.52E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene38773 | 0.81221 | 4.75E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene38773 | 0.847198 | 1.35E-59 | -1.69E-46 |
| MS.gene05105 | MS.gene38773 | 0.867581 | 1.23E-65 | -1.69E-46 |
| MS.gene051387 | MS.gene38773 | 0.821359 | 4.21E-53 | -1.69E-46 |
| MS.gene051666 | MS.gene38773 | 0.871528 | 6.38E-67 | -1.69E-46 |
| MS.gene051734 | MS.gene38773 | 0.810136 | 1.34E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene38773 | 0.824534 | 7.66E-54 | -1.69E-46 |
| MS.gene051858 | MS.gene38773 | 0.821146 | 4.72E-53 | -1.69E-46 |
| MS.gene051874 | MS.gene38773 | 0.828489 | 8.74E-55 | -1.69E-46 |
| MS.gene052164 | MS.gene38773 | 0.848122 | 7.49E-60 | -1.69E-46 |
| MS.gene052414 | MS.gene38773 | 0.809437 | 1.89E-50 | -1.69E-46 |
| MS.gene052421 | MS.gene38773 | 0.835661 | 1.47E-56 | -1.69E-46 |
| MS.gene052501 | MS.gene38773 | 0.818554 | 1.85E-52 | -1.69E-46 |
| MS.gene052503 | MS.gene38773 | 0.813679 | 2.27E-51 | -1.69E-46 |
| MS.gene052505 | MS.gene38773 | 0.815971 | 7.03E-52 | -1.69E-46 |
| MS.gene052506 | MS.gene38773 | 0.802964 | 4.37E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene38773 | 0.80028 | 1.55E-48 | -1.69E-46 |
| MS.gene052823 | MS.gene38773 | 0.806049 | 9.94E-50 | -1.69E-46 |
| MS.gene052825 | MS.gene38773 | 0.804381 | 2.22E-49 | -1.69E-46 |
| MS.gene052982 | MS.gene38773 | 0.823896 | 1.08E-53 | -1.69E-46 |
| MS.gene053009 | MS.gene38773 | 0.804428 | 2.17E-49 | -1.69E-46 |
| MS.gene053103 | MS.gene38773 | 0.83372 | 4.53E-56 | -1.69E-46 |
| MS.gene053104 | MS.gene38773 | 0.83227 | 1.04E-55 | -1.69E-46 |
| MS.gene053203 | MS.gene38773 | 0.800765 | 1.24E-48 | -1.69E-46 |
| MS.gene053207 | MS.gene38773 | 0.833424 | 5.38E-56 | -1.69E-46 |
| MS.gene053213 | MS.gene38773 | 0.815924 | 7.21E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene38773 | 0.809425 | 1.90E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene38773 | 0.813473 | 2.51E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene38773 | 0.864678 | 1.02E-64 | -1.69E-46 |
| MS.gene053626 | MS.gene38773 | 0.872161 | 3.93E-67 | -1.69E-46 |
| MS.gene053632 | MS.gene38773 | 0.849287 | 3.56E-60 | -1.69E-46 |
| MS.gene053824 | MS.gene38773 | 0.834951 | 2.23E-56 | -1.69E-46 |
| MS.gene053916 | MS.gene38773 | 0.87488 | 4.78E-68 | -1.69E-46 |
| MS.gene054003 | MS.gene38773 | 0.825647 | 4.18E-54 | -1.69E-46 |
| MS.gene054408 | MS.gene38773 | 0.829686 | 4.48E-55 | -1.69E-46 |
| MS.gene054595 | MS.gene38773 | 0.805754 | 1.15E-49 | -1.69E-46 |
| MS.gene054600 | MS.gene38773 | 0.813142 | 2.97E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene38773 | 0.815113 | 1.09E-51 | -1.69E-46 |
| MS.gene054927 | MS.gene38773 | 0.865377 | 6.17E-65 | -1.69E-46 |
| MS.gene05494 | MS.gene38773 | 0.814539 | 1.46E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene38773 | 0.864753 | 9.69E-65 | -1.69E-46 |
| MS.gene055116 | MS.gene38773 | 0.805594 | 1.24E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene38773 | 0.811174 | 7.99E-51 | -1.69E-46 |
| MS.gene055224 | MS.gene38773 | 0.836757 | 7.76E-57 | -1.69E-46 |
| MS.gene055289 | MS.gene38773 | 0.839442 | 1.58E-57 | -1.69E-46 |
| MS.gene055502 | MS.gene38773 | 0.81221 | 4.75E-51 | -1.69E-46 |
| MS.gene055577 | MS.gene38773 | 0.836922 | 7.04E-57 | -1.69E-46 |
| MS.gene055722 | MS.gene38773 | 0.850895 | 1.26E-60 | -1.69E-46 |
| MS.gene055741 | MS.gene38773 | 0.800745 | 1.25E-48 | -1.69E-46 |
| MS.gene055748 | MS.gene38773 | 0.804707 | 1.90E-49 | -1.69E-46 |
| MS.gene055750 | MS.gene38773 | 0.819037 | 1.43E-52 | -1.69E-46 |
| MS.gene055909 | MS.gene38773 | 0.805122 | 1.55E-49 | -1.69E-46 |
| MS.gene055911 | MS.gene38773 | 0.803202 | 3.90E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene38773 | 0.81781 | 2.72E-52 | -1.69E-46 |
| MS.gene055941 | MS.gene38773 | 0.810448 | 1.15E-50 | -1.69E-46 |
| MS.gene05602 | MS.gene38773 | 0.821187 | 4.61E-53 | -1.69E-46 |
| MS.gene056166 | MS.gene38773 | 0.829375 | 5.33E-55 | -1.69E-46 |
| MS.gene056422 | MS.gene38773 | 0.825993 | 3.46E-54 | -1.69E-46 |
| MS.gene056446 | MS.gene38773 | 0.810621 | 1.05E-50 | -1.69E-46 |
| MS.gene056448 | MS.gene38773 | 0.807374 | 5.22E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene38773 | 0.842339 | 2.75E-58 | -1.69E-46 |
| MS.gene057048 | MS.gene38773 | 0.812921 | 3.32E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene38773 | 0.833198 | 6.12E-56 | -1.69E-46 |
| MS.gene057129 | MS.gene38773 | 0.802423 | 5.65E-49 | -1.69E-46 |
| MS.gene057146 | MS.gene38773 | 0.818129 | 2.30E-52 | -1.69E-46 |
| MS.gene057289 | MS.gene38773 | 0.809743 | 1.63E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene38773 | 0.820899 | 5.38E-53 | -1.69E-46 |
| MS.gene057734 | MS.gene38773 | 0.850171 | 2.02E-60 | -1.69E-46 |
| MS.gene05787 | MS.gene38773 | 0.813533 | 2.44E-51 | -1.69E-46 |
| MS.gene058120 | MS.gene38773 | 0.810864 | 9.33E-51 | -1.69E-46 |
| MS.gene058130 | MS.gene38773 | 0.852651 | 4.01E-61 | -1.69E-46 |
| MS.gene058338 | MS.gene38773 | 0.811474 | 6.88E-51 | -1.69E-46 |
| MS.gene058376 | MS.gene38773 | 0.807888 | 4.06E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene38773 | 0.834181 | 3.48E-56 | -1.69E-46 |
| MS.gene058419 | MS.gene38773 | 0.823918 | 1.07E-53 | -1.69E-46 |
| MS.gene058544 | MS.gene38773 | 0.800246 | 1.58E-48 | -1.69E-46 |
| MS.gene058700 | MS.gene38773 | 0.800811 | 1.21E-48 | -1.69E-46 |
| MS.gene058723 | MS.gene38773 | 0.810683 | 1.02E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene38773 | 0.806206 | 9.21E-50 | -1.69E-46 |
| MS.gene058838 | MS.gene38773 | 0.817667 | 2.93E-52 | -1.69E-46 |
| MS.gene058948 | MS.gene38773 | 0.808961 | 2.39E-50 | -1.69E-46 |
| MS.gene059023 | MS.gene38773 | 0.820197 | 7.79E-53 | -1.69E-46 |
| MS.gene05913 | MS.gene38773 | 0.821842 | 3.26E-53 | -1.69E-46 |
| MS.gene05934 | MS.gene38773 | 0.823925 | 1.07E-53 | -1.69E-46 |
| MS.gene059367 | MS.gene38773 | 0.802735 | 4.87E-49 | -1.69E-46 |
| MS.gene059368 | MS.gene38773 | 0.818576 | 1.82E-52 | -1.69E-46 |
| MS.gene059667 | MS.gene38773 | 0.861341 | 1.10E-63 | -1.69E-46 |
| MS.gene059688 | MS.gene38773 | 0.829214 | 5.83E-55 | -1.69E-46 |
| MS.gene059692 | MS.gene38773 | 0.806211 | 9.18E-50 | -1.69E-46 |
| MS.gene059695 | MS.gene38773 | 0.814212 | 1.73E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene38773 | 0.832521 | 9.01E-56 | -1.69E-46 |
| MS.gene059902 | MS.gene38773 | 0.819754 | 9.84E-53 | -1.69E-46 |
| MS.gene060403 | MS.gene38773 | 0.801771 | 7.69E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene38773 | 0.815496 | 8.97E-52 | -1.69E-46 |
| MS.gene060835 | MS.gene38773 | 0.817708 | 2.87E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene38773 | 0.847502 | 1.11E-59 | -1.69E-46 |
| MS.gene06092 | MS.gene38773 | 0.858439 | 8.23E-63 | -1.69E-46 |
| MS.gene06097 | MS.gene38773 | 0.831715 | 1.43E-55 | -1.69E-46 |
| MS.gene061041 | MS.gene38773 | 0.80628 | 8.88E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene38773 | 0.801293 | 9.64E-49 | -1.69E-46 |
| MS.gene061154 | MS.gene38773 | 0.800058 | 1.72E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38773.t1 | MTR_7g090150 | 99.598 | 498 | 2 | 0 | 1 | 498 | 1 | 498 | 0.0 | 1027 |
| MS.gene38773.t1 | MTR_2g086700 | 51.935 | 491 | 218 | 3 | 7 | 493 | 20 | 496 | 0.0 | 527 |
| MS.gene38773.t1 | MTR_2g086730 | 53.741 | 441 | 196 | 2 | 55 | 493 | 50 | 484 | 5.71e-177 | 506 |
| MS.gene38773.t1 | MTR_2g040060 | 38.702 | 447 | 253 | 10 | 48 | 479 | 72 | 512 | 1.11e-89 | 284 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38773.t1 | AT3G10230 | 78.063 | 506 | 98 | 5 | 1 | 498 | 1 | 501 | 0.0 | 823 |
| MS.gene38773.t1 | AT3G10230 | 82.385 | 369 | 63 | 1 | 132 | 498 | 1 | 369 | 0.0 | 653 |
| MS.gene38773.t1 | AT5G57030 | 37.947 | 419 | 240 | 8 | 82 | 496 | 109 | 511 | 2.01e-91 | 288 |
Find 127 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATTTAAGAAGGAAAATT+TGG | 0.155125 | 7.1:-17201301 | MS.gene38773:CDS |
| CCAGGTTGCGTACGGGATTT+TGG | 0.157916 | 7.1:-17200776 | MS.gene38773:CDS |
| AACTCTTCCTTTGGTAAATA+TGG | 0.175922 | 7.1:-17200035 | MS.gene38773:CDS |
| CTTCCTGAGCTCTTTACTTT+TGG | 0.186295 | 7.1:-17200115 | MS.gene38773:CDS |
| GGCTAGTAGCAGTGCCCTTT+TGG | 0.208653 | 7.1:-17201334 | MS.gene38773:CDS |
| TTGATTTGGCCTAATAATTA+TGG | 0.221104 | 7.1:-17201135 | MS.gene38773:CDS |
| TTAATCTGGAACCTCATTAT+TGG | 0.228299 | 7.1:-17200165 | MS.gene38773:CDS |
| CAAAGGGAGTTCTTCTGTTT+TGG | 0.262942 | 7.1:-17200247 | MS.gene38773:CDS |
| ACCTGGTAACCTGGATTATA+CGG | 0.273829 | 7.1:+17200793 | None:intergenic |
| GTTGCTAGATTGAAACATTT+GGG | 0.276782 | 7.1:-17200538 | MS.gene38773:CDS |
| GGCCTAATAATTATGGTGTT+TGG | 0.289738 | 7.1:-17201128 | MS.gene38773:CDS |
| GCCTAATAATTATGGTGTTT+GGG | 0.302972 | 7.1:-17201127 | MS.gene38773:CDS |
| CAAAACCATGTAGTTAGATT+TGG | 0.307965 | 7.1:-17201381 | MS.gene38773:CDS |
| TATCGACGATAAAACGAAAA+AGG | 0.308321 | 7.1:-17201037 | MS.gene38773:CDS |
| ATTACAAATCAACATCGATT+TGG | 0.316914 | 7.1:+17200891 | None:intergenic |
| AATGCTATTGTTCAGTATCT+TGG | 0.317451 | 7.1:-17200346 | MS.gene38773:CDS |
| TCATCCTTCAACCGGGTATA+TGG | 0.323006 | 7.1:-17200404 | MS.gene38773:CDS |
| GGTTGCTAGATTGAAACATT+TGG | 0.327781 | 7.1:-17200539 | MS.gene38773:CDS |
| ACGAAGTATCTGCACGAGTA+TGG | 0.331576 | 7.1:-17200300 | MS.gene38773:CDS |
| ACCTCTCTTGTAGCGCGCCC+TGG | 0.332447 | 7.1:-17200592 | MS.gene38773:CDS |
| TACATCTAGGCTAGAGATAA+TGG | 0.342117 | 7.1:-17200065 | MS.gene38773:CDS |
| GGCCAAATCAATCTAGGGTT+TGG | 0.347108 | 7.1:+17201147 | None:intergenic |
| ATCCAAACCCTAGATTGATT+TGG | 0.351762 | 7.1:-17201149 | MS.gene38773:CDS |
| ACAACTCTTTGAGGGAGAAC+TGG | 0.355370 | 7.1:+17200454 | None:intergenic |
| GACCTTATGGTAGGGTTAAT+AGG | 0.359349 | 7.1:-17201005 | MS.gene38773:CDS |
| TAATGATGGTGTCACGGTTC+AGG | 0.360237 | 7.1:-17200872 | MS.gene38773:CDS |
| TTATTAGGCCAAATCAATCT+AGG | 0.360667 | 7.1:+17201141 | None:intergenic |
| ACTGTTGTTCTTGATGCTAC+TGG | 0.365790 | 7.1:-17200847 | MS.gene38773:CDS |
| TTGTAGCGCGCCCTGGGTTA+CGG | 0.374753 | 7.1:-17200585 | MS.gene38773:CDS |
| CTTATGCTTCAAATACATCT+AGG | 0.377469 | 7.1:-17200078 | MS.gene38773:CDS |
| CAGTATCTTGGTTCTGATAG+AGG | 0.380205 | 7.1:-17200334 | MS.gene38773:CDS |
| AAGGATCTTGATAGACCTTA+TGG | 0.380637 | 7.1:-17201018 | MS.gene38773:CDS |
| CACGAGTATGGAAAGACTTA+TGG | 0.395545 | 7.1:-17200288 | MS.gene38773:CDS |
| AAATATCTTGGTTGACGAAA+AGG | 0.397851 | 7.1:+17200624 | None:intergenic |
| CAACAATAGGAGCTGCAGCC+AGG | 0.404217 | 7.1:+17200371 | None:intergenic |
| GGTTTCTTCGAGAAATATCT+TGG | 0.410625 | 7.1:+17200612 | None:intergenic |
| GTTCTCCCTCAAAGAGTTGT+TGG | 0.414753 | 7.1:-17200451 | MS.gene38773:CDS |
| CTTTGTCGTCTCCTTTCGAT+TGG | 0.416445 | 7.1:+17200265 | None:intergenic |
| GGGATGGTTCATCCTTCAAC+CGG | 0.418923 | 7.1:-17200412 | MS.gene38773:CDS |
| GGCTAAGGGAACTCTTCCTT+TGG | 0.432543 | 7.1:-17200044 | MS.gene38773:CDS |
| CTGCTACTAGCCCTCAAAAC+TGG | 0.436438 | 7.1:+17201345 | None:intergenic |
| CCGTACGCAACCTGGTAACC+TGG | 0.438830 | 7.1:+17200784 | None:intergenic |
| GCACAGCAGGTTTCTGAAGC+AGG | 0.442231 | 7.1:-17201192 | MS.gene38773:CDS |
| CCTTTGTATGATTCAACAAA+GGG | 0.447977 | 7.1:-17201267 | MS.gene38773:CDS |
| ACCCAAACACCATAATTATT+AGG | 0.454783 | 7.1:+17201126 | None:intergenic |
| TCACCAAGCTAAGGTTATCA+AGG | 0.457559 | 7.1:-17200929 | MS.gene38773:CDS |
| CTACAAAAGTGTATATCAAA+TGG | 0.464823 | 7.1:-17200961 | MS.gene38773:CDS |
| TGTCTTGATAAAACTTGGTC+TGG | 0.467892 | 7.1:-17201072 | MS.gene38773:CDS |
| CGATTCCAACAACTCTTTGA+GGG | 0.468397 | 7.1:+17200446 | None:intergenic |
| TTCAGGAACAAGCTCCAAAA+GGG | 0.479630 | 7.1:+17201320 | None:intergenic |
| GCTTGTTCCTGAATTTAAGA+AGG | 0.481179 | 7.1:-17201310 | MS.gene38773:CDS |
| TATTAGGCCAAATCAATCTA+GGG | 0.485733 | 7.1:+17201142 | None:intergenic |
| ACAATAGCATTGGCAACAAT+AGG | 0.487784 | 7.1:+17200358 | None:intergenic |
| CCGATTCCAACAACTCTTTG+AGG | 0.487934 | 7.1:+17200445 | None:intergenic |
| AGGACTTGCTGTAGCACAGC+AGG | 0.488225 | 7.1:-17201205 | MS.gene38773:CDS |
| ATTCAGGAACAAGCTCCAAA+AGG | 0.489531 | 7.1:+17201319 | None:intergenic |
| GTTGGAATCGGTGGTACGGC+CGG | 0.490658 | 7.1:-17200433 | MS.gene38773:CDS |
| GTTGTGGATCTTGTAGTTGT+GGG | 0.493356 | 7.1:-17201240 | MS.gene38773:CDS |
| AGTCCAAAAGTAAAGAGCTC+AGG | 0.499530 | 7.1:+17200112 | None:intergenic |
| CCTCTCTTGTAGCGCGCCCT+GGG | 0.500520 | 7.1:-17200591 | MS.gene38773:CDS |
| CCAAAATCCCGTACGCAACC+TGG | 0.500737 | 7.1:+17200776 | None:intergenic |
| TGTTGTGGATCTTGTAGTTG+TGG | 0.501438 | 7.1:-17201241 | MS.gene38773:CDS |
| CCTCAAAGAGTTGTTGGAAT+CGG | 0.502055 | 7.1:-17200445 | MS.gene38773:CDS |
| CAACTCTTTGAGGGAGAACT+GGG | 0.503567 | 7.1:+17200455 | None:intergenic |
| CTGGAACCTCATTATTGGCA+TGG | 0.504246 | 7.1:-17200160 | MS.gene38773:CDS |
| GTTGTGGGAGGTGGTCCTGC+AGG | 0.504615 | 7.1:-17201225 | MS.gene38773:CDS |
| TTGATTGTCTTGATAAAACT+TGG | 0.506662 | 7.1:-17201077 | MS.gene38773:CDS |
| CCAGGTTACCAGGTTGCGTA+CGG | 0.508464 | 7.1:-17200784 | MS.gene38773:CDS |
| GTTACGGATGGATGATATAC+AGG | 0.509278 | 7.1:-17200569 | MS.gene38773:CDS |
| TGTGCTACAGCAAGTCCTGC+AGG | 0.512197 | 7.1:+17201210 | None:intergenic |
| AATATCTTGGTTGACGAAAA+GGG | 0.512687 | 7.1:+17200625 | None:intergenic |
| TTACTCAAGCTTGATTTACC+TGG | 0.516361 | 7.1:-17200214 | MS.gene38773:CDS |
| TTGGAATCGGTGGTACGGCC+GGG | 0.517262 | 7.1:-17200432 | MS.gene38773:CDS |
| AATCGGTGGTACGGCCGGGA+TGG | 0.522217 | 7.1:-17200428 | MS.gene38773:CDS |
| GGTGGATGAGTTTGAAGCAA+TGG | 0.522351 | 7.1:-17201106 | MS.gene38773:CDS |
| GCTACCATATACCCGGTTGA+AGG | 0.522990 | 7.1:+17200400 | None:intergenic |
| AACTGGGAGAGGGCCACCCA+TGG | 0.523115 | 7.1:+17200471 | None:intergenic |
| TAACCTTGATAACCTTAGCT+TGG | 0.525371 | 7.1:+17200926 | None:intergenic |
| TATGATAAACCGTATAATCC+AGG | 0.525824 | 7.1:-17200802 | MS.gene38773:CDS |
| TAGGCTAGAGATAATGGCTA+AGG | 0.528892 | 7.1:-17200059 | MS.gene38773:CDS |
| ACCGTATAATCCAGGTTACC+AGG | 0.534646 | 7.1:-17200794 | MS.gene38773:CDS |
| TTCCTATTAACCCTACCATA+AGG | 0.535197 | 7.1:+17201003 | None:intergenic |
| TCGATGTTGATTTGTAATGA+TGG | 0.536957 | 7.1:-17200886 | MS.gene38773:CDS |
| AACAATAGGAGCTGCAGCCA+GGG | 0.539187 | 7.1:+17200372 | None:intergenic |
| TCCTTTGTATGATTCAACAA+AGG | 0.542488 | 7.1:-17201268 | MS.gene38773:CDS |
| GGCATTGCATACAGAAATGT+AGG | 0.542673 | 7.1:+17200646 | None:intergenic |
| CAGGTTACCAGGTTGCGTAC+GGG | 0.549357 | 7.1:-17200783 | MS.gene38773:CDS |
| TTGAACCAAATCTAACTACA+TGG | 0.551102 | 7.1:+17201376 | None:intergenic |
| CACAGCAGGTTTCTGAAGCA+GGG | 0.552691 | 7.1:-17201191 | MS.gene38773:CDS |
| TGTTAAGTTTCACCAAGCTA+AGG | 0.556343 | 7.1:-17200938 | MS.gene38773:CDS |
| TTTCTGAATAACCATGAAGT+GGG | 0.559455 | 7.1:+17201436 | None:intergenic |
| AGCGCGCCCTGGGTTACGGA+TGG | 0.560047 | 7.1:-17200581 | MS.gene38773:CDS |
| CCCAGGGCGCGCTACAAGAG+AGG | 0.566724 | 7.1:+17200591 | None:intergenic |
| ATCTTGATAGACCTTATGGT+AGG | 0.567507 | 7.1:-17201014 | MS.gene38773:CDS |
| AAGATACTGAACAATAGCAT+TGG | 0.568718 | 7.1:+17200348 | None:intergenic |
| GATCTTGTAGTTGTGGGAGG+TGG | 0.570389 | 7.1:-17201234 | MS.gene38773:CDS |
| GGATGATATACAGGACAGAA+TGG | 0.571665 | 7.1:-17200560 | MS.gene38773:CDS |
| AGTTGTTGGAATCGGTGGTA+CGG | 0.572774 | 7.1:-17200437 | MS.gene38773:CDS |
| TTCAACAAAGGGTACTGTTG+TGG | 0.576003 | 7.1:-17201256 | MS.gene38773:CDS |
| CTTTGAGGGAGAACTGGGAG+AGG | 0.576024 | 7.1:+17200460 | None:intergenic |
| CAAAGAGTTGTTGGAATCGG+TGG | 0.576079 | 7.1:-17200442 | MS.gene38773:CDS |
| ATATCATCCATCCGTAACCC+AGG | 0.576251 | 7.1:+17200574 | None:intergenic |
| TCTTGATAGACCTTATGGTA+GGG | 0.578329 | 7.1:-17201013 | MS.gene38773:CDS |
| AAGACTTATGGCCAATCGAA+AGG | 0.581415 | 7.1:-17200276 | MS.gene38773:CDS |
| AAGAATCCATGCCAATAATG+AGG | 0.582281 | 7.1:+17200154 | None:intergenic |
| AGACAATGACTTGAAGCTCA+AGG | 0.587643 | 7.1:-17200686 | MS.gene38773:CDS |
| GTGGATCTTGTAGTTGTGGG+AGG | 0.592588 | 7.1:-17201237 | MS.gene38773:CDS |
| AGGCTAGAGATAATGGCTAA+GGG | 0.600987 | 7.1:-17200058 | MS.gene38773:CDS |
| GGTTATCAAGGTTATTCATG+AGG | 0.602378 | 7.1:-17200917 | MS.gene38773:CDS |
| ACTGGGAGAGGGCCACCCAT+GGG | 0.604348 | 7.1:+17200472 | None:intergenic |
| AGCTTGATTTACCTGGCACA+AGG | 0.608514 | 7.1:-17200207 | MS.gene38773:CDS |
| AATCGAAAGGAGACGACAAA+GGG | 0.608687 | 7.1:-17200263 | MS.gene38773:CDS |
| CAGTGTGTGATTCCCATGGG+TGG | 0.609612 | 7.1:-17200484 | MS.gene38773:CDS |
| CAATCGAAAGGAGACGACAA+AGG | 0.611686 | 7.1:-17200264 | MS.gene38773:CDS |
| TAATAATTATGGTGTTTGGG+TGG | 0.615233 | 7.1:-17201124 | MS.gene38773:CDS |
| CCCTTTGTTGAATCATACAA+AGG | 0.619356 | 7.1:+17201267 | None:intergenic |
| GATTTGTAATGATGGTGTCA+CGG | 0.623004 | 7.1:-17200878 | MS.gene38773:CDS |
| GGTTCTTGCTACCATATACC+CGG | 0.623735 | 7.1:+17200393 | None:intergenic |
| TTGCTAGATTGAAACATTTG+GGG | 0.623824 | 7.1:-17200537 | MS.gene38773:CDS |
| TTTGAGGGAGAACTGGGAGA+GGG | 0.636661 | 7.1:+17200461 | None:intergenic |
| TGAGCAGTGTGTGATTCCCA+TGG | 0.639377 | 7.1:-17200488 | MS.gene38773:CDS |
| TATCATCCATCCGTAACCCA+GGG | 0.650423 | 7.1:+17200575 | None:intergenic |
| TTGTTGACCATATTTACCAA+AGG | 0.650614 | 7.1:+17200028 | None:intergenic |
| GGATGGTTCATCCTTCAACC+GGG | 0.651204 | 7.1:-17200411 | MS.gene38773:CDS |
| GGTTGAAGGATGAACCATCC+CGG | 0.653246 | 7.1:+17200414 | None:intergenic |
| GAGCAGTGTGTGATTCCCAT+GGG | 0.674056 | 7.1:-17200487 | MS.gene38773:CDS |
| GTATATGGTAGCAAGAACCC+TGG | 0.685651 | 7.1:-17200389 | MS.gene38773:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAATTTAAGAAGGAAAATT+TGG | - | chr7.1:17200185-17200204 | MS.gene38773:CDS | 20.0% |
| !!! | AAATTTTCCTTCTTAAATTC+AGG | + | chr7.1:17200186-17200205 | None:intergenic | 20.0% |
| !!! | TGTTGATAAAATGCTTTTTA+TGG | - | chr7.1:17200758-17200777 | MS.gene38773:CDS | 20.0% |
| ! | TTGATTGTCTTGATAAAACT+TGG | - | chr7.1:17200409-17200428 | MS.gene38773:CDS | 25.0% |
| !! | AGCATTTTATCAACATCAAA+AGG | + | chr7.1:17200753-17200772 | None:intergenic | 25.0% |
| !! | ATTACAAATCAACATCGATT+TGG | + | chr7.1:17200598-17200617 | None:intergenic | 25.0% |
| !! | CTACAAAAGTGTATATCAAA+TGG | - | chr7.1:17200525-17200544 | MS.gene38773:CDS | 25.0% |
| !! | GCATTTTATCAACATCAAAA+GGG | + | chr7.1:17200752-17200771 | None:intergenic | 25.0% |
| !!! | AAAGAAAAAACCAGTTTTGA+GGG | - | chr7.1:17200131-17200150 | MS.gene38773:CDS | 25.0% |
| !!! | ATAAAATGCTTTTTATGGAC+TGG | - | chr7.1:17200763-17200782 | MS.gene38773:CDS | 25.0% |
| !!! | TTGATTTGGCCTAATAATTA+TGG | - | chr7.1:17200351-17200370 | MS.gene38773:CDS | 25.0% |
| !!! | TTTCGATGCATTTTTTAATC+TGG | - | chr7.1:17201307-17201326 | MS.gene38773:CDS | 25.0% |
| AAATATCTTGGTTGACGAAA+AGG | + | chr7.1:17200865-17200884 | None:intergenic | 30.0% | |
| AACTCTTCCTTTGGTAAATA+TGG | - | chr7.1:17201451-17201470 | MS.gene38773:CDS | 30.0% | |
| AAGATACTGAACAATAGCAT+TGG | + | chr7.1:17201141-17201160 | None:intergenic | 30.0% | |
| AATATCTTGGTTGACGAAAA+GGG | + | chr7.1:17200864-17200883 | None:intergenic | 30.0% | |
| AATGCTATTGTTCAGTATCT+TGG | - | chr7.1:17201140-17201159 | MS.gene38773:CDS | 30.0% | |
| ACCCAAACACCATAATTATT+AGG | + | chr7.1:17200363-17200382 | None:intergenic | 30.0% | |
| CAAAACCATGTAGTTAGATT+TGG | - | chr7.1:17200105-17200124 | MS.gene38773:CDS | 30.0% | |
| CCTTTGTATGATTCAACAAA+GGG | - | chr7.1:17200219-17200238 | MS.gene38773:CDS | 30.0% | |
| CTTATGCTTCAAATACATCT+AGG | - | chr7.1:17201408-17201427 | MS.gene38773:CDS | 30.0% | |
| GCCTAATAATTATGGTGTTT+GGG | - | chr7.1:17200359-17200378 | MS.gene38773:CDS | 30.0% | |
| GTTGCTAGATTGAAACATTT+GGG | - | chr7.1:17200948-17200967 | MS.gene38773:CDS | 30.0% | |
| TAATAATTATGGTGTTTGGG+TGG | - | chr7.1:17200362-17200381 | MS.gene38773:CDS | 30.0% | |
| TATCGACGATAAAACGAAAA+AGG | - | chr7.1:17200449-17200468 | MS.gene38773:CDS | 30.0% | |
| TATGATAAACCGTATAATCC+AGG | - | chr7.1:17200684-17200703 | MS.gene38773:CDS | 30.0% | |
| TATTAGGCCAAATCAATCTA+GGG | + | chr7.1:17200347-17200366 | None:intergenic | 30.0% | |
| TCCTTTGTATGATTCAACAA+AGG | - | chr7.1:17200218-17200237 | MS.gene38773:CDS | 30.0% | |
| TTATTAGGCCAAATCAATCT+AGG | + | chr7.1:17200348-17200367 | None:intergenic | 30.0% | |
| TTGAACCAAATCTAACTACA+TGG | + | chr7.1:17200113-17200132 | None:intergenic | 30.0% | |
| TTGCTAGATTGAAACATTTG+GGG | - | chr7.1:17200949-17200968 | MS.gene38773:CDS | 30.0% | |
| TTGTTGACCATATTTACCAA+AGG | + | chr7.1:17201461-17201480 | None:intergenic | 30.0% | |
| TTTCTGAATAACCATGAAGT+GGG | + | chr7.1:17200053-17200072 | None:intergenic | 30.0% | |
| ! | CAAAGAAAAAACCAGTTTTG+AGG | - | chr7.1:17200130-17200149 | MS.gene38773:CDS | 30.0% |
| ! | TGCAAAAATTGAAGCTTGTT+TGG | + | chr7.1:17200030-17200049 | None:intergenic | 30.0% |
| ! | TTAATCTGGAACCTCATTAT+TGG | - | chr7.1:17201321-17201340 | MS.gene38773:CDS | 30.0% |
| ! | TTTTCTGAATAACCATGAAG+TGG | + | chr7.1:17200054-17200073 | None:intergenic | 30.0% |
| !! | TCGATGTTGATTTGTAATGA+TGG | - | chr7.1:17200600-17200619 | MS.gene38773:CDS | 30.0% |
| AAGAATCCATGCCAATAATG+AGG | + | chr7.1:17201335-17201354 | None:intergenic | 35.0% | |
| AAGGATCTTGATAGACCTTA+TGG | - | chr7.1:17200468-17200487 | MS.gene38773:CDS | 35.0% | |
| ATCCAAACCCTAGATTGATT+TGG | - | chr7.1:17200337-17200356 | MS.gene38773:CDS | 35.0% | |
| ATCTTGATAGACCTTATGGT+AGG | - | chr7.1:17200472-17200491 | MS.gene38773:CDS | 35.0% | |
| CCCTTTGTTGAATCATACAA+AGG | + | chr7.1:17200222-17200241 | None:intergenic | 35.0% | |
| GCTTGTTCCTGAATTTAAGA+AGG | - | chr7.1:17200176-17200195 | MS.gene38773:CDS | 35.0% | |
| GGCCTAATAATTATGGTGTT+TGG | - | chr7.1:17200358-17200377 | MS.gene38773:CDS | 35.0% | |
| GGTTATCAAGGTTATTCATG+AGG | - | chr7.1:17200569-17200588 | MS.gene38773:CDS | 35.0% | |
| GGTTGCTAGATTGAAACATT+TGG | - | chr7.1:17200947-17200966 | MS.gene38773:CDS | 35.0% | |
| GGTTTCTTCGAGAAATATCT+TGG | + | chr7.1:17200877-17200896 | None:intergenic | 35.0% | |
| TACATCTAGGCTAGAGATAA+TGG | - | chr7.1:17201421-17201440 | MS.gene38773:CDS | 35.0% | |
| TCTTGATAGACCTTATGGTA+GGG | - | chr7.1:17200473-17200492 | MS.gene38773:CDS | 35.0% | |
| TGTCTTGATAAAACTTGGTC+TGG | - | chr7.1:17200414-17200433 | MS.gene38773:CDS | 35.0% | |
| TGTTAAGTTTCACCAAGCTA+AGG | - | chr7.1:17200548-17200567 | MS.gene38773:CDS | 35.0% | |
| TTACTCAAGCTTGATTTACC+TGG | - | chr7.1:17201272-17201291 | MS.gene38773:CDS | 35.0% | |
| TTCCTATTAACCCTACCATA+AGG | + | chr7.1:17200486-17200505 | None:intergenic | 35.0% | |
| ! | GATTTGTAATGATGGTGTCA+CGG | - | chr7.1:17200608-17200627 | MS.gene38773:CDS | 35.0% |
| ! | TAACCTTGATAACCTTAGCT+TGG | + | chr7.1:17200563-17200582 | None:intergenic | 35.0% |
| !! | ACAATAGCATTGGCAACAAT+AGG | + | chr7.1:17201131-17201150 | None:intergenic | 35.0% |
| AAGACTTATGGCCAATCGAA+AGG | - | chr7.1:17201210-17201229 | MS.gene38773:CDS | 40.0% | |
| AATCGAAAGGAGACGACAAA+GGG | - | chr7.1:17201223-17201242 | MS.gene38773:CDS | 40.0% | |
| ACCTGGTAACCTGGATTATA+CGG | + | chr7.1:17200696-17200715 | None:intergenic | 40.0% | |
| ACTGTTGTTCTTGATGCTAC+TGG | - | chr7.1:17200639-17200658 | MS.gene38773:CDS | 40.0% | |
| AGACAATGACTTGAAGCTCA+AGG | - | chr7.1:17200800-17200819 | MS.gene38773:CDS | 40.0% | |
| AGTCCAAAAGTAAAGAGCTC+AGG | + | chr7.1:17201377-17201396 | None:intergenic | 40.0% | |
| ATTCAGGAACAAGCTCCAAA+AGG | + | chr7.1:17200170-17200189 | None:intergenic | 40.0% | |
| CACGAGTATGGAAAGACTTA+TGG | - | chr7.1:17201198-17201217 | MS.gene38773:CDS | 40.0% | |
| CCTCAAAGAGTTGTTGGAAT+CGG | - | chr7.1:17201041-17201060 | MS.gene38773:CDS | 40.0% | |
| CGATTCCAACAACTCTTTGA+GGG | + | chr7.1:17201043-17201062 | None:intergenic | 40.0% | |
| GACCTTATGGTAGGGTTAAT+AGG | - | chr7.1:17200481-17200500 | MS.gene38773:CDS | 40.0% | |
| GGATGATATACAGGACAGAA+TGG | - | chr7.1:17200926-17200945 | MS.gene38773:CDS | 40.0% | |
| GGCATTGCATACAGAAATGT+AGG | + | chr7.1:17200843-17200862 | None:intergenic | 40.0% | |
| GTTACGGATGGATGATATAC+AGG | - | chr7.1:17200917-17200936 | MS.gene38773:CDS | 40.0% | |
| GTTGTGGATCTTGTAGTTGT+GGG | - | chr7.1:17200246-17200265 | MS.gene38773:CDS | 40.0% | |
| TCACCAAGCTAAGGTTATCA+AGG | - | chr7.1:17200557-17200576 | MS.gene38773:CDS | 40.0% | |
| TGTTGTGGATCTTGTAGTTG+TGG | - | chr7.1:17200245-17200264 | MS.gene38773:CDS | 40.0% | |
| TTCAGGAACAAGCTCCAAAA+GGG | + | chr7.1:17200169-17200188 | None:intergenic | 40.0% | |
| ! | AGGCTAGAGATAATGGCTAA+GGG | - | chr7.1:17201428-17201447 | MS.gene38773:CDS | 40.0% |
| ! | CAAAGGGAGTTCTTCTGTTT+TGG | - | chr7.1:17201239-17201258 | MS.gene38773:CDS | 40.0% |
| ! | CAATTTTTGCACCCACTTCA+TGG | - | chr7.1:17200039-17200058 | MS.gene38773:CDS | 40.0% |
| ! | CTTCCTGAGCTCTTTACTTT+TGG | - | chr7.1:17201371-17201390 | MS.gene38773:CDS | 40.0% |
| ! | TAGGCTAGAGATAATGGCTA+AGG | - | chr7.1:17201427-17201446 | MS.gene38773:CDS | 40.0% |
| !! | CAGTATCTTGGTTCTGATAG+AGG | - | chr7.1:17201152-17201171 | MS.gene38773:CDS | 40.0% |
| !! | GGTTCTGATAGAGGTCTTTT+AGG | - | chr7.1:17201161-17201180 | MS.gene38773:CDS | 40.0% |
| !! | TTCAACAAAGGGTACTGTTG+TGG | - | chr7.1:17200230-17200249 | MS.gene38773:CDS | 40.0% |
| !!! | GGAGTTCTTCTGTTTTGGTA+TGG | - | chr7.1:17201244-17201263 | MS.gene38773:CDS | 40.0% |
| ACCGTATAATCCAGGTTACC+AGG | - | chr7.1:17200692-17200711 | MS.gene38773:CDS | 45.0% | |
| AGCTTGATTTACCTGGCACA+AGG | - | chr7.1:17201279-17201298 | MS.gene38773:CDS | 45.0% | |
| AGTTGTTGGAATCGGTGGTA+CGG | - | chr7.1:17201049-17201068 | MS.gene38773:CDS | 45.0% | |
| ATATCATCCATCCGTAACCC+AGG | + | chr7.1:17200915-17200934 | None:intergenic | 45.0% | |
| CAAAGAGTTGTTGGAATCGG+TGG | - | chr7.1:17201044-17201063 | MS.gene38773:CDS | 45.0% | |
| CAATCGAAAGGAGACGACAA+AGG | - | chr7.1:17201222-17201241 | MS.gene38773:CDS | 45.0% | |
| CCGATTCCAACAACTCTTTG+AGG | + | chr7.1:17201044-17201063 | None:intergenic | 45.0% | |
| CTGGAACCTCATTATTGGCA+TGG | - | chr7.1:17201326-17201345 | MS.gene38773:CDS | 45.0% | |
| CTTTGTCGTCTCCTTTCGAT+TGG | + | chr7.1:17201224-17201243 | None:intergenic | 45.0% | |
| GGTTCTTGCTACCATATACC+CGG | + | chr7.1:17201096-17201115 | None:intergenic | 45.0% | |
| GTATATGGTAGCAAGAACCC+TGG | - | chr7.1:17201097-17201116 | MS.gene38773:CDS | 45.0% | |
| GTTCTCCCTCAAAGAGTTGT+TGG | - | chr7.1:17201035-17201054 | MS.gene38773:CDS | 45.0% | |
| TATCATCCATCCGTAACCCA+GGG | + | chr7.1:17200914-17200933 | None:intergenic | 45.0% | |
| TCATCCTTCAACCGGGTATA+TGG | - | chr7.1:17201082-17201101 | MS.gene38773:CDS | 45.0% | |
| TCGAAAAATCTCCTTGTGCC+AGG | + | chr7.1:17201293-17201312 | None:intergenic | 45.0% | |
| ! | ACAACTCTTTGAGGGAGAAC+TGG | + | chr7.1:17201035-17201054 | None:intergenic | 45.0% |
| ! | ACGAAGTATCTGCACGAGTA+TGG | - | chr7.1:17201186-17201205 | MS.gene38773:CDS | 45.0% |
| ! | CAACTCTTTGAGGGAGAACT+GGG | + | chr7.1:17201034-17201053 | None:intergenic | 45.0% |
| ! | GGCCAAATCAATCTAGGGTT+TGG | + | chr7.1:17200342-17200361 | None:intergenic | 45.0% |
| ! | GGTGGATGAGTTTGAAGCAA+TGG | - | chr7.1:17200380-17200399 | MS.gene38773:CDS | 45.0% |
| !! | TAATGATGGTGTCACGGTTC+AGG | - | chr7.1:17200614-17200633 | MS.gene38773:CDS | 45.0% |
| AACAATAGGAGCTGCAGCCA+GGG | + | chr7.1:17201117-17201136 | None:intergenic | 50.0% | |
| CTGCTACTAGCCCTCAAAAC+TGG | + | chr7.1:17200144-17200163 | None:intergenic | 50.0% | |
| GAGCAGTGTGTGATTCCCAT+GGG | - | chr7.1:17200999-17201018 | MS.gene38773:CDS | 50.0% | |
| GATCTTGTAGTTGTGGGAGG+TGG | - | chr7.1:17200252-17200271 | MS.gene38773:CDS | 50.0% | |
| GCTACCATATACCCGGTTGA+AGG | + | chr7.1:17201089-17201108 | None:intergenic | 50.0% | |
| GGATGGTTCATCCTTCAACC+GGG | - | chr7.1:17201075-17201094 | MS.gene38773:CDS | 50.0% | |
| GGCTAAGGGAACTCTTCCTT+TGG | - | chr7.1:17201442-17201461 | MS.gene38773:CDS | 50.0% | |
| GGGATGGTTCATCCTTCAAC+CGG | - | chr7.1:17201074-17201093 | MS.gene38773:CDS | 50.0% | |
| GGTTGAAGGATGAACCATCC+CGG | + | chr7.1:17201075-17201094 | None:intergenic | 50.0% | |
| GTGGATCTTGTAGTTGTGGG+AGG | - | chr7.1:17200249-17200268 | MS.gene38773:CDS | 50.0% | |
| TGAGCAGTGTGTGATTCCCA+TGG | - | chr7.1:17200998-17201017 | MS.gene38773:CDS | 50.0% | |
| TTTGAGGGAGAACTGGGAGA+GGG | + | chr7.1:17201028-17201047 | None:intergenic | 50.0% | |
| !! | CACAGCAGGTTTCTGAAGCA+GGG | - | chr7.1:17200295-17200314 | MS.gene38773:CDS | 50.0% |
| CAACAATAGGAGCTGCAGCC+AGG | + | chr7.1:17201118-17201137 | None:intergenic | 55.0% | |
| CAGGTTACCAGGTTGCGTAC+GGG | - | chr7.1:17200703-17200722 | MS.gene38773:CDS | 55.0% | |
| CAGTGTGTGATTCCCATGGG+TGG | - | chr7.1:17201002-17201021 | MS.gene38773:CDS | 55.0% | |
| CCAAAATCCCGTACGCAACC+TGG | + | chr7.1:17200713-17200732 | None:intergenic | 55.0% | |
| CCAGGTTACCAGGTTGCGTA+CGG | - | chr7.1:17200702-17200721 | MS.gene38773:CDS | 55.0% | |
| TGTGCTACAGCAAGTCCTGC+AGG | + | chr7.1:17200279-17200298 | None:intergenic | 55.0% | |
| ! | CCAGGTTGCGTACGGGATTT+TGG | - | chr7.1:17200710-17200729 | MS.gene38773:CDS | 55.0% |
| ! | CTTTGAGGGAGAACTGGGAG+AGG | + | chr7.1:17201029-17201048 | None:intergenic | 55.0% |
| ! | GGCTAGTAGCAGTGCCCTTT+TGG | - | chr7.1:17200152-17200171 | MS.gene38773:CDS | 55.0% |
| !! | AGGACTTGCTGTAGCACAGC+AGG | - | chr7.1:17200281-17200300 | MS.gene38773:CDS | 55.0% |
| !! | GCACAGCAGGTTTCTGAAGC+AGG | - | chr7.1:17200294-17200313 | MS.gene38773:CDS | 55.0% |
| !!! | TGCGTACGGGATTTTGGCTG+AGG | - | chr7.1:17200716-17200735 | MS.gene38773:CDS | 55.0% |
| CCGTACGCAACCTGGTAACC+TGG | + | chr7.1:17200705-17200724 | None:intergenic | 60.0% | |
| GTTGGAATCGGTGGTACGGC+CGG | - | chr7.1:17201053-17201072 | MS.gene38773:CDS | 60.0% | |
| TTGGAATCGGTGGTACGGCC+GGG | - | chr7.1:17201054-17201073 | MS.gene38773:CDS | 60.0% | |
| TTGTAGCGCGCCCTGGGTTA+CGG | - | chr7.1:17200901-17200920 | MS.gene38773:CDS | 60.0% | |
| AACTGGGAGAGGGCCACCCA+TGG | + | chr7.1:17201018-17201037 | None:intergenic | 65.0% | |
| AATCGGTGGTACGGCCGGGA+TGG | - | chr7.1:17201058-17201077 | MS.gene38773:CDS | 65.0% | |
| ACCTCTCTTGTAGCGCGCCC+TGG | - | chr7.1:17200894-17200913 | MS.gene38773:CDS | 65.0% | |
| ACTGGGAGAGGGCCACCCAT+GGG | + | chr7.1:17201017-17201036 | None:intergenic | 65.0% | |
| CCTCTCTTGTAGCGCGCCCT+GGG | - | chr7.1:17200895-17200914 | MS.gene38773:CDS | 65.0% | |
| GTTGTGGGAGGTGGTCCTGC+AGG | - | chr7.1:17200261-17200280 | MS.gene38773:CDS | 65.0% | |
| AGCGCGCCCTGGGTTACGGA+TGG | - | chr7.1:17200905-17200924 | MS.gene38773:CDS | 70.0% | |
| CCCAGGGCGCGCTACAAGAG+AGG | + | chr7.1:17200898-17200917 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 17200006 | 17201502 | 17200006 | ID=MS.gene38773 |
| chr7.1 | mRNA | 17200006 | 17201502 | 17200006 | ID=MS.gene38773.t1;Parent=MS.gene38773 |
| chr7.1 | exon | 17200006 | 17201502 | 17200006 | ID=MS.gene38773.t1.exon1;Parent=MS.gene38773.t1 |
| chr7.1 | CDS | 17200006 | 17201502 | 17200006 | ID=cds.MS.gene38773.t1;Parent=MS.gene38773.t1 |
| Gene Sequence |
| Protein sequence |
