Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42660.t1 | QEX52173.1 | 94.6 | 537 | 2 | 1 | 1 | 510 | 1 | 537 | 2.00E-290 | 1007.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42660.t1 | Q570B4 | 70.6 | 551 | 114 | 4 | 3 | 509 | 4 | 550 | 9.4e-225 | 780.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42660.t1 | A0A5J6NCI0 | 94.6 | 537 | 2 | 1 | 1 | 510 | 1 | 537 | 1.4e-290 | 1007.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene42660 | 0.820298 | 7.38E-53 | -1.69E-46 |
| MS.gene049351 | MS.gene42660 | 0.858691 | 6.92E-63 | -1.69E-46 |
| MS.gene049356 | MS.gene42660 | 0.801231 | 9.93E-49 | -1.69E-46 |
| MS.gene049389 | MS.gene42660 | 0.804971 | 1.67E-49 | -1.69E-46 |
| MS.gene049491 | MS.gene42660 | 0.825834 | 3.78E-54 | -1.69E-46 |
| MS.gene049661 | MS.gene42660 | 0.840281 | 9.56E-58 | -1.69E-46 |
| MS.gene049662 | MS.gene42660 | 0.842028 | 3.32E-58 | -1.69E-46 |
| MS.gene049681 | MS.gene42660 | 0.801674 | 8.06E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene42660 | 0.858996 | 5.61E-63 | -1.69E-46 |
| MS.gene049907 | MS.gene42660 | 0.811848 | 5.70E-51 | -1.69E-46 |
| MS.gene050076 | MS.gene42660 | 0.824078 | 9.81E-54 | -1.69E-46 |
| MS.gene050099 | MS.gene42660 | 0.809577 | 1.77E-50 | -1.69E-46 |
| MS.gene050128 | MS.gene42660 | 0.888286 | 6.76E-73 | -1.69E-46 |
| MS.gene050301 | MS.gene42660 | 0.89815 | 7.03E-77 | -1.69E-46 |
| MS.gene050397 | MS.gene42660 | 0.819278 | 1.26E-52 | -1.69E-46 |
| MS.gene050432 | MS.gene42660 | 0.827315 | 1.67E-54 | -1.69E-46 |
| MS.gene050529 | MS.gene42660 | 0.802063 | 6.70E-49 | -1.69E-46 |
| MS.gene050581 | MS.gene42660 | 0.840503 | 8.36E-58 | -1.69E-46 |
| MS.gene050767 | MS.gene42660 | 0.821791 | 3.35E-53 | -1.69E-46 |
| MS.gene050770 | MS.gene42660 | 0.820436 | 6.87E-53 | -1.69E-46 |
| MS.gene05101 | MS.gene42660 | 0.868787 | 5.04E-66 | -1.69E-46 |
| MS.gene051255 | MS.gene42660 | 0.83032 | 3.14E-55 | -1.69E-46 |
| MS.gene051471 | MS.gene42660 | 0.833125 | 6.38E-56 | -1.69E-46 |
| MS.gene051487 | MS.gene42660 | 0.806097 | 9.71E-50 | -1.69E-46 |
| MS.gene051663 | MS.gene42660 | 0.83056 | 2.74E-55 | -1.69E-46 |
| MS.gene051860 | MS.gene42660 | 0.832881 | 7.34E-56 | -1.69E-46 |
| MS.gene051877 | MS.gene42660 | 0.820187 | 7.83E-53 | -1.69E-46 |
| MS.gene052078 | MS.gene42660 | 0.849443 | 3.22E-60 | -1.69E-46 |
| MS.gene052178 | MS.gene42660 | 0.871326 | 7.44E-67 | -1.69E-46 |
| MS.gene052188 | MS.gene42660 | 0.838052 | 3.62E-57 | -1.69E-46 |
| MS.gene052207 | MS.gene42660 | 0.840673 | 7.54E-58 | -1.69E-46 |
| MS.gene052253 | MS.gene42660 | 0.813855 | 2.07E-51 | -1.69E-46 |
| MS.gene052287 | MS.gene42660 | 0.815339 | 9.72E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene42660 | 0.832038 | 1.19E-55 | -1.69E-46 |
| MS.gene052326 | MS.gene42660 | 0.873969 | 9.73E-68 | -1.69E-46 |
| MS.gene052340 | MS.gene42660 | 0.8417 | 4.05E-58 | -1.69E-46 |
| MS.gene052485 | MS.gene42660 | 0.836832 | 7.42E-57 | -1.69E-46 |
| MS.gene052917 | MS.gene42660 | -0.8018 | 7.59E-49 | -1.69E-46 |
| MS.gene05316 | MS.gene42660 | 0.814384 | 1.58E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene42660 | 0.816118 | 6.52E-52 | -1.69E-46 |
| MS.gene053557 | MS.gene42660 | 0.809431 | 1.90E-50 | -1.69E-46 |
| MS.gene053813 | MS.gene42660 | 0.835335 | 1.78E-56 | -1.69E-46 |
| MS.gene053836 | MS.gene42660 | 0.870122 | 1.85E-66 | -1.69E-46 |
| MS.gene053928 | MS.gene42660 | 0.807186 | 5.72E-50 | -1.69E-46 |
| MS.gene054010 | MS.gene42660 | 0.882799 | 7.69E-71 | -1.69E-46 |
| MS.gene054011 | MS.gene42660 | 0.889223 | 2.94E-73 | -1.69E-46 |
| MS.gene054012 | MS.gene42660 | 0.889596 | 2.10E-73 | -1.69E-46 |
| MS.gene054013 | MS.gene42660 | 0.891164 | 5.10E-74 | -1.69E-46 |
| MS.gene054123 | MS.gene42660 | 0.845105 | 5.00E-59 | -1.69E-46 |
| MS.gene054214 | MS.gene42660 | 0.848016 | 8.02E-60 | -1.69E-46 |
| MS.gene054376 | MS.gene42660 | 0.835102 | 2.04E-56 | -1.69E-46 |
| MS.gene054473 | MS.gene42660 | 0.835778 | 1.38E-56 | -1.69E-46 |
| MS.gene05455 | MS.gene42660 | 0.847669 | 9.99E-60 | -1.69E-46 |
| MS.gene054618 | MS.gene42660 | 0.832405 | 9.63E-56 | -1.69E-46 |
| MS.gene054802 | MS.gene42660 | 0.82465 | 7.19E-54 | -1.69E-46 |
| MS.gene054803 | MS.gene42660 | 0.820108 | 8.17E-53 | -1.69E-46 |
| MS.gene054804 | MS.gene42660 | 0.823878 | 1.09E-53 | -1.69E-46 |
| MS.gene055116 | MS.gene42660 | 0.82303 | 1.73E-53 | -1.69E-46 |
| MS.gene055277 | MS.gene42660 | 0.898668 | 4.23E-77 | -1.69E-46 |
| MS.gene055303 | MS.gene42660 | 0.819271 | 1.27E-52 | -1.69E-46 |
| MS.gene055390 | MS.gene42660 | 0.877722 | 5.00E-69 | -1.69E-46 |
| MS.gene055422 | MS.gene42660 | 0.875884 | 2.17E-68 | -1.69E-46 |
| MS.gene055428 | MS.gene42660 | 0.86732 | 1.49E-65 | -1.69E-46 |
| MS.gene055604 | MS.gene42660 | 0.898076 | 7.56E-77 | -1.69E-46 |
| MS.gene056191 | MS.gene42660 | 0.855816 | 4.89E-62 | -1.69E-46 |
| MS.gene056407 | MS.gene42660 | 0.845508 | 3.89E-59 | -1.69E-46 |
| MS.gene056410 | MS.gene42660 | 0.85792 | 1.17E-62 | -1.69E-46 |
| MS.gene056609 | MS.gene42660 | 0.803701 | 3.07E-49 | -1.69E-46 |
| MS.gene056612 | MS.gene42660 | 0.843673 | 1.21E-58 | -1.69E-46 |
| MS.gene056772 | MS.gene42660 | 0.801322 | 9.51E-49 | -1.69E-46 |
| MS.gene056902 | MS.gene42660 | 0.89115 | 5.16E-74 | -1.69E-46 |
| MS.gene056931 | MS.gene42660 | 0.884541 | 1.76E-71 | -1.69E-46 |
| MS.gene056933 | MS.gene42660 | 0.88607 | 4.71E-72 | -1.69E-46 |
| MS.gene056935 | MS.gene42660 | 0.871908 | 4.77E-67 | -1.69E-46 |
| MS.gene056942 | MS.gene42660 | 0.80897 | 2.38E-50 | -1.69E-46 |
| MS.gene05702 | MS.gene42660 | 0.828726 | 7.66E-55 | -1.69E-46 |
| MS.gene057121 | MS.gene42660 | 0.81769 | 2.89E-52 | -1.69E-46 |
| MS.gene057245 | MS.gene42660 | 0.828005 | 1.14E-54 | -1.69E-46 |
| MS.gene057295 | MS.gene42660 | 0.81026 | 1.26E-50 | -1.69E-46 |
| MS.gene05733 | MS.gene42660 | 0.81525 | 1.02E-51 | -1.69E-46 |
| MS.gene057439 | MS.gene42660 | 0.81608 | 6.65E-52 | -1.69E-46 |
| MS.gene057448 | MS.gene42660 | 0.839288 | 1.73E-57 | -1.69E-46 |
| MS.gene057449 | MS.gene42660 | 0.836665 | 8.19E-57 | -1.69E-46 |
| MS.gene057450 | MS.gene42660 | 0.849221 | 3.72E-60 | -1.69E-46 |
| MS.gene057469 | MS.gene42660 | 0.836222 | 1.06E-56 | -1.69E-46 |
| MS.gene057749 | MS.gene42660 | 0.80991 | 1.50E-50 | -1.69E-46 |
| MS.gene057752 | MS.gene42660 | 0.802354 | 5.84E-49 | -1.69E-46 |
| MS.gene057779 | MS.gene42660 | 0.827293 | 1.69E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene42660 | 0.808352 | 3.23E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene42660 | 0.853833 | 1.84E-61 | -1.69E-46 |
| MS.gene058082 | MS.gene42660 | 0.808732 | 2.68E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene42660 | 0.870938 | 9.99E-67 | -1.69E-46 |
| MS.gene058293 | MS.gene42660 | 0.844385 | 7.81E-59 | -1.69E-46 |
| MS.gene058365 | MS.gene42660 | 0.816967 | 4.21E-52 | -1.69E-46 |
| MS.gene05842 | MS.gene42660 | 0.824737 | 6.86E-54 | -1.69E-46 |
| MS.gene058484 | MS.gene42660 | 0.821306 | 4.33E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene42660 | 0.885468 | 7.92E-72 | -1.69E-46 |
| MS.gene058787 | MS.gene42660 | 0.804646 | 1.95E-49 | -1.69E-46 |
| MS.gene058903 | MS.gene42660 | 0.824502 | 7.80E-54 | -1.69E-46 |
| MS.gene058928 | MS.gene42660 | 0.808942 | 2.42E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene42660 | 0.879368 | 1.32E-69 | -1.69E-46 |
| MS.gene059228 | MS.gene42660 | 0.832215 | 1.07E-55 | -1.69E-46 |
| MS.gene059294 | MS.gene42660 | 0.864278 | 1.36E-64 | -1.69E-46 |
| MS.gene059342 | MS.gene42660 | 0.806817 | 6.84E-50 | -1.69E-46 |
| MS.gene059518 | MS.gene42660 | 0.843762 | 1.15E-58 | -1.69E-46 |
| MS.gene059597 | MS.gene42660 | 0.850589 | 1.54E-60 | -1.69E-46 |
| MS.gene059676 | MS.gene42660 | 0.846133 | 2.63E-59 | -1.69E-46 |
| MS.gene059688 | MS.gene42660 | 0.841846 | 3.71E-58 | -1.69E-46 |
| MS.gene059692 | MS.gene42660 | 0.84929 | 3.56E-60 | -1.69E-46 |
| MS.gene059695 | MS.gene42660 | 0.847246 | 1.31E-59 | -1.69E-46 |
| MS.gene059708 | MS.gene42660 | 0.810789 | 9.68E-51 | -1.69E-46 |
| MS.gene059711 | MS.gene42660 | 0.811722 | 6.07E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene42660 | 0.846532 | 2.05E-59 | -1.69E-46 |
| MS.gene059894 | MS.gene42660 | 0.838659 | 2.52E-57 | -1.69E-46 |
| MS.gene059974 | MS.gene42660 | 0.86256 | 4.65E-64 | -1.69E-46 |
| MS.gene060005 | MS.gene42660 | 0.896109 | 5.06E-76 | -1.69E-46 |
| MS.gene06037 | MS.gene42660 | 0.871986 | 4.50E-67 | -1.69E-46 |
| MS.gene060495 | MS.gene42660 | 0.808495 | 3.01E-50 | -1.69E-46 |
| MS.gene060559 | MS.gene42660 | 0.886002 | 4.99E-72 | -1.69E-46 |
| MS.gene060799 | MS.gene42660 | 0.803907 | 2.79E-49 | -1.69E-46 |
| MS.gene060800 | MS.gene42660 | 0.845517 | 3.87E-59 | -1.69E-46 |
| MS.gene060801 | MS.gene42660 | 0.813851 | 2.08E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene42660 | 0.800612 | 1.33E-48 | -1.69E-46 |
| MS.gene06090 | MS.gene42660 | 0.803042 | 4.21E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene42660 | 0.866583 | 2.56E-65 | -1.69E-46 |
| MS.gene061051 | MS.gene42660 | -0.835335 | 1.78E-56 | -1.69E-46 |
| MS.gene061112 | MS.gene42660 | 0.805909 | 1.06E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene42660 | 0.812071 | 5.10E-51 | -1.69E-46 |
| MS.gene061265 | MS.gene42660 | 0.808354 | 3.23E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42660.t1 | MTR_3g105550 | 94.041 | 537 | 5 | 1 | 1 | 510 | 1 | 537 | 0.0 | 1035 |
| MS.gene42660.t1 | MTR_1g076430 | 55.489 | 501 | 186 | 4 | 35 | 509 | 17 | 506 | 0.0 | 587 |
| MS.gene42660.t1 | MTR_4g070270 | 55.159 | 504 | 188 | 5 | 32 | 509 | 11 | 502 | 0.0 | 586 |
| MS.gene42660.t1 | MTR_1g041085 | 55.289 | 501 | 187 | 4 | 35 | 509 | 23 | 512 | 0.0 | 585 |
| MS.gene42660.t1 | MTR_2g054940 | 56.989 | 465 | 189 | 3 | 45 | 509 | 52 | 505 | 0.0 | 578 |
| MS.gene42660.t1 | MTR_7g118170 | 53.516 | 512 | 194 | 7 | 32 | 509 | 27 | 528 | 0.0 | 567 |
| MS.gene42660.t1 | MTR_7g081695 | 54.978 | 462 | 185 | 4 | 45 | 506 | 52 | 490 | 0.0 | 540 |
| MS.gene42660.t1 | MTR_2g013740 | 50.867 | 519 | 216 | 7 | 3 | 500 | 2 | 502 | 0.0 | 538 |
| MS.gene42660.t1 | MTR_1g110930 | 56.621 | 438 | 179 | 3 | 72 | 509 | 64 | 490 | 0.0 | 534 |
| MS.gene42660.t1 | MTR_5g056510 | 55.257 | 447 | 189 | 3 | 63 | 509 | 55 | 490 | 0.0 | 533 |
| MS.gene42660.t1 | MTR_4g113280 | 50.600 | 500 | 199 | 5 | 36 | 509 | 6 | 483 | 0.0 | 531 |
| MS.gene42660.t1 | MTR_4g054630 | 47.511 | 442 | 221 | 3 | 70 | 510 | 36 | 467 | 2.40e-153 | 446 |
| MS.gene42660.t1 | MTR_4g054415 | 48.252 | 429 | 211 | 3 | 83 | 510 | 8 | 426 | 3.49e-153 | 444 |
| MS.gene42660.t1 | MTR_6g074880 | 47.964 | 442 | 219 | 3 | 70 | 510 | 38 | 469 | 1.45e-152 | 444 |
| MS.gene42660.t1 | MTR_7g118160 | 50.605 | 413 | 150 | 4 | 96 | 506 | 56 | 416 | 2.93e-149 | 434 |
| MS.gene42660.t1 | MTR_6g032965 | 51.399 | 393 | 181 | 2 | 117 | 509 | 2 | 384 | 3.40e-149 | 432 |
| MS.gene42660.t1 | MTR_2g007020 | 45.694 | 418 | 216 | 4 | 92 | 509 | 45 | 451 | 2.79e-137 | 404 |
| MS.gene42660.t1 | MTR_2g436480 | 44.471 | 425 | 225 | 5 | 86 | 509 | 37 | 451 | 2.25e-134 | 397 |
| MS.gene42660.t1 | MTR_3g072940 | 41.943 | 422 | 233 | 3 | 88 | 508 | 74 | 484 | 8.64e-118 | 355 |
| MS.gene42660.t1 | MTR_3g072980 | 41.943 | 422 | 233 | 3 | 88 | 508 | 74 | 484 | 8.92e-118 | 355 |
| MS.gene42660.t1 | MTR_1g102290 | 40.144 | 416 | 240 | 2 | 91 | 506 | 77 | 483 | 1.72e-116 | 352 |
| MS.gene42660.t1 | MTR_4g062270 | 39.636 | 439 | 251 | 5 | 71 | 506 | 6 | 433 | 1.94e-112 | 341 |
| MS.gene42660.t1 | MTR_1g115560 | 36.782 | 435 | 258 | 3 | 85 | 506 | 21 | 451 | 1.89e-110 | 337 |
| MS.gene42660.t1 | MTR_4g062170 | 37.444 | 446 | 259 | 3 | 71 | 506 | 6 | 441 | 9.57e-110 | 334 |
| MS.gene42660.t1 | MTR_6g051440 | 41.050 | 419 | 235 | 3 | 91 | 508 | 76 | 483 | 1.87e-109 | 334 |
| MS.gene42660.t1 | MTR_2g096210 | 37.955 | 440 | 268 | 4 | 71 | 506 | 6 | 444 | 5.40e-109 | 333 |
| MS.gene42660.t1 | MTR_4g062190 | 37.327 | 434 | 265 | 2 | 77 | 506 | 12 | 442 | 2.51e-107 | 328 |
| MS.gene42660.t1 | MTR_4g054260 | 44.318 | 264 | 116 | 4 | 246 | 506 | 87 | 322 | 1.33e-70 | 228 |
| MS.gene42660.t1 | MTR_4g053905 | 50.602 | 166 | 73 | 1 | 345 | 510 | 4 | 160 | 1.07e-53 | 178 |
| MS.gene42660.t1 | MTR_4g054265 | 39.130 | 115 | 69 | 1 | 79 | 193 | 4 | 117 | 2.97e-22 | 92.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42660.t1 | AT2G26250 | 70.599 | 551 | 114 | 4 | 3 | 509 | 4 | 550 | 0.0 | 806 |
| MS.gene42660.t1 | AT1G19440 | 56.436 | 505 | 182 | 5 | 32 | 510 | 23 | 515 | 0.0 | 603 |
| MS.gene42660.t1 | AT2G16280 | 54.183 | 502 | 192 | 5 | 35 | 510 | 22 | 511 | 0.0 | 571 |
| MS.gene42660.t1 | AT2G26640 | 53.200 | 500 | 197 | 4 | 36 | 509 | 15 | 503 | 0.0 | 570 |
| MS.gene42660.t1 | AT1G01120 | 52.652 | 509 | 200 | 5 | 32 | 509 | 28 | 526 | 0.0 | 566 |
| MS.gene42660.t1 | AT1G04220 | 60.000 | 435 | 159 | 4 | 79 | 507 | 88 | 513 | 0.0 | 559 |
| MS.gene42660.t1 | AT1G68530 | 57.303 | 445 | 179 | 3 | 63 | 507 | 56 | 489 | 0.0 | 548 |
| MS.gene42660.t1 | AT5G43760 | 57.080 | 452 | 180 | 4 | 63 | 509 | 78 | 520 | 0.0 | 537 |
| MS.gene42660.t1 | AT4G34510 | 58.352 | 437 | 165 | 4 | 81 | 510 | 60 | 486 | 0.0 | 536 |
| MS.gene42660.t1 | AT1G25450 | 55.353 | 439 | 185 | 3 | 69 | 507 | 57 | 484 | 0.0 | 523 |
| MS.gene42660.t1 | AT2G15090 | 51.515 | 462 | 205 | 4 | 57 | 510 | 30 | 480 | 6.86e-171 | 491 |
| MS.gene42660.t1 | AT2G46720 | 52.103 | 428 | 193 | 3 | 85 | 510 | 49 | 466 | 2.72e-169 | 486 |
| MS.gene42660.t1 | AT4G34520 | 49.558 | 452 | 208 | 5 | 69 | 510 | 50 | 491 | 3.00e-162 | 470 |
| MS.gene42660.t1 | AT4G34250 | 48.326 | 478 | 217 | 8 | 45 | 510 | 29 | 488 | 4.59e-162 | 469 |
| MS.gene42660.t1 | AT3G10280 | 50.935 | 428 | 191 | 4 | 85 | 510 | 49 | 459 | 7.10e-162 | 467 |
| MS.gene42660.t1 | AT3G52160 | 49.760 | 416 | 168 | 3 | 83 | 498 | 75 | 449 | 1.31e-151 | 441 |
| MS.gene42660.t1 | AT5G49070 | 45.786 | 439 | 228 | 5 | 72 | 509 | 26 | 455 | 4.67e-138 | 407 |
| MS.gene42660.t1 | AT3G52160 | 50.798 | 376 | 144 | 3 | 123 | 498 | 2 | 336 | 6.56e-138 | 402 |
| MS.gene42660.t1 | AT1G71160 | 45.747 | 435 | 222 | 6 | 74 | 507 | 25 | 446 | 1.95e-136 | 402 |
| MS.gene42660.t1 | AT1G68530 | 53.355 | 313 | 145 | 1 | 63 | 375 | 56 | 367 | 1.48e-118 | 353 |
| MS.gene42660.t1 | AT2G28630 | 39.762 | 420 | 238 | 3 | 97 | 506 | 32 | 446 | 4.43e-112 | 340 |
| MS.gene42660.t1 | AT2G28630 | 39.762 | 420 | 238 | 3 | 97 | 506 | 32 | 446 | 4.43e-112 | 340 |
| MS.gene42660.t1 | AT1G07720 | 38.242 | 421 | 254 | 2 | 92 | 506 | 27 | 447 | 2.39e-106 | 326 |
| MS.gene42660.t1 | AT1G07720 | 38.242 | 421 | 254 | 2 | 92 | 506 | 70 | 490 | 5.42e-106 | 327 |
| MS.gene42660.t1 | AT5G04530 | 38.876 | 427 | 250 | 6 | 83 | 506 | 19 | 437 | 3.60e-105 | 322 |
| MS.gene42660.t1 | AT5G49070 | 42.907 | 289 | 163 | 2 | 72 | 359 | 26 | 313 | 7.40e-78 | 247 |
Find 102 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAAATGGTTGGATTTAAT+TGG | 0.200611 | 3.3:+86706581 | MS.gene42660:CDS |
| AAGATCTTTGGAAGAAGATT+TGG | 0.211187 | 3.3:+86705269 | MS.gene42660:CDS |
| AGCAAAGACTTAATTGAAAT+TGG | 0.237658 | 3.3:+86707698 | MS.gene42660:CDS |
| TGGAATTATTTCTGTTGATT+TGG | 0.266424 | 3.3:+86706507 | MS.gene42660:CDS |
| GCAAAATCAATGAGATAAAT+AGG | 0.269081 | 3.3:-86705382 | None:intergenic |
| CCCATACGAAAGAAACAATT+TGG | 0.272699 | 3.3:-86706634 | None:intergenic |
| TCCAAATTGTTTCTTTCGTA+TGG | 0.284758 | 3.3:+86706633 | MS.gene42660:CDS |
| GTCTTAGCAAAGAAGATCTT+TGG | 0.301276 | 3.3:+86705257 | MS.gene42660:CDS |
| CTGGTATGAACTTGCTTATA+TGG | 0.315118 | 3.3:+86708030 | MS.gene42660:CDS |
| GTGTCACAAAACCTTCTTCT+AGG | 0.319740 | 3.3:+86708149 | MS.gene42660:CDS |
| GAGTTATAATCTTGGTGGTA+TGG | 0.322514 | 3.3:+86706474 | MS.gene42660:CDS |
| ACAAGAACACCAACATCTTT+TGG | 0.328288 | 3.3:-86706370 | None:intergenic |
| ATGACATTACTATCCTCTTC+TGG | 0.341669 | 3.3:-86706204 | None:intergenic |
| CGTGTTTGGCAACTCGCTTT+TGG | 0.347268 | 3.3:+86708082 | MS.gene42660:CDS |
| TCGTGTTCGGAGACGGTTAC+CGG | 0.354061 | 3.3:+86705114 | MS.gene42660:CDS |
| TCAAAAGCTAGTTTGTAGTT+AGG | 0.354642 | 3.3:-86707875 | None:intergenic |
| AGATCTTTGGAAGAAGATTT+GGG | 0.356395 | 3.3:+86705270 | MS.gene42660:CDS |
| GTGCTGATGATCGTAGTTTC+AGG | 0.363245 | 3.3:+86706743 | MS.gene42660:CDS |
| CACATTGTTCGCACACATAA+AGG | 0.364228 | 3.3:+86706721 | MS.gene42660:CDS |
| CTTGATGCTATCACTGATCT+TGG | 0.370851 | 3.3:-86706253 | None:intergenic |
| GTTGGATTTAATTGGTATCA+AGG | 0.381260 | 3.3:+86706589 | MS.gene42660:CDS |
| TTAGTGTGGAGGAACTTCTT+TGG | 0.382188 | 3.3:+86707803 | MS.gene42660:CDS |
| GAAAATAAGCTGTTCTGAAA+AGG | 0.385068 | 3.3:-86707771 | None:intergenic |
| GAGGCATCAATGGTTATGTT+TGG | 0.389034 | 3.3:+86706310 | MS.gene42660:CDS |
| TGACGTTCTCCGTTCGTGTT+CGG | 0.402498 | 3.3:+86705101 | MS.gene42660:CDS |
| TTAAAAGAGGAGACCGTGTT+TGG | 0.419933 | 3.3:+86708068 | MS.gene42660:CDS |
| TTTGTTGCATGAAGGTATCT+AGG | 0.420458 | 3.3:+86706122 | MS.gene42660:intron |
| AGTTTGTAGTTAGGAATGTA+TGG | 0.424543 | 3.3:-86707866 | None:intergenic |
| ATTTCTGATCGTCTTCCTCT+TGG | 0.433317 | 3.3:-86707658 | None:intergenic |
| TACTAGAAGTGTTGCCGAAT+CGG | 0.436153 | 3.3:-86708000 | None:intergenic |
| ATAGTAATGTCATCAGGAAT+AGG | 0.445521 | 3.3:+86706214 | MS.gene42660:CDS |
| ATAGAGCTAGCAAGAAAATC+AGG | 0.445908 | 3.3:+86706154 | MS.gene42660:CDS |
| CTTATAATGATTTATAATCA+TGG | 0.446526 | 3.3:-86706434 | None:intergenic |
| AACCTTCTTCTAGGAACCCT+TGG | 0.447884 | 3.3:+86708158 | MS.gene42660:CDS |
| CCAAATTGTTTCTTTCGTAT+GGG | 0.454636 | 3.3:+86706634 | MS.gene42660:CDS |
| AAAATAAGCTGTTCTGAAAA+GGG | 0.455046 | 3.3:-86707770 | None:intergenic |
| AGTTATAATCTTGGTGGTAT+GGG | 0.456663 | 3.3:+86706475 | MS.gene42660:CDS |
| AGAATGACGCTGCACCGATT+CGG | 0.461090 | 3.3:+86707986 | MS.gene42660:CDS |
| TTAAGTGTAACAGTGCTGTT+TGG | 0.462133 | 3.3:+86708113 | MS.gene42660:CDS |
| GAATCATCGGGTCCGAATGC+CGG | 0.462409 | 3.3:+86705073 | MS.gene42660:CDS |
| TTCACAGATTGAAGAAAATC+CGG | 0.470100 | 3.3:-86705133 | None:intergenic |
| GGTGGTATGGGTTGTAGTGC+TGG | 0.477344 | 3.3:+86706487 | MS.gene42660:CDS |
| GCTTGTTAATTGAGAGAAGC+AGG | 0.477899 | 3.3:-86708202 | None:intergenic |
| AACGTCAATGAACCGGCATT+CGG | 0.478252 | 3.3:-86705085 | None:intergenic |
| AACGGAGAACGTCAATGAAC+CGG | 0.480789 | 3.3:-86705092 | None:intergenic |
| TTATTTCTGTTGATTTGGCT+AGG | 0.487535 | 3.3:+86706512 | MS.gene42660:CDS |
| AGCCAAGGGTTCCTAGAAGA+AGG | 0.494068 | 3.3:-86708160 | None:intergenic |
| TATAAATCATTATAAGATGA+GGG | 0.494261 | 3.3:+86706441 | MS.gene42660:CDS |
| GAACCGTGGGATTGAATCAT+CGG | 0.497131 | 3.3:+86705060 | MS.gene42660:CDS |
| TGTTGTTGTGAGTACTGAAA+TGG | 0.505211 | 3.3:+86706567 | MS.gene42660:CDS |
| ACACTTCTAGTAGCAGCATC+TGG | 0.506481 | 3.3:+86708011 | MS.gene42660:CDS |
| AAGAGGATAGTAATGTCATC+AGG | 0.507961 | 3.3:+86706208 | MS.gene42660:CDS |
| GATATACTTCAATCTAATCC+TGG | 0.513349 | 3.3:+86706535 | MS.gene42660:CDS |
| AGGTAGAGCTGAGGCATCAA+TGG | 0.514255 | 3.3:+86706300 | MS.gene42660:CDS |
| AAAGACTTAATTGAAATTGG+TGG | 0.514408 | 3.3:+86707701 | MS.gene42660:CDS |
| GTCACCTTCGTTAGTAGCCA+TGG | 0.517565 | 3.3:-86705017 | None:intergenic |
| AACCGTGGGATTGAATCATC+GGG | 0.521194 | 3.3:+86705061 | MS.gene42660:CDS |
| GTGTGGAGGAACTTCTTTGG+TGG | 0.523308 | 3.3:+86707806 | MS.gene42660:CDS |
| TATTTCTGTTGATTTGGCTA+GGG | 0.527215 | 3.3:+86706513 | MS.gene42660:CDS |
| ACTTGCTTATATGGAAGCTA+AGG | 0.533019 | 3.3:+86708039 | MS.gene42660:CDS |
| TTGTTGCATGAAGGTATCTA+GGG | 0.535906 | 3.3:+86706123 | MS.gene42660:intron |
| TGGAGGAACTTCTTTGGTGG+TGG | 0.537831 | 3.3:+86707809 | MS.gene42660:CDS |
| CATACCTTGAGTTCATCATC+AGG | 0.540416 | 3.3:-86705415 | None:intergenic |
| ATGTATGGCTTGTTTGATGA+TGG | 0.542182 | 3.3:-86707851 | None:intergenic |
| GGAAGACGATCAGAAATTCA+AGG | 0.543870 | 3.3:+86707664 | MS.gene42660:CDS |
| ACTTGTTGTGTTTAGTGCTG+AGG | 0.544147 | 3.3:+86705228 | MS.gene42660:intron |
| TGGCTGACAATGATGGTGTT+GGG | 0.544777 | 3.3:-86706414 | None:intergenic |
| AAATCAGGAAAATTTGATGA+AGG | 0.547989 | 3.3:+86706169 | MS.gene42660:CDS |
| TCTCCGTTCGTGTTCGGAGA+CGG | 0.549060 | 3.3:+86705107 | MS.gene42660:CDS |
| CATCACAACACTAGGACCAT+TGG | 0.552303 | 3.3:+86707742 | MS.gene42660:CDS |
| GCATCAATGCAGTCAAGCCA+AGG | 0.562088 | 3.3:-86708175 | None:intergenic |
| CAGCAGAGATTGTGAACCGT+GGG | 0.563658 | 3.3:+86705047 | MS.gene42660:CDS |
| AACACAGCAACAATGAAAGA+AGG | 0.567448 | 3.3:+86706280 | MS.gene42660:CDS |
| TCTGAAAAGGGTAGGACCAA+TGG | 0.573247 | 3.3:-86707758 | None:intergenic |
| ATGGCTGACAATGATGGTGT+TGG | 0.573943 | 3.3:-86706415 | None:intergenic |
| GGAATTAGACCAAAAGATGT+TGG | 0.576011 | 3.3:+86706361 | MS.gene42660:CDS |
| TGAATTGAGTGACAAGAACA+TGG | 0.579983 | 3.3:+86707955 | MS.gene42660:CDS |
| TCAACCTGATGATGAACTCA+AGG | 0.580290 | 3.3:+86705411 | MS.gene42660:CDS |
| TCACTCTTTACTTCATGTCA+AGG | 0.583752 | 3.3:+86705353 | MS.gene42660:CDS |
| AAAACAAACATCACAACACT+AGG | 0.592072 | 3.3:+86707734 | MS.gene42660:CDS |
| TCGGTGCAGCGTCATTCTAG+AGG | 0.593076 | 3.3:-86707981 | None:intergenic |
| GAAGACGATCAGAAATTCAA+GGG | 0.595322 | 3.3:+86707665 | MS.gene42660:CDS |
| TTATAAATCATTATAAGATG+AGG | 0.596281 | 3.3:+86706440 | MS.gene42660:CDS |
| ATAATCATGGCTGACAATGA+TGG | 0.597899 | 3.3:-86706421 | None:intergenic |
| TAAGCTGTTCTGAAAAGGGT+AGG | 0.602571 | 3.3:-86707766 | None:intergenic |
| GTTGTGTTTAGTGCTGAGGT+TGG | 0.612024 | 3.3:+86705232 | MS.gene42660:intron |
| TCTTTGCTACATTAGTGTGG+AGG | 0.612338 | 3.3:+86707792 | MS.gene42660:CDS |
| CATCAATGCAGTCAAGCCAA+GGG | 0.623256 | 3.3:-86708174 | None:intergenic |
| TAACCGTCTCCGAACACGAA+CGG | 0.625239 | 3.3:-86705110 | None:intergenic |
| ATAAATCATTATAAGATGAG+GGG | 0.630696 | 3.3:+86706442 | MS.gene42660:CDS |
| CAAAAGCGAGTTGCCAAACA+CGG | 0.635869 | 3.3:-86708081 | None:intergenic |
| GAAGTCTAGAATTCCAGAAG+AGG | 0.636342 | 3.3:+86706191 | MS.gene42660:CDS |
| ACAACAACAGCATAGTTACC+AGG | 0.639038 | 3.3:-86706553 | None:intergenic |
| GTTGTGAGTACTGAAATGGT+TGG | 0.646870 | 3.3:+86706571 | MS.gene42660:CDS |
| TCAATGAGATAAATAGGACG+TGG | 0.648831 | 3.3:-86705376 | None:intergenic |
| GACCCGATGATTCAATCCCA+CGG | 0.649181 | 3.3:-86705063 | None:intergenic |
| TCAGCAGAGATTGTGAACCG+TGG | 0.662087 | 3.3:+86705046 | MS.gene42660:CDS |
| AATGAAAGAAGGTAGAGCTG+AGG | 0.691885 | 3.3:+86706291 | MS.gene42660:CDS |
| ATGCAGGTGTGTGTACCAAG+AGG | 0.695574 | 3.3:+86707643 | MS.gene42660:intron |
| CCAACCATGGCTACTAACGA+AGG | 0.698694 | 3.3:+86705013 | None:intergenic |
| GTTCAAGACGATATTTCGCG+CGG | 0.704956 | 3.3:-86706699 | None:intergenic |
| CGCGGCTAAAATCACGACGA+CGG | 0.711833 | 3.3:-86706681 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAAATAAAAATTA+TGG | - | chr3.3:86706053-86706072 | None:intergenic | 0.0% |
| !! | AAAATAAAAATAAAAATTAT+GGG | - | chr3.3:86706052-86706071 | None:intergenic | 0.0% |
| !! | AAAAAAAAAGAGATTAAAAG+AGG | + | chr3.3:86707337-86707356 | MS.gene42660:intron | 15.0% |
| !! | AGTTATTATTATAGATAGAT+TGG | + | chr3.3:86707097-86707116 | MS.gene42660:intron | 15.0% |
| !! | ATAATCAAAATAACTACTAA+TGG | + | chr3.3:86707257-86707276 | MS.gene42660:intron | 15.0% |
| !! | ATCATCGATATATAATATAA+AGG | - | chr3.3:86705866-86705885 | None:intergenic | 15.0% |
| !! | CTTATAATGATTTATAATCA+TGG | - | chr3.3:86706437-86706456 | None:intergenic | 15.0% |
| !! | TAAGTGATATAAAATATTGT+AGG | + | chr3.3:86705568-86705587 | MS.gene42660:intron | 15.0% |
| !! | TATAAATCATTATAAGATGA+GGG | + | chr3.3:86706441-86706460 | MS.gene42660:CDS | 15.0% |
| !! | TTAAAACTAAACATAGAAAA+TGG | - | chr3.3:86705794-86705813 | None:intergenic | 15.0% |
| !! | TTATAAATCATTATAAGATG+AGG | + | chr3.3:86706440-86706459 | MS.gene42660:CDS | 15.0% |
| !!! | AAAAATGTATCTTTTTATGA+TGG | + | chr3.3:86705948-86705967 | MS.gene42660:intron | 15.0% |
| !!! | AATATTTTGAGTTATAATCT+TGG | + | chr3.3:86706466-86706485 | MS.gene42660:CDS | 15.0% |
| !!! | AGAGATTTCTTTTTTAAAAA+AGG | - | chr3.3:86705990-86706009 | None:intergenic | 15.0% |
| !!! | TTTAGTTTTAATTGTAATTG+TGG | + | chr3.3:86705803-86705822 | MS.gene42660:intron | 15.0% |
| !!! | TTTTTTTTTTTATTACCACT+CGG | - | chr3.3:86705526-86705545 | None:intergenic | 15.0% |
| !! | ACAGAATAGTAATCAAAATA+TGG | - | chr3.3:86707171-86707190 | None:intergenic | 20.0% |
| !! | AGAATAGTAATCAAAATATG+GGG | - | chr3.3:86707169-86707188 | None:intergenic | 20.0% |
| !! | ATAAATCATTATAAGATGAG+GGG | + | chr3.3:86706442-86706461 | MS.gene42660:CDS | 20.0% |
| !! | ATATCATAATTTCGGTTTAA+TGG | + | chr3.3:86706911-86706930 | MS.gene42660:intron | 20.0% |
| !! | CAGAATAGTAATCAAAATAT+GGG | - | chr3.3:86707170-86707189 | None:intergenic | 20.0% |
| !! | GATCAAACATATCATAATTT+CGG | + | chr3.3:86706903-86706922 | MS.gene42660:intron | 20.0% |
| !! | TAAATTAATTAACCAACATG+TGG | + | chr3.3:86705495-86705514 | MS.gene42660:intron | 20.0% |
| !! | TCAAAATAGTAAGATATGAT+TGG | - | chr3.3:86706781-86706800 | None:intergenic | 20.0% |
| !!! | TTTTTTATTTTTAAGGGATG+AGG | + | chr3.3:86707066-86707085 | MS.gene42660:intron | 20.0% |
| ! | AAAGACTTAATTGAAATTGG+TGG | + | chr3.3:86707701-86707720 | MS.gene42660:CDS | 25.0% |
| ! | AAATCAGGAAAATTTGATGA+AGG | + | chr3.3:86706169-86706188 | MS.gene42660:CDS | 25.0% |
| ! | AACCTTAAGTATGTGAAATT+GGG | + | chr3.3:86705154-86705173 | MS.gene42660:intron | 25.0% |
| ! | AAGGTTAAGCCAAAAAATAT+TGG | - | chr3.3:86707549-86707568 | None:intergenic | 25.0% |
| ! | AGCAAAGACTTAATTGAAAT+TGG | + | chr3.3:86707698-86707717 | MS.gene42660:CDS | 25.0% |
| ! | CTAAACACAACAAGTAAAAT+TGG | - | chr3.3:86705223-86705242 | None:intergenic | 25.0% |
| ! | GCAAAATCAATGAGATAAAT+AGG | - | chr3.3:86705385-86705404 | None:intergenic | 25.0% |
| ! | TCGAACTTCATATTATCAAA+AGG | - | chr3.3:86707568-86707587 | None:intergenic | 25.0% |
| !!! | AAAATAAGCTGTTCTGAAAA+GGG | - | chr3.3:86707773-86707792 | None:intergenic | 25.0% |
| !!! | AGCTTTAGAGTTTTTTATCT+AGG | + | chr3.3:86705619-86705638 | MS.gene42660:intron | 25.0% |
| !!! | ATATCACTTAACTTGCTTAA+AGG | - | chr3.3:86705558-86705577 | None:intergenic | 25.0% |
| !!! | ATGTGGTTACCAATATTTTT+TGG | + | chr3.3:86707537-86707556 | MS.gene42660:intron | 25.0% |
| !!! | ATTTTGAGTTATAATCTTGG+TGG | + | chr3.3:86706469-86706488 | MS.gene42660:CDS | 25.0% |
| !!! | TGAGACTGTTTTTATTCTTT+TGG | - | chr3.3:86707202-86707221 | None:intergenic | 25.0% |
| !!! | TGGAATTATTTCTGTTGATT+TGG | + | chr3.3:86706507-86706526 | MS.gene42660:CDS | 25.0% |
| AAAACAAACATCACAACACT+AGG | + | chr3.3:86707734-86707753 | MS.gene42660:CDS | 30.0% | |
| AAATGACCTAACTTTCATGT+GGG | + | chr3.3:86707475-86707494 | MS.gene42660:intron | 30.0% | |
| AACCCAATTTCACATACTTA+AGG | - | chr3.3:86705159-86705178 | None:intergenic | 30.0% | |
| ACACAAAATTTAGTCCATGA+TGG | - | chr3.3:86707124-86707143 | None:intergenic | 30.0% | |
| AGTTTGTAGTTAGGAATGTA+TGG | - | chr3.3:86707869-86707888 | None:intergenic | 30.0% | |
| ATAGTAATGTCATCAGGAAT+AGG | + | chr3.3:86706214-86706233 | MS.gene42660:CDS | 30.0% | |
| ATGTCTAGAAAAACTTGTGT+TGG | + | chr3.3:86706082-86706101 | MS.gene42660:intron | 30.0% | |
| CTGAAATGGTTGGATTTAAT+TGG | + | chr3.3:86706581-86706600 | MS.gene42660:CDS | 30.0% | |
| GAACCTTAAGTATGTGAAAT+TGG | + | chr3.3:86705153-86705172 | MS.gene42660:intron | 30.0% | |
| GATATACTTCAATCTAATCC+TGG | + | chr3.3:86706535-86706554 | MS.gene42660:CDS | 30.0% | |
| GCTAAGGAAAAAGTTAAAAG+AGG | + | chr3.3:86708055-86708074 | MS.gene42660:CDS | 30.0% | |
| GTTGGATTTAATTGGTATCA+AGG | + | chr3.3:86706589-86706608 | MS.gene42660:CDS | 30.0% | |
| TAAATGACCTAACTTTCATG+TGG | + | chr3.3:86707474-86707493 | MS.gene42660:intron | 30.0% | |
| TACCATTATCTGATAAACCA+TGG | + | chr3.3:86705178-86705197 | MS.gene42660:intron | 30.0% | |
| TAGTGAACAAATAAACACCA+TGG | - | chr3.3:86705198-86705217 | None:intergenic | 30.0% | |
| TGTGAATAAACACCAACAAA+AGG | + | chr3.3:86707501-86707520 | MS.gene42660:intron | 30.0% | |
| TTCACAGATTGAAGAAAATC+CGG | - | chr3.3:86705136-86705155 | None:intergenic | 30.0% | |
| ! | AAGATCTTTGGAAGAAGATT+TGG | + | chr3.3:86705269-86705288 | MS.gene42660:CDS | 30.0% |
| ! | AGATCTTTGGAAGAAGATTT+GGG | + | chr3.3:86705270-86705289 | MS.gene42660:CDS | 30.0% |
| ! | AGTTATAATCTTGGTGGTAT+GGG | + | chr3.3:86706475-86706494 | MS.gene42660:CDS | 30.0% |
| ! | CCAAATTGTTTCTTTCGTAT+GGG | + | chr3.3:86706634-86706653 | MS.gene42660:CDS | 30.0% |
| ! | GATGAACTCTTTGAAAAAAC+AGG | + | chr3.3:86706340-86706359 | MS.gene42660:CDS | 30.0% |
| ! | TCAAAAGCTAGTTTGTAGTT+AGG | - | chr3.3:86707878-86707897 | None:intergenic | 30.0% |
| ! | TCCAAATTGTTTCTTTCGTA+TGG | + | chr3.3:86706633-86706652 | MS.gene42660:CDS | 30.0% |
| ! | TTATGGTTTCCCTTTTATGA+GGG | + | chr3.3:86707031-86707050 | MS.gene42660:intron | 30.0% |
| ! | TTTATGGTTTCCCTTTTATG+AGG | + | chr3.3:86707030-86707049 | MS.gene42660:intron | 30.0% |
| ! | TTTGTTGGTGTTTATTCACA+AGG | - | chr3.3:86707501-86707520 | None:intergenic | 30.0% |
| ! | TTTTCTTTGCTACATTAGTG+TGG | + | chr3.3:86707789-86707808 | MS.gene42660:CDS | 30.0% |
| !! | ACAATGAATTTGTTGCATGA+AGG | + | chr3.3:86706114-86706133 | MS.gene42660:intron | 30.0% |
| !! | GAAAATAAGCTGTTCTGAAA+AGG | - | chr3.3:86707774-86707793 | None:intergenic | 30.0% |
| !! | TATTTCTGTTGATTTGGCTA+GGG | + | chr3.3:86706513-86706532 | MS.gene42660:CDS | 30.0% |
| !! | TTATTTCTGTTGATTTGGCT+AGG | + | chr3.3:86706512-86706531 | MS.gene42660:CDS | 30.0% |
| AACACAGCAACAATGAAAGA+AGG | + | chr3.3:86706280-86706299 | MS.gene42660:CDS | 35.0% | |
| AAGAGGATAGTAATGTCATC+AGG | + | chr3.3:86706208-86706227 | MS.gene42660:CDS | 35.0% | |
| ACAGAATACTAATCCTTCCT+TGG | - | chr3.3:86705654-86705673 | None:intergenic | 35.0% | |
| ACTTGCTTATATGGAAGCTA+AGG | + | chr3.3:86708039-86708058 | MS.gene42660:CDS | 35.0% | |
| ATAATCATGGCTGACAATGA+TGG | - | chr3.3:86706424-86706443 | None:intergenic | 35.0% | |
| ATAGAGCTAGCAAGAAAATC+AGG | + | chr3.3:86706154-86706173 | MS.gene42660:CDS | 35.0% | |
| ATGACATTACTATCCTCTTC+TGG | - | chr3.3:86706207-86706226 | None:intergenic | 35.0% | |
| CACCATGGTTTATCAGATAA+TGG | - | chr3.3:86705183-86705202 | None:intergenic | 35.0% | |
| CCCATACGAAAGAAACAATT+TGG | - | chr3.3:86706637-86706656 | None:intergenic | 35.0% | |
| CTTAACTGTAACACAAATGC+AGG | + | chr3.3:86707627-86707646 | MS.gene42660:intron | 35.0% | |
| GAAGACGATCAGAAATTCAA+GGG | + | chr3.3:86707665-86707684 | MS.gene42660:CDS | 35.0% | |
| GACATCAGATCACAACTTTA+GGG | + | chr3.3:86705720-86705739 | MS.gene42660:intron | 35.0% | |
| GGAATTAGACCAAAAGATGT+TGG | + | chr3.3:86706361-86706380 | MS.gene42660:CDS | 35.0% | |
| GTCTTAGCAAAGAAGATCTT+TGG | + | chr3.3:86705257-86705276 | MS.gene42660:CDS | 35.0% | |
| GTTTGATCTCTATTCGTCAA+CGG | - | chr3.3:86706891-86706910 | None:intergenic | 35.0% | |
| TCAATGAGATAAATAGGACG+TGG | - | chr3.3:86705379-86705398 | None:intergenic | 35.0% | |
| TCACTCTTTACTTCATGTCA+AGG | + | chr3.3:86705353-86705372 | MS.gene42660:CDS | 35.0% | |
| TCTAGAAAAACTTGTGTTGG+TGG | + | chr3.3:86706085-86706104 | MS.gene42660:intron | 35.0% | |
| TCTCAATCAATCATCCCTAA+TGG | + | chr3.3:86707217-86707236 | MS.gene42660:intron | 35.0% | |
| TGAATTGAGTGACAAGAACA+TGG | + | chr3.3:86707955-86707974 | MS.gene42660:CDS | 35.0% | |
| TGACATCAGATCACAACTTT+AGG | + | chr3.3:86705719-86705738 | MS.gene42660:intron | 35.0% | |
| ! | AAGGTATGCTTTTGGATATG+TGG | + | chr3.3:86707520-86707539 | MS.gene42660:intron | 35.0% |
| ! | ACAAGAACACCAACATCTTT+TGG | - | chr3.3:86706373-86706392 | None:intergenic | 35.0% |
| ! | ATAGATAGATTGGTCCATCA+TGG | + | chr3.3:86707107-86707126 | MS.gene42660:intron | 35.0% |
| ! | CTGGTATGAACTTGCTTATA+TGG | + | chr3.3:86708030-86708049 | MS.gene42660:CDS | 35.0% |
| ! | GAGTTATAATCTTGGTGGTA+TGG | + | chr3.3:86706474-86706493 | MS.gene42660:CDS | 35.0% |
| ! | TTAAGTGTAACAGTGCTGTT+TGG | + | chr3.3:86708113-86708132 | MS.gene42660:CDS | 35.0% |
| !! | ACCAACAAAAGGTATGCTTT+TGG | + | chr3.3:86707512-86707531 | MS.gene42660:intron | 35.0% |
| !! | ATGTATGGCTTGTTTGATGA+TGG | - | chr3.3:86707854-86707873 | None:intergenic | 35.0% |
| !! | TCCAAAAGCATACCTTTTGT+TGG | - | chr3.3:86707516-86707535 | None:intergenic | 35.0% |
| !! | TCCATCTCACTTTTCCATTA+GGG | - | chr3.3:86707234-86707253 | None:intergenic | 35.0% |
| !! | TGTTGTTGTGAGTACTGAAA+TGG | + | chr3.3:86706567-86706586 | MS.gene42660:CDS | 35.0% |
| !! | TTCCATCTCACTTTTCCATT+AGG | - | chr3.3:86707235-86707254 | None:intergenic | 35.0% |
| !! | TTGTTGCATGAAGGTATCTA+GGG | + | chr3.3:86706123-86706142 | MS.gene42660:intron | 35.0% |
| !! | TTTGTTGCATGAAGGTATCT+AGG | + | chr3.3:86706122-86706141 | MS.gene42660:intron | 35.0% |
| !!! | CTTTTGAAGCTCATCAAGAA+TGG | - | chr3.3:86707930-86707949 | None:intergenic | 35.0% |
| AATGAAAGAAGGTAGAGCTG+AGG | + | chr3.3:86706291-86706310 | MS.gene42660:CDS | 40.0% | |
| ACAACAACAGCATAGTTACC+AGG | - | chr3.3:86706556-86706575 | None:intergenic | 40.0% | |
| ACTATCCATGCCCTCATAAA+AGG | - | chr3.3:86707044-86707063 | None:intergenic | 40.0% | |
| ATTTCTGATCGTCTTCCTCT+TGG | - | chr3.3:86707661-86707680 | None:intergenic | 40.0% | |
| CACATTGTTCGCACACATAA+AGG | + | chr3.3:86706721-86706740 | MS.gene42660:CDS | 40.0% | |
| CATACCTTGAGTTCATCATC+AGG | - | chr3.3:86705418-86705437 | None:intergenic | 40.0% | |
| CTATCCATGCCCTCATAAAA+GGG | - | chr3.3:86707043-86707062 | None:intergenic | 40.0% | |
| CTTGATGCTATCACTGATCT+TGG | - | chr3.3:86706256-86706275 | None:intergenic | 40.0% | |
| GGAAGACGATCAGAAATTCA+AGG | + | chr3.3:86707664-86707683 | MS.gene42660:CDS | 40.0% | |
| GTGTCACAAAACCTTCTTCT+AGG | + | chr3.3:86708149-86708168 | MS.gene42660:CDS | 40.0% | |
| TCCCTAATGGAAAAGTGAGA+TGG | + | chr3.3:86707230-86707249 | MS.gene42660:intron | 40.0% | |
| TCTTTGCTACATTAGTGTGG+AGG | + | chr3.3:86707792-86707811 | MS.gene42660:CDS | 40.0% | |
| TGGGGAAATGAAACATAGCA+TGG | - | chr3.3:86707151-86707170 | None:intergenic | 40.0% | |
| TTAAAAGAGGAGACCGTGTT+TGG | + | chr3.3:86708068-86708087 | MS.gene42660:CDS | 40.0% | |
| TTAGTGTGGAGGAACTTCTT+TGG | + | chr3.3:86707803-86707822 | MS.gene42660:CDS | 40.0% | |
| ! | GAAGTCTAGAATTCCAGAAG+AGG | + | chr3.3:86706191-86706210 | MS.gene42660:CDS | 40.0% |
| ! | GAGGCATCAATGGTTATGTT+TGG | + | chr3.3:86706310-86706329 | MS.gene42660:CDS | 40.0% |
| ! | TATCTAGGACTAAAACGCCA+AGG | + | chr3.3:86705634-86705653 | MS.gene42660:intron | 40.0% |
| ! | TCAACCTGATGATGAACTCA+AGG | + | chr3.3:86705411-86705430 | MS.gene42660:CDS | 40.0% |
| !! | ACTTGTTGTGTTTAGTGCTG+AGG | + | chr3.3:86705228-86705247 | MS.gene42660:intron | 40.0% |
| !! | GTTGTGAGTACTGAAATGGT+TGG | + | chr3.3:86706571-86706590 | MS.gene42660:CDS | 40.0% |
| !! | TAAGCTGTTCTGAAAAGGGT+AGG | - | chr3.3:86707769-86707788 | None:intergenic | 40.0% |
| !! | TACTAGAAGTGTTGCCGAAT+CGG | - | chr3.3:86708003-86708022 | None:intergenic | 40.0% |
| AACCGTGGGATTGAATCATC+GGG | + | chr3.3:86705061-86705080 | MS.gene42660:CDS | 45.0% | |
| AACGGAGAACGTCAATGAAC+CGG | - | chr3.3:86705095-86705114 | None:intergenic | 45.0% | |
| AACGTCAATGAACCGGCATT+CGG | - | chr3.3:86705088-86705107 | None:intergenic | 45.0% | |
| ACAAGGCCCACATGAAAGTT+AGG | - | chr3.3:86707484-86707503 | None:intergenic | 45.0% | |
| ACACTTCTAGTAGCAGCATC+TGG | + | chr3.3:86708011-86708030 | MS.gene42660:CDS | 45.0% | |
| CAAAAGCGAGTTGCCAAACA+CGG | - | chr3.3:86708084-86708103 | None:intergenic | 45.0% | |
| CATCAATGCAGTCAAGCCAA+GGG | - | chr3.3:86708177-86708196 | None:intergenic | 45.0% | |
| CATCACAACACTAGGACCAT+TGG | + | chr3.3:86707742-86707761 | MS.gene42660:CDS | 45.0% | |
| GAACCGTGGGATTGAATCAT+CGG | + | chr3.3:86705060-86705079 | MS.gene42660:CDS | 45.0% | |
| GTTCAAGACGATATTTCGCG+CGG | - | chr3.3:86706702-86706721 | None:intergenic | 45.0% | |
| TAGGACTAAAACGCCAAGGA+AGG | + | chr3.3:86705638-86705657 | MS.gene42660:intron | 45.0% | |
| TCTGAAAAGGGTAGGACCAA+TGG | - | chr3.3:86707761-86707780 | None:intergenic | 45.0% | |
| ! | AACCTTCTTCTAGGAACCCT+TGG | + | chr3.3:86708158-86708177 | MS.gene42660:CDS | 45.0% |
| ! | ATGGCTGACAATGATGGTGT+TGG | - | chr3.3:86706418-86706437 | None:intergenic | 45.0% |
| ! | GTGCTGATGATCGTAGTTTC+AGG | + | chr3.3:86706743-86706762 | MS.gene42660:CDS | 45.0% |
| ! | GTTGTGTTTAGTGCTGAGGT+TGG | + | chr3.3:86705232-86705251 | MS.gene42660:intron | 45.0% |
| ! | GTTTCCCTTTTATGAGGGCA+TGG | + | chr3.3:86707036-86707055 | MS.gene42660:intron | 45.0% |
| ! | TGGCTGACAATGATGGTGTT+GGG | - | chr3.3:86706417-86706436 | None:intergenic | 45.0% |
| !! | TATCAATAATAATAAATTTA+TGG | + | chr3.3:86707014-86707033 | MS.gene42660:intron | 5.0% |
| !!! | ATAGTTTTTTTTTATTTTTA+AGG | + | chr3.3:86707059-86707078 | MS.gene42660:intron | 5.0% |
| !!! | TAGTTTTTTTTTATTTTTAA+GGG | + | chr3.3:86707060-86707079 | MS.gene42660:intron | 5.0% |
| !!! | TTTATTTTTTTAAACTTTAA+AGG | - | chr3.3:86707440-86707459 | None:intergenic | 5.0% |
| AGCCAAGGGTTCCTAGAAGA+AGG | - | chr3.3:86708163-86708182 | None:intergenic | 50.0% | |
| ATGCAGGTGTGTGTACCAAG+AGG | + | chr3.3:86707643-86707662 | MS.gene42660:intron | 50.0% | |
| CAACATGTGGTTGATCCGAG+TGG | + | chr3.3:86705508-86705527 | MS.gene42660:intron | 50.0% | |
| CACTCGGATCAACCACATGT+TGG | - | chr3.3:86705510-86705529 | None:intergenic | 50.0% | |
| CAGCAGAGATTGTGAACCGT+GGG | + | chr3.3:86705047-86705066 | MS.gene42660:CDS | 50.0% | |
| GACCCGATGATTCAATCCCA+CGG | - | chr3.3:86705066-86705085 | None:intergenic | 50.0% | |
| GCATCAATGCAGTCAAGCCA+AGG | - | chr3.3:86708178-86708197 | None:intergenic | 50.0% | |
| GTGTGGAGGAACTTCTTTGG+TGG | + | chr3.3:86707806-86707825 | MS.gene42660:CDS | 50.0% | |
| TAACCGTCTCCGAACACGAA+CGG | - | chr3.3:86705113-86705132 | None:intergenic | 50.0% | |
| TCAGCAGAGATTGTGAACCG+TGG | + | chr3.3:86705046-86705065 | MS.gene42660:CDS | 50.0% | |
| TGACGTTCTCCGTTCGTGTT+CGG | + | chr3.3:86705101-86705120 | MS.gene42660:CDS | 50.0% | |
| TGGAGGAACTTCTTTGGTGG+TGG | + | chr3.3:86707809-86707828 | MS.gene42660:CDS | 50.0% | |
| ! | AGGTAGAGCTGAGGCATCAA+TGG | + | chr3.3:86706300-86706319 | MS.gene42660:CDS | 50.0% |
| ! | CGTGTTTGGCAACTCGCTTT+TGG | + | chr3.3:86708082-86708101 | MS.gene42660:CDS | 50.0% |
| !! | AGAATGACGCTGCACCGATT+CGG | + | chr3.3:86707986-86708005 | MS.gene42660:CDS | 50.0% |
| !!! | TGGCAACTCGCTTTTGGTTC+TGG | + | chr3.3:86708088-86708107 | MS.gene42660:CDS | 50.0% |
| CGCGGCTAAAATCACGACGA+CGG | - | chr3.3:86706684-86706703 | None:intergenic | 55.0% | |
| GAATCATCGGGTCCGAATGC+CGG | + | chr3.3:86705073-86705092 | MS.gene42660:CDS | 55.0% | |
| TCGGTGCAGCGTCATTCTAG+AGG | - | chr3.3:86707984-86708003 | None:intergenic | 55.0% | |
| TCGTGTTCGGAGACGGTTAC+CGG | + | chr3.3:86705114-86705133 | MS.gene42660:CDS | 55.0% | |
| TCTCCGTTCGTGTTCGGAGA+CGG | + | chr3.3:86705107-86705126 | MS.gene42660:CDS | 55.0% | |
| ! | GGTGGTATGGGTTGTAGTGC+TGG | + | chr3.3:86706487-86706506 | MS.gene42660:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 86705019 | 86708219 | 86705019 | ID=MS.gene42660 |
| chr3.3 | mRNA | 86705019 | 86708219 | 86705019 | ID=MS.gene42660.t1;Parent=MS.gene42660 |
| chr3.3 | exon | 86705019 | 86705161 | 86705019 | ID=MS.gene42660.t1.exon1;Parent=MS.gene42660.t1 |
| chr3.3 | CDS | 86705019 | 86705161 | 86705019 | ID=cds.MS.gene42660.t1;Parent=MS.gene42660.t1 |
| chr3.3 | exon | 86705243 | 86705432 | 86705243 | ID=MS.gene42660.t1.exon2;Parent=MS.gene42660.t1 |
| chr3.3 | CDS | 86705243 | 86705432 | 86705243 | ID=cds.MS.gene42660.t1;Parent=MS.gene42660.t1 |
| chr3.3 | exon | 86706136 | 86706764 | 86706136 | ID=MS.gene42660.t1.exon3;Parent=MS.gene42660.t1 |
| chr3.3 | CDS | 86706136 | 86706764 | 86706136 | ID=cds.MS.gene42660.t1;Parent=MS.gene42660.t1 |
| chr3.3 | exon | 86707649 | 86708219 | 86707649 | ID=MS.gene42660.t1.exon4;Parent=MS.gene42660.t1 |
| chr3.3 | CDS | 86707649 | 86708219 | 86707649 | ID=cds.MS.gene42660.t1;Parent=MS.gene42660.t1 |
| Gene Sequence |
| Protein sequence |
