Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49092.t1 | XP_024635968.1 | 71.8 | 999 | 245 | 5 | 10 | 998 | 152 | 1123 | 0.00E+00 | 1481.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49092.t1 | O03982 | 53.4 | 73 | 32 | 2 | 1038 | 1109 | 2 | 73 | 2.6e-09 | 66.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49092.t1 | A0A2K3NLS3 | 59.6 | 1024 | 355 | 4 | 1 | 993 | 318 | 1313 | 0.0e+00 | 1259.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049153 | MS.gene49092 | 0.800179 | 1.63E-48 | -1.69E-46 |
| MS.gene049356 | MS.gene49092 | 0.866552 | 2.62E-65 | -1.69E-46 |
| MS.gene049369 | MS.gene49092 | 0.840164 | 1.03E-57 | -1.69E-46 |
| MS.gene049396 | MS.gene49092 | 0.822896 | 1.85E-53 | -1.69E-46 |
| MS.gene049488 | MS.gene49092 | 0.817071 | 3.99E-52 | -1.69E-46 |
| MS.gene049910 | MS.gene49092 | 0.805144 | 1.54E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene49092 | 0.827015 | 1.98E-54 | -1.69E-46 |
| MS.gene050426 | MS.gene49092 | -0.815778 | 7.77E-52 | -1.69E-46 |
| MS.gene050464 | MS.gene49092 | 0.801257 | 9.80E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene49092 | 0.804906 | 1.72E-49 | -1.69E-46 |
| MS.gene050625 | MS.gene49092 | 0.80317 | 3.96E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene49092 | 0.901629 | 2.21E-78 | -1.69E-46 |
| MS.gene050971 | MS.gene49092 | 0.840012 | 1.12E-57 | -1.69E-46 |
| MS.gene05105 | MS.gene49092 | 0.850164 | 2.03E-60 | -1.69E-46 |
| MS.gene051360 | MS.gene49092 | 0.833741 | 4.48E-56 | -1.69E-46 |
| MS.gene051387 | MS.gene49092 | 0.841926 | 3.53E-58 | -1.69E-46 |
| MS.gene051521 | MS.gene49092 | 0.825273 | 5.13E-54 | -1.69E-46 |
| MS.gene051525 | MS.gene49092 | 0.844423 | 7.63E-59 | -1.69E-46 |
| MS.gene051582 | MS.gene49092 | 0.814702 | 1.35E-51 | -1.69E-46 |
| MS.gene051588 | MS.gene49092 | 0.80362 | 3.20E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene49092 | 0.801095 | 1.06E-48 | -1.69E-46 |
| MS.gene052011 | MS.gene49092 | -0.83607 | 1.16E-56 | -1.69E-46 |
| MS.gene052077 | MS.gene49092 | 0.819749 | 9.87E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene49092 | 0.871197 | 8.21E-67 | -1.69E-46 |
| MS.gene052253 | MS.gene49092 | 0.858885 | 6.06E-63 | -1.69E-46 |
| MS.gene052310 | MS.gene49092 | 0.820857 | 5.49E-53 | -1.69E-46 |
| MS.gene052340 | MS.gene49092 | 0.835246 | 1.88E-56 | -1.69E-46 |
| MS.gene052414 | MS.gene49092 | 0.821072 | 4.90E-53 | -1.69E-46 |
| MS.gene052421 | MS.gene49092 | 0.852565 | 4.25E-61 | -1.69E-46 |
| MS.gene052481 | MS.gene49092 | 0.802738 | 4.86E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene49092 | 0.842689 | 2.22E-58 | -1.69E-46 |
| MS.gene052982 | MS.gene49092 | 0.813206 | 2.88E-51 | -1.69E-46 |
| MS.gene052999 | MS.gene49092 | 0.801331 | 9.47E-49 | -1.69E-46 |
| MS.gene053169 | MS.gene49092 | 0.835741 | 1.41E-56 | -1.69E-46 |
| MS.gene05316 | MS.gene49092 | 0.859374 | 4.32E-63 | -1.69E-46 |
| MS.gene053209 | MS.gene49092 | 0.802918 | 4.47E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene49092 | 0.848711 | 5.15E-60 | -1.69E-46 |
| MS.gene053758 | MS.gene49092 | 0.84909 | 4.04E-60 | -1.69E-46 |
| MS.gene053813 | MS.gene49092 | 0.82833 | 9.55E-55 | -1.69E-46 |
| MS.gene053912 | MS.gene49092 | 0.8446 | 6.84E-59 | -1.69E-46 |
| MS.gene053928 | MS.gene49092 | 0.816387 | 5.68E-52 | -1.69E-46 |
| MS.gene054010 | MS.gene49092 | 0.810266 | 1.26E-50 | -1.69E-46 |
| MS.gene054011 | MS.gene49092 | 0.815078 | 1.11E-51 | -1.69E-46 |
| MS.gene054012 | MS.gene49092 | 0.804496 | 2.10E-49 | -1.69E-46 |
| MS.gene054013 | MS.gene49092 | 0.801836 | 7.46E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene49092 | 0.807602 | 4.66E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene49092 | 0.852199 | 5.40E-61 | -1.69E-46 |
| MS.gene054349 | MS.gene49092 | 0.820809 | 5.64E-53 | -1.69E-46 |
| MS.gene054556 | MS.gene49092 | 0.841237 | 5.37E-58 | -1.69E-46 |
| MS.gene05505 | MS.gene49092 | 0.820813 | 5.62E-53 | -1.69E-46 |
| MS.gene055116 | MS.gene49092 | 0.861542 | 9.54E-64 | -1.69E-46 |
| MS.gene055369 | MS.gene49092 | 0.851276 | 9.86E-61 | -1.69E-46 |
| MS.gene05553 | MS.gene49092 | 0.834838 | 2.38E-56 | -1.69E-46 |
| MS.gene055604 | MS.gene49092 | 0.811332 | 7.38E-51 | -1.69E-46 |
| MS.gene055666 | MS.gene49092 | 0.819636 | 1.05E-52 | -1.69E-46 |
| MS.gene055741 | MS.gene49092 | 0.82425 | 8.94E-54 | -1.69E-46 |
| MS.gene055744 | MS.gene49092 | 0.834155 | 3.53E-56 | -1.69E-46 |
| MS.gene055909 | MS.gene49092 | 0.845166 | 4.81E-59 | -1.69E-46 |
| MS.gene055911 | MS.gene49092 | 0.850589 | 1.54E-60 | -1.69E-46 |
| MS.gene056191 | MS.gene49092 | 0.80165 | 8.15E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene49092 | 0.830936 | 2.22E-55 | -1.69E-46 |
| MS.gene056422 | MS.gene49092 | 0.830648 | 2.61E-55 | -1.69E-46 |
| MS.gene056511 | MS.gene49092 | 0.87329 | 1.65E-67 | -1.69E-46 |
| MS.gene056514 | MS.gene49092 | 0.837923 | 3.90E-57 | -1.69E-46 |
| MS.gene056659 | MS.gene49092 | 0.830991 | 2.15E-55 | -1.69E-46 |
| MS.gene056723 | MS.gene49092 | 0.835916 | 1.27E-56 | -1.69E-46 |
| MS.gene056902 | MS.gene49092 | 0.801844 | 7.43E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene49092 | 0.807669 | 4.51E-50 | -1.69E-46 |
| MS.gene057124 | MS.gene49092 | 0.866702 | 2.35E-65 | -1.69E-46 |
| MS.gene057396 | MS.gene49092 | 0.85706 | 2.11E-62 | -1.69E-46 |
| MS.gene057448 | MS.gene49092 | 0.835724 | 1.42E-56 | -1.69E-46 |
| MS.gene057449 | MS.gene49092 | 0.831944 | 1.25E-55 | -1.69E-46 |
| MS.gene057450 | MS.gene49092 | 0.827137 | 1.85E-54 | -1.69E-46 |
| MS.gene057469 | MS.gene49092 | 0.814857 | 1.24E-51 | -1.69E-46 |
| MS.gene057476 | MS.gene49092 | 0.825859 | 3.73E-54 | -1.69E-46 |
| MS.gene057537 | MS.gene49092 | 0.824201 | 9.18E-54 | -1.69E-46 |
| MS.gene057609 | MS.gene49092 | 0.801106 | 1.05E-48 | -1.69E-46 |
| MS.gene057610 | MS.gene49092 | 0.827986 | 1.16E-54 | -1.69E-46 |
| MS.gene057734 | MS.gene49092 | 0.82404 | 1.00E-53 | -1.69E-46 |
| MS.gene057749 | MS.gene49092 | 0.834009 | 3.84E-56 | -1.69E-46 |
| MS.gene057823 | MS.gene49092 | 0.844029 | 9.74E-59 | -1.69E-46 |
| MS.gene057825 | MS.gene49092 | 0.806334 | 8.65E-50 | -1.69E-46 |
| MS.gene058007 | MS.gene49092 | 0.861212 | 1.20E-63 | -1.69E-46 |
| MS.gene058075 | MS.gene49092 | 0.841502 | 4.57E-58 | -1.69E-46 |
| MS.gene058120 | MS.gene49092 | 0.813498 | 2.48E-51 | -1.69E-46 |
| MS.gene058376 | MS.gene49092 | 0.80728 | 5.46E-50 | -1.69E-46 |
| MS.gene05842 | MS.gene49092 | 0.822452 | 2.35E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene49092 | 0.805245 | 1.47E-49 | -1.69E-46 |
| MS.gene058700 | MS.gene49092 | 0.860231 | 2.39E-63 | -1.69E-46 |
| MS.gene05886 | MS.gene49092 | 0.842117 | 3.15E-58 | -1.69E-46 |
| MS.gene058928 | MS.gene49092 | 0.845009 | 5.30E-59 | -1.69E-46 |
| MS.gene058948 | MS.gene49092 | 0.811346 | 7.33E-51 | -1.69E-46 |
| MS.gene058949 | MS.gene49092 | 0.821468 | 3.97E-53 | -1.69E-46 |
| MS.gene058995 | MS.gene49092 | 0.823318 | 1.48E-53 | -1.69E-46 |
| MS.gene059011 | MS.gene49092 | 0.809704 | 1.66E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene49092 | 0.843679 | 1.21E-58 | -1.69E-46 |
| MS.gene059082 | MS.gene49092 | 0.828443 | 8.97E-55 | -1.69E-46 |
| MS.gene059141 | MS.gene49092 | 0.805923 | 1.06E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene49092 | 0.81086 | 9.34E-51 | -1.69E-46 |
| MS.gene059294 | MS.gene49092 | 0.807447 | 5.03E-50 | -1.69E-46 |
| MS.gene059366 | MS.gene49092 | 0.868919 | 4.56E-66 | -1.69E-46 |
| MS.gene059368 | MS.gene49092 | 0.816024 | 6.84E-52 | -1.69E-46 |
| MS.gene059420 | MS.gene49092 | 0.881866 | 1.68E-70 | -1.69E-46 |
| MS.gene059455 | MS.gene49092 | 0.806505 | 7.96E-50 | -1.69E-46 |
| MS.gene059462 | MS.gene49092 | 0.844598 | 6.85E-59 | -1.69E-46 |
| MS.gene059597 | MS.gene49092 | 0.800443 | 1.44E-48 | -1.69E-46 |
| MS.gene059674 | MS.gene49092 | 0.834595 | 2.74E-56 | -1.69E-46 |
| MS.gene059676 | MS.gene49092 | 0.828719 | 7.69E-55 | -1.69E-46 |
| MS.gene059688 | MS.gene49092 | 0.87062 | 1.27E-66 | -1.69E-46 |
| MS.gene059692 | MS.gene49092 | 0.851462 | 8.74E-61 | -1.69E-46 |
| MS.gene059695 | MS.gene49092 | 0.850472 | 1.66E-60 | -1.69E-46 |
| MS.gene059711 | MS.gene49092 | 0.827279 | 1.71E-54 | -1.69E-46 |
| MS.gene059807 | MS.gene49092 | 0.884003 | 2.78E-71 | -1.69E-46 |
| MS.gene05984 | MS.gene49092 | 0.817703 | 2.87E-52 | -1.69E-46 |
| MS.gene059876 | MS.gene49092 | 0.829308 | 5.54E-55 | -1.69E-46 |
| MS.gene059933 | MS.gene49092 | 0.818907 | 1.53E-52 | -1.69E-46 |
| MS.gene059958 | MS.gene49092 | 0.807944 | 3.95E-50 | -1.69E-46 |
| MS.gene060247 | MS.gene49092 | 0.817161 | 3.81E-52 | -1.69E-46 |
| MS.gene060372 | MS.gene49092 | 0.849315 | 3.50E-60 | -1.69E-46 |
| MS.gene060403 | MS.gene49092 | 0.832876 | 7.36E-56 | -1.69E-46 |
| MS.gene060495 | MS.gene49092 | 0.822974 | 1.78E-53 | -1.69E-46 |
| MS.gene060837 | MS.gene49092 | 0.866769 | 2.24E-65 | -1.69E-46 |
| MS.gene060986 | MS.gene49092 | 0.812158 | 4.88E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene49092 | 0.829446 | 5.13E-55 | -1.69E-46 |
| MS.gene061051 | MS.gene49092 | -0.825152 | 5.48E-54 | -1.69E-46 |
| MS.gene061154 | MS.gene49092 | 0.85524 | 7.20E-62 | -1.69E-46 |
| MS.gene061159 | MS.gene49092 | 0.842235 | 2.93E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49092.t1 | MTR_2g008500 | 68.750 | 400 | 124 | 1 | 591 | 989 | 3 | 402 | 0.0 | 608 |
| MS.gene49092.t1 | MTR_7g070710 | 68.421 | 399 | 125 | 1 | 592 | 989 | 3 | 401 | 0.0 | 605 |
| MS.gene49092.t1 | MTR_3g085530 | 64.020 | 403 | 123 | 2 | 591 | 992 | 3 | 384 | 0.0 | 564 |
| MS.gene49092.t1 | MTR_2g038740 | 66.857 | 350 | 103 | 3 | 568 | 911 | 333 | 675 | 6.24e-165 | 504 |
| MS.gene49092.t1 | MTR_2g038740 | 64.935 | 77 | 27 | 0 | 206 | 282 | 256 | 332 | 9.44e-26 | 114 |
| MS.gene49092.t1 | MTR_7g027013 | 65.560 | 241 | 54 | 4 | 592 | 832 | 1 | 212 | 6.22e-94 | 315 |
| MS.gene49092.t1 | MTR_7g027013 | 65.306 | 49 | 17 | 0 | 945 | 993 | 215 | 263 | 1.82e-12 | 72.0 |
| MS.gene49092.t1 | MTR_7g026957 | 48.148 | 297 | 149 | 1 | 707 | 998 | 90 | 386 | 1.39e-93 | 306 |
| MS.gene49092.t1 | MTR_2g089470 | 43.175 | 359 | 163 | 4 | 651 | 993 | 6 | 339 | 3.73e-88 | 301 |
| MS.gene49092.t1 | MTR_2g068990 | 43.175 | 359 | 163 | 4 | 651 | 993 | 6 | 339 | 3.73e-88 | 301 |
| MS.gene49092.t1 | MTR_4g120080 | 42.857 | 357 | 163 | 4 | 651 | 991 | 6 | 337 | 2.39e-87 | 299 |
| MS.gene49092.t1 | MTR_0499s0050 | 39.098 | 399 | 188 | 6 | 593 | 991 | 1 | 344 | 1.06e-85 | 281 |
| MS.gene49092.t1 | MTR_7g112900 | 40.253 | 395 | 161 | 4 | 593 | 987 | 10 | 329 | 3.34e-85 | 280 |
| MS.gene49092.t1 | MTR_8g071880 | 41.390 | 331 | 159 | 4 | 668 | 993 | 14 | 314 | 6.53e-77 | 263 |
| MS.gene49092.t1 | MTR_5g041120 | 52.018 | 223 | 101 | 1 | 666 | 882 | 3 | 225 | 1.64e-75 | 251 |
| MS.gene49092.t1 | MTR_8g447120 | 46.222 | 225 | 94 | 2 | 143 | 366 | 23 | 221 | 1.39e-65 | 222 |
| MS.gene49092.t1 | MTR_0048s0090 | 55.932 | 177 | 78 | 0 | 136 | 312 | 392 | 568 | 4.93e-60 | 216 |
| MS.gene49092.t1 | MTR_5g053570 | 49.510 | 204 | 103 | 0 | 785 | 988 | 1 | 204 | 1.19e-59 | 213 |
| MS.gene49092.t1 | MTR_0014s0220 | 48.824 | 170 | 87 | 0 | 832 | 1001 | 2 | 171 | 1.55e-47 | 184 |
| MS.gene49092.t1 | MTR_4g037510 | 47.771 | 157 | 82 | 0 | 779 | 935 | 48 | 204 | 5.72e-47 | 167 |
| MS.gene49092.t1 | MTR_2g060870 | 40.928 | 237 | 129 | 6 | 221 | 450 | 223 | 455 | 1.36e-46 | 174 |
| MS.gene49092.t1 | MTR_2g049700 | 45.625 | 160 | 86 | 1 | 609 | 768 | 146 | 304 | 5.50e-41 | 154 |
| MS.gene49092.t1 | MTR_5g049660 | 51.724 | 116 | 56 | 0 | 830 | 945 | 8 | 123 | 1.34e-39 | 143 |
| MS.gene49092.t1 | MTR_6g045587 | 51.724 | 116 | 56 | 0 | 830 | 945 | 8 | 123 | 4.42e-39 | 141 |
| MS.gene49092.t1 | MTR_5g049850 | 51.724 | 116 | 56 | 0 | 830 | 945 | 8 | 123 | 4.82e-39 | 141 |
| MS.gene49092.t1 | MTR_4g034880 | 36.047 | 258 | 127 | 6 | 707 | 957 | 1 | 227 | 8.42e-39 | 150 |
| MS.gene49092.t1 | MTR_1g021210 | 41.040 | 173 | 91 | 1 | 832 | 993 | 2 | 174 | 2.99e-37 | 149 |
| MS.gene49092.t1 | MTR_7g034265 | 41.611 | 149 | 76 | 1 | 795 | 932 | 2 | 150 | 3.37e-34 | 129 |
| MS.gene49092.t1 | MTR_8g039210 | 32.636 | 239 | 119 | 4 | 116 | 353 | 269 | 466 | 1.36e-32 | 136 |
| MS.gene49092.t1 | MTR_8g039210 | 38.889 | 126 | 47 | 3 | 725 | 840 | 466 | 571 | 1.61e-15 | 82.0 |
| MS.gene49092.t1 | MTR_0077s0060 | 36.697 | 218 | 125 | 6 | 173 | 388 | 10 | 216 | 8.47e-32 | 127 |
| MS.gene49092.t1 | MTR_1g100587 | 100.000 | 73 | 0 | 0 | 1035 | 1107 | 1 | 73 | 2.40e-30 | 115 |
| MS.gene49092.t1 | MTR_0003s0430 | 31.783 | 258 | 132 | 8 | 148 | 403 | 204 | 419 | 3.01e-28 | 119 |
| MS.gene49092.t1 | MTR_3g107750 | 46.364 | 110 | 43 | 1 | 98 | 207 | 26 | 119 | 6.91e-26 | 106 |
| MS.gene49092.t1 | MTR_8g086130 | 44.554 | 101 | 56 | 0 | 891 | 991 | 1 | 101 | 3.76e-25 | 102 |
| MS.gene49092.t1 | MTR_6g045257 | 87.671 | 73 | 9 | 0 | 1038 | 1110 | 3 | 75 | 3.49e-24 | 98.6 |
| MS.gene49092.t1 | MTR_4g104400 | 31.343 | 201 | 93 | 7 | 1 | 190 | 1 | 167 | 1.27e-22 | 96.3 |
| MS.gene49092.t1 | MTR_2g036820 | 32.653 | 147 | 74 | 1 | 134 | 280 | 103 | 224 | 8.75e-21 | 93.2 |
| MS.gene49092.t1 | MTR_7g013890 | 46.835 | 79 | 42 | 0 | 829 | 907 | 7 | 85 | 1.19e-19 | 85.5 |
| MS.gene49092.t1 | MTR_3g041760 | 48.148 | 81 | 42 | 0 | 894 | 974 | 2 | 82 | 1.23e-19 | 84.7 |
| MS.gene49092.t1 | MTR_1g044190 | 40.678 | 118 | 67 | 1 | 847 | 964 | 82 | 196 | 2.01e-19 | 93.2 |
| MS.gene49092.t1 | MTR_7g022020 | 32.544 | 169 | 89 | 2 | 832 | 1000 | 2 | 145 | 3.40e-19 | 93.6 |
| MS.gene49092.t1 | MTR_8g470070 | 57.812 | 64 | 27 | 0 | 776 | 839 | 44 | 107 | 3.74e-19 | 84.3 |
| MS.gene49092.t1 | MTR_5g077490 | 46.753 | 77 | 38 | 1 | 223 | 299 | 1 | 74 | 4.92e-15 | 73.9 |
| MS.gene49092.t1 | MTR_8g098915 | 51.389 | 72 | 34 | 1 | 1038 | 1109 | 2 | 72 | 5.94e-15 | 73.2 |
| MS.gene49092.t1 | MTR_8g066430 | 32.381 | 105 | 71 | 0 | 254 | 358 | 3 | 107 | 9.86e-14 | 68.9 |
| MS.gene49092.t1 | MTR_6g051680 | 48.611 | 72 | 36 | 1 | 1039 | 1110 | 3 | 73 | 1.09e-13 | 68.9 |
| MS.gene49092.t1 | MTR_6g049260 | 44.737 | 76 | 41 | 1 | 1038 | 1113 | 2 | 76 | 1.11e-13 | 68.9 |
| MS.gene49092.t1 | MTR_1g106780 | 55.357 | 56 | 25 | 0 | 223 | 278 | 1 | 56 | 1.33e-13 | 69.3 |
| MS.gene49092.t1 | MTR_1g099800 | 48.611 | 72 | 36 | 1 | 1038 | 1109 | 2 | 72 | 4.43e-13 | 67.8 |
| MS.gene49092.t1 | MTR_1g099810 | 48.611 | 72 | 36 | 1 | 1038 | 1109 | 2 | 72 | 7.17e-13 | 67.4 |
| MS.gene49092.t1 | MTR_3g056470 | 53.571 | 56 | 26 | 0 | 223 | 278 | 1 | 56 | 3.11e-12 | 65.1 |
| MS.gene49092.t1 | MTR_6g049320 | 46.154 | 78 | 39 | 2 | 1030 | 1107 | 26 | 100 | 3.90e-12 | 65.9 |
| MS.gene49092.t1 | MTR_1g099640 | 52.778 | 72 | 33 | 1 | 1039 | 1110 | 3 | 73 | 8.43e-12 | 63.9 |
| MS.gene49092.t1 | MTR_3g434960 | 42.105 | 76 | 43 | 1 | 1038 | 1113 | 2 | 76 | 1.17e-11 | 63.2 |
| MS.gene49092.t1 | MTR_6g049280 | 46.377 | 69 | 36 | 1 | 1039 | 1107 | 3 | 70 | 1.43e-11 | 63.2 |
| MS.gene49092.t1 | MTR_7g451210 | 42.667 | 75 | 42 | 1 | 1038 | 1112 | 2 | 75 | 1.54e-11 | 62.8 |
| MS.gene49092.t1 | MTR_6g049280 | 47.143 | 70 | 36 | 1 | 1038 | 1107 | 32 | 100 | 1.65e-11 | 63.9 |
| MS.gene49092.t1 | MTR_3g434890 | 42.105 | 76 | 43 | 1 | 1038 | 1113 | 2 | 76 | 1.78e-11 | 62.4 |
| MS.gene49092.t1 | MTR_3g435000 | 41.538 | 65 | 38 | 0 | 1049 | 1113 | 16 | 80 | 1.88e-11 | 62.4 |
| MS.gene49092.t1 | MTR_7g079110 | 50.000 | 68 | 33 | 1 | 1038 | 1105 | 2 | 68 | 2.28e-11 | 63.9 |
| MS.gene49092.t1 | MTR_6g049320 | 47.826 | 69 | 35 | 1 | 1039 | 1107 | 3 | 70 | 3.07e-11 | 62.4 |
| MS.gene49092.t1 | MTR_0795s0020 | 47.143 | 70 | 30 | 2 | 1038 | 1107 | 2 | 64 | 4.22e-11 | 62.0 |
| MS.gene49092.t1 | MTR_1173s0010 | 40.789 | 76 | 44 | 1 | 1038 | 1113 | 2 | 76 | 5.03e-11 | 61.2 |
| MS.gene49092.t1 | MTR_7g451200 | 40.789 | 76 | 44 | 1 | 1038 | 1113 | 2 | 76 | 5.13e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49092.t1 | AT5G23760 | 86.301 | 73 | 10 | 0 | 1038 | 1110 | 3 | 75 | 1.83e-22 | 93.6 |
| MS.gene49092.t1 | AT5G23760 | 84.375 | 64 | 10 | 0 | 1047 | 1110 | 1 | 64 | 1.09e-16 | 77.0 |
Find 213 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATTAGAGCCTTGCATTT+TGG | 0.129935 | 1.3:-69342775 | None:intergenic |
| TTGGGCTGGTGCCCAGGTTT+TGG | 0.152899 | 1.3:-69343093 | None:intergenic |
| ATTAAGAAAGGGAAAATATT+TGG | 0.176995 | 1.3:+69344160 | MS.gene49092:CDS |
| CATTCTATTTGTTGCTCTAT+TGG | 0.194706 | 1.3:+69345500 | MS.gene49092:CDS |
| GAACAGAAGTTAACAGTTAT+TGG | 0.231458 | 1.3:+69348801 | MS.gene49092:CDS |
| CATGTTTGTGTTTACGTCTA+TGG | 0.236506 | 1.3:+69342978 | MS.gene49092:CDS |
| AAACACAAACATGCTGTTAA+AGG | 0.258620 | 1.3:-69342968 | None:intergenic |
| AACTCAGTATTTGAATTATC+AGG | 0.283374 | 1.3:-69342413 | None:intergenic |
| CATATTCGGGTCTAGAAAAC+TGG | 0.290352 | 1.3:-69345530 | None:intergenic |
| CAGGTTCATCCGTTGATAAA+TGG | 0.290933 | 1.3:-69342394 | None:intergenic |
| TAGAATCATGGCGGTTAAAA+TGG | 0.295495 | 1.3:+69343804 | MS.gene49092:CDS |
| TTATCCCTTCTTCTATATAC+TGG | 0.306325 | 1.3:-69344598 | None:intergenic |
| ATAGCAAAAGGTGGTGTTAA+AGG | 0.319190 | 1.3:+69348568 | MS.gene49092:intron |
| TTTCTAGACCCGAATATGTT+TGG | 0.320518 | 1.3:+69345535 | MS.gene49092:CDS |
| AACCTCTCTTGCTTAATATT+CGG | 0.328830 | 1.3:-69343412 | None:intergenic |
| CGTAAACAAGGGCTTTCAAT+TGG | 0.329372 | 1.3:+69345138 | MS.gene49092:CDS |
| GGAGAGAATTATCATCAAAT+AGG | 0.332386 | 1.3:+69343060 | MS.gene49092:CDS |
| ATCTGAAGTTGCAGCTTTAG+TGG | 0.336126 | 1.3:+69343466 | MS.gene49092:CDS |
| AACAAATAGAATGCGCAAAA+AGG | 0.336693 | 1.3:-69345490 | None:intergenic |
| CTGCAACACATCGAAAATAA+TGG | 0.344731 | 1.3:-69342838 | None:intergenic |
| GACACTATGTTGTGTAAAAT+AGG | 0.345589 | 1.3:-69344448 | None:intergenic |
| ATTGCAGATTATATTGACTT+TGG | 0.345818 | 1.3:+69342733 | MS.gene49092:intron |
| CATGGCGGTTAAAATGGTAT+AGG | 0.352232 | 1.3:+69343810 | MS.gene49092:CDS |
| TTCTAGACCCGAATATGTTT+GGG | 0.352254 | 1.3:+69345536 | MS.gene49092:CDS |
| GGCGAGAAGCTCTCAATTCC+AGG | 0.352804 | 1.3:+69341938 | MS.gene49092:CDS |
| ATGTTTGTGTTTACGTCTAT+GGG | 0.357889 | 1.3:+69342979 | MS.gene49092:CDS |
| GTCAATCCTGCGCCTCTTTG+TGG | 0.360686 | 1.3:-69341709 | None:intergenic |
| ATAGGTTCACGTTCTTTGTT+GGG | 0.362068 | 1.3:-69344430 | None:intergenic |
| CACATCGAAAATAATGGATT+TGG | 0.362798 | 1.3:-69342832 | None:intergenic |
| GGAAGGCATCTGAACATAAA+TGG | 0.365898 | 1.3:+69345109 | MS.gene49092:CDS |
| GCGCAATTCCTTTACAATAG+TGG | 0.374200 | 1.3:-69343300 | None:intergenic |
| TAAGTGAGGTCTCTGGCTTC+AGG | 0.378155 | 1.3:-69345060 | None:intergenic |
| GTGGTATCTACAAATCTCTT+GGG | 0.387138 | 1.3:-69344553 | None:intergenic |
| ACGTTACTAAACTATGTAAC+GGG | 0.390941 | 1.3:+69345324 | MS.gene49092:CDS |
| ATTGATAAAACAAAGAATAA+AGG | 0.392416 | 1.3:+69343009 | MS.gene49092:CDS |
| AATAGGTTCACGTTCTTTGT+TGG | 0.399582 | 1.3:-69344431 | None:intergenic |
| GCAAACTTGGGCTGGTGCCC+AGG | 0.403076 | 1.3:-69343099 | None:intergenic |
| TTGCAGATTATATTGACTTT+GGG | 0.404294 | 1.3:+69342734 | MS.gene49092:intron |
| TTGCTTCGCATTGGGTTTGT+TGG | 0.409362 | 1.3:+69345410 | MS.gene49092:CDS |
| GTTAACAGTTATTGGCGAAA+TGG | 0.409498 | 1.3:+69348809 | MS.gene49092:CDS |
| TATTAACCAAGCAGCTCAAT+GGG | 0.410935 | 1.3:+69345458 | MS.gene49092:CDS |
| GAAGCAGTTGCTGATATCTA+TGG | 0.414404 | 1.3:+69348632 | MS.gene49092:CDS |
| AAAATCGTATGGCAGCTATC+AGG | 0.420223 | 1.3:+69343157 | MS.gene49092:CDS |
| AGATTGAATTTCCATCTAGA+AGG | 0.422801 | 1.3:+69344928 | MS.gene49092:CDS |
| AAGGAGACTTGCTTCGCATT+GGG | 0.423982 | 1.3:+69345402 | MS.gene49092:CDS |
| TATGTACAGTTGAGCAAACT+TGG | 0.425592 | 1.3:-69343112 | None:intergenic |
| GTCGATAAACTTACGCCTCT+TGG | 0.427082 | 1.3:+69341891 | MS.gene49092:CDS |
| GTCAGGGCGGATATGTATAA+AGG | 0.429512 | 1.3:+69343848 | MS.gene49092:CDS |
| CGAAAGTAAAGATGAAAAGA+AGG | 0.429749 | 1.3:+69348929 | MS.gene49092:CDS |
| ATGGCGGTTAAAATGGTATA+GGG | 0.431112 | 1.3:+69343811 | MS.gene49092:CDS |
| ACTTATATCACAAGAATGAT+AGG | 0.431432 | 1.3:+69342914 | MS.gene49092:CDS |
| AGAAGAAGACTCCGGTTGTA+TGG | 0.432147 | 1.3:-69344673 | None:intergenic |
| CCGGTTCCTCGCCTTCTAGA+TGG | 0.432837 | 1.3:-69344939 | None:intergenic |
| TACTTACCATGGTCGTTGTC+AGG | 0.434386 | 1.3:-69342470 | None:intergenic |
| CTCCATCCATGCTATAAACT+TGG | 0.436203 | 1.3:-69345022 | None:intergenic |
| TGAATTGTCTTGTTTAATTG+TGG | 0.437539 | 1.3:-69348082 | None:intergenic |
| TAAGGAGACTTGCTTCGCAT+TGG | 0.438974 | 1.3:+69345401 | MS.gene49092:CDS |
| TGAAACATACAACCTTTGTA+TGG | 0.439944 | 1.3:-69343672 | None:intergenic |
| TTAAGGAAATCAACTAACTC+TGG | 0.440044 | 1.3:-69344055 | None:intergenic |
| GTGAAGAAGCTGAAGAAAGT+AGG | 0.441545 | 1.3:+69348846 | MS.gene49092:CDS |
| GGGTTTGTTGGATGACGATA+AGG | 0.441868 | 1.3:+69345422 | MS.gene49092:CDS |
| GCCTTCCACACAAATTTCAA+TGG | 0.445736 | 1.3:-69345093 | None:intergenic |
| TGAAGAAGCTGAAGAAAGTA+GGG | 0.447970 | 1.3:+69348847 | MS.gene49092:CDS |
| TATGTAATGCGTTCTCATCC+TGG | 0.451013 | 1.3:-69341956 | None:intergenic |
| CTCTCTTTGTTGAATGTAGT+AGG | 0.455267 | 1.3:-69343711 | None:intergenic |
| TCATACAACGGCTGAGGTAA+TGG | 0.460282 | 1.3:-69342892 | None:intergenic |
| CCGGTCTATCAGCTGGTTTG+AGG | 0.462088 | 1.3:-69344087 | None:intergenic |
| TCCATTGAAATTTGTGTGGA+AGG | 0.463563 | 1.3:+69345092 | MS.gene49092:CDS |
| GTAAACAAGGGCTTTCAATT+GGG | 0.464152 | 1.3:+69345139 | MS.gene49092:CDS |
| TGGCGATTTGTGCTTATGTT+GGG | 0.465017 | 1.3:+69343990 | MS.gene49092:CDS |
| ATCATTCTTCCCTGTGACAA+TGG | 0.465062 | 1.3:+69348182 | MS.gene49092:CDS |
| CACAAATCGCCATTGCATCT+TGG | 0.465310 | 1.3:-69343979 | None:intergenic |
| TTTCATTCGATATTAACTAC+AGG | 0.466032 | 1.3:+69344890 | MS.gene49092:CDS |
| CCATCTAGAAGGCGAGGAAC+CGG | 0.467549 | 1.3:+69344939 | MS.gene49092:CDS |
| TTACTCTTCACAGACACAAT+TGG | 0.467595 | 1.3:+69342359 | MS.gene49092:intron |
| TCGTGCTCCACCTACGAACT+TGG | 0.469110 | 1.3:-69343939 | None:intergenic |
| TCGACAGTGGACTACGGTTA+TGG | 0.469196 | 1.3:-69341731 | None:intergenic |
| AGTGGTATCTACAAATCTCT+TGG | 0.471042 | 1.3:-69344554 | None:intergenic |
| TCAAACGAACCTGATCTAAC+AGG | 0.471849 | 1.3:+69342597 | MS.gene49092:CDS |
| TTTCAGCATGCGAGGCTGTA+TGG | 0.473045 | 1.3:+69344860 | MS.gene49092:CDS |
| CACGCAGTATCCGTCTTTGA+CGG | 0.473593 | 1.3:-69345596 | None:intergenic |
| TAAAACTTCTCACCCGATCC+AGG | 0.482014 | 1.3:-69345294 | None:intergenic |
| TTTGAAAGCCACTATTGTAA+AGG | 0.483552 | 1.3:+69343292 | MS.gene49092:CDS |
| CTCAGTTGTGATTGAATATG+TGG | 0.484642 | 1.3:-69341855 | None:intergenic |
| GAAGTTGCAGCTTTAGTGGT+TGG | 0.485526 | 1.3:+69343470 | MS.gene49092:CDS |
| GCGGTGCTAAGAGGTGAAAC+AGG | 0.486059 | 1.3:+69343881 | MS.gene49092:CDS |
| GTTATCCAGTATATAGAAGA+AGG | 0.488114 | 1.3:+69344593 | MS.gene49092:CDS |
| ATCTTGATTTCATCGTATGT+TGG | 0.489026 | 1.3:-69344817 | None:intergenic |
| GATGAGAACGCATTACATAT+AGG | 0.490873 | 1.3:+69341960 | MS.gene49092:CDS |
| GATATGTGGTGCCATACAAC+CGG | 0.492556 | 1.3:+69344662 | MS.gene49092:CDS |
| TATTAACTACAGGGAACCTT+CGG | 0.495601 | 1.3:+69344900 | MS.gene49092:CDS |
| GCAAACTTACCTCTGCAGAC+AGG | 0.495620 | 1.3:-69342008 | None:intergenic |
| TCTTAATTTCTTTCATCAGA+CGG | 0.498593 | 1.3:-69344144 | None:intergenic |
| CATTTACATGCAATCATAAG+TGG | 0.498979 | 1.3:+69344032 | MS.gene49092:CDS |
| AATATTCGGAGTTTAATAGT+TGG | 0.503037 | 1.3:-69343398 | None:intergenic |
| ATGGCGATTTGTGCTTATGT+TGG | 0.504547 | 1.3:+69343989 | MS.gene49092:CDS |
| CTGATGAAAGAAATTAAGAA+AGG | 0.505073 | 1.3:+69344148 | MS.gene49092:CDS |
| CAGTACCCCATTGAGCTGCT+TGG | 0.506098 | 1.3:-69345464 | None:intergenic |
| GCACCACATATCTGTTATCA+AGG | 0.507338 | 1.3:-69344651 | None:intergenic |
| GTATTAACCAAGCAGCTCAA+TGG | 0.509533 | 1.3:+69345457 | MS.gene49092:CDS |
| AAGGTAGATATAATATCAGT+TGG | 0.509973 | 1.3:+69348870 | MS.gene49092:CDS |
| ATTGTGGTTGAAAAGCAGTC+TGG | 0.514027 | 1.3:+69343524 | MS.gene49092:CDS |
| AACTTGGTATCTCTAATATG+TGG | 0.514617 | 1.3:-69345006 | None:intergenic |
| GGAAGTTTGATCCCAAAACC+TGG | 0.515262 | 1.3:+69343081 | MS.gene49092:CDS |
| CAAATCTGACCTGTTAGATC+AGG | 0.517048 | 1.3:-69342606 | None:intergenic |
| CTTCCCTGTGACAATGGCTC+AGG | 0.517352 | 1.3:+69348188 | MS.gene49092:CDS |
| TACCAAGTTTATAGCATGGA+TGG | 0.517666 | 1.3:+69345020 | MS.gene49092:CDS |
| CATACCTGAGCCATTGTCAC+AGG | 0.520416 | 1.3:-69348192 | None:intergenic |
| CCTCAAACCAGCTGATAGAC+CGG | 0.522559 | 1.3:+69344087 | MS.gene49092:CDS |
| TTGTATGAAGCGGTGCTAAG+AGG | 0.527092 | 1.3:+69343872 | MS.gene49092:CDS |
| AACGAAGGCTTGAGAAGTTG+TGG | 0.532801 | 1.3:-69348139 | None:intergenic |
| AAATGGACACCACGTAAACA+AGG | 0.535198 | 1.3:+69345126 | MS.gene49092:CDS |
| CTTATAGCATGATAGAATCA+TGG | 0.535448 | 1.3:+69343792 | MS.gene49092:CDS |
| GAGTTGATGTGCAACGAGAA+TGG | 0.535709 | 1.3:+69342431 | MS.gene49092:CDS |
| CCCACCAGTTGAATATGACT+CGG | 0.537254 | 1.3:+69342563 | MS.gene49092:intron |
| AAATTCAATCTTTCAACCGA+AGG | 0.539398 | 1.3:-69344916 | None:intergenic |
| ATGTCTTAAGCCGTCAAAGA+CGG | 0.544751 | 1.3:+69345586 | MS.gene49092:CDS |
| GACGTTACTAAACTATGTAA+CGG | 0.548429 | 1.3:+69345323 | MS.gene49092:CDS |
| GAGATACCAAGTTTATAGCA+TGG | 0.550438 | 1.3:+69345016 | MS.gene49092:CDS |
| TGATGAAAGAAATTAAGAAA+GGG | 0.553491 | 1.3:+69344149 | MS.gene49092:CDS |
| CTCACTATAAGTGAGGTCTC+TGG | 0.553837 | 1.3:-69345067 | None:intergenic |
| GAAACAGGTCCAGCAACAGC+AGG | 0.554651 | 1.3:+69343896 | MS.gene49092:CDS |
| GAAGCTGAAGAAAGTAGGGA+AGG | 0.555805 | 1.3:+69348851 | MS.gene49092:CDS |
| TTAAGCAAGAGAGGTTATGA+TGG | 0.556584 | 1.3:+69343419 | MS.gene49092:CDS |
| GGCGTAAGTTTATCGACACC+AGG | 0.558919 | 1.3:-69341885 | None:intergenic |
| CAAACTTACCTCTGCAGACA+GGG | 0.562582 | 1.3:-69342007 | None:intergenic |
| ACCACTGTTATTGACTCAGA+TGG | 0.566457 | 1.3:+69344571 | MS.gene49092:CDS |
| ACGCACACATTAATGTTGAG+TGG | 0.568581 | 1.3:+69344704 | MS.gene49092:CDS |
| GTTTGTGTTTACGTCTATGG+GGG | 0.571120 | 1.3:+69342981 | MS.gene49092:CDS |
| ATATTTGGAAAAGTTCGAGC+AGG | 0.571711 | 1.3:+69344175 | MS.gene49092:CDS |
| ACAAAGTCCGGTCTATCAGC+TGG | 0.572475 | 1.3:-69344094 | None:intergenic |
| TGTATGTTTCAATGAAAGAG+TGG | 0.573133 | 1.3:+69343684 | MS.gene49092:CDS |
| ATTGAAAGCCCTTGTTTACG+TGG | 0.573178 | 1.3:-69345135 | None:intergenic |
| AAACTTACGCCTCTTGGCCC+TGG | 0.573473 | 1.3:+69341897 | MS.gene49092:CDS |
| TCACAACTGAGACACAATCC+TGG | 0.575116 | 1.3:+69341867 | MS.gene49092:CDS |
| AATAACCGTGACACAAAGTC+CGG | 0.576659 | 1.3:-69344106 | None:intergenic |
| CTCCGAATATTAAGCAAGAG+AGG | 0.576976 | 1.3:+69343410 | MS.gene49092:CDS |
| GTGTTACCATCCAAGTTCGT+AGG | 0.578924 | 1.3:+69343929 | MS.gene49092:CDS |
| TGGAAACCACAAAGAGGCGC+AGG | 0.580389 | 1.3:+69341703 | MS.gene49092:CDS |
| ATTCCTTGATAACAGATATG+TGG | 0.581376 | 1.3:+69344648 | MS.gene49092:CDS |
| GTGTCGACTCTTATGATGCA+TGG | 0.583422 | 1.3:+69344466 | MS.gene49092:CDS |
| ATACAGCCTCGCATGCTGAA+AGG | 0.585833 | 1.3:-69344858 | None:intergenic |
| GTATATAGAAGAAGGGATAA+CGG | 0.586654 | 1.3:+69344601 | MS.gene49092:CDS |
| AGACGGATACTGCGTGTGCA+AGG | 0.586756 | 1.3:+69345603 | MS.gene49092:CDS |
| GATTAAATGCCCAAAATGCA+AGG | 0.588929 | 1.3:+69342765 | MS.gene49092:CDS |
| TCAAAATTACCAAGATGCAA+TGG | 0.589505 | 1.3:+69343970 | MS.gene49092:CDS |
| TTCATTCGATATTAACTACA+GGG | 0.589876 | 1.3:+69344891 | MS.gene49092:CDS |
| AACAAGGGCTTTCAATTGGG+AGG | 0.591843 | 1.3:+69345142 | MS.gene49092:CDS |
| CACTTACCGTCGATCGTACA+CGG | 0.595241 | 1.3:-69344517 | None:intergenic |
| TCTCCTCTAGAAAATATCAA+AGG | 0.595478 | 1.3:-69343599 | None:intergenic |
| TAGGTTCACGTTCTTTGTTG+GGG | 0.597819 | 1.3:-69344429 | None:intergenic |
| AGGTTCGTTTGAGACTTCAT+CGG | 0.602082 | 1.3:-69342586 | None:intergenic |
| ACTATAGAATTTCAGAAGCG+AGG | 0.603291 | 1.3:+69344316 | MS.gene49092:CDS |
| GGAGATTATGACGCATCCGA+GGG | 0.603477 | 1.3:+69343491 | MS.gene49092:CDS |
| TGTTTGTGTTTACGTCTATG+GGG | 0.603640 | 1.3:+69342980 | MS.gene49092:CDS |
| GAATTTCCATCTAGAAGGCG+AGG | 0.607791 | 1.3:+69344933 | MS.gene49092:CDS |
| GCTCCACCTACGAACTTGGA+TGG | 0.610113 | 1.3:-69343935 | None:intergenic |
| TCGATACCTTTCAGCATGCG+AGG | 0.610350 | 1.3:+69344852 | MS.gene49092:CDS |
| TTACCATCCAAGTTCGTAGG+TGG | 0.611830 | 1.3:+69343932 | MS.gene49092:CDS |
| CCTTCTCGTTGACTCCCACA+TGG | 0.612095 | 1.3:-69344490 | None:intergenic |
| TGATGTTCGACAGTGGACTA+CGG | 0.613396 | 1.3:-69341737 | None:intergenic |
| ACAGTTGAGCAAACTTGGGC+TGG | 0.614428 | 1.3:-69343107 | None:intergenic |
| TGGAGATTATGACGCATCCG+AGG | 0.616529 | 1.3:+69343490 | MS.gene49092:CDS |
| AACACTAAAATATGCGCGTG+TGG | 0.618089 | 1.3:-69344343 | None:intergenic |
| TAAACTTTAGAAGAAGACTC+CGG | 0.618316 | 1.3:-69344681 | None:intergenic |
| TATAAGTCATACAACGGCTG+AGG | 0.619185 | 1.3:-69342898 | None:intergenic |
| GCTGCAACTTCAGATGCTGT+AGG | 0.619299 | 1.3:-69343458 | None:intergenic |
| TATGAATGTCCATTTATCAA+CGG | 0.619453 | 1.3:+69342385 | MS.gene49092:CDS |
| TTTGTGTTTACGTCTATGGG+GGG | 0.622816 | 1.3:+69342982 | MS.gene49092:CDS |
| CTCTAATGTGGTATGATGAG+AGG | 0.623333 | 1.3:+69342788 | MS.gene49092:CDS |
| ATGTACAGTTGAGCAAACTT+GGG | 0.625118 | 1.3:-69343111 | None:intergenic |
| TTATTCAAATATGTCAACAA+AGG | 0.626806 | 1.3:+69344754 | MS.gene49092:CDS |
| ATAAAACAAAGAATAAAGGT+AGG | 0.627588 | 1.3:+69343013 | MS.gene49092:CDS |
| TCTAGAAGGCGAGGAACCGG+TGG | 0.633244 | 1.3:+69344942 | MS.gene49092:CDS |
| ATATTCGGGTCTAGAAAACT+GGG | 0.635109 | 1.3:-69345529 | None:intergenic |
| GGAAGAATGATGTGAAAACA+AGG | 0.635870 | 1.3:-69348170 | None:intergenic |
| TGGTATCTACAAATCTCTTG+GGG | 0.635902 | 1.3:-69344552 | None:intergenic |
| CTTATGATGCATGGTCCATG+TGG | 0.639859 | 1.3:+69344475 | MS.gene49092:CDS |
| AATATCAAAGGATATTGCAG+TGG | 0.640289 | 1.3:-69343587 | None:intergenic |
| CAAAATGCAAGGCTCTAATG+TGG | 0.641807 | 1.3:+69342776 | MS.gene49092:CDS |
| TTGAGCGACCCTGTCTGCAG+AGG | 0.644133 | 1.3:+69341999 | MS.gene49092:CDS |
| AGAGATTGATCAATCAACAC+TGG | 0.644522 | 1.3:+69343730 | MS.gene49092:CDS |
| TTACGATGATATCAAAACTG+TGG | 0.645521 | 1.3:+69345356 | MS.gene49092:CDS |
| TTATCCAGTATATAGAAGAA+GGG | 0.647532 | 1.3:+69344594 | MS.gene49092:CDS |
| GATGTTCCTGACAACGACCA+TGG | 0.648098 | 1.3:+69342464 | MS.gene49092:CDS |
| TCTAATGTGGTATGATGAGA+GGG | 0.649212 | 1.3:+69342789 | MS.gene49092:CDS |
| AGTTTCCATTGAAATTTGTG+TGG | 0.651554 | 1.3:+69345088 | MS.gene49092:CDS |
| GGATGCACACAGCGAAACTG+AGG | 0.651670 | 1.3:-69344373 | None:intergenic |
| ATACCTGAGCCATTGTCACA+GGG | 0.655527 | 1.3:-69348191 | None:intergenic |
| ATGGAAACTCACTATAAGTG+AGG | 0.656664 | 1.3:-69345074 | None:intergenic |
| ACATGTCTACCAGGGCCAAG+AGG | 0.658019 | 1.3:-69341906 | None:intergenic |
| TATTGCAGTGGCAAGTACGA+CGG | 0.661315 | 1.3:-69343575 | None:intergenic |
| CCATGTGGGAGTCAACGAGA+AGG | 0.661933 | 1.3:+69344490 | MS.gene49092:CDS |
| GAAGTTTGATCCCAAAACCT+GGG | 0.663048 | 1.3:+69343082 | MS.gene49092:CDS |
| CAAGTTTATAGCATGGATGG+AGG | 0.665574 | 1.3:+69345023 | MS.gene49092:CDS |
| TCATTAGTGATGTTCGACAG+TGG | 0.668254 | 1.3:-69341744 | None:intergenic |
| ATAGACCGGACTTTGTGTCA+CGG | 0.668718 | 1.3:+69344101 | MS.gene49092:CDS |
| TTGTGATATAAGTCATACAA+CGG | 0.670116 | 1.3:-69342904 | None:intergenic |
| GGTTCACCGTGTACGATCGA+CGG | 0.671789 | 1.3:+69344511 | MS.gene49092:CDS |
| AACAAGGAAGATGAGAACGA+AGG | 0.675087 | 1.3:-69348154 | None:intergenic |
| ACAATATAAGGTAAGGCGTG+CGG | 0.680766 | 1.3:-69348108 | None:intergenic |
| AATGGACACCACGTAAACAA+GGG | 0.681202 | 1.3:+69345127 | MS.gene49092:CDS |
| ACTGGATCCATAGCAAAAGG+TGG | 0.684112 | 1.3:+69348559 | MS.gene49092:intron |
| GTATAAAGGATTGTATGAAG+CGG | 0.687529 | 1.3:+69343862 | MS.gene49092:CDS |
| ACCATCTGAGTCAATAACAG+TGG | 0.692666 | 1.3:-69344572 | None:intergenic |
| AGATTATGACGCATCCGAGG+GGG | 0.694582 | 1.3:+69343493 | MS.gene49092:CDS |
| CGTTACTAAACTATGTAACG+GGG | 0.696315 | 1.3:+69345325 | MS.gene49092:CDS |
| GTACAATGGAAACCACAAAG+AGG | 0.697174 | 1.3:+69341697 | None:intergenic |
| TTATGATGCATGGTCCATGT+GGG | 0.710218 | 1.3:+69344476 | MS.gene49092:CDS |
| GAGATTATGACGCATCCGAG+GGG | 0.711865 | 1.3:+69343492 | MS.gene49092:CDS |
| AACTTCTCACCCGATCCAGG+CGG | 0.726972 | 1.3:-69345291 | None:intergenic |
| ATTAACCAAGCAGCTCAATG+GGG | 0.761444 | 1.3:+69345459 | MS.gene49092:CDS |
| ATAGCATGATAGAATCATGG+CGG | 0.799609 | 1.3:+69343795 | MS.gene49092:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 69341702 | 69348989 | 69341702 | ID=MS.gene49092 |
| chr1.3 | mRNA | 69341702 | 69348989 | 69341702 | ID=MS.gene49092.t1;Parent=MS.gene49092 |
| chr1.3 | exon | 69341702 | 69341774 | 69341702 | ID=MS.gene49092.t1.exon1;Parent=MS.gene49092.t1 |
| chr1.3 | CDS | 69341702 | 69341774 | 69341702 | ID=cds.MS.gene49092.t1;Parent=MS.gene49092.t1 |
| chr1.3 | exon | 69341847 | 69342020 | 69341847 | ID=MS.gene49092.t1.exon2;Parent=MS.gene49092.t1 |
| chr1.3 | CDS | 69341847 | 69342020 | 69341847 | ID=cds.MS.gene49092.t1;Parent=MS.gene49092.t1 |
| chr1.3 | exon | 69342372 | 69342485 | 69342372 | ID=MS.gene49092.t1.exon3;Parent=MS.gene49092.t1 |
| chr1.3 | CDS | 69342372 | 69342485 | 69342372 | ID=cds.MS.gene49092.t1;Parent=MS.gene49092.t1 |
| chr1.3 | exon | 69342571 | 69342618 | 69342571 | ID=MS.gene49092.t1.exon4;Parent=MS.gene49092.t1 |
| chr1.3 | CDS | 69342571 | 69342618 | 69342571 | ID=cds.MS.gene49092.t1;Parent=MS.gene49092.t1 |
| chr1.3 | exon | 69342740 | 69343178 | 69342740 | ID=MS.gene49092.t1.exon5;Parent=MS.gene49092.t1 |
| chr1.3 | CDS | 69342740 | 69343178 | 69342740 | ID=cds.MS.gene49092.t1;Parent=MS.gene49092.t1 |
| chr1.3 | exon | 69343271 | 69344196 | 69343271 | ID=MS.gene49092.t1.exon6;Parent=MS.gene49092.t1 |
| chr1.3 | CDS | 69343271 | 69344196 | 69343271 | ID=cds.MS.gene49092.t1;Parent=MS.gene49092.t1 |
| chr1.3 | exon | 69344308 | 69345163 | 69344308 | ID=MS.gene49092.t1.exon7;Parent=MS.gene49092.t1 |
| chr1.3 | CDS | 69344308 | 69345163 | 69344308 | ID=cds.MS.gene49092.t1;Parent=MS.gene49092.t1 |
| chr1.3 | exon | 69345278 | 69345624 | 69345278 | ID=MS.gene49092.t1.exon8;Parent=MS.gene49092.t1 |
| chr1.3 | CDS | 69345278 | 69345624 | 69345278 | ID=cds.MS.gene49092.t1;Parent=MS.gene49092.t1 |
| chr1.3 | exon | 69348076 | 69348209 | 69348076 | ID=MS.gene49092.t1.exon9;Parent=MS.gene49092.t1 |
| chr1.3 | CDS | 69348076 | 69348209 | 69348076 | ID=cds.MS.gene49092.t1;Parent=MS.gene49092.t1 |
| chr1.3 | exon | 69348572 | 69348653 | 69348572 | ID=MS.gene49092.t1.exon10;Parent=MS.gene49092.t1 |
| chr1.3 | CDS | 69348572 | 69348653 | 69348572 | ID=cds.MS.gene49092.t1;Parent=MS.gene49092.t1 |
| chr1.3 | exon | 69348772 | 69348989 | 69348772 | ID=MS.gene49092.t1.exon11;Parent=MS.gene49092.t1 |
| chr1.3 | CDS | 69348772 | 69348989 | 69348772 | ID=cds.MS.gene49092.t1;Parent=MS.gene49092.t1 |
| Gene Sequence |
| Protein sequence |
