AlfalfaGEDB | MS.gene004899

M. sativa cultivar XinJiangDaYe / MS.gene004899

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene004899.t1	XP_013468780.1	100	150	0	0	1	150	1	150	1.30E-48	202.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene004899.t1	Q0JNL7	83.0	147	25	0	1	147	1	147	5.1e-38	158.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene004899.t1	A0A072VLW5	100.0	150	0	0	1	150	1	150	9.3e-49	202.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene004899	MS.gene022455	PPI
MS.gene004899	MS.gene63000	PPI
MS.gene004899	MS.gene93087	PPI
MS.gene004899	MS.gene046988	PPI
MS.gene004899	MS.gene74452	PPI
MS.gene004899	MS.gene09934	PPI
MS.gene038456	MS.gene004899	PPI
MS.gene004899	MS.gene54637	PPI
MS.gene004899	MS.gene58906	PPI
MS.gene004899	MS.gene79028	PPI
MS.gene004899	MS.gene64311	PPI
MS.gene004899	MS.gene49271	PPI
MS.gene004899	MS.gene026940	PPI
MS.gene004899	MS.gene000724	PPI
MS.gene004899	MS.gene65954	PPI
MS.gene004899	MS.gene98295	PPI
MS.gene004899	MS.gene022456	PPI
MS.gene004899	MS.gene64327	PPI
MS.gene004899	MS.gene62258	PPI
MS.gene004899	MS.gene28338	PPI
MS.gene004899	MS.gene041795	PPI
MS.gene004899	MS.gene96922	PPI
MS.gene004899	MS.gene64324	PPI
MS.gene004899	MS.gene55496	PPI
MS.gene004899	MS.gene025797	PPI
MS.gene004899	MS.gene21931	PPI
MS.gene004899	MS.gene27516	PPI
MS.gene004899	MS.gene64314	PPI
MS.gene004899	MS.gene040127	PPI
MS.gene004899	MS.gene09960	PPI
MS.gene004899	MS.gene011400	PPI
MS.gene004899	MS.gene94551	PPI
MS.gene68345	MS.gene004899	PPI
MS.gene004899	MS.gene62540	PPI
MS.gene004899	MS.gene074100	PPI
MS.gene004899	MS.gene53650	PPI
MS.gene62258	MS.gene004899	PPI
MS.gene004899	MS.gene02545	PPI
MS.gene004899	MS.gene04915	PPI
MS.gene004899	MS.gene61009	PPI
MS.gene004899	MS.gene35563	PPI
MS.gene004899	MS.gene057167	PPI
MS.gene004899	MS.gene93763	PPI
MS.gene004899	MS.gene49270	PPI
MS.gene004899	MS.gene64307	PPI
MS.gene004899	MS.gene024717	PPI
MS.gene004899	MS.gene29794	PPI
MS.gene58860	MS.gene004899	PPI
MS.gene004899	MS.gene71511	PPI
MS.gene004899	MS.gene033361	PPI
MS.gene004899	MS.gene87673	PPI
MS.gene004899	MS.gene53659	PPI
MS.gene04917	MS.gene004899	PPI
MS.gene004899	MS.gene061768	PPI
MS.gene004899	MS.gene89216	PPI
MS.gene004899	MS.gene64308	PPI
MS.gene004899	MS.gene009021	PPI
MS.gene004899	MS.gene47195	PPI
MS.gene004899	MS.gene47134	PPI
MS.gene004899	MS.gene017446	PPI
MS.gene004899	MS.gene96914	PPI
MS.gene004899	MS.gene96913	PPI
MS.gene004899	MS.gene64316	PPI
MS.gene004899	MS.gene64313	PPI
MS.gene004899	MS.gene061261	PPI
MS.gene004899	MS.gene036930	PPI
MS.gene004899	MS.gene21932	PPI
MS.gene004899	MS.gene026618	PPI
MS.gene004899	MS.gene98294	PPI
MS.gene004899	MS.gene53648	PPI
MS.gene004899	MS.gene015470	PPI
MS.gene004899	MS.gene008831	PPI
MS.gene004899	MS.gene55545	PPI
MS.gene003880	MS.gene004899	PPI
MS.gene004899	MS.gene056461	PPI
MS.gene004899	MS.gene64310	PPI
MS.gene004899	MS.gene29459	PPI
MS.gene004899	MS.gene71207	PPI
MS.gene004899	MS.gene35562	PPI
MS.gene004899	MS.gene92775	PPI
MS.gene46886	MS.gene004899	PPI
MS.gene004899	MS.gene21155	PPI
MS.gene004899	MS.gene53662	PPI
MS.gene004899	MS.gene63281	PPI
MS.gene004899	MS.gene060446	PPI
MS.gene004899	MS.gene68345	PPI
MS.gene004899	MS.gene013748	PPI
MS.gene004899	MS.gene008225	PPI
MS.gene004899	MS.gene97948	PPI
MS.gene004899	MS.gene21696	PPI
MS.gene004899	MS.gene29793	PPI
MS.gene004899	MS.gene05284	PPI
MS.gene004899	MS.gene22553	PPI
MS.gene004899	MS.gene074045	PPI
MS.gene004899	MS.gene03228	PPI
MS.gene64324	MS.gene004899	PPI
MS.gene004899	MS.gene000738	PPI
MS.gene004899	MS.gene04917	PPI
MS.gene004899	MS.gene46237	PPI
MS.gene004899	MS.gene056383	PPI
MS.gene004899	MS.gene64317	PPI
MS.gene004899	MS.gene025777	PPI
MS.gene004899	MS.gene040331	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene004899.t1	MTR_1g076650	100.000	150	0	0	1	150	1	150	7.50e-106	298
MS.gene004899.t1	MTR_1g041285	86.577	149	20	0	1	149	1	149	1.58e-91	262
MS.gene004899.t1	MTR_5g088320	78.378	148	32	0	1	148	1	148	1.29e-83	242
MS.gene004899.t1	MTR_5g088320	45.070	71	36	1	6	76	82	149	2.68e-11	58.2
MS.gene004899.t1	MTR_6g025320	77.703	148	33	0	1	148	1	148	5.62e-83	241
MS.gene004899.t1	MTR_6g025320	45.070	71	36	1	6	76	82	149	2.85e-11	58.2
MS.gene004899.t1	MTR_7g087610	77.703	148	33	0	1	148	1	148	2.94e-82	239
MS.gene004899.t1	MTR_7g087610	46.479	71	35	1	6	76	82	149	4.69e-12	60.5
MS.gene004899.t1	MTR_0168s0120	79.464	112	23	0	37	148	1	112	7.72e-63	188
MS.gene004899.t1	MTR_0168s0120	45.070	71	36	1	6	76	46	113	8.09e-12	58.9
MS.gene004899.t1	MTR_6g025320	79.464	112	23	0	37	148	1	112	7.72e-63	188
MS.gene004899.t1	MTR_6g025320	45.070	71	36	1	6	76	46	113	8.09e-12	58.9
MS.gene004899.t1	MTR_7g115040	68.456	149	47	0	1	149	1	149	3.03e-62	188
MS.gene004899.t1	MTR_1g071150	58.503	147	60	1	1	147	1	146	2.08e-58	178
MS.gene004899.t1	MTR_8g066630	44.898	147	78	1	5	148	10	156	1.41e-40	134
MS.gene004899.t1	MTR_7g074020	43.836	146	82	0	3	148	21	166	5.00e-39	130
MS.gene004899.t1	MTR_1g032070	49.265	136	69	0	12	147	46	181	5.46e-38	128
MS.gene004899.t1	MTR_1g032070	41.935	62	36	0	84	145	45	106	2.04e-11	59.7
MS.gene004899.t1	MTR_5g011850	40.541	148	86	1	1	148	1	146	6.88e-38	126
MS.gene004899.t1	MTR_6g007613	42.361	144	83	0	3	146	20	163	1.17e-36	124
MS.gene004899.t1	MTR_6g007613	43.836	73	41	0	74	146	18	90	7.16e-13	62.8
MS.gene004899.t1	MTR_4g112460	43.056	144	74	2	8	146	7	147	9.96e-36	121
MS.gene004899.t1	MTR_4g112460	37.778	90	53	1	4	93	81	167	2.66e-12	61.2
MS.gene004899.t1	MTR_7g074020	43.077	130	74	0	3	132	21	150	7.22e-34	116
MS.gene004899.t1	MTR_7g074020	47.619	63	33	0	84	146	29	91	9.05e-13	62.4
MS.gene004899.t1	MTR_3g055570	45.000	140	62	1	5	144	45	169	2.67e-32	113
MS.gene004899.t1	MTR_8g105230	45.802	131	71	0	12	142	36	166	3.07e-32	113
MS.gene004899.t1	MTR_8g105230	51.562	64	31	0	6	69	103	166	5.28e-14	66.2
MS.gene004899.t1	MTR_8g107110	47.015	134	70	1	13	146	25	157	3.13e-32	112
MS.gene004899.t1	MTR_6g007613	41.538	130	76	0	3	132	20	149	6.14e-32	111
MS.gene004899.t1	MTR_6g007613	43.836	73	41	0	74	146	18	90	4.50e-13	63.2
MS.gene004899.t1	MTR_8g069915	39.189	148	88	1	1	146	1	148	2.54e-31	110
MS.gene004899.t1	MTR_8g069915	36.842	76	45	1	4	79	82	154	2.28e-11	58.9
MS.gene004899.t1	MTR_5g079340	43.609	133	74	1	14	146	6	137	2.72e-30	107
MS.gene004899.t1	MTR_6g079570	45.185	135	72	2	13	146	27	160	1.70e-29	105
MS.gene004899.t1	MTR_6g079570	45.455	66	36	0	13	78	100	165	1.26e-12	62.4
MS.gene004899.t1	MTR_1g046950	42.222	135	76	1	14	146	6	140	2.57e-29	104
MS.gene004899.t1	MTR_1g046950	44.444	63	35	0	13	75	80	142	3.18e-11	57.8
MS.gene004899.t1	MTR_4g067270	41.606	137	78	1	12	146	5	141	7.30e-29	103
MS.gene004899.t1	MTR_3g055520	42.069	145	69	1	1	145	41	170	1.19e-28	103
MS.gene004899.t1	MTR_7g090450	43.972	141	74	3	11	146	72	212	1.64e-28	104
MS.gene004899.t1	MTR_1g047100	40.441	136	80	1	14	148	6	141	1.20e-27	100
MS.gene004899.t1	MTR_3g067610	45.113	133	69	2	14	146	7	135	1.45e-27	100
MS.gene004899.t1	MTR_3g067610	46.667	60	32	0	83	142	3	62	2.65e-11	58.2
MS.gene004899.t1	MTR_7g106710	41.781	146	82	2	1	146	429	571	2.66e-27	106
MS.gene004899.t1	MTR_3g055585	42.069	145	69	1	1	145	41	170	2.93e-27	100
MS.gene004899.t1	MTR_8g036075	42.254	142	74	3	13	146	50	191	2.40e-26	98.6
MS.gene004899.t1	MTR_1g055255	39.041	146	86	2	1	146	418	560	5.76e-26	102
MS.gene004899.t1	MTR_1g096490	41.892	148	79	3	1	146	324	466	1.16e-25	101
MS.gene004899.t1	MTR_4g115170	39.869	153	74	2	12	146	64	216	1.16e-25	97.4
MS.gene004899.t1	MTR_4g115170	49.275	69	33	1	7	73	148	216	3.00e-11	59.3
MS.gene004899.t1	MTR_7g075040	39.860	143	77	3	13	146	48	190	4.87e-25	95.1
MS.gene004899.t1	MTR_8g095440	39.041	146	86	2	1	146	324	466	1.04e-24	99.0
MS.gene004899.t1	MTR_3g098070	38.356	146	87	2	1	146	323	465	1.11e-24	98.6
MS.gene004899.t1	MTR_7g068710	37.838	148	91	1	1	148	350	496	1.36e-24	98.6
MS.gene004899.t1	MTR_0028s0170	37.838	148	86	3	1	146	372	515	1.74e-24	98.2
MS.gene004899.t1	MTR_0028s0170	38.095	84	49	1	67	147	362	445	3.24e-11	60.5
MS.gene004899.t1	MTR_5g089320	37.162	148	87	3	1	146	362	505	3.27e-24	97.4
MS.gene004899.t1	MTR_7g089760	43.939	132	72	1	17	146	10	141	3.88e-24	91.7
MS.gene004899.t1	MTR_8g099095	37.162	148	87	3	1	146	360	503	4.35e-24	97.1
MS.gene004899.t1	MTR_1g041150	37.671	146	88	2	1	146	412	554	8.39e-24	96.7
MS.gene004899.t1	MTR_3g098090	36.986	146	89	2	1	146	326	468	1.18e-23	95.9
MS.gene004899.t1	MTR_5g009830	36.486	148	88	3	1	146	360	503	1.23e-23	95.9
MS.gene004899.t1	MTR_4g132070	36.242	149	91	3	1	148	385	530	2.68e-23	95.1
MS.gene004899.t1	MTR_4g107490	38.000	150	88	4	1	148	367	513	2.77e-23	95.1
MS.gene004899.t1	MTR_5g099240	36.986	146	89	2	1	146	318	460	2.80e-23	94.7
MS.gene004899.t1	MTR_5g092810	36.913	149	90	3	1	148	386	531	3.59e-23	94.7
MS.gene004899.t1	MTR_5g099240	36.986	146	89	2	1	146	390	532	3.63e-23	94.7
MS.gene004899.t1	MTR_3g055490	54.930	71	32	0	5	75	45	115	5.37e-23	87.8
MS.gene004899.t1	MTR_3g089070	35.252	139	79	2	13	146	7	139	1.53e-22	87.4
MS.gene004899.t1	MTR_3g089090	35.252	139	79	2	13	146	6	138	1.56e-22	87.0
MS.gene004899.t1	MTR_1g054865	36.301	146	90	2	1	146	455	597	3.11e-22	92.0
MS.gene004899.t1	MTR_5g017550	37.681	138	79	2	14	148	50	183	4.88e-22	87.4
MS.gene004899.t1	MTR_1g026190	35.374	147	91	3	1	146	376	519	6.45e-22	90.9
MS.gene004899.t1	MTR_4g086260	36.842	133	82	1	14	146	59	189	1.12e-21	86.7
MS.gene004899.t1	MTR_6g023460	32.857	140	93	1	8	147	4	142	3.22e-21	84.0
MS.gene004899.t1	MTR_6g023460	40.299	67	40	0	7	73	75	141	9.19e-12	59.3
MS.gene004899.t1	MTR_5g027000	34.328	134	88	0	9	142	19	152	3.23e-21	84.3
MS.gene004899.t1	MTR_5g017510	36.691	139	80	3	14	148	50	184	6.20e-21	84.3
MS.gene004899.t1	MTR_5g017560	36.691	139	80	3	14	148	50	184	6.20e-21	84.3
MS.gene004899.t1	MTR_4g103630	35.714	140	81	2	11	146	5	139	6.30e-21	83.2
MS.gene004899.t1	MTR_3g051770	35.256	156	90	3	1	148	377	529	1.71e-20	87.0
MS.gene004899.t1	MTR_4g103650	35.000	140	82	2	11	146	1	135	2.10e-20	81.6
MS.gene004899.t1	MTR_7g074240	37.162	148	81	2	13	148	25	172	3.95e-20	82.0
MS.gene004899.t1	MTR_4g066660	35.417	144	91	2	5	148	370	511	4.28e-20	85.9
MS.gene004899.t1	MTR_7g106710	39.394	132	77	2	1	132	429	557	8.59e-20	85.1
MS.gene004899.t1	MTR_2g098890	38.849	139	81	2	12	146	64	202	3.59e-19	80.5
MS.gene004899.t1	MTR_4g132040	34.014	147	92	4	1	146	390	532	4.33e-19	82.8
MS.gene004899.t1	MTR_4g103655	33.571	140	84	2	11	146	5	139	6.09e-19	78.2
MS.gene004899.t1	MTR_8g078270	34.815	135	86	2	13	146	54	187	9.34e-19	78.6
MS.gene004899.t1	MTR_8g078270	50.000	64	32	0	83	146	51	114	3.80e-13	63.9
MS.gene004899.t1	MTR_7g091890	32.432	148	95	2	1	146	352	496	7.14e-18	79.3
MS.gene004899.t1	MTR_3g055480	57.407	54	23	0	93	146	53	106	2.87e-17	73.2
MS.gene004899.t1	MTR_3g055480	41.333	75	37	1	1	75	41	108	7.53e-12	58.9
MS.gene004899.t1	MTR_5g008705	31.250	128	88	0	19	146	1	128	1.22e-16	71.6
MS.gene004899.t1	MTR_3g055510	49.180	61	31	0	84	144	71	131	7.53e-16	70.1
MS.gene004899.t1	MTR_1g052530	28.767	146	103	1	1	146	346	490	1.01e-15	73.2
MS.gene004899.t1	MTR_3g083470	31.298	131	80	1	17	147	98	218	3.84e-15	70.1
MS.gene004899.t1	MTR_3g083470	45.588	68	37	0	6	73	150	217	9.21e-13	63.5
MS.gene004899.t1	MTR_4g122260	27.703	148	103	2	3	146	7	154	9.48e-15	67.8
MS.gene004899.t1	MTR_5g022030	27.922	154	99	5	1	148	395	542	2.07e-14	69.7
MS.gene004899.t1	MTR_5g008695	34.513	113	70	3	36	145	1	112	9.36e-14	63.9
MS.gene004899.t1	MTR_5g089440	33.333	129	74	4	23	146	55	176	9.21e-13	63.2
MS.gene004899.t1	MTR_3g088655	28.947	152	90	3	11	147	7	155	2.27e-12	61.2
MS.gene004899.t1	MTR_8g099575	33.594	128	72	3	25	142	49	173	4.52e-12	61.6
MS.gene004899.t1	MTR_2g104130	27.517	149	94	5	3	146	22	161	1.53e-11	59.3
MS.gene004899.t1	MTR_1g030440	32.624	141	79	4	17	147	27	161	3.18e-11	58.5
MS.gene004899.t1	MTR_8g096050	25.490	153	102	3	1	147	38	184	6.41e-11	59.7
MS.gene004899.t1	MTR_4g082050	40.541	74	44	0	73	146	65	138	6.42e-11	57.0
MS.gene004899.t1	MTR_5g025690	47.692	65	32	1	84	146	131	195	9.58e-11	57.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene004899.t1	AT3G22930	82.517	143	25	0	5	147	28	170	4.51e-86	249
MS.gene004899.t1	AT4G14640	80.822	146	28	0	4	149	5	150	7.92e-86	248
MS.gene004899.t1	AT2G27030	78.000	150	33	0	1	150	1	150	3.44e-84	245
MS.gene004899.t1	AT2G27030	38.298	94	55	1	6	99	82	172	8.60e-12	60.5
MS.gene004899.t1	AT5G37780	78.378	148	32	0	1	148	1	148	1.28e-83	242
MS.gene004899.t1	AT5G37780	45.070	71	36	1	6	76	82	149	9.52e-12	59.7
MS.gene004899.t1	AT1G66410	78.378	148	32	0	1	148	1	148	1.28e-83	242
MS.gene004899.t1	AT1G66410	45.070	71	36	1	6	76	82	149	9.52e-12	59.7
MS.gene004899.t1	AT5G21274	78.378	148	32	0	1	148	1	148	2.19e-83	241
MS.gene004899.t1	AT5G21274	43.662	71	37	1	6	76	82	149	8.89e-11	57.0
MS.gene004899.t1	AT3G56800	78.378	148	32	0	1	148	1	148	2.70e-83	241
MS.gene004899.t1	AT3G56800	45.070	71	36	1	6	76	82	149	2.64e-11	58.5
MS.gene004899.t1	AT2G27030	78.378	148	32	0	1	148	1	148	2.70e-83	241
MS.gene004899.t1	AT2G27030	45.070	71	36	1	6	76	82	149	2.64e-11	58.5
MS.gene004899.t1	AT2G41110	78.378	148	32	0	1	148	1	148	2.70e-83	241
MS.gene004899.t1	AT2G41110	45.070	71	36	1	6	76	82	149	2.64e-11	58.5
MS.gene004899.t1	AT3G43810	77.703	148	33	0	1	148	1	148	5.89e-83	241
MS.gene004899.t1	AT3G43810	45.070	71	36	1	6	76	82	149	2.99e-11	58.2
MS.gene004899.t1	AT3G43810	77.703	148	33	0	1	148	1	148	1.84e-82	242
MS.gene004899.t1	AT2G41110	72.500	160	32	1	1	148	1	160	1.23e-79	233
MS.gene004899.t1	AT2G41110	45.070	71	36	1	6	76	94	161	3.31e-11	58.5
MS.gene004899.t1	AT5G37780	71.166	163	32	1	1	148	1	163	2.34e-79	232
MS.gene004899.t1	AT5G37780	45.070	71	36	1	6	76	97	164	1.45e-11	59.3
MS.gene004899.t1	AT5G37780	66.667	174	32	1	1	148	1	174	1.48e-77	228
MS.gene004899.t1	AT5G37780	45.070	71	36	1	6	76	108	175	1.80e-11	59.3
MS.gene004899.t1	AT1G66410	73.418	158	32	1	1	148	1	158	1.88e-75	222
MS.gene004899.t1	AT1G66410	45.070	71	36	1	6	76	92	159	1.21e-11	59.3
MS.gene004899.t1	AT4G14640	83.065	124	21	0	26	149	9	132	3.17e-74	218
MS.gene004899.t1	AT4G14640	45.161	62	34	0	12	73	68	129	4.25e-12	60.1
MS.gene004899.t1	AT5G37780	78.862	123	26	0	26	148	13	135	1.01e-69	206
MS.gene004899.t1	AT5G37780	45.070	71	36	1	6	76	69	136	8.10e-12	59.3
MS.gene004899.t1	AT1G66410	79.464	112	23	0	37	148	1	112	5.45e-63	189
MS.gene004899.t1	AT1G66410	45.070	71	36	1	6	76	46	113	2.63e-12	60.1
MS.gene004899.t1	AT1G66410	79.464	112	23	0	37	148	1	112	5.45e-63	189
MS.gene004899.t1	AT1G66410	45.070	71	36	1	6	76	46	113	2.63e-12	60.1
MS.gene004899.t1	AT3G43810	79.464	112	23	0	37	148	1	112	8.08e-63	188
MS.gene004899.t1	AT3G43810	45.070	71	36	1	6	76	46	113	8.47e-12	58.9
MS.gene004899.t1	AT3G43810	79.464	112	23	0	37	148	1	112	8.08e-63	188
MS.gene004899.t1	AT3G43810	45.070	71	36	1	6	76	46	113	8.47e-12	58.9
MS.gene004899.t1	AT4G14640	78.846	104	22	0	4	107	5	108	9.27e-58	176
MS.gene004899.t1	AT3G22930	78.846	104	22	0	5	108	28	131	1.91e-57	175
MS.gene004899.t1	AT3G22930	43.548	62	35	0	85	146	35	96	3.38e-11	57.8
MS.gene004899.t1	AT2G41090	50.340	147	70	1	1	147	1	144	2.50e-46	149
MS.gene004899.t1	AT3G51920	50.000	148	74	0	1	148	1	148	6.45e-44	142
MS.gene004899.t1	AT2G41100	47.853	163	68	1	1	146	55	217	1.65e-43	145
MS.gene004899.t1	AT2G41100	40.945	127	59	2	36	146	1	127	9.83e-26	99.4
MS.gene004899.t1	AT2G41100	50.526	95	44	1	3	97	147	238	6.19e-25	97.1
MS.gene004899.t1	AT2G41100	47.853	163	68	1	1	146	55	217	1.65e-43	145
MS.gene004899.t1	AT2G41100	40.945	127	59	2	36	146	1	127	9.83e-26	99.4
MS.gene004899.t1	AT2G41100	50.526	95	44	1	3	97	147	238	6.19e-25	97.1
MS.gene004899.t1	AT2G41100	47.853	163	68	1	1	146	55	217	1.65e-43	145
MS.gene004899.t1	AT2G41100	40.945	127	59	2	36	146	1	127	9.83e-26	99.4
MS.gene004899.t1	AT2G41100	50.526	95	44	1	3	97	147	238	6.19e-25	97.1
MS.gene004899.t1	AT2G41100	47.853	163	68	1	1	146	90	252	4.46e-43	145
MS.gene004899.t1	AT2G41100	43.827	162	75	2	1	146	1	162	7.70e-41	139
MS.gene004899.t1	AT2G41100	50.526	95	44	1	3	97	182	273	1.24e-24	97.1
MS.gene004899.t1	AT2G41100	47.853	163	68	1	1	146	90	252	4.46e-43	145
MS.gene004899.t1	AT2G41100	43.827	162	75	2	1	146	1	162	7.70e-41	139
MS.gene004899.t1	AT2G41100	50.526	95	44	1	3	97	182	273	1.24e-24	97.1
MS.gene004899.t1	AT3G50360	44.444	144	80	0	3	146	18	161	2.63e-39	130
MS.gene004899.t1	AT1G66400	48.551	138	69	1	12	147	15	152	3.76e-37	125
MS.gene004899.t1	AT1G66400	42.188	64	37	0	10	73	88	151	5.25e-11	57.8
MS.gene004899.t1	AT1G62820	40.278	144	84	1	5	148	6	147	5.88e-37	124
MS.gene004899.t1	AT1G12310	39.583	144	85	1	5	148	6	147	1.99e-36	122
MS.gene004899.t1	AT1G32250	39.744	156	84	2	1	146	1	156	5.11e-35	120
MS.gene004899.t1	AT5G37770	47.482	139	69	1	12	146	17	155	7.08e-35	119
MS.gene004899.t1	AT5G37770	43.077	65	37	0	10	74	92	156	8.36e-13	62.4
MS.gene004899.t1	AT5G37770	47.482	139	69	1	12	146	17	155	7.08e-35	119
MS.gene004899.t1	AT5G37770	43.077	65	37	0	10	74	92	156	8.36e-13	62.4
MS.gene004899.t1	AT1G18530	42.069	145	76	2	7	146	2	143	3.92e-34	117
MS.gene004899.t1	AT1G18530	39.474	76	43	1	4	79	77	149	3.39e-11	58.2
MS.gene004899.t1	AT4G37010	39.310	145	88	0	2	146	21	165	8.20e-33	114
MS.gene004899.t1	AT4G37010	39.310	145	88	0	2	146	17	161	9.43e-33	114
MS.gene004899.t1	AT3G03000	42.069	145	83	1	5	148	13	157	6.15e-32	112
MS.gene004899.t1	AT1G24620	43.972	141	78	1	9	149	34	173	7.10e-32	112
MS.gene004899.t1	AT1G18210	43.704	135	72	1	12	146	23	153	1.22e-30	108
MS.gene004899.t1	AT1G18210	43.704	135	72	1	12	146	23	153	1.22e-30	108
MS.gene004899.t1	AT3G25600	38.411	151	85	2	1	146	1	148	3.32e-30	107
MS.gene004899.t1	AT3G25600	38.158	76	44	1	4	79	82	154	1.13e-11	59.7
MS.gene004899.t1	AT1G73630	41.912	136	75	1	11	146	19	150	5.49e-29	104
MS.gene004899.t1	AT2G41100	46.400	125	50	1	39	146	3	127	6.95e-29	105
MS.gene004899.t1	AT2G41100	50.526	95	44	1	3	97	57	148	7.78e-26	97.4
MS.gene004899.t1	AT1G05990	40.288	139	80	2	11	146	4	142	3.07e-27	99.8
MS.gene004899.t1	AT1G05990	43.077	65	37	0	85	149	5	69	3.60e-11	58.2
MS.gene004899.t1	AT2G41100	50.515	97	45	1	1	97	1	94	4.77e-27	99.0
MS.gene004899.t1	AT2G41100	50.000	74	36	1	73	146	1	73	1.07e-16	72.4
MS.gene004899.t1	AT3G59440	40.426	141	81	2	8	146	47	186	5.65e-26	97.8
MS.gene004899.t1	AT3G59440	44.595	74	39	1	2	73	113	186	3.13e-12	61.6
MS.gene004899.t1	AT4G38230	39.726	146	85	2	1	146	174	316	7.04e-26	100
MS.gene004899.t1	AT5G23580	40.411	146	84	2	1	146	316	458	1.51e-25	101
MS.gene004899.t1	AT2G43290	39.716	141	78	3	13	146	66	206	1.53e-25	97.1
MS.gene004899.t1	AT2G43290	51.562	64	29	1	12	73	143	206	9.83e-13	63.5
MS.gene004899.t1	AT1G35670	40.411	146	84	2	1	146	320	462	1.81e-25	100
MS.gene004899.t1	AT4G38230	39.726	146	85	2	1	146	318	460	1.86e-25	100
MS.gene004899.t1	AT4G38230	39.726	146	85	2	1	146	318	460	1.86e-25	100
MS.gene004899.t1	AT5G12180	40.136	147	84	3	1	146	367	510	2.08e-25	100
MS.gene004899.t1	AT5G12180	37.209	86	51	1	67	149	357	442	9.04e-11	59.3
MS.gene004899.t1	AT4G38230	39.726	146	85	2	1	146	348	490	2.09e-25	100
MS.gene004899.t1	AT2G15680	36.806	144	89	1	5	148	43	184	2.90e-25	95.5
MS.gene004899.t1	AT3G10190	38.514	148	88	3	1	146	59	205	3.29e-25	95.9
MS.gene004899.t1	AT4G09570	41.216	148	80	3	1	146	319	461	4.27e-25	100
MS.gene004899.t1	AT5G19360	39.456	147	85	3	1	146	362	505	5.55e-25	99.8
MS.gene004899.t1	AT1G76040	37.671	146	89	2	1	146	167	310	1.22e-24	97.1
MS.gene004899.t1	AT1G76040	37.671	146	89	2	1	146	167	310	1.22e-24	97.1
MS.gene004899.t1	AT4G04720	38.255	149	88	3	1	148	373	518	3.08e-24	97.8
MS.gene004899.t1	AT4G04720	38.255	149	88	3	1	148	373	518	3.08e-24	97.8
MS.gene004899.t1	AT4G04700	40.268	149	85	3	1	148	325	470	3.30e-24	97.4
MS.gene004899.t1	AT5G04870	36.986	146	89	2	1	146	444	586	4.27e-24	97.4
MS.gene004899.t1	AT4G23650	37.162	148	87	3	1	146	372	515	4.36e-24	97.1
MS.gene004899.t1	AT4G23650	41.463	82	44	1	70	147	364	445	6.22e-12	62.4
MS.gene004899.t1	AT3G10660	36.301	146	90	2	1	146	480	622	4.80e-24	97.4
MS.gene004899.t1	AT3G10660	36.301	146	90	2	1	146	480	622	4.80e-24	97.4
MS.gene004899.t1	AT4G04695	38.255	149	88	3	1	148	325	470	5.14e-24	97.1
MS.gene004899.t1	AT3G50770	36.667	150	87	3	2	146	57	203	5.34e-24	92.8
MS.gene004899.t1	AT1G76040	37.671	146	89	2	1	146	405	548	5.47e-24	97.1
MS.gene004899.t1	AT2G17290	37.671	146	88	2	1	146	379	521	1.09e-23	96.3
MS.gene004899.t1	AT2G17290	37.671	146	88	2	1	146	379	521	1.09e-23	96.3
MS.gene004899.t1	AT4G03290	39.007	141	81	2	11	146	4	144	1.51e-23	90.1
MS.gene004899.t1	AT4G03290	48.438	64	31	1	14	75	83	146	5.23e-12	60.5
MS.gene004899.t1	AT2G41410	40.146	137	79	3	15	148	73	209	1.75e-23	91.7
MS.gene004899.t1	AT4G21940	36.913	149	90	3	1	148	395	540	5.35e-23	94.4
MS.gene004899.t1	AT4G21940	36.913	149	90	3	1	148	395	540	5.63e-23	94.0
MS.gene004899.t1	AT4G35310	36.301	146	90	2	1	146	391	533	5.81e-23	94.0
MS.gene004899.t1	AT4G35310	36.301	146	90	2	1	146	391	533	5.81e-23	94.0
MS.gene004899.t1	AT4G12860	39.552	134	79	1	15	146	8	141	6.57e-23	88.6
MS.gene004899.t1	AT4G04740	37.762	143	85	3	5	146	366	505	1.11e-22	93.2
MS.gene004899.t1	AT4G04740	37.762	143	85	3	5	146	366	505	1.11e-22	93.2
MS.gene004899.t1	AT4G04740	37.762	143	85	3	5	146	366	505	1.11e-22	93.2
MS.gene004899.t1	AT4G04740	37.762	143	85	3	5	146	366	505	1.11e-22	93.2
MS.gene004899.t1	AT4G04740	37.762	143	85	3	5	146	366	505	1.11e-22	93.2
MS.gene004899.t1	AT4G04740	37.762	143	85	3	5	146	366	505	1.11e-22	93.2
MS.gene004899.t1	AT2G38910	35.616	146	91	2	1	146	428	570	9.33e-22	90.9
MS.gene004899.t1	AT5G17470	38.060	134	81	1	15	146	5	138	9.92e-22	85.5
MS.gene004899.t1	AT3G07490	40.909	132	76	1	17	146	10	141	1.13e-21	85.5
MS.gene004899.t1	AT1G61950	35.333	150	91	3	1	148	393	538	1.56e-21	90.1
MS.gene004899.t1	AT4G20780	38.312	154	73	3	17	149	34	186	3.90e-21	85.1
MS.gene004899.t1	AT3G51850	35.135	148	95	1	1	148	348	494	4.71e-21	88.6
MS.gene004899.t1	AT3G03400	36.800	125	77	1	17	139	10	134	1.23e-20	82.4
MS.gene004899.t1	AT2G36180	40.741	135	77	1	15	146	3	137	2.28e-20	81.6
MS.gene004899.t1	AT3G03410	34.328	134	79	1	14	147	4	128	4.44e-20	80.9
MS.gene004899.t1	AT1G50700	32.432	148	98	2	1	148	367	512	1.18e-19	84.7
MS.gene004899.t1	AT3G20410	32.432	148	98	2	1	148	385	530	2.01e-19	84.0
MS.gene004899.t1	AT3G20410	32.432	148	98	2	1	148	385	530	2.01e-19	84.0
MS.gene004899.t1	AT5G12480	34.694	147	94	2	1	146	259	404	2.30e-19	83.6
MS.gene004899.t1	AT1G74740	33.333	147	95	3	1	146	353	497	2.37e-19	84.0
MS.gene004899.t1	AT5G12480	34.694	147	94	2	1	146	353	498	2.62e-19	83.6
MS.gene004899.t1	AT5G44460	39.726	146	74	4	17	149	33	177	2.92e-19	80.1
MS.gene004899.t1	AT5G42380	33.094	139	92	1	9	146	46	184	7.67e-19	79.0
MS.gene004899.t1	AT4G04710	35.374	147	91	3	1	146	326	469	1.08e-18	82.0
MS.gene004899.t1	AT4G04710	35.374	147	91	3	1	146	312	455	1.17e-18	81.6
MS.gene004899.t1	AT4G04710	35.374	147	91	3	1	146	339	482	1.26e-18	81.6
MS.gene004899.t1	AT3G57530	34.437	151	91	4	1	148	357	502	2.69e-18	80.9
MS.gene004899.t1	AT5G19450	33.333	147	96	2	1	146	351	496	1.46e-17	78.6
MS.gene004899.t1	AT5G19450	33.333	147	96	2	1	146	351	496	1.46e-17	78.6
MS.gene004899.t1	AT4G04710	35.570	149	90	4	1	146	339	484	2.00e-17	78.2
MS.gene004899.t1	AT2G31500	32.653	147	95	3	5	148	364	509	2.28e-17	78.2
MS.gene004899.t1	AT1G18890	35.099	151	87	4	1	146	357	501	2.36e-17	78.2
MS.gene004899.t1	AT2G41860	32.667	150	96	2	1	148	348	494	5.12e-17	77.0
MS.gene004899.t1	AT2G41860	32.667	150	96	2	1	148	348	494	5.48e-17	77.0
MS.gene004899.t1	AT4G04740	36.434	129	78	3	5	132	366	491	8.65e-17	76.6
MS.gene004899.t1	AT3G51850	38.679	106	64	1	1	106	348	452	2.49e-16	75.1
MS.gene004899.t1	AT2G17890	29.221	154	97	5	1	148	404	551	2.91e-16	75.1
MS.gene004899.t1	AT1G76640	31.944	144	92	2	7	146	17	158	1.43e-15	69.7
MS.gene004899.t1	AT5G66210	28.571	154	98	5	1	148	358	505	2.13e-15	72.4
MS.gene004899.t1	AT5G66210	28.571	154	98	5	1	148	358	505	2.13e-15	72.4
MS.gene004899.t1	AT1G50700	28.161	174	97	3	1	148	367	538	3.42e-15	72.0
MS.gene004899.t1	AT1G21550	32.237	152	83	4	12	149	10	155	1.43e-14	67.0
MS.gene004899.t1	AT5G49480	30.065	153	99	3	1	146	7	158	5.70e-14	65.5
MS.gene004899.t1	AT1G76040	37.624	101	62	1	1	101	405	504	2.17e-13	66.6
MS.gene004899.t1	AT4G21940	38.384	99	60	1	1	99	395	492	2.18e-13	66.6
MS.gene004899.t1	AT1G76650	33.083	133	82	2	17	146	48	176	3.10e-13	63.9
MS.gene004899.t1	AT1G76650	33.083	133	82	2	17	146	48	176	3.10e-13	63.9
MS.gene004899.t1	AT5G66210	27.481	131	89	3	1	125	358	488	9.35e-12	62.0
MS.gene004899.t1	AT3G01830	30.612	147	78	6	12	146	11	145	2.31e-11	58.5
MS.gene004899.t1	AT4G36070	26.623	154	101	5	1	148	367	514	2.62e-11	60.8
MS.gene004899.t1	AT4G36070	26.623	154	101	5	1	148	367	514	2.94e-11	60.5
MS.gene004899.t1	AT5G66210	29.565	115	75	3	1	109	358	472	7.79e-11	59.3

Find 27 sgRNAs with CRISPR-Local

Find 68 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGATGAGTTCTTGAACTTGA+TGG	0.326901	1.4:+62942388	MS.gene004899:CDS
AGCCACTGTTATCAGGTCAT+TGG	0.372626	1.4:+62942289	MS.gene004899:CDS
TTTAGTTTGTTTGACAAAGA+TGG	0.393112	1.4:+62942129	MS.gene004899:CDS
GATGATTAAAGAAGCAGATA+TGG	0.394958	1.4:+62943420	MS.gene004899:CDS
GGAGCTTAGAGAGGCTTTCA+AGG	0.423469	1.4:+62942612	MS.gene004899:CDS
GTCTTTGACAAAGATCAAAA+TGG	0.424272	1.4:+62942634	MS.gene004899:CDS
CAAGAACTCATCAAATTCAA+TGG	0.434228	1.4:-62942378	None:intergenic
AAGAATTAGCCACTGTTATC+AGG	0.445790	1.4:+62942282	MS.gene004899:CDS
CAACAATTTGTTCTTCACTA+AGG	0.446590	1.4:-62942092	None:intergenic
TCTTGTAGCTCTTCTTCAGT+GGG	0.469600	1.4:-62942320	None:intergenic
AGTTCTTGAACTTGATGGCT+AGG	0.482060	1.4:+62942393	MS.gene004899:CDS
ATCTTGTAGCTCTTCTTCAG+TGG	0.512984	1.4:-62942321	None:intergenic
ATCTTTGTCAAACAAACTAA+AGG	0.531026	1.4:-62942127	None:intergenic
AGACACGTGATGATCAATCT+AGG	0.540494	1.4:+62943367	MS.gene004899:CDS
ACAAATTGTTGATTTCAAAG+AGG	0.544777	1.4:+62942104	MS.gene004899:CDS
CATTTAGGACACTGATGCAG+AGG	0.570696	1.4:+62942588	MS.gene004899:intron
GAAGTTGATGCAGATGGCAA+TGG	0.578787	1.4:+62942353	MS.gene004899:CDS
TTGTTTGACAAAGATGGAGA+TGG	0.596377	1.4:+62942135	MS.gene004899:CDS
TTCACTAAGGACATGTGCCA+TGG	0.599624	1.4:-62942079	None:intergenic
ATTAAAGAAGCAGATATGGA+TGG	0.602493	1.4:+62943424	MS.gene004899:CDS
GAAGCAGATATGGATGGTGA+TGG	0.608277	1.4:+62943430	MS.gene004899:CDS
TTAGGACACTGATGCAGAGG+AGG	0.624491	1.4:+62942591	MS.gene004899:intron
TGCAGAGGAGGAGCTTAGAG+AGG	0.630033	1.4:+62942603	MS.gene004899:CDS
ATAAGTGAAGTTGATGCAGA+TGG	0.649786	1.4:+62942347	MS.gene004899:CDS
TGGCTATATATCAGCCAGTG+AGG	0.688712	1.4:+62942654	MS.gene004899:CDS
GCAAACAGGTTGCATTACTG+TGG	0.701892	1.4:+62942259	MS.gene004899:intron
ATCCAATGACCTGATAACAG+TGG	0.720716	1.4:-62942291	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAAATAAATAATGAATAGAA+TGG	-	chr1.4:62942454-62942473	None:intergenic	10.0%
!!!	AAATTTTAGAAAATCTAATA+TGG	-	chr1.4:62942742-62942761	None:intergenic	10.0%
!!!	AATTTTAGAAAATCTAATAT+GGG	-	chr1.4:62942741-62942760	None:intergenic	10.0%
!!!	TCTAAAATTTTATTTTTTGA+TGG	+	chr1.4:62942752-62942771	MS.gene004899:intron	10.0%
!!	AAAAAGAAAAACTATGTAAA+TGG	-	chr1.4:62942885-62942904	None:intergenic	15.0%
!!	TATTAAGGTGAAAAAAAAAA+TGG	-	chr1.4:62942861-62942880	None:intergenic	15.0%
!!!	AAAATTTTATTTTTTGATGG+TGG	+	chr1.4:62942755-62942774	MS.gene004899:intron	15.0%
!!!	CTGTTATTTTATTTTCATTT+AGG	+	chr1.4:62942573-62942592	MS.gene004899:intron	15.0%
!!	AACTATGTAAATGGTTATTA+AGG	-	chr1.4:62942876-62942895	None:intergenic	20.0%
!!	ATAGAAATTAAGATAGCAAT+GGG	+	chr1.4:62943204-62943223	MS.gene004899:intron	20.0%
!!	TAAATAATGAATAGAATGGA+AGG	-	chr1.4:62942450-62942469	None:intergenic	20.0%
!	ATATCTTGTATTGTACATGA+AGG	+	chr1.4:62943275-62943294	MS.gene004899:intron	25.0%
!	ATCTTTGTCAAACAAACTAA+AGG	-	chr1.4:62942130-62942149	None:intergenic	25.0%
!	CTTTCAATATCAAAGTTCTA+AGG	+	chr1.4:62942488-62942507	MS.gene004899:intron	25.0%
!	GATAGAAATTAAGATAGCAA+TGG	+	chr1.4:62943203-62943222	MS.gene004899:intron	25.0%
!	TACAATACAAGATATATACG+TGG	-	chr1.4:62943270-62943289	None:intergenic	25.0%
!!	AACAATTTTATATACCTCAC+TGG	-	chr1.4:62942671-62942690	None:intergenic	25.0%
!!	ATATTTTCATTTCCTCTGTT+TGG	+	chr1.4:62943021-62943040	MS.gene004899:intron	25.0%
!!	TATTTTCATTTCCTCTGTTT+GGG	+	chr1.4:62943022-62943041	MS.gene004899:intron	25.0%
!!!	ACAAATTGTTGATTTCAAAG+AGG	+	chr1.4:62942104-62942123	MS.gene004899:CDS	25.0%
!!!	TTTAGTTTGTTTGACAAAGA+TGG	+	chr1.4:62942129-62942148	MS.gene004899:CDS	25.0%
	ACAAGATATATACGTGGAAA+AGG	-	chr1.4:62943264-62943283	None:intergenic	30.0%
	ATTAAAGAAGCAGATATGGA+TGG	+	chr1.4:62943424-62943443	MS.gene004899:CDS	30.0%
	CAAGAACTCATCAAATTCAA+TGG	-	chr1.4:62942381-62942400	None:intergenic	30.0%
	CAATAACCAAAGACTAAGTT+TGG	+	chr1.4:62942548-62942567	MS.gene004899:intron	30.0%
	GACAATGCATAATATATGCA+AGG	-	chr1.4:62942800-62942819	None:intergenic	30.0%
	GATGATTAAAGAAGCAGATA+TGG	+	chr1.4:62943420-62943439	MS.gene004899:CDS	30.0%
	GTCTTTGACAAAGATCAAAA+TGG	+	chr1.4:62942634-62942653	MS.gene004899:CDS	30.0%
	GTGATGAGAATTCTGTTAAA+AGG	-	chr1.4:62942175-62942194	None:intergenic	30.0%
	TCATACATCATCATATGCAT+AGG	+	chr1.4:62942197-62942216	MS.gene004899:intron	30.0%
	TGAAAAACTAAGTGATGAAG+AGG	+	chr1.4:62943390-62943409	MS.gene004899:CDS	30.0%
	TTGGATAGTGAAATATACGA+TGG	+	chr1.4:62943312-62943331	MS.gene004899:intron	30.0%
!	CAACAATTTGTTCTTCACTA+AGG	-	chr1.4:62942095-62942114	None:intergenic	30.0%
!!	ATCAAAGTTCTAAGGTCTAT+AGG	+	chr1.4:62942496-62942515	MS.gene004899:intron	30.0%
	AAGAATTAGCCACTGTTATC+AGG	+	chr1.4:62942282-62942301	MS.gene004899:CDS	35.0%
	AATGATTACTTCCCAAACAG+AGG	-	chr1.4:62943036-62943055	None:intergenic	35.0%
	ATCTTGTTGAATGTGCAAAC+AGG	+	chr1.4:62942245-62942264	MS.gene004899:intron	35.0%
	CATAATATATGCAAGGTCTG+GGG	-	chr1.4:62942793-62942812	None:intergenic	35.0%
	GCATAATATATGCAAGGTCT+GGG	-	chr1.4:62942794-62942813	None:intergenic	35.0%
	TGATGAGTTCTTGAACTTGA+TGG	+	chr1.4:62942388-62942407	MS.gene004899:CDS	35.0%
	TGCATAATATATGCAAGGTC+TGG	-	chr1.4:62942795-62942814	None:intergenic	35.0%
	TTATATCCACATGCACATCT+AGG	+	chr1.4:62943128-62943147	MS.gene004899:intron	35.0%
	TTGTTTGACAAAGATGGAGA+TGG	+	chr1.4:62942135-62942154	MS.gene004899:CDS	35.0%
!	ACAGAACCAAACTTAGTCTT+TGG	-	chr1.4:62942557-62942576	None:intergenic	35.0%
!	GAAGGCATAAACATGCATAT+TGG	+	chr1.4:62943293-62943312	MS.gene004899:intron	35.0%
!	TGAGTTTAGTTCAGTTGGTA+AGG	-	chr1.4:62942822-62942841	None:intergenic	35.0%
!!	ATAAGTGAAGTTGATGCAGA+TGG	+	chr1.4:62942347-62942366	MS.gene004899:CDS	35.0%
!!!	TTATTTTTTGATGGTGGTCG+AGG	+	chr1.4:62942761-62942780	MS.gene004899:intron	35.0%
	AGACACGTGATGATCAATCT+AGG	+	chr1.4:62943367-62943386	MS.gene004899:CDS	40.0%
	ATCCAATGACCTGATAACAG+TGG	-	chr1.4:62942294-62942313	None:intergenic	40.0%
	ATCTTGTAGCTCTTCTTCAG+TGG	-	chr1.4:62942324-62942343	None:intergenic	40.0%
	CAGCTAATATTCACTGCATG+TGG	-	chr1.4:62943172-62943191	None:intergenic	40.0%
	CCAACTGAACTAAACTCACA+AGG	+	chr1.4:62942824-62942843	MS.gene004899:intron	40.0%
	TCTTGTAGCTCTTCTTCAGT+GGG	-	chr1.4:62942323-62942342	None:intergenic	40.0%
!	AGTTCTTGAACTTGATGGCT+AGG	+	chr1.4:62942393-62942412	MS.gene004899:CDS	40.0%
!	CCTTGTGAGTTTAGTTCAGT+TGG	-	chr1.4:62942827-62942846	None:intergenic	40.0%
	AGCCACTGTTATCAGGTCAT+TGG	+	chr1.4:62942289-62942308	MS.gene004899:CDS	45.0%
	GAAGCAGATATGGATGGTGA+TGG	+	chr1.4:62943430-62943449	MS.gene004899:CDS	45.0%
	GCAAACAGGTTGCATTACTG+TGG	+	chr1.4:62942259-62942278	MS.gene004899:intron	45.0%
	TACTGTCCTAGATGTGCATG+TGG	-	chr1.4:62943137-62943156	None:intergenic	45.0%
	TCACTGCATGTGGAAACGTA+CGG	-	chr1.4:62943162-62943181	None:intergenic	45.0%
	TGGCTATATATCAGCCAGTG+AGG	+	chr1.4:62942654-62942673	MS.gene004899:CDS	45.0%
!	CATTTAGGACACTGATGCAG+AGG	+	chr1.4:62942588-62942607	MS.gene004899:intron	45.0%
!!	GAAGTTGATGCAGATGGCAA+TGG	+	chr1.4:62942353-62942372	MS.gene004899:CDS	45.0%
!!	TTAAAATTTGTATTTAAAAA+TGG	-	chr1.4:62942924-62942943	None:intergenic	5.0%
	GGAGCTTAGAGAGGCTTTCA+AGG	+	chr1.4:62942612-62942631	MS.gene004899:CDS	50.0%
	TTAGGACACTGATGCAGAGG+AGG	+	chr1.4:62942591-62942610	MS.gene004899:intron	50.0%
	TGCAGAGGAGGAGCTTAGAG+AGG	+	chr1.4:62942603-62942622	MS.gene004899:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.4	gene	62942081	62943501	62942081	ID=MS.gene004899
chr1.4	mRNA	62942081	62943501	62942081	ID=MS.gene004899.t1;Parent=MS.gene004899
chr1.4	exon	62942081	62942156	62942081	ID=MS.gene004899.t1.exon1;Parent=MS.gene004899.t1
chr1.4	CDS	62942081	62942156	62942081	ID=cds.MS.gene004899.t1;Parent=MS.gene004899.t1
chr1.4	exon	62942267	62942424	62942267	ID=MS.gene004899.t1.exon2;Parent=MS.gene004899.t1
chr1.4	CDS	62942267	62942424	62942267	ID=cds.MS.gene004899.t1;Parent=MS.gene004899.t1
chr1.4	exon	62942595	62942675	62942595	ID=MS.gene004899.t1.exon3;Parent=MS.gene004899.t1
chr1.4	CDS	62942595	62942675	62942595	ID=cds.MS.gene004899.t1;Parent=MS.gene004899.t1
chr1.4	exon	62943364	62943501	62943364	ID=MS.gene004899.t1.exon4;Parent=MS.gene004899.t1
chr1.4	CDS	62943364	62943501	62943364	ID=cds.MS.gene004899.t1;Parent=MS.gene004899.t1

Gene Sequence

>MS.gene004899

ATGGCACATGTCCTTAGTGAAGAACAAATTGTTGATTTCAAAGAGGCCTTTAGTTTGTTTGACAAAGATGGAGATGGTGAGTTTAATTTCTCCTTTTAACAGAATTCTCATCACTATCATACATCATCATATGCATAGGATATAAATGTTTAAAAATTGTGTTAATCTTGTTGAATGTGCAAACAGGTTGCATTACTGTGGAAGAATTAGCCACTGTTATCAGGTCATTGGATCAGAATCCCACTGAAGAAGAGCTACAAGATATGATAAGTGAAGTTGATGCAGATGGCAATGGAACCATTGAATTTGATGAGTTCTTGAACTTGATGGCTAGGAAAATGAAAGTAATACTAACATATATATTTTCCTTCCATTCTATTCATTATTTATTTATTTATTTATTTATACTTTCAATATCAAAGTTCTAAGGTCTATAGGCTTCATATACATTTTATTATTATTCAATTCAATAACCAAAGACTAAGTTTGGTTCTGTTATTTTATTTTCATTTAGGACACTGATGCAGAGGAGGAGCTTAGAGAGGCTTTCAAGGTCTTTGACAAAGATCAAAATGGCTATATATCAGCCAGTGAGGTATATAAAATTGTTTCTATTTTGTAAAGTAAATTTCTTTTTTATTTTTTTATTCATGAACACCCATATTAGATTTTCTAAAATTTTATTTTTTGATGGTGGTCGAGGTTTGAACCCCAGACCTTGCATATATTATGCATTGTCCTTACCAACTGAACTAAACTCACAAGGACGATTGCTTGCCATTTTTTTTTTCACCTTAATAACCATTTACATAGTTTTTCTTTTTCTTTTTCTTTCTATTTCCATTTTTAAATACAAATTTTAAATATAACAACTTAAAAAAAATGAAATTATGAAAAGTTCAATAGTTCATTACAATATTTGTACATAATAATTATTGACATATTTTCATTTCCTCTGTTTGGGAAGTAATCATTAATTTTGACTACTACAAATGCAATTTTTTTGCAATTTTGTTTTCATAAAAATGTTAATTTGTTGCATTTTTTTTATATCCACATGCACATCTAGGACAGTACACCGTACGTTTCCACATGCAGTGAATATTAGCTGTATAATGATAAGATAGAAATTAAGATAGCAATGGGATAAGATAGAATCTTTTACACTATTTTTTTTTTTCCTTTTCCACGTATATATCTTGTATTGTACATGAAGGCATAAACATGCATATTGGATAGTGAAATATACGATGGTAAAAAATTAATGTGTGTGTATTGTGCAGTTGAGACACGTGATGATCAATCTAGGTGAAAAACTAAGTGATGAAGAGGTAGAGCAGATGATTAAAGAAGCAGATATGGATGGTGATGGTCAAGTTGACTTTGATGAATTCGTCAAGATGATGATGACCATTCGATGA

Protein sequence

>MS.gene004899.t1

MAHVLSEEQIVDFKEAFSLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLNLMARKMKDTDAEEELREAFKVFDKDQNGYISASELRHVMINLGEKLSDEEVEQMIKEADMDGDGQVDFDEFVKMMMTIR