AlfalfaGEDB | MS.gene97948

M. sativa cultivar XinJiangDaYe / MS.gene97948

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene97948.t1	KEH20220.1	100	160	0	0	1	160	1	160	1.10E-82	315.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene97948.t1	Q9LI84	69.0	158	49	0	1	158	1	158	6.1e-53	208.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene97948.t1	A0A072U325	100.0	160	0	0	1	160	1	160	8.1e-83	315.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene056461	MS.gene97948	0.989564	1.15E-178	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene97948	MS.gene057167	PPI
MS.gene97948	MS.gene93763	PPI
MS.gene97948	MS.gene64313	PPI
MS.gene97948	MS.gene49270	PPI
MS.gene97948	MS.gene64307	PPI
MS.gene97948	MS.gene024717	PPI
MS.gene68345	MS.gene97948	PPI
MS.gene97948	MS.gene21932	PPI
MS.gene97948	MS.gene026618	PPI
MS.gene97948	MS.gene29794	PPI
MS.gene62258	MS.gene97948	PPI
MS.gene97948	MS.gene71511	PPI
MS.gene038456	MS.gene97948	PPI
MS.gene97948	MS.gene033361	PPI
MS.gene97948	MS.gene89216	PPI
MS.gene97948	MS.gene35562	PPI
MS.gene97948	MS.gene64308	PPI
MS.gene97948	MS.gene009021	PPI
MS.gene97948	MS.gene47195	PPI
MS.gene97948	MS.gene21155	PPI
MS.gene97948	MS.gene060446	PPI
MS.gene97948	MS.gene07422	PPI
MS.gene58860	MS.gene97948	PPI
MS.gene97948	MS.gene062239	PPI
MS.gene97948	MS.gene013748	PPI
MS.gene97948	MS.gene64316	PPI
MS.gene97948	MS.gene98294	PPI
MS.gene97948	MS.gene22553	PPI
MS.gene97948	MS.gene061261	PPI
MS.gene04917	MS.gene97948	PPI
MS.gene97948	MS.gene03228	PPI
MS.gene97948	MS.gene036930	PPI
MS.gene97948	MS.gene46237	PPI
MS.gene97948	MS.gene64317	PPI
MS.gene97948	MS.gene040331	PPI
MS.gene97948	MS.gene53648	PPI
MS.gene97948	MS.gene015470	PPI
MS.gene97948	MS.gene55545	PPI
MS.gene97948	MS.gene63000	PPI
MS.gene97948	MS.gene64310	PPI
MS.gene97948	MS.gene29459	PPI
MS.gene97948	MS.gene71207	PPI
MS.gene97948	MS.gene67281	PPI
MS.gene97948	MS.gene92775	PPI
MS.gene97948	MS.gene74452	PPI
MS.gene97948	MS.gene09934	PPI
MS.gene97948	MS.gene53662	PPI
MS.gene97948	MS.gene63281	PPI
MS.gene97948	MS.gene68345	PPI
MS.gene97948	MS.gene008225	PPI
MS.gene97948	MS.gene000724	PPI
MS.gene003880	MS.gene97948	PPI
MS.gene97948	MS.gene21696	PPI
MS.gene97948	MS.gene29793	PPI
MS.gene97948	MS.gene022456	PPI
MS.gene97948	MS.gene05284	PPI
MS.gene97948	MS.gene001246	PPI
MS.gene97948	MS.gene074045	PPI
MS.gene97948	MS.gene000738	PPI
MS.gene97948	MS.gene85596	PPI
MS.gene97948	MS.gene96922	PPI
MS.gene97948	MS.gene04917	PPI
MS.gene46886	MS.gene97948	PPI
MS.gene97948	MS.gene64324	PPI
MS.gene97948	MS.gene056383	PPI
MS.gene97948	MS.gene64314	PPI
MS.gene97948	MS.gene025777	PPI
MS.gene97948	MS.gene94551	PPI
MS.gene97948	MS.gene022455	PPI
MS.gene97948	MS.gene046988	PPI
MS.gene97948	MS.gene074100	PPI
MS.gene97948	MS.gene057293	PPI
MS.gene97948	MS.gene53650	PPI
MS.gene97948	MS.gene04915	PPI
MS.gene64324	MS.gene97948	PPI
MS.gene97948	MS.gene54637	PPI
MS.gene97948	MS.gene58906	PPI
MS.gene97948	MS.gene79028	PPI
MS.gene97948	MS.gene64311	PPI
MS.gene97948	MS.gene49271	PPI
MS.gene97948	MS.gene053319	PPI
MS.gene97948	MS.gene026940	PPI
MS.gene97948	MS.gene65954	PPI
MS.gene97948	MS.gene98295	PPI
MS.gene97948	MS.gene64327	PPI
MS.gene97948	MS.gene62258	PPI
MS.gene97948	MS.gene28338	PPI
MS.gene97948	MS.gene041795	PPI
MS.gene97948	MS.gene55496	PPI
MS.gene97948	MS.gene025797	PPI
MS.gene97948	MS.gene21931	PPI
MS.gene97948	MS.gene87673	PPI
MS.gene97948	MS.gene27516	PPI
MS.gene97948	MS.gene040127	PPI
MS.gene97948	MS.gene53659	PPI
MS.gene97948	MS.gene09960	PPI
MS.gene004899	MS.gene97948	PPI
MS.gene97948	MS.gene011400	PPI
MS.gene97948	MS.gene061768	PPI
MS.gene97948	MS.gene62540	PPI
MS.gene97948	MS.gene47134	PPI
MS.gene97948	MS.gene017446	PPI
MS.gene97948	MS.gene96914	PPI
MS.gene97948	MS.gene02545	PPI
MS.gene97948	MS.gene96913	PPI
MS.gene97948	MS.gene61009	PPI
MS.gene97948	MS.gene35563	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene97948.t1	MTR_8g069915	100.000	160	0	0	1	160	1	160	6.89e-116	325
MS.gene97948.t1	MTR_4g112460	70.861	151	44	0	8	158	7	157	1.66e-78	230
MS.gene97948.t1	MTR_8g066630	52.349	149	70	1	7	154	12	160	3.22e-50	159
MS.gene97948.t1	MTR_7g087610	43.357	143	79	1	6	148	6	146	5.14e-35	119
MS.gene97948.t1	MTR_6g025320	42.657	143	80	1	6	148	6	146	2.93e-34	117
MS.gene97948.t1	MTR_5g088320	41.958	143	81	1	6	148	6	146	1.20e-33	116
MS.gene97948.t1	MTR_1g041285	41.216	148	85	1	1	148	1	146	5.46e-32	112
MS.gene97948.t1	MTR_1g076650	39.189	148	88	1	1	148	1	146	1.27e-31	111
MS.gene97948.t1	MTR_1g076650	36.842	76	45	1	82	154	4	79	1.75e-11	58.9
MS.gene97948.t1	MTR_0168s0120	41.964	112	63	1	37	148	1	110	1.25e-23	89.7
MS.gene97948.t1	MTR_6g025320	41.964	112	63	1	37	148	1	110	1.25e-23	89.7
MS.gene97948.t1	MTR_1g071150	35.135	148	93	1	1	148	1	145	2.94e-23	89.7
MS.gene97948.t1	MTR_7g115040	34.459	148	95	1	1	148	1	146	1.13e-21	85.5
MS.gene97948.t1	MTR_8g105230	34.586	133	85	1	12	144	36	166	1.35e-21	86.7
MS.gene97948.t1	MTR_8g105230	43.750	64	36	0	87	150	36	99	2.72e-11	59.3
MS.gene97948.t1	MTR_1g046950	31.250	144	96	1	7	150	2	142	4.76e-21	84.0
MS.gene97948.t1	MTR_3g067610	30.556	144	88	2	11	151	4	138	1.55e-20	82.4
MS.gene97948.t1	MTR_3g067610	38.462	65	40	0	83	147	1	65	7.20e-11	57.4
MS.gene97948.t1	MTR_1g032070	32.374	139	92	1	13	151	47	183	3.77e-20	82.8
MS.gene97948.t1	MTR_1g032070	44.615	65	36	0	86	150	45	109	1.82e-11	60.1
MS.gene97948.t1	MTR_1g026190	33.775	151	92	3	6	154	381	525	8.60e-20	85.5
MS.gene97948.t1	MTR_5g079340	29.371	143	95	2	7	149	2	138	1.03e-19	80.5
MS.gene97948.t1	MTR_8g107110	32.168	143	94	2	12	154	24	163	1.23e-19	80.9
MS.gene97948.t1	MTR_4g067270	31.788	151	93	3	12	157	5	150	1.81e-19	80.1
MS.gene97948.t1	MTR_7g106710	32.000	150	97	2	6	155	434	578	1.91e-19	84.3
MS.gene97948.t1	MTR_5g009830	32.692	156	97	3	6	159	365	514	3.33e-18	80.9
MS.gene97948.t1	MTR_7g089760	32.877	146	88	3	12	152	5	145	3.67e-18	76.6
MS.gene97948.t1	MTR_5g027000	31.724	145	97	1	4	148	14	156	5.34e-18	76.3
MS.gene97948.t1	MTR_5g092810	33.793	145	88	3	6	148	391	529	7.48e-18	79.7
MS.gene97948.t1	MTR_3g055570	35.252	139	73	2	7	145	47	168	1.13e-17	75.9
MS.gene97948.t1	MTR_1g096490	31.579	152	99	3	6	157	329	475	1.29e-17	79.3
MS.gene97948.t1	MTR_7g090450	32.857	140	91	3	12	148	73	212	1.30e-17	76.6
MS.gene97948.t1	MTR_4g086260	27.941	136	94	1	16	151	61	192	2.02e-17	75.9
MS.gene97948.t1	MTR_1g041150	29.221	154	104	2	6	159	417	565	2.10e-17	78.6
MS.gene97948.t1	MTR_1g055255	30.872	149	98	2	6	154	423	566	2.23e-17	78.6
MS.gene97948.t1	MTR_4g132070	32.414	145	90	3	6	148	390	528	3.06e-17	78.2
MS.gene97948.t1	MTR_1g047100	28.671	143	98	2	7	149	2	140	8.64e-17	72.8
MS.gene97948.t1	MTR_8g099095	33.553	152	93	4	6	155	365	510	1.06e-16	76.6
MS.gene97948.t1	MTR_6g023460	27.660	141	99	1	8	148	4	141	2.65e-16	71.6
MS.gene97948.t1	MTR_5g017550	30.201	149	96	4	1	148	40	181	2.77e-16	72.8
MS.gene97948.t1	MTR_3g089070	31.579	133	88	2	16	148	10	139	6.33e-16	70.5
MS.gene97948.t1	MTR_3g089090	31.579	133	88	2	16	148	9	138	7.10e-16	70.5
MS.gene97948.t1	MTR_8g095440	31.724	145	94	3	6	150	329	468	7.82e-16	73.9
MS.gene97948.t1	MTR_5g011850	29.452	146	98	3	6	150	6	147	1.07e-15	70.1
MS.gene97948.t1	MTR_7g074020	26.573	143	103	1	6	148	24	164	1.82e-15	70.1
MS.gene97948.t1	MTR_5g017510	30.000	150	96	4	1	148	40	182	1.87e-15	70.5
MS.gene97948.t1	MTR_5g017560	30.000	150	96	4	1	148	40	182	1.87e-15	70.5
MS.gene97948.t1	MTR_3g055585	33.333	141	77	1	7	147	47	170	1.95e-15	70.1
MS.gene97948.t1	MTR_7g075040	30.464	151	95	5	12	154	47	195	2.22e-15	70.5
MS.gene97948.t1	MTR_4g107490	29.054	148	101	2	8	155	374	517	2.53e-15	72.8
MS.gene97948.t1	MTR_3g055520	32.624	141	78	1	7	147	47	170	2.75e-15	69.7
MS.gene97948.t1	MTR_7g068710	28.667	150	103	3	6	155	355	500	3.68e-15	72.0
MS.gene97948.t1	MTR_5g089320	31.081	148	92	4	6	150	367	507	3.84e-15	72.0
MS.gene97948.t1	MTR_5g099240	31.724	145	94	3	6	150	323	462	6.97e-15	71.2
MS.gene97948.t1	MTR_5g099240	31.724	145	94	3	6	150	395	534	7.45e-15	71.2
MS.gene97948.t1	MTR_3g051770	30.872	149	94	3	6	148	382	527	8.05e-15	71.2
MS.gene97948.t1	MTR_0028s0170	31.081	148	92	4	6	150	377	517	8.76e-15	70.9
MS.gene97948.t1	MTR_6g079570	27.338	139	97	2	12	149	26	161	9.08e-15	68.2
MS.gene97948.t1	MTR_1g054865	29.371	143	96	3	6	148	460	597	1.64e-14	70.5
MS.gene97948.t1	MTR_6g007613	25.170	147	108	1	6	152	23	167	2.01e-14	67.4
MS.gene97948.t1	MTR_7g074020	27.132	129	92	1	6	134	24	150	4.40e-14	66.2
MS.gene97948.t1	MTR_3g098090	31.250	144	94	3	7	150	332	470	4.87e-14	68.9
MS.gene97948.t1	MTR_3g098070	30.345	145	96	3	6	150	328	467	1.03e-13	67.8
MS.gene97948.t1	MTR_7g106710	31.008	129	84	2	6	134	434	557	2.49e-13	67.0
MS.gene97948.t1	MTR_8g036075	28.571	147	93	4	12	149	49	192	9.16e-13	63.5
MS.gene97948.t1	MTR_6g007613	26.357	129	93	1	6	134	23	149	1.92e-12	62.0
MS.gene97948.t1	MTR_4g132040	27.660	141	98	2	8	148	396	532	2.35e-12	63.9
MS.gene97948.t1	MTR_2g098890	30.070	143	92	3	12	149	64	203	2.84e-12	62.4
MS.gene97948.t1	MTR_1g030440	32.374	139	92	2	12	148	22	160	3.29e-12	61.2
MS.gene97948.t1	MTR_4g103655	27.907	129	90	1	20	148	14	139	7.53e-12	59.7
MS.gene97948.t1	MTR_3g055510	35.443	79	51	0	76	154	61	139	1.09e-11	59.3
MS.gene97948.t1	MTR_4g103650	26.277	137	98	1	12	148	2	135	1.64e-11	58.9
MS.gene97948.t1	MTR_4g103630	27.007	137	97	2	12	148	6	139	2.09e-11	58.5
MS.gene97948.t1	MTR_4g115170	29.268	164	100	4	11	158	63	226	2.36e-11	60.1
MS.gene97948.t1	MTR_8g078270	25.694	144	105	1	6	149	47	188	5.42e-11	58.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene97948.t1	AT3G25600	77.848	158	35	0	1	158	1	158	2.17e-87	253
MS.gene97948.t1	AT1G18530	71.429	154	44	0	7	160	2	155	1.25e-82	240
MS.gene97948.t1	AT1G32250	50.000	152	72	1	7	154	11	162	2.01e-48	154
MS.gene97948.t1	AT3G03000	52.703	148	69	1	7	154	15	161	7.96e-43	140
MS.gene97948.t1	AT3G56800	42.657	143	80	1	6	148	6	146	2.07e-34	118
MS.gene97948.t1	AT2G27030	42.657	143	80	1	6	148	6	146	2.07e-34	118
MS.gene97948.t1	AT2G41110	42.657	143	80	1	6	148	6	146	2.07e-34	118
MS.gene97948.t1	AT5G37780	42.657	143	80	1	6	148	6	146	2.97e-34	117
MS.gene97948.t1	AT5G37780	41.176	68	40	0	87	154	12	79	5.29e-11	57.8
MS.gene97948.t1	AT1G66410	42.657	143	80	1	6	148	6	146	2.97e-34	117
MS.gene97948.t1	AT1G66410	41.176	68	40	0	87	154	12	79	5.29e-11	57.8
MS.gene97948.t1	AT3G43810	42.657	143	80	1	6	148	6	146	3.07e-34	117
MS.gene97948.t1	AT2G27030	42.657	143	80	1	6	148	6	146	4.47e-34	118
MS.gene97948.t1	AT5G21274	41.958	143	81	1	6	148	6	146	1.07e-33	116
MS.gene97948.t1	AT3G43810	42.657	143	80	1	6	148	6	146	3.62e-33	117
MS.gene97948.t1	AT4G14640	40.559	143	83	1	6	148	7	147	1.01e-32	114
MS.gene97948.t1	AT2G41110	39.355	155	80	2	6	148	6	158	2.09e-30	108
MS.gene97948.t1	AT5G37780	38.608	158	80	2	6	148	6	161	6.02e-30	107
MS.gene97948.t1	AT3G22930	39.860	143	84	1	6	148	29	169	1.39e-29	106
MS.gene97948.t1	AT3G22930	42.857	70	37	1	83	149	28	97	3.91e-11	58.5
MS.gene97948.t1	AT5G37780	36.095	169	80	2	6	148	6	172	3.89e-28	103
MS.gene97948.t1	AT1G66410	39.869	153	80	2	6	148	6	156	6.33e-28	102
MS.gene97948.t1	AT3G51920	36.364	143	89	1	6	148	6	146	8.97e-28	101
MS.gene97948.t1	AT5G37780	42.276	123	69	1	26	148	13	133	5.91e-27	99.0
MS.gene97948.t1	AT4G14640	39.837	123	72	1	26	148	9	129	3.01e-26	97.1
MS.gene97948.t1	AT2G41100	35.366	164	91	2	6	154	60	223	1.43e-25	99.4
MS.gene97948.t1	AT2G41100	33.846	130	72	2	36	151	1	130	9.51e-15	70.1
MS.gene97948.t1	AT2G41100	35.366	164	91	2	6	154	60	223	1.43e-25	99.4
MS.gene97948.t1	AT2G41100	33.846	130	72	2	36	151	1	130	9.51e-15	70.1
MS.gene97948.t1	AT2G41100	35.366	164	91	2	6	154	60	223	1.43e-25	99.4
MS.gene97948.t1	AT2G41100	33.846	130	72	2	36	151	1	130	9.51e-15	70.1
MS.gene97948.t1	AT2G41100	35.849	159	87	2	6	149	95	253	2.54e-25	99.4
MS.gene97948.t1	AT2G41100	36.250	160	88	2	6	151	6	165	1.72e-24	97.1
MS.gene97948.t1	AT2G41100	35.849	159	87	2	6	149	95	253	2.54e-25	99.4
MS.gene97948.t1	AT2G41100	36.250	160	88	2	6	151	6	165	1.72e-24	97.1
MS.gene97948.t1	AT1G66410	42.857	112	62	1	37	148	1	110	3.07e-24	91.3
MS.gene97948.t1	AT1G66410	42.857	112	62	1	37	148	1	110	3.07e-24	91.3
MS.gene97948.t1	AT3G43810	41.964	112	63	1	37	148	1	110	1.31e-23	89.7
MS.gene97948.t1	AT3G43810	41.964	112	63	1	37	148	1	110	1.31e-23	89.7
MS.gene97948.t1	AT1G24620	35.211	142	88	2	9	149	34	172	6.71e-23	89.7
MS.gene97948.t1	AT4G14640	41.509	106	60	1	6	111	7	110	1.09e-21	85.1
MS.gene97948.t1	AT5G37770	30.000	150	100	2	2	149	10	156	8.73e-20	81.3
MS.gene97948.t1	AT5G37770	30.000	150	100	2	2	149	10	156	8.73e-20	81.3
MS.gene97948.t1	AT3G22930	40.385	104	60	1	6	109	29	130	2.63e-19	79.0
MS.gene97948.t1	AT3G22930	42.857	70	37	1	83	149	28	97	1.57e-11	58.9
MS.gene97948.t1	AT4G03290	34.028	144	88	3	12	150	5	146	3.53e-19	79.3
MS.gene97948.t1	AT1G76040	35.099	151	90	3	6	154	410	554	5.62e-19	83.2
MS.gene97948.t1	AT2G41090	33.566	143	90	1	6	148	6	143	1.41e-18	78.6
MS.gene97948.t1	AT1G76040	35.099	151	90	3	6	154	172	316	1.77e-18	80.9
MS.gene97948.t1	AT1G76040	35.099	151	90	3	6	154	172	316	1.77e-18	80.9
MS.gene97948.t1	AT4G38230	33.793	145	91	3	6	150	353	492	2.60e-18	81.3
MS.gene97948.t1	AT1G35670	33.103	145	92	3	6	150	325	464	3.38e-18	80.9
MS.gene97948.t1	AT4G37010	28.571	147	103	1	6	152	21	165	5.28e-18	76.6
MS.gene97948.t1	AT4G37010	28.571	147	103	1	6	152	25	169	6.68e-18	76.6
MS.gene97948.t1	AT1G05990	32.867	143	87	3	12	149	5	143	9.59e-18	75.5
MS.gene97948.t1	AT2G15680	25.714	140	100	1	10	149	48	183	2.02e-17	75.5
MS.gene97948.t1	AT4G38230	33.793	145	91	3	6	150	179	318	2.25e-17	77.8
MS.gene97948.t1	AT4G09570	31.724	145	94	2	6	150	324	463	2.27e-17	78.6
MS.gene97948.t1	AT2G43290	30.769	143	94	2	12	149	65	207	2.35e-17	75.9
MS.gene97948.t1	AT1G18210	27.536	138	94	1	11	148	22	153	2.60e-17	75.1
MS.gene97948.t1	AT1G18210	27.536	138	94	1	11	148	22	153	2.60e-17	75.1
MS.gene97948.t1	AT4G38230	33.793	145	91	3	6	150	323	462	3.45e-17	77.8
MS.gene97948.t1	AT4G38230	33.793	145	91	3	6	150	323	462	3.45e-17	77.8
MS.gene97948.t1	AT1G61950	30.556	144	92	3	7	148	399	536	4.19e-17	77.8
MS.gene97948.t1	AT4G04710	32.867	143	92	2	6	148	344	482	4.33e-17	77.8
MS.gene97948.t1	AT4G21940	32.414	145	90	3	6	148	400	538	5.40e-17	77.4
MS.gene97948.t1	AT4G04710	32.867	143	92	2	6	148	331	469	5.60e-17	77.4
MS.gene97948.t1	AT4G21940	32.414	145	90	3	6	148	400	538	5.82e-17	77.4
MS.gene97948.t1	AT4G04720	31.034	145	92	3	6	148	378	516	1.54e-16	76.3
MS.gene97948.t1	AT4G04720	31.034	145	92	3	6	148	378	516	1.54e-16	76.3
MS.gene97948.t1	AT3G50360	27.211	147	105	1	6	152	21	165	1.85e-16	72.8
MS.gene97948.t1	AT1G66400	29.787	141	95	2	10	148	13	151	2.54e-16	72.0
MS.gene97948.t1	AT2G41100	33.588	131	72	2	39	154	3	133	2.65e-16	72.8
MS.gene97948.t1	AT4G04710	33.562	146	87	3	6	148	317	455	3.31e-16	75.1
MS.gene97948.t1	AT2G41410	32.414	145	95	3	12	154	70	213	3.86e-16	72.8
MS.gene97948.t1	AT1G74740	30.405	148	97	4	9	155	361	503	5.52e-16	74.7
MS.gene97948.t1	AT4G04700	32.168	143	93	2	6	148	330	468	5.71e-16	74.3
MS.gene97948.t1	AT3G10190	32.090	134	86	3	17	148	75	205	5.91e-16	72.4
MS.gene97948.t1	AT1G12310	28.082	146	100	3	6	150	7	148	9.61e-16	70.5
MS.gene97948.t1	AT4G35310	31.081	148	97	3	6	153	396	538	1.06e-15	73.9
MS.gene97948.t1	AT4G35310	31.081	148	97	3	6	153	396	538	1.06e-15	73.9
MS.gene97948.t1	AT4G04710	32.414	145	92	3	6	148	344	484	1.18e-15	73.6
MS.gene97948.t1	AT1G50700	31.469	143	90	3	8	148	374	510	2.11e-15	72.8
MS.gene97948.t1	AT4G04695	29.730	148	100	2	6	153	330	473	2.20e-15	72.8
MS.gene97948.t1	AT2G38910	29.677	155	104	3	6	160	433	582	2.38e-15	72.8
MS.gene97948.t1	AT4G12860	30.216	139	93	2	12	148	5	141	2.40e-15	69.3
MS.gene97948.t1	AT1G62820	27.397	146	101	3	6	150	7	148	2.75e-15	68.9
MS.gene97948.t1	AT3G20410	32.867	143	88	3	8	148	392	528	3.32e-15	72.4
MS.gene97948.t1	AT3G20410	32.867	143	88	3	8	148	392	528	3.32e-15	72.4
MS.gene97948.t1	AT2G17290	32.432	148	95	3	6	153	384	526	3.55e-15	72.4
MS.gene97948.t1	AT2G17290	32.432	148	95	3	6	153	384	526	3.55e-15	72.4
MS.gene97948.t1	AT5G04870	28.571	147	100	3	6	152	449	590	3.75e-15	72.0
MS.gene97948.t1	AT5G23580	30.345	145	96	3	6	150	321	460	5.17e-15	71.6
MS.gene97948.t1	AT3G10660	28.571	147	100	3	6	152	485	626	5.57e-15	71.6
MS.gene97948.t1	AT3G10660	28.571	147	100	3	6	152	485	626	5.57e-15	71.6
MS.gene97948.t1	AT3G51850	28.000	150	104	2	6	155	353	498	6.11e-15	71.6
MS.gene97948.t1	AT5G17470	27.857	140	91	2	15	149	5	139	6.34e-15	68.2
MS.gene97948.t1	AT1G73630	26.087	138	96	2	12	149	20	151	8.78e-15	68.2
MS.gene97948.t1	AT5G12180	29.870	154	104	2	6	159	372	521	9.24e-15	70.9
MS.gene97948.t1	AT1G18890	30.405	148	97	4	9	155	365	507	3.32e-14	69.3
MS.gene97948.t1	AT5G19360	29.530	149	101	2	6	154	367	511	3.35e-14	69.3
MS.gene97948.t1	AT3G59440	30.405	148	90	4	13	155	52	191	3.41e-14	67.4
MS.gene97948.t1	AT2G41100	48.333	60	31	0	90	149	15	74	7.09e-14	65.5
MS.gene97948.t1	AT4G23650	32.026	153	96	4	6	156	377	523	8.14e-14	68.2
MS.gene97948.t1	AT4G04740	28.966	145	95	3	6	148	367	505	1.55e-13	67.4
MS.gene97948.t1	AT4G04740	28.966	145	95	3	6	148	367	505	1.55e-13	67.4
MS.gene97948.t1	AT4G04740	28.966	145	95	3	6	148	367	505	1.55e-13	67.4
MS.gene97948.t1	AT4G04740	28.966	145	95	3	6	148	367	505	1.55e-13	67.4
MS.gene97948.t1	AT4G04740	28.966	145	95	3	6	148	367	505	1.55e-13	67.4
MS.gene97948.t1	AT4G04740	28.966	145	95	3	6	148	367	505	1.55e-13	67.4
MS.gene97948.t1	AT2G31500	31.373	153	96	6	7	155	366	513	1.99e-13	67.4
MS.gene97948.t1	AT5G42380	28.058	139	99	1	10	148	47	184	3.62e-13	64.3
MS.gene97948.t1	AT3G07490	31.126	151	94	3	12	157	5	150	4.61e-13	63.5
MS.gene97948.t1	AT2G41860	31.655	139	91	3	17	155	364	498	7.09e-13	65.5
MS.gene97948.t1	AT2G41860	31.655	139	91	3	17	155	364	498	7.66e-13	65.5
MS.gene97948.t1	AT1G50700	26.627	169	90	4	8	148	374	536	3.73e-12	63.5
MS.gene97948.t1	AT3G03410	27.820	133	85	1	16	148	6	127	1.26e-11	58.9
MS.gene97948.t1	AT1G76650	28.169	142	99	1	7	148	38	176	1.66e-11	59.7
MS.gene97948.t1	AT1G76650	28.169	142	99	1	7	148	38	176	1.66e-11	59.7
MS.gene97948.t1	AT3G03400	27.273	132	90	2	13	141	6	134	1.74e-11	58.9
MS.gene97948.t1	AT2G36180	25.352	142	95	2	13	148	1	137	4.97e-11	57.8
MS.gene97948.t1	AT1G76040	34.694	98	61	1	6	103	410	504	6.91e-11	59.7

Find 45 sgRNAs with CRISPR-Local

Find 49 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAATGAGTTTGCTACCATTT+TGG	0.181113	8.4:-33495103	MS.gene97948:CDS
CATCAATCAAGAACAGCTTT+TGG	0.251625	8.4:-33495280	MS.gene97948:CDS
AGCAGCTGATTTAGCCAAAA+TGG	0.298445	8.4:+33495089	None:intergenic
TGCCGGATCCATGGCAAAGA+TGG	0.365837	8.4:-33495202	MS.gene97948:CDS
GTTTGATTTGATCATCGGTT+TGG	0.374067	8.4:+33495514	None:intergenic
ATCACCGCGGCTGAGCTTGC+CGG	0.433712	8.4:-33495219	MS.gene97948:CDS
GCCCATCTTTGCCATGGATC+CGG	0.441339	8.4:+33495200	None:intergenic
GCAAGCTCATGGTAGGTTAG+AGG	0.441897	8.4:+33495174	None:intergenic
TCGAGCTCGCGGCACTCCTC+CGG	0.447254	8.4:-33495434	MS.gene97948:CDS
CGCCGGTTGGTTTGATGCCG+AGG	0.448671	8.4:+33495409	None:intergenic
TAATTGTTTGATTTGATCAT+CGG	0.450882	8.4:+33495509	None:intergenic
GTTGTCCATGTTGTTGAGTA+GGG	0.466335	8.4:+33495374	None:intergenic
TTGGTTTGATGCCGAGGGAC+CGG	0.472098	8.4:+33495415	None:intergenic
CCGCGAGCTCGAGGTGGGTT+AGG	0.481076	8.4:+33495445	None:intergenic
TCGTTTGATCGCGATGGTAA+CGG	0.490416	8.4:-33495246	MS.gene97948:CDS
GGCTGAGCTTGCCGGATCCA+TGG	0.491295	8.4:-33495211	MS.gene97948:CDS
TGTTGTCCATGTTGTTGAGT+AGG	0.498019	8.4:+33495373	None:intergenic
GCCGGATCCATGGCAAAGAT+GGG	0.510478	8.4:-33495201	MS.gene97948:CDS
TCCCTCGGCATCAAACCAAC+CGG	0.513632	8.4:-33495411	MS.gene97948:CDS
AGAACATCCTCATTCATGTC+GGG	0.527703	8.4:+33495303	None:intergenic
GCGGCACTCCTCCGGTCCCT+CGG	0.535843	8.4:-33495426	MS.gene97948:CDS
CCATGAGCTTGCTAATATGA+TGG	0.541143	8.4:-33495163	MS.gene97948:CDS
GCCGGTTGGTTTGATGCCGA+GGG	0.544994	8.4:+33495410	None:intergenic
AGGATGGCCCATCTTTGCCA+TGG	0.569433	8.4:+33495194	None:intergenic
GGAGGAGTGCCGCGAGCTCG+AGG	0.571654	8.4:+33495436	None:intergenic
TTTCGCTCGTTTGATCGCGA+TGG	0.574765	8.4:-33495252	MS.gene97948:CDS
CCATCATATTAGCAAGCTCA+TGG	0.576261	8.4:+33495163	None:intergenic
ATCGGTTTGGAGCATTGACA+TGG	0.582487	8.4:+33495527	None:intergenic
GAGTGCCGCGAGCTCGAGGT+GGG	0.605708	8.4:+33495440	None:intergenic
CATATTAGCAAGCTCATGGT+AGG	0.608067	8.4:+33495167	None:intergenic
GTTTGATGCCGAGGGACCGG+AGG	0.608754	8.4:+33495418	None:intergenic
GAGAACATCCTCATTCATGT+CGG	0.610534	8.4:+33495302	None:intergenic
GAGGTGGGTTAGGCTGCCGT+CGG	0.614738	8.4:+33495455	None:intergenic
GCATAAAGTTCATCGCCGGT+TGG	0.617815	8.4:+33495396	None:intergenic
GGAGTGCCGCGAGCTCGAGG+TGG	0.624930	8.4:+33495439	None:intergenic
CCTAACCCACCTCGAGCTCG+CGG	0.627109	8.4:-33495445	MS.gene97948:CDS
TAGGGCATAAAGTTCATCGC+CGG	0.634207	8.4:+33495392	None:intergenic
GCTCATGGTAGGTTAGAGGA+TGG	0.645689	8.4:+33495178	None:intergenic
TATTATGCCCGACATGAATG+AGG	0.654576	8.4:-33495310	MS.gene97948:CDS
TTATGCCCTACTCAACAACA+TGG	0.655411	8.4:-33495379	MS.gene97948:CDS
GGATCCGGCAAGCTCAGCCG+CGG	0.659184	8.4:+33495215	None:intergenic
AACATGGACAACAATCACAA+CGG	0.662571	8.4:-33495363	MS.gene97948:CDS
GAAGCTGATAGCAATGGTGA+TGG	0.671640	8.4:-33495138	MS.gene97948:CDS
ATGGCTGAAGCTGATAGCAA+TGG	0.696973	8.4:-33495144	MS.gene97948:CDS
TGGTAACGGTTACATCACCG+CGG	0.788065	8.4:-33495232	MS.gene97948:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TAATTGTTTGATTTGATCAT+CGG	+	chr8.4:33495081-33495100	None:intergenic	20.0%
	AACATGGACAACAATCACAA+CGG	-	chr8.4:33495224-33495243	MS.gene97948:CDS	35.0%
!	CATCAATCAAGAACAGCTTT+TGG	-	chr8.4:33495307-33495326	MS.gene97948:CDS	35.0%
!!	CATATTCAAGCGTTTTGACA+TGG	-	chr8.4:33495106-33495125	MS.gene97948:CDS	35.0%
!!	GTTTGATTTGATCATCGGTT+TGG	+	chr8.4:33495076-33495095	None:intergenic	35.0%
!!!	AAATCAGCTGCTGATTTTCT+TGG	-	chr8.4:33495509-33495528	MS.gene97948:CDS	35.0%
!!!	CAATGAGTTTGCTACCATTT+TGG	-	chr8.4:33495484-33495503	MS.gene97948:CDS	35.0%
!!!	TGCTGATTTTCTTGGTGTTA+AGG	-	chr8.4:33495517-33495536	MS.gene97948:CDS	35.0%
	AGAACATCCTCATTCATGTC+GGG	+	chr8.4:33495287-33495306	None:intergenic	40.0%
	CATATTAGCAAGCTCATGGT+AGG	+	chr8.4:33495423-33495442	None:intergenic	40.0%
	CCATCATATTAGCAAGCTCA+TGG	+	chr8.4:33495427-33495446	None:intergenic	40.0%
	GAGAACATCCTCATTCATGT+CGG	+	chr8.4:33495288-33495307	None:intergenic	40.0%
	GTTGTCCATGTTGTTGAGTA+GGG	+	chr8.4:33495216-33495235	None:intergenic	40.0%
	TATTATGCCCGACATGAATG+AGG	-	chr8.4:33495277-33495296	MS.gene97948:CDS	40.0%
	TGTTGTCCATGTTGTTGAGT+AGG	+	chr8.4:33495217-33495236	None:intergenic	40.0%
	TTATGCCCTACTCAACAACA+TGG	-	chr8.4:33495208-33495227	MS.gene97948:CDS	40.0%
!	AGCAGCTGATTTAGCCAAAA+TGG	+	chr8.4:33495501-33495520	None:intergenic	40.0%
!	CAATCAAGAACAGCTTTTGG+AGG	-	chr8.4:33495310-33495329	MS.gene97948:CDS	40.0%
!!	CCATGAGCTTGCTAATATGA+TGG	-	chr8.4:33495424-33495443	MS.gene97948:CDS	40.0%
	ATGGCTGAAGCTGATAGCAA+TGG	-	chr8.4:33495443-33495462	MS.gene97948:CDS	45.0%
	GAAGCTGATAGCAATGGTGA+TGG	-	chr8.4:33495449-33495468	MS.gene97948:CDS	45.0%
	TAGGGCATAAAGTTCATCGC+CGG	+	chr8.4:33495198-33495217	None:intergenic	45.0%
	TCGTTTGATCGCGATGGTAA+CGG	-	chr8.4:33495341-33495360	MS.gene97948:CDS	45.0%
!!	CGTTTTGACATGGATTCCGA+CGG	-	chr8.4:33495116-33495135	MS.gene97948:CDS	45.0%
	GCAAGCTCATGGTAGGTTAG+AGG	+	chr8.4:33495416-33495435	None:intergenic	50.0%
	GCATAAAGTTCATCGCCGGT+TGG	+	chr8.4:33495194-33495213	None:intergenic	50.0%
	GCTCATGGTAGGTTAGAGGA+TGG	+	chr8.4:33495412-33495431	None:intergenic	50.0%
	TTTCGCTCGTTTGATCGCGA+TGG	-	chr8.4:33495335-33495354	MS.gene97948:CDS	50.0%
!!	TGGTAACGGTTACATCACCG+CGG	-	chr8.4:33495355-33495374	MS.gene97948:CDS	50.0%
	AGGATGGCCCATCTTTGCCA+TGG	+	chr8.4:33495396-33495415	None:intergenic	55.0%
	GCCCATCTTTGCCATGGATC+CGG	+	chr8.4:33495390-33495409	None:intergenic	55.0%
	GCCGGATCCATGGCAAAGAT+GGG	-	chr8.4:33495386-33495405	MS.gene97948:CDS	55.0%
	TCCCTCGGCATCAAACCAAC+CGG	-	chr8.4:33495176-33495195	MS.gene97948:CDS	55.0%
	TGCCGGATCCATGGCAAAGA+TGG	-	chr8.4:33495385-33495404	MS.gene97948:CDS	55.0%
!	TTGGTTTGATGCCGAGGGAC+CGG	+	chr8.4:33495175-33495194	None:intergenic	55.0%
!!	GCCGGTTGGTTTGATGCCGA+GGG	+	chr8.4:33495180-33495199	None:intergenic	60.0%
	ATCACCGCGGCTGAGCTTGC+CGG	-	chr8.4:33495368-33495387	MS.gene97948:CDS	65.0%
	CCTAACCCACCTCGAGCTCG+CGG	-	chr8.4:33495142-33495161	MS.gene97948:CDS	65.0%
	GGCTGAGCTTGCCGGATCCA+TGG	-	chr8.4:33495376-33495395	MS.gene97948:CDS	65.0%
	GTTTGATGCCGAGGGACCGG+AGG	+	chr8.4:33495172-33495191	None:intergenic	65.0%
!!	CGCCGGTTGGTTTGATGCCG+AGG	+	chr8.4:33495181-33495200	None:intergenic	65.0%
!!	GAGGTGGGTTAGGCTGCCGT+CGG	+	chr8.4:33495135-33495154	None:intergenic	65.0%
	GGATCCGGCAAGCTCAGCCG+CGG	+	chr8.4:33495375-33495394	None:intergenic	70.0%
	TCGAGCTCGCGGCACTCCTC+CGG	-	chr8.4:33495153-33495172	MS.gene97948:CDS	70.0%
!	CCGCGAGCTCGAGGTGGGTT+AGG	+	chr8.4:33495145-33495164	None:intergenic	70.0%
!	GAGTGCCGCGAGCTCGAGGT+GGG	+	chr8.4:33495150-33495169	None:intergenic	70.0%
	GCGGCACTCCTCCGGTCCCT+CGG	-	chr8.4:33495161-33495180	MS.gene97948:CDS	75.0%
!!	GGAGGAGTGCCGCGAGCTCG+AGG	+	chr8.4:33495154-33495173	None:intergenic	75.0%
!!	GGAGTGCCGCGAGCTCGAGG+TGG	+	chr8.4:33495151-33495170	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.4	gene	33495062	33495547	33495062	ID=MS.gene97948
chr8.4	mRNA	33495062	33495547	33495062	ID=MS.gene97948.t1;Parent=MS.gene97948
chr8.4	exon	33495062	33495547	33495062	ID=MS.gene97948.t1.exon1;Parent=MS.gene97948.t1
chr8.4	CDS	33495062	33495547	33495062	ID=cds.MS.gene97948.t1;Parent=MS.gene97948.t1

Gene Sequence

>MS.gene97948

ATGTCAATGCTCCAAACCGATGATCAAATCAAACAATTAAACGACATATTCAAGCGTTTTGACATGGATTCCGACGGCAGCCTAACCCACCTCGAGCTCGCGGCACTCCTCCGGTCCCTCGGCATCAAACCAACCGGCGATGAACTTTATGCCCTACTCAACAACATGGACAACAATCACAACGGATACATCGAATTCGACGAGCTTGTTAATGCTATTATGCCCGACATGAATGAGGATGTTCTCATCAATCAAGAACAGCTTTTGGAGGTTTTTCGCTCGTTTGATCGCGATGGTAACGGTTACATCACCGCGGCTGAGCTTGCCGGATCCATGGCAAAGATGGGCCATCCTCTAACCTACCATGAGCTTGCTAATATGATGGCTGAAGCTGATAGCAATGGTGATGGTGTTATTAGTTTCAATGAGTTTGCTACCATTTTGGCTAAATCAGCTGCTGATTTTCTTGGTGTTAAGGTGCAATAG

Protein sequence

>MS.gene97948.t1

MSMLQTDDQIKQLNDIFKRFDMDSDGSLTHLELAALLRSLGIKPTGDELYALLNNMDNNHNGYIEFDELVNAIMPDMNEDVLINQEQLLEVFRSFDRDGNGYITAAELAGSMAKMGHPLTYHELANMMAEADSNGDGVISFNEFATILAKSAADFLGVKVQ