AlfalfaGEDB | MS.gene61009

M. sativa cultivar XinJiangDaYe / MS.gene61009

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene61009.t1	XP_024627549.1	100	164	0	0	1	164	1	164	8.20E-65	256.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene61009.t1	Q9AWK2	64.5	152	54	0	10	161	57	208	3.0e-47	189.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene61009.t1	G7LH05	100.0	164	0	0	1	164	1	164	5.9e-65	256.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene61009	MS.gene98294	PPI
MS.gene61009	MS.gene64316	PPI
MS.gene61009	MS.gene64313	PPI
MS.gene46886	MS.gene61009	PPI
MS.gene61009	MS.gene061261	PPI
MS.gene61009	MS.gene036930	PPI
MS.gene21155	MS.gene61009	PPI
MS.gene61009	MS.gene21932	PPI
MS.gene61009	MS.gene026618	PPI
MS.gene61009	MS.gene53648	PPI
MS.gene61009	MS.gene015470	PPI
MS.gene61009	MS.gene008831	PPI
MS.gene61009	MS.gene55545	PPI
MS.gene61009	MS.gene056461	PPI
MS.gene61009	MS.gene64310	PPI
MS.gene61009	MS.gene29459	PPI
MS.gene64324	MS.gene61009	PPI
MS.gene022455	MS.gene61009	PPI
MS.gene61009	MS.gene35562	PPI
MS.gene61009	MS.gene92775	PPI
MS.gene61009	MS.gene53662	PPI
MS.gene61009	MS.gene63281	PPI
MS.gene61009	MS.gene060446	PPI
MS.gene61009	MS.gene013748	PPI
MS.gene61009	MS.gene008225	PPI
MS.gene61009	MS.gene21696	PPI
MS.gene61009	MS.gene29793	PPI
MS.gene61009	MS.gene05284	PPI
MS.gene61009	MS.gene22553	PPI
MS.gene61009	MS.gene074045	PPI
MS.gene61009	MS.gene03228	PPI
MS.gene61009	MS.gene000738	PPI
MS.gene004899	MS.gene61009	PPI
MS.gene61009	MS.gene46237	PPI
MS.gene61009	MS.gene056383	PPI
MS.gene61009	MS.gene64317	PPI
MS.gene61009	MS.gene025777	PPI
MS.gene61009	MS.gene63000	PPI
MS.gene61009	MS.gene93087	PPI
MS.gene61009	MS.gene046988	PPI
MS.gene61009	MS.gene057293	PPI
MS.gene61009	MS.gene74452	PPI
MS.gene61009	MS.gene09934	PPI
MS.gene61009	MS.gene58906	PPI
MS.gene61009	MS.gene79028	PPI
MS.gene61009	MS.gene64311	PPI
MS.gene68345	MS.gene61009	PPI
MS.gene61009	MS.gene49271	PPI
MS.gene61009	MS.gene053319	PPI
MS.gene61009	MS.gene026940	PPI
MS.gene61009	MS.gene000724	PPI
MS.gene61009	MS.gene65954	PPI
MS.gene040127	MS.gene61009	PPI
MS.gene62258	MS.gene61009	PPI
MS.gene61009	MS.gene98295	PPI
MS.gene61009	MS.gene022456	PPI
MS.gene61009	MS.gene001246	PPI
MS.gene61009	MS.gene64327	PPI
MS.gene61009	MS.gene28338	PPI
MS.gene61009	MS.gene041795	PPI
MS.gene61009	MS.gene85596	PPI
MS.gene61009	MS.gene96922	PPI
MS.gene61009	MS.gene025797	PPI
MS.gene61009	MS.gene21931	PPI
MS.gene61009	MS.gene27516	PPI
MS.gene61009	MS.gene64314	PPI
MS.gene61009	MS.gene09960	PPI
MS.gene61009	MS.gene94551	PPI
MS.gene040331	MS.gene61009	PPI
MS.gene61009	MS.gene62540	PPI
MS.gene61009	MS.gene074100	PPI
MS.gene58860	MS.gene61009	PPI
MS.gene61009	MS.gene53650	PPI
MS.gene61009	MS.gene02545	PPI
MS.gene61009	MS.gene04915	PPI
MS.gene64327	MS.gene61009	PPI
MS.gene64307	MS.gene61009	PPI
MS.gene61009	MS.gene057167	PPI
MS.gene04917	MS.gene61009	PPI
MS.gene61009	MS.gene93763	PPI
MS.gene61009	MS.gene49270	PPI
MS.gene61009	MS.gene64307	PPI
MS.gene61009	MS.gene024717	PPI
MS.gene61009	MS.gene29794	PPI
MS.gene61009	MS.gene71511	PPI
MS.gene008225	MS.gene61009	PPI
MS.gene61009	MS.gene033361	PPI
MS.gene61009	MS.gene87673	PPI
MS.gene61009	MS.gene53659	PPI
MS.gene011400	MS.gene61009	PPI
MS.gene61009	MS.gene061768	PPI
MS.gene61009	MS.gene89216	PPI
MS.gene61009	MS.gene64308	PPI
MS.gene61009	MS.gene47195	PPI
MS.gene61009	MS.gene47134	PPI
MS.gene61009	MS.gene017446	PPI
MS.gene61009	MS.gene96914	PPI
MS.gene61009	MS.gene96913	PPI
MS.gene35563	MS.gene61009	PPI
MS.gene61009	MS.gene07422	PPI
MS.gene97948	MS.gene61009	PPI
MS.gene61009	MS.gene062239	PPI
MS.gene55496	MS.gene61009	PPI
MS.gene003880	MS.gene61009	PPI
MS.gene54637	MS.gene61009	PPI
MS.gene000738	MS.gene61009	PPI
MS.gene67281	MS.gene61009	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene61009.t1	MTR_8g066630	100.000	164	0	0	1	164	1	164	8.45e-120	335
MS.gene61009.t1	MTR_4g112460	51.948	154	71	2	7	160	3	153	8.44e-51	160
MS.gene61009.t1	MTR_8g069915	52.349	149	70	1	12	160	7	154	3.89e-50	159
MS.gene61009.t1	MTR_5g088320	46.622	148	76	1	9	156	4	148	1.20e-43	142
MS.gene61009.t1	MTR_6g025320	45.946	148	77	1	9	156	4	148	3.69e-43	140
MS.gene61009.t1	MTR_7g087610	46.575	146	75	1	9	154	4	146	5.71e-43	140
MS.gene61009.t1	MTR_1g076650	44.898	147	78	1	10	156	5	148	1.54e-40	134
MS.gene61009.t1	MTR_1g041285	43.537	147	80	1	10	156	5	148	5.58e-40	132
MS.gene61009.t1	MTR_0168s0120	46.087	115	59	1	42	156	1	112	7.38e-32	110
MS.gene61009.t1	MTR_6g025320	46.087	115	59	1	42	156	1	112	7.38e-32	110
MS.gene61009.t1	MTR_1g071150	36.806	144	87	1	9	152	4	143	5.11e-31	109
MS.gene61009.t1	MTR_7g115040	37.838	148	89	1	10	157	5	149	3.67e-29	105
MS.gene61009.t1	MTR_4g067270	36.986	146	87	3	16	159	4	146	3.25e-28	102
MS.gene61009.t1	MTR_7g089760	38.356	146	85	2	16	159	4	146	2.16e-27	100
MS.gene61009.t1	MTR_8g107110	35.915	142	87	2	15	156	22	159	1.82e-26	98.6
MS.gene61009.t1	MTR_5g079340	35.507	138	85	2	17	154	4	137	5.93e-26	96.7
MS.gene61009.t1	MTR_1g032070	37.063	143	87	1	17	159	46	185	1.42e-25	97.1
MS.gene61009.t1	MTR_1g032070	44.286	70	38	1	83	152	37	105	2.55e-12	62.4
MS.gene61009.t1	MTR_3g055570	36.054	147	76	1	9	155	44	172	2.21e-25	96.3
MS.gene61009.t1	MTR_5g011850	36.170	141	85	3	10	150	5	140	5.18e-25	94.4
MS.gene61009.t1	MTR_8g105230	40.299	134	77	1	17	150	36	166	1.35e-24	94.4
MS.gene61009.t1	MTR_8g105230	43.939	66	37	0	93	158	36	101	3.95e-12	61.6
MS.gene61009.t1	MTR_6g079570	34.266	143	89	2	15	156	24	162	1.04e-23	91.7
MS.gene61009.t1	MTR_1g046950	34.532	139	90	1	17	155	4	141	1.86e-23	90.1
MS.gene61009.t1	MTR_3g067610	34.043	141	86	2	17	157	5	138	3.26e-23	89.4
MS.gene61009.t1	MTR_3g067610	41.935	62	36	0	91	152	3	64	4.07e-11	57.8
MS.gene61009.t1	MTR_5g027000	33.566	143	92	1	14	156	19	158	8.42e-23	89.0
MS.gene61009.t1	MTR_2g098890	34.247	146	93	2	16	159	63	207	1.17e-22	90.1
MS.gene61009.t1	MTR_1g047100	31.429	140	94	1	17	156	4	141	2.73e-22	87.0
MS.gene61009.t1	MTR_6g023460	31.884	138	90	1	13	150	4	137	3.02e-22	87.0
MS.gene61009.t1	MTR_1g096490	36.620	142	84	2	9	150	327	462	4.59e-21	89.0
MS.gene61009.t1	MTR_7g090450	34.783	138	88	2	16	151	72	209	1.26e-20	84.7
MS.gene61009.t1	MTR_4g115170	31.210	157	93	3	17	158	64	220	1.97e-20	84.3
MS.gene61009.t1	MTR_1g026190	34.839	155	90	4	10	161	380	526	2.21e-20	87.0
MS.gene61009.t1	MTR_4g086260	30.070	143	95	1	15	157	55	192	2.25e-20	83.6
MS.gene61009.t1	MTR_7g075040	31.818	154	99	3	10	157	40	193	2.28e-20	83.6
MS.gene61009.t1	MTR_7g074020	29.114	158	109	1	2	159	15	169	3.86e-20	82.4
MS.gene61009.t1	MTR_3g098090	34.266	143	88	2	9	151	329	465	4.11e-20	86.3
MS.gene61009.t1	MTR_3g055520	33.333	144	78	1	9	152	44	169	4.76e-20	82.4
MS.gene61009.t1	MTR_5g099240	35.461	141	85	2	10	150	394	528	5.56e-20	86.3
MS.gene61009.t1	MTR_7g106710	35.461	141	85	2	10	150	433	567	6.03e-20	85.9
MS.gene61009.t1	MTR_3g055585	34.028	144	77	1	9	152	44	169	6.34e-20	82.0
MS.gene61009.t1	MTR_6g007613	29.114	158	109	1	2	159	14	168	3.81e-19	79.7
MS.gene61009.t1	MTR_3g098070	33.566	143	89	2	9	151	326	462	3.87e-19	83.6
MS.gene61009.t1	MTR_5g099240	35.211	142	86	2	10	151	322	457	4.33e-19	83.6
MS.gene61009.t1	MTR_4g103650	33.577	137	81	2	17	150	2	131	5.25e-19	78.6
MS.gene61009.t1	MTR_1g054865	32.667	150	95	2	10	159	459	602	6.95e-19	82.8
MS.gene61009.t1	MTR_7g068710	29.730	148	100	1	10	157	354	497	7.77e-19	82.8
MS.gene61009.t1	MTR_3g089070	33.582	134	77	2	21	150	10	135	1.06e-18	77.8
MS.gene61009.t1	MTR_3g089090	33.582	134	77	2	21	150	9	134	1.06e-18	77.8
MS.gene61009.t1	MTR_4g103655	33.577	137	81	2	17	150	6	135	1.08e-18	77.8
MS.gene61009.t1	MTR_4g103630	32.847	137	82	2	17	150	6	135	3.04e-18	76.6
MS.gene61009.t1	MTR_7g074020	31.387	137	91	1	2	138	15	148	5.02e-18	76.6
MS.gene61009.t1	MTR_5g009830	34.722	144	85	3	10	151	364	500	5.69e-18	80.5
MS.gene61009.t1	MTR_5g017510	30.435	138	89	3	17	152	48	180	6.41e-18	77.0
MS.gene61009.t1	MTR_5g017560	30.435	138	89	3	17	152	48	180	6.41e-18	77.0
MS.gene61009.t1	MTR_5g092810	31.757	148	96	2	10	157	390	532	8.60e-18	79.7
MS.gene61009.t1	MTR_8g095440	32.168	143	91	2	9	151	327	463	1.27e-17	79.3
MS.gene61009.t1	MTR_1g041150	33.803	142	88	2	10	151	416	551	1.52e-17	79.0
MS.gene61009.t1	MTR_1g055255	32.624	141	89	2	10	150	422	556	3.56e-17	78.2
MS.gene61009.t1	MTR_8g036075	31.250	144	94	3	12	150	44	187	4.72e-17	75.1
MS.gene61009.t1	MTR_0028s0170	32.394	142	91	2	10	151	376	512	6.19e-17	77.4
MS.gene61009.t1	MTR_3g051770	31.169	154	96	2	10	157	381	530	7.04e-17	77.0
MS.gene61009.t1	MTR_6g007613	30.657	137	92	1	2	138	14	147	8.64e-17	73.2
MS.gene61009.t1	MTR_8g099095	34.028	144	86	3	10	151	364	500	1.38e-16	76.3
MS.gene61009.t1	MTR_1g030440	34.247	146	83	2	16	154	21	160	2.45e-16	72.4
MS.gene61009.t1	MTR_5g017550	28.986	138	94	1	17	154	48	181	3.75e-16	72.4
MS.gene61009.t1	MTR_7g106710	34.351	131	80	2	10	140	433	557	4.46e-16	74.7
MS.gene61009.t1	MTR_4g132070	31.333	150	94	3	10	157	389	531	5.54e-16	74.7
MS.gene61009.t1	MTR_4g107490	26.897	145	102	1	13	157	374	514	8.52e-16	73.9
MS.gene61009.t1	MTR_8g078270	32.374	139	89	2	18	155	54	188	9.56e-16	71.2
MS.gene61009.t1	MTR_5g089320	29.577	142	95	2	10	151	366	502	1.26e-15	73.6
MS.gene61009.t1	MTR_4g122260	28.889	135	93	2	16	148	15	148	4.50e-14	66.2
MS.gene61009.t1	MTR_8g070510	29.268	164	93	5	12	155	49	209	7.04e-14	67.0
MS.gene61009.t1	MTR_3g055480	43.478	69	35	1	82	150	38	102	8.98e-14	64.3
MS.gene61009.t1	MTR_8g070510	29.268	164	93	5	12	155	53	213	9.32e-14	66.6
MS.gene61009.t1	MTR_1g052530	26.351	148	105	1	10	157	350	493	1.90e-13	67.4
MS.gene61009.t1	MTR_4g132040	27.397	146	99	3	13	157	396	535	3.46e-13	66.6
MS.gene61009.t1	MTR_7g074240	29.299	157	96	3	18	162	25	178	4.12e-13	63.9
MS.gene61009.t1	MTR_5g022030	28.947	152	99	3	10	158	399	544	6.26e-13	65.9
MS.gene61009.t1	MTR_7g091890	25.676	148	106	1	10	157	356	499	4.27e-12	63.5
MS.gene61009.t1	MTR_3g055510	35.821	67	43	0	92	158	71	137	8.89e-12	59.7
MS.gene61009.t1	MTR_4g066660	26.950	141	98	2	10	150	370	505	1.60e-11	61.6
MS.gene61009.t1	MTR_3g055490	38.028	71	44	0	9	79	44	114	1.76e-11	58.5
MS.gene61009.t1	MTR_3g088655	30.065	153	96	4	16	157	7	159	3.10e-11	58.5
MS.gene61009.t1	MTR_5g008695	26.786	112	81	1	41	152	1	111	6.34e-11	57.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene61009.t1	AT1G32250	76.074	163	34	3	6	163	3	165	3.05e-84	245
MS.gene61009.t1	AT3G03000	76.875	160	35	1	4	163	7	164	4.81e-80	234
MS.gene61009.t1	AT1G18530	53.020	149	69	1	12	160	2	149	4.55e-49	155
MS.gene61009.t1	AT3G25600	52.027	148	70	1	13	160	8	154	8.69e-48	152
MS.gene61009.t1	AT5G37780	46.622	148	76	1	9	156	4	148	1.22e-43	142
MS.gene61009.t1	AT1G66410	46.622	148	76	1	9	156	4	148	1.22e-43	142
MS.gene61009.t1	AT3G56800	46.622	148	76	1	9	156	4	148	1.26e-43	142
MS.gene61009.t1	AT2G27030	46.622	148	76	1	9	156	4	148	1.26e-43	142
MS.gene61009.t1	AT2G41110	46.622	148	76	1	9	156	4	148	1.26e-43	142
MS.gene61009.t1	AT2G27030	47.260	146	74	1	9	154	4	146	3.03e-43	142
MS.gene61009.t1	AT3G43810	45.946	148	77	1	9	156	4	148	3.87e-43	140
MS.gene61009.t1	AT5G21274	45.270	148	78	1	9	156	4	148	1.36e-42	139
MS.gene61009.t1	AT3G43810	46.575	146	75	1	9	154	4	146	3.10e-42	140
MS.gene61009.t1	AT2G41110	43.750	160	75	2	9	156	4	160	7.10e-40	132
MS.gene61009.t1	AT4G14640	44.286	140	75	1	13	152	9	145	9.10e-40	132
MS.gene61009.t1	AT5G37780	42.331	163	76	2	9	156	4	163	2.56e-39	131
MS.gene61009.t1	AT3G22930	43.836	146	79	1	9	154	27	169	1.52e-38	129
MS.gene61009.t1	AT5G37780	40.116	172	74	2	9	154	4	172	1.33e-37	127
MS.gene61009.t1	AT1G66410	43.671	158	76	2	9	156	4	158	3.80e-37	125
MS.gene61009.t1	AT5G37780	45.238	126	66	1	31	156	13	135	2.16e-34	117
MS.gene61009.t1	AT3G51920	38.514	148	88	1	12	159	7	151	1.48e-33	116
MS.gene61009.t1	AT2G41100	39.535	172	90	2	3	160	52	223	1.80e-33	120
MS.gene61009.t1	AT2G41100	35.772	123	66	2	41	150	1	123	1.57e-18	80.5
MS.gene61009.t1	AT2G41100	41.772	79	46	0	9	87	148	226	3.67e-14	68.6
MS.gene61009.t1	AT2G41100	39.535	172	90	2	3	160	52	223	1.80e-33	120
MS.gene61009.t1	AT2G41100	35.772	123	66	2	41	150	1	123	1.57e-18	80.5
MS.gene61009.t1	AT2G41100	41.772	79	46	0	9	87	148	226	3.67e-14	68.6
MS.gene61009.t1	AT2G41100	39.535	172	90	2	3	160	52	223	1.80e-33	120
MS.gene61009.t1	AT2G41100	35.772	123	66	2	41	150	1	123	1.57e-18	80.5
MS.gene61009.t1	AT2G41100	41.772	79	46	0	9	87	148	226	3.67e-14	68.6
MS.gene61009.t1	AT2G41100	39.535	172	90	2	3	160	87	258	3.18e-33	120
MS.gene61009.t1	AT2G41100	40.000	155	80	2	9	150	4	158	4.15e-32	117
MS.gene61009.t1	AT2G41100	41.772	79	46	0	9	87	183	261	4.34e-14	68.6
MS.gene61009.t1	AT2G41100	39.535	172	90	2	3	160	87	258	3.18e-33	120
MS.gene61009.t1	AT2G41100	40.000	155	80	2	9	150	4	158	4.15e-32	117
MS.gene61009.t1	AT2G41100	41.772	79	46	0	9	87	183	261	4.34e-14	68.6
MS.gene61009.t1	AT4G14640	42.857	126	69	1	31	156	9	131	4.30e-33	114
MS.gene61009.t1	AT3G43810	46.087	115	59	1	42	156	1	112	7.73e-32	110
MS.gene61009.t1	AT3G43810	46.087	115	59	1	42	156	1	112	7.73e-32	110
MS.gene61009.t1	AT1G66410	46.087	115	59	1	42	156	1	112	8.43e-32	110
MS.gene61009.t1	AT1G66410	46.087	115	59	1	42	156	1	112	8.43e-32	110
MS.gene61009.t1	AT2G41090	41.667	144	78	1	9	152	4	141	2.97e-31	111
MS.gene61009.t1	AT1G05990	35.135	148	92	2	16	161	4	149	2.33e-27	100
MS.gene61009.t1	AT4G03290	34.932	146	93	1	16	159	4	149	3.22e-26	97.8
MS.gene61009.t1	AT2G43290	35.762	151	93	2	16	162	64	214	4.14e-26	99.0
MS.gene61009.t1	AT3G59440	37.086	151	89	3	13	161	47	193	1.93e-25	96.7
MS.gene61009.t1	AT1G18210	31.579	152	97	1	4	155	10	154	1.93e-25	96.3
MS.gene61009.t1	AT1G18210	31.579	152	97	1	4	155	10	154	1.93e-25	96.3
MS.gene61009.t1	AT5G37770	31.034	145	99	1	15	158	15	159	1.37e-24	93.6
MS.gene61009.t1	AT5G37770	31.034	145	99	1	15	158	15	159	1.37e-24	93.6
MS.gene61009.t1	AT1G12310	36.170	141	85	2	10	150	6	141	8.16e-24	91.3
MS.gene61009.t1	AT3G07490	37.671	146	86	2	16	159	4	146	2.15e-23	90.5
MS.gene61009.t1	AT4G14640	38.393	112	66	1	6	117	2	110	3.04e-23	89.0
MS.gene61009.t1	AT3G22930	39.815	108	62	1	9	116	27	131	1.05e-22	87.8
MS.gene61009.t1	AT1G24620	36.552	145	89	1	14	158	34	175	1.14e-22	89.4
MS.gene61009.t1	AT1G24620	41.250	80	46	1	79	157	22	101	1.65e-11	60.1
MS.gene61009.t1	AT1G62820	34.752	141	87	2	10	150	6	141	1.31e-22	88.2
MS.gene61009.t1	AT4G12860	34.247	146	91	2	16	159	4	146	1.41e-22	88.2
MS.gene61009.t1	AT1G66400	31.429	140	95	1	15	154	13	151	3.97e-22	87.0
MS.gene61009.t1	AT1G73630	29.286	140	92	1	17	156	20	152	7.69e-22	86.7
MS.gene61009.t1	AT4G09570	36.620	142	84	2	9	150	322	457	1.71e-21	90.5
MS.gene61009.t1	AT1G35670	36.620	142	84	2	9	150	323	458	1.94e-21	90.1
MS.gene61009.t1	AT2G15680	29.577	142	95	1	15	156	48	184	4.39e-21	85.1
MS.gene61009.t1	AT2G17290	36.170	141	84	2	10	150	383	517	6.89e-21	88.6
MS.gene61009.t1	AT2G17290	36.170	141	84	2	10	150	383	517	6.89e-21	88.6
MS.gene61009.t1	AT5G42380	32.847	137	90	1	15	151	47	181	7.54e-21	84.7
MS.gene61009.t1	AT3G50360	32.168	143	94	1	17	159	27	166	1.85e-20	83.2
MS.gene61009.t1	AT4G37010	30.667	150	101	1	10	159	20	166	1.94e-20	83.2
MS.gene61009.t1	AT4G38230	35.461	141	85	2	10	150	352	486	1.95e-20	87.4
MS.gene61009.t1	AT4G37010	30.667	150	101	1	10	159	24	170	2.15e-20	83.2
MS.gene61009.t1	AT2G41100	36.641	131	69	2	44	160	3	133	6.46e-20	82.4
MS.gene61009.t1	AT2G41100	41.772	79	46	0	9	87	58	136	9.66e-15	68.9
MS.gene61009.t1	AT4G38230	35.211	142	86	2	10	151	178	313	7.58e-20	84.7
MS.gene61009.t1	AT4G38230	35.211	142	86	2	10	151	322	457	1.04e-19	85.1
MS.gene61009.t1	AT4G38230	35.211	142	86	2	10	151	322	457	1.04e-19	85.1
MS.gene61009.t1	AT4G35310	34.965	143	87	2	10	152	395	531	3.19e-19	84.0
MS.gene61009.t1	AT4G35310	34.965	143	87	2	10	152	395	531	3.19e-19	84.0
MS.gene61009.t1	AT3G50770	33.974	156	96	3	2	155	54	204	3.87e-19	80.5
MS.gene61009.t1	AT3G51850	29.730	148	100	1	10	157	352	495	4.46e-19	83.6
MS.gene61009.t1	AT2G38910	32.000	150	96	2	10	159	432	575	5.83e-19	83.2
MS.gene61009.t1	AT1G76040	32.895	152	97	2	10	161	171	317	1.23e-18	81.3
MS.gene61009.t1	AT1G76040	32.895	152	97	2	10	161	171	317	1.23e-18	81.3
MS.gene61009.t1	AT1G76040	32.895	152	97	2	10	161	409	555	1.89e-18	81.6
MS.gene61009.t1	AT1G74740	29.787	141	95	1	10	150	357	493	4.41e-18	80.9
MS.gene61009.t1	AT1G76640	30.405	148	94	2	8	151	13	155	6.99e-18	76.3
MS.gene61009.t1	AT3G10190	32.143	140	89	4	17	154	70	205	7.33e-18	77.4
MS.gene61009.t1	AT3G10190	39.024	82	47	3	78	156	53	134	7.09e-12	61.2
MS.gene61009.t1	AT3G03400	32.824	131	85	3	18	147	6	134	8.92e-18	75.5
MS.gene61009.t1	AT5G17470	26.241	141	99	2	18	156	3	140	1.84e-17	74.7
MS.gene61009.t1	AT5G19360	32.394	142	91	2	10	151	366	502	3.54e-17	78.2
MS.gene61009.t1	AT2G17890	32.237	152	94	3	10	158	408	553	4.04e-17	77.8
MS.gene61009.t1	AT4G04720	30.872	149	98	2	10	158	377	520	5.14e-17	77.8
MS.gene61009.t1	AT4G04720	30.872	149	98	2	10	158	377	520	5.14e-17	77.8
MS.gene61009.t1	AT2G36180	28.058	139	100	0	18	156	1	139	5.68e-17	73.6
MS.gene61009.t1	AT4G04740	30.612	147	97	2	4	150	360	501	5.78e-17	77.4
MS.gene61009.t1	AT4G04740	30.612	147	97	2	4	150	360	501	5.78e-17	77.4
MS.gene61009.t1	AT4G04740	30.612	147	97	2	4	150	360	501	5.78e-17	77.4
MS.gene61009.t1	AT4G04740	30.612	147	97	2	4	150	360	501	5.78e-17	77.4
MS.gene61009.t1	AT4G04740	30.612	147	97	2	4	150	360	501	5.78e-17	77.4
MS.gene61009.t1	AT4G04740	30.612	147	97	2	4	150	360	501	5.78e-17	77.4
MS.gene61009.t1	AT1G61950	30.464	151	96	3	10	158	397	540	2.47e-16	75.9
MS.gene61009.t1	AT4G21940	31.081	148	97	2	10	157	399	541	2.93e-16	75.5
MS.gene61009.t1	AT4G21940	31.081	148	97	2	10	157	399	541	2.98e-16	75.5
MS.gene61009.t1	AT5G23580	31.469	143	92	2	9	151	319	455	3.34e-16	75.1
MS.gene61009.t1	AT2G41410	30.405	148	99	3	16	161	69	214	3.40e-16	73.2
MS.gene61009.t1	AT2G41100	42.500	80	46	0	9	88	4	83	3.59e-16	71.6
MS.gene61009.t1	AT2G41100	48.529	68	35	0	93	160	12	79	1.67e-15	69.7
MS.gene61009.t1	AT2G31500	31.788	151	96	3	10	157	364	510	3.87e-16	75.1
MS.gene61009.t1	AT5G12180	31.690	142	92	2	10	151	371	507	4.99e-16	74.7
MS.gene61009.t1	AT4G04695	31.333	150	96	3	10	158	329	472	8.89e-16	73.9
MS.gene61009.t1	AT4G23650	33.333	144	87	3	10	151	376	512	9.25e-16	73.9
MS.gene61009.t1	AT1G76650	29.730	148	100	1	4	151	30	173	1.20e-15	70.9
MS.gene61009.t1	AT1G76650	29.730	148	100	1	4	151	30	173	1.20e-15	70.9
MS.gene61009.t1	AT3G20410	29.730	148	99	2	10	157	389	531	2.41e-15	72.8
MS.gene61009.t1	AT3G20410	29.730	148	99	2	10	157	389	531	2.41e-15	72.8
MS.gene61009.t1	AT1G50700	29.054	148	100	2	10	157	371	513	2.48e-15	72.8
MS.gene61009.t1	AT3G10660	30.986	142	92	2	10	151	484	619	2.76e-15	72.8
MS.gene61009.t1	AT3G10660	30.986	142	92	2	10	151	484	619	2.76e-15	72.8
MS.gene61009.t1	AT3G03410	29.545	132	81	1	19	150	4	123	2.91e-15	68.6
MS.gene61009.t1	AT5G04870	32.168	143	89	3	10	151	448	583	3.47e-15	72.4
MS.gene61009.t1	AT5G66210	30.323	155	99	3	10	161	362	510	2.68e-14	69.7
MS.gene61009.t1	AT5G66210	30.323	155	99	3	10	161	362	510	2.68e-14	69.7
MS.gene61009.t1	AT4G04710	30.769	143	90	3	10	150	343	478	2.97e-14	69.7
MS.gene61009.t1	AT4G04700	31.915	141	91	2	10	150	329	464	3.18e-14	69.7
MS.gene61009.t1	AT1G18890	26.950	141	99	1	10	150	361	497	3.83e-14	69.3
MS.gene61009.t1	AT3G51850	28.244	131	90	1	10	140	352	478	4.60e-14	68.9
MS.gene61009.t1	AT4G36070	30.719	153	97	4	10	159	371	517	1.20e-13	67.8
MS.gene61009.t1	AT4G04710	30.556	144	91	3	10	151	330	466	1.28e-13	67.8
MS.gene61009.t1	AT4G04710	30.556	144	91	3	10	151	316	452	1.30e-13	67.8
MS.gene61009.t1	AT4G36070	30.719	153	97	4	10	159	371	517	1.46e-13	67.8
MS.gene61009.t1	AT2G41860	27.027	148	104	1	10	157	352	495	4.01e-13	66.2
MS.gene61009.t1	AT1G76650	30.405	148	89	3	4	151	30	163	4.06e-13	63.9
MS.gene61009.t1	AT2G41860	27.027	148	104	1	10	157	352	495	4.21e-13	66.2
MS.gene61009.t1	AT5G44460	30.667	150	95	3	18	158	29	178	7.65e-13	63.5
MS.gene61009.t1	AT3G57530	29.139	151	98	4	10	158	361	504	1.17e-12	65.1
MS.gene61009.t1	AT4G04710	30.345	145	90	4	10	150	343	480	1.17e-12	65.1
MS.gene61009.t1	AT4G04740	28.467	137	93	2	4	140	360	491	3.23e-12	63.9
MS.gene61009.t1	AT4G20780	29.012	162	98	2	18	162	30	191	7.26e-12	61.2
MS.gene61009.t1	AT4G26470	24.375	160	104	2	12	155	53	211	1.18e-11	61.2
MS.gene61009.t1	AT5G61810	28.571	133	86	2	18	150	37	160	1.29e-11	62.0
MS.gene61009.t1	AT1G50700	25.862	174	98	3	10	157	371	539	1.48e-11	62.0
MS.gene61009.t1	AT4G26470	24.375	160	104	2	12	155	116	274	2.16e-11	60.8
MS.gene61009.t1	AT5G07320	27.338	139	92	1	12	150	32	161	2.52e-11	61.2
MS.gene61009.t1	AT5G12480	27.632	152	104	3	10	160	357	503	7.43e-11	59.7
MS.gene61009.t1	AT5G12480	27.632	152	104	3	10	160	263	409	7.85e-11	59.7

Find 47 sgRNAs with CRISPR-Local

Find 51 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGCTCATTCGATGGCGAAAT+TGG	0.173369	8.1:+37851377	MS.gene61009:CDS
AGTTTAGTTCTAACTGTGTT+AGG	0.285909	8.1:-37851131	None:intergenic
TCGGAAAATTTCGCGTAATT+CGG	0.348786	8.1:-37851082	None:intergenic
AGCAGCTACGGCAGCTGTTT+AGG	0.355154	8.1:+37851310	MS.gene61009:CDS
AATGATCAAGGAAGCTGATA+TGG	0.355861	8.1:+37851431	MS.gene61009:CDS
CTCGGAGTTTGTTGCGTTGG+TGG	0.393848	8.1:+37851248	MS.gene61009:CDS
ATCAGCTTCCTTGATCATTC+CGG	0.397768	8.1:-37851427	None:intergenic
TGTTTGATCGGGATGGGAAC+GGG	0.402665	8.1:+37851334	MS.gene61009:CDS
CCTTCTAACTGCTCCGCGCT+TGG	0.418843	8.1:-37851180	None:intergenic
AACTCCCTTCTCCGTTCGCT+TGG	0.424274	8.1:+37851150	MS.gene61009:CDS
GTTTAGTTCTAACTGTGTTA+GGG	0.435285	8.1:-37851130	None:intergenic
CCAAGCGCGGAGCAGTTAGA+AGG	0.441339	8.1:+37851180	MS.gene61009:CDS
CCGTAGCTGCTCCTCCGTGT+AGG	0.455735	8.1:-37851298	None:intergenic
CGTAGCTGCTCCTCCGTGTA+GGG	0.455738	8.1:-37851297	None:intergenic
GCTCATTCGATGGCGAAATT+GGG	0.456694	8.1:+37851378	MS.gene61009:CDS
GGTGGCGCCGGAGTTGTTGC+CGG	0.458089	8.1:+37851266	MS.gene61009:CDS
AGCTGTTTAGGATGTTTGAT+CGG	0.458136	8.1:+37851322	MS.gene61009:CDS
GTTTGTTGCGTTGGTGGCGC+CGG	0.461261	8.1:+37851254	MS.gene61009:CDS
GAAATTGGGACATGCTTTAA+CGG	0.463358	8.1:+37851392	MS.gene61009:CDS
GCTGTTTAGGATGTTTGATC+GGG	0.475869	8.1:+37851323	MS.gene61009:CDS
TAACGGATTGATAGAATTCT+CGG	0.480262	8.1:+37851230	MS.gene61009:CDS
GACTTTGCCGGCAACAACTC+CGG	0.488122	8.1:-37851273	None:intergenic
ATGTTTGATCGGGATGGGAA+CGG	0.488859	8.1:+37851333	MS.gene61009:CDS
TCCGTGTAGGGAGACTTTGC+CGG	0.497634	8.1:-37851285	None:intergenic
TTTAGGATGTTTGATCGGGA+TGG	0.512208	8.1:+37851327	MS.gene61009:CDS
TTAGGATGTTTGATCGGGAT+GGG	0.515191	8.1:+37851328	MS.gene61009:CDS
ATTCTCGGAGTTTGTTGCGT+TGG	0.516039	8.1:+37851245	MS.gene61009:CDS
GGAGTTGACCGGAATGATCA+AGG	0.528512	8.1:+37851419	MS.gene61009:CDS
GTTCGTCGTCTAATTTCACT+TGG	0.534691	8.1:-37851053	None:intergenic
TTAACGGCGGAGGAGTTGAC+CGG	0.536669	8.1:+37851408	MS.gene61009:CDS
TAAACCAAGCGAACGGAGAA+GGG	0.538024	8.1:-37851154	None:intergenic
TTAAACCAAGCGAACGGAGA+AGG	0.543878	8.1:-37851155	None:intergenic
GGGACATGCTTTAACGGCGG+AGG	0.548601	8.1:+37851398	MS.gene61009:CDS
CGAGCAGACACAAACAATAA+CGG	0.565297	8.1:+37851213	MS.gene61009:CDS
CGTTGTTTCGATCAAATGAT+CGG	0.580857	8.1:-37851101	None:intergenic
GGATGGGAACGGGTTTATCA+CGG	0.588947	8.1:+37851344	MS.gene61009:CDS
GAAGCTGATATGGATGGTGA+TGG	0.595234	8.1:+37851441	MS.gene61009:CDS
CCTACACGGAGGAGCAGCTA+CGG	0.598678	8.1:+37851298	MS.gene61009:CDS
GCCGGCAAAGTCTCCCTACA+CGG	0.611447	8.1:+37851284	MS.gene61009:CDS
AGCGGAGTTAGCTCATTCGA+TGG	0.618899	8.1:+37851368	MS.gene61009:CDS
AAGCTGATATGGATGGTGAT+GGG	0.620375	8.1:+37851442	MS.gene61009:CDS
GAACGGGTTTATCACGGCAG+CGG	0.638183	8.1:+37851350	MS.gene61009:CDS
ATTGGGACATGCTTTAACGG+CGG	0.651338	8.1:+37851395	MS.gene61009:CDS
GCTTGGTTTAAAACCAAGCG+CGG	0.668627	8.1:+37851167	MS.gene61009:CDS
ATCAAGGAAGCTGATATGGA+TGG	0.669937	8.1:+37851435	MS.gene61009:CDS
TCATTTGATCGAAACAACGA+CGG	0.715484	8.1:+37851105	MS.gene61009:CDS
GGCAAAGTCTCCCTACACGG+AGG	0.752958	8.1:+37851287	MS.gene61009:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AGTTTAGTTCTAACTGTGTT+AGG	-	chr8.1:37851134-37851153	None:intergenic	30.0%
!!	GTTTAGTTCTAACTGTGTTA+GGG	-	chr8.1:37851133-37851152	None:intergenic	30.0%
!!	TAACGGATTGATAGAATTCT+CGG	+	chr8.1:37851230-37851249	MS.gene61009:CDS	30.0%
!!!	TGCTGCTTTTGATAATTCTT+GGG	+	chr8.1:37851503-37851522	MS.gene61009:CDS	30.0%
	AATGATCAAGGAAGCTGATA+TGG	+	chr8.1:37851431-37851450	MS.gene61009:CDS	35.0%
	GAAATTGGGACATGCTTTAA+CGG	+	chr8.1:37851392-37851411	MS.gene61009:CDS	35.0%
	TCATTTGATCGAAACAACGA+CGG	+	chr8.1:37851105-37851124	MS.gene61009:CDS	35.0%
	TCGGAAAATTTCGCGTAATT+CGG	-	chr8.1:37851085-37851104	None:intergenic	35.0%
!	AGCTGTTTAGGATGTTTGAT+CGG	+	chr8.1:37851322-37851341	MS.gene61009:CDS	35.0%
!	CGTTGTTTCGATCAAATGAT+CGG	-	chr8.1:37851104-37851123	None:intergenic	35.0%
!!!	CTGCTGCTTTTGATAATTCT+TGG	+	chr8.1:37851502-37851521	MS.gene61009:CDS	35.0%
!!!	TTGGTTTTAAACCAAGCGAA+CGG	-	chr8.1:37851164-37851183	None:intergenic	35.0%
	AAGCTGATATGGATGGTGAT+GGG	+	chr8.1:37851442-37851461	MS.gene61009:CDS	40.0%
	ATCAAGGAAGCTGATATGGA+TGG	+	chr8.1:37851435-37851454	MS.gene61009:CDS	40.0%
	ATCAGCTTCCTTGATCATTC+CGG	-	chr8.1:37851430-37851449	None:intergenic	40.0%
	CGAGCAGACACAAACAATAA+CGG	+	chr8.1:37851213-37851232	MS.gene61009:CDS	40.0%
	GTTCGTCGTCTAATTTCACT+TGG	-	chr8.1:37851056-37851075	None:intergenic	40.0%
	TTAGGATGTTTGATCGGGAT+GGG	+	chr8.1:37851328-37851347	MS.gene61009:CDS	40.0%
!	GCTGTTTAGGATGTTTGATC+GGG	+	chr8.1:37851323-37851342	MS.gene61009:CDS	40.0%
!	TGATGGGATGATCAGTTTTC+AGG	+	chr8.1:37851458-37851477	MS.gene61009:CDS	40.0%
!	TTTAGGATGTTTGATCGGGA+TGG	+	chr8.1:37851327-37851346	MS.gene61009:CDS	40.0%
	AGCTCATTCGATGGCGAAAT+TGG	+	chr8.1:37851377-37851396	MS.gene61009:CDS	45.0%
	ATGTTTGATCGGGATGGGAA+CGG	+	chr8.1:37851333-37851352	MS.gene61009:CDS	45.0%
	ATTGGGACATGCTTTAACGG+CGG	+	chr8.1:37851395-37851414	MS.gene61009:CDS	45.0%
	GAAGCTGATATGGATGGTGA+TGG	+	chr8.1:37851441-37851460	MS.gene61009:CDS	45.0%
	GCTCATTCGATGGCGAAATT+GGG	+	chr8.1:37851378-37851397	MS.gene61009:CDS	45.0%
	TAAACCAAGCGAACGGAGAA+GGG	-	chr8.1:37851157-37851176	None:intergenic	45.0%
	TTAAACCAAGCGAACGGAGA+AGG	-	chr8.1:37851158-37851177	None:intergenic	45.0%
!	GCTTGGTTTAAAACCAAGCG+CGG	+	chr8.1:37851167-37851186	MS.gene61009:CDS	45.0%
!!	ATTCTCGGAGTTTGTTGCGT+TGG	+	chr8.1:37851245-37851264	MS.gene61009:CDS	45.0%
	AGCGGAGTTAGCTCATTCGA+TGG	+	chr8.1:37851368-37851387	MS.gene61009:CDS	50.0%
	GGAGTTGACCGGAATGATCA+AGG	+	chr8.1:37851419-37851438	MS.gene61009:CDS	50.0%
	TGTTTGATCGGGATGGGAAC+GGG	+	chr8.1:37851334-37851353	MS.gene61009:CDS	50.0%
!	GGATGGGAACGGGTTTATCA+CGG	+	chr8.1:37851344-37851363	MS.gene61009:CDS	50.0%
	AACTCCCTTCTCCGTTCGCT+TGG	+	chr8.1:37851150-37851169	MS.gene61009:CDS	55.0%
	AGCAGCTACGGCAGCTGTTT+AGG	+	chr8.1:37851310-37851329	MS.gene61009:CDS	55.0%
	GACTTTGCCGGCAACAACTC+CGG	-	chr8.1:37851276-37851295	None:intergenic	55.0%
	TCCGTGTAGGGAGACTTTGC+CGG	-	chr8.1:37851288-37851307	None:intergenic	55.0%
	TTAACGGCGGAGGAGTTGAC+CGG	+	chr8.1:37851408-37851427	MS.gene61009:CDS	55.0%
!	GAACGGGTTTATCACGGCAG+CGG	+	chr8.1:37851350-37851369	MS.gene61009:CDS	55.0%
!!	CTCGGAGTTTGTTGCGTTGG+TGG	+	chr8.1:37851248-37851267	MS.gene61009:CDS	55.0%
	CCAAGCGCGGAGCAGTTAGA+AGG	+	chr8.1:37851180-37851199	MS.gene61009:CDS	60.0%
	CCTACACGGAGGAGCAGCTA+CGG	+	chr8.1:37851298-37851317	MS.gene61009:CDS	60.0%
	CCTTCTAACTGCTCCGCGCT+TGG	-	chr8.1:37851183-37851202	None:intergenic	60.0%
	CGTAGCTGCTCCTCCGTGTA+GGG	-	chr8.1:37851300-37851319	None:intergenic	60.0%
	GCCGGCAAAGTCTCCCTACA+CGG	+	chr8.1:37851284-37851303	MS.gene61009:CDS	60.0%
	GGCAAAGTCTCCCTACACGG+AGG	+	chr8.1:37851287-37851306	MS.gene61009:CDS	60.0%
	GGGACATGCTTTAACGGCGG+AGG	+	chr8.1:37851398-37851417	MS.gene61009:CDS	60.0%
!!	GTTTGTTGCGTTGGTGGCGC+CGG	+	chr8.1:37851254-37851273	MS.gene61009:CDS	60.0%
	CCGTAGCTGCTCCTCCGTGT+AGG	-	chr8.1:37851301-37851320	None:intergenic	65.0%
!	GGTGGCGCCGGAGTTGTTGC+CGG	+	chr8.1:37851266-37851285	MS.gene61009:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	37851036	37851530	37851036	ID=MS.gene61009
chr8.1	mRNA	37851036	37851530	37851036	ID=MS.gene61009.t1;Parent=MS.gene61009
chr8.1	exon	37851036	37851530	37851036	ID=MS.gene61009.t1.exon1;Parent=MS.gene61009.t1
chr8.1	CDS	37851036	37851530	37851036	ID=cds.MS.gene61009.t1;Parent=MS.gene61009.t1

Gene Sequence

>MS.gene61009

ATGAACAAAAAGCAACACCAAGTGAAATTAGACGACGAACAAATCTCCGAATTACGCGAAATTTTCCGATCATTTGATCGAAACAACGACGGAACCCTAACACAGTTAGAACTAAACTCCCTTCTCCGTTCGCTTGGTTTAAAACCAAGCGCGGAGCAGTTAGAAGGATTCATACAACGAGCAGACACAAACAATAACGGATTGATAGAATTCTCGGAGTTTGTTGCGTTGGTGGCGCCGGAGTTGTTGCCGGCAAAGTCTCCCTACACGGAGGAGCAGCTACGGCAGCTGTTTAGGATGTTTGATCGGGATGGGAACGGGTTTATCACGGCAGCGGAGTTAGCTCATTCGATGGCGAAATTGGGACATGCTTTAACGGCGGAGGAGTTGACCGGAATGATCAAGGAAGCTGATATGGATGGTGATGGGATGATCAGTTTTCAGGAGTTTGCTCAAGCTATTACTTCTGCTGCTTTTGATAATTCTTGGGTTTAA

Protein sequence

>MS.gene61009.t1

MNKKQHQVKLDDEQISELREIFRSFDRNNDGTLTQLELNSLLRSLGLKPSAEQLEGFIQRADTNNNGLIEFSEFVALVAPELLPAKSPYTEEQLRQLFRMFDRDGNGFITAAELAHSMAKLGHALTAEELTGMIKEADMDGDGMISFQEFAQAITSAAFDNSWV