Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78047.t1 | XP_003605669.2 | 98.4 | 313 | 3 | 2 | 1 | 312 | 1 | 312 | 2.40E-150 | 541.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78047.t1 | Q9FKF4 | 84.2 | 278 | 37 | 2 | 35 | 312 | 37 | 307 | 8.0e-110 | 398.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78047.t1 | G7JRE7 | 98.4 | 313 | 3 | 2 | 1 | 312 | 1 | 312 | 1.8e-150 | 541.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene78047 | 0.821711 | 3.49E-53 | -1.69E-46 |
| MS.gene049232 | MS.gene78047 | 0.806256 | 8.98E-50 | -1.69E-46 |
| MS.gene049396 | MS.gene78047 | 0.832464 | 9.31E-56 | -1.69E-46 |
| MS.gene049609 | MS.gene78047 | 0.835946 | 1.25E-56 | -1.69E-46 |
| MS.gene049794 | MS.gene78047 | 0.804605 | 1.99E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene78047 | 0.804322 | 2.28E-49 | -1.69E-46 |
| MS.gene050122 | MS.gene78047 | 0.806034 | 1.00E-49 | -1.69E-46 |
| MS.gene050170 | MS.gene78047 | 0.814109 | 1.82E-51 | -1.69E-46 |
| MS.gene050593 | MS.gene78047 | 0.828681 | 7.86E-55 | -1.69E-46 |
| MS.gene050670 | MS.gene78047 | 0.838663 | 2.52E-57 | -1.69E-46 |
| MS.gene050747 | MS.gene78047 | 0.864802 | 9.35E-65 | -1.69E-46 |
| MS.gene050772 | MS.gene78047 | 0.81763 | 2.98E-52 | -1.69E-46 |
| MS.gene05080 | MS.gene78047 | 0.818532 | 1.87E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene78047 | 0.825888 | 3.67E-54 | -1.69E-46 |
| MS.gene050871 | MS.gene78047 | 0.828689 | 7.82E-55 | -1.69E-46 |
| MS.gene050950 | MS.gene78047 | 0.850055 | 2.17E-60 | -1.69E-46 |
| MS.gene051167 | MS.gene78047 | -0.800114 | 1.68E-48 | -1.69E-46 |
| MS.gene051387 | MS.gene78047 | 0.844423 | 7.63E-59 | -1.69E-46 |
| MS.gene051438 | MS.gene78047 | 0.83591 | 1.27E-56 | -1.69E-46 |
| MS.gene051525 | MS.gene78047 | 0.803702 | 3.07E-49 | -1.69E-46 |
| MS.gene051588 | MS.gene78047 | 0.807633 | 4.59E-50 | -1.69E-46 |
| MS.gene051694 | MS.gene78047 | 0.800928 | 1.15E-48 | -1.69E-46 |
| MS.gene051838 | MS.gene78047 | 0.84524 | 4.59E-59 | -1.69E-46 |
| MS.gene051874 | MS.gene78047 | 0.824706 | 6.98E-54 | -1.69E-46 |
| MS.gene052164 | MS.gene78047 | 0.833499 | 5.15E-56 | -1.69E-46 |
| MS.gene052346 | MS.gene78047 | 0.824697 | 7.01E-54 | -1.69E-46 |
| MS.gene052414 | MS.gene78047 | 0.808403 | 3.15E-50 | -1.69E-46 |
| MS.gene052421 | MS.gene78047 | 0.83013 | 3.49E-55 | -1.69E-46 |
| MS.gene052501 | MS.gene78047 | 0.827414 | 1.59E-54 | -1.69E-46 |
| MS.gene052503 | MS.gene78047 | 0.839903 | 1.20E-57 | -1.69E-46 |
| MS.gene052505 | MS.gene78047 | 0.827844 | 1.25E-54 | -1.69E-46 |
| MS.gene052506 | MS.gene78047 | 0.800084 | 1.70E-48 | -1.69E-46 |
| MS.gene052823 | MS.gene78047 | 0.84145 | 4.72E-58 | -1.69E-46 |
| MS.gene052825 | MS.gene78047 | 0.838943 | 2.13E-57 | -1.69E-46 |
| MS.gene052966 | MS.gene78047 | 0.814833 | 1.26E-51 | -1.69E-46 |
| MS.gene052982 | MS.gene78047 | 0.825379 | 4.84E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene78047 | 0.840631 | 7.74E-58 | -1.69E-46 |
| MS.gene053207 | MS.gene78047 | 0.81136 | 7.28E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene78047 | 0.804494 | 2.10E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene78047 | 0.803228 | 3.85E-49 | -1.69E-46 |
| MS.gene053318 | MS.gene78047 | 0.842422 | 2.61E-58 | -1.69E-46 |
| MS.gene053436 | MS.gene78047 | 0.843211 | 1.61E-58 | -1.69E-46 |
| MS.gene053479 | MS.gene78047 | 0.810401 | 1.17E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene78047 | 0.860124 | 2.57E-63 | -1.69E-46 |
| MS.gene053626 | MS.gene78047 | 0.881445 | 2.39E-70 | -1.69E-46 |
| MS.gene053632 | MS.gene78047 | 0.803764 | 2.98E-49 | -1.69E-46 |
| MS.gene05381 | MS.gene78047 | 0.808743 | 2.67E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene78047 | 0.820779 | 5.73E-53 | -1.69E-46 |
| MS.gene05383 | MS.gene78047 | 0.830997 | 2.14E-55 | -1.69E-46 |
| MS.gene053912 | MS.gene78047 | 0.828246 | 1.00E-54 | -1.69E-46 |
| MS.gene054003 | MS.gene78047 | 0.847402 | 1.18E-59 | -1.69E-46 |
| MS.gene054595 | MS.gene78047 | 0.827481 | 1.53E-54 | -1.69E-46 |
| MS.gene054927 | MS.gene78047 | 0.855105 | 7.89E-62 | -1.69E-46 |
| MS.gene05494 | MS.gene78047 | 0.809682 | 1.68E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene78047 | 0.829564 | 4.80E-55 | -1.69E-46 |
| MS.gene055224 | MS.gene78047 | 0.806782 | 6.96E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene78047 | 0.816546 | 5.23E-52 | -1.69E-46 |
| MS.gene055629 | MS.gene78047 | 0.809163 | 2.17E-50 | -1.69E-46 |
| MS.gene055722 | MS.gene78047 | 0.810893 | 9.19E-51 | -1.69E-46 |
| MS.gene055741 | MS.gene78047 | 0.825229 | 5.25E-54 | -1.69E-46 |
| MS.gene055744 | MS.gene78047 | 0.820102 | 8.19E-53 | -1.69E-46 |
| MS.gene055909 | MS.gene78047 | 0.846282 | 2.40E-59 | -1.69E-46 |
| MS.gene055911 | MS.gene78047 | 0.842667 | 2.25E-58 | -1.69E-46 |
| MS.gene055941 | MS.gene78047 | 0.823954 | 1.05E-53 | -1.69E-46 |
| MS.gene05601 | MS.gene78047 | 0.83774 | 4.35E-57 | -1.69E-46 |
| MS.gene056040 | MS.gene78047 | 0.858869 | 6.13E-63 | -1.69E-46 |
| MS.gene056166 | MS.gene78047 | 0.861398 | 1.06E-63 | -1.69E-46 |
| MS.gene056422 | MS.gene78047 | 0.811675 | 6.22E-51 | -1.69E-46 |
| MS.gene056448 | MS.gene78047 | 0.824032 | 1.01E-53 | -1.69E-46 |
| MS.gene056511 | MS.gene78047 | 0.828475 | 8.81E-55 | -1.69E-46 |
| MS.gene056514 | MS.gene78047 | 0.819777 | 9.72E-53 | -1.69E-46 |
| MS.gene05664 | MS.gene78047 | 0.82202 | 2.96E-53 | -1.69E-46 |
| MS.gene05666 | MS.gene78047 | 0.841478 | 4.64E-58 | -1.69E-46 |
| MS.gene057019 | MS.gene78047 | 0.801312 | 9.56E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene78047 | 0.808592 | 2.87E-50 | -1.69E-46 |
| MS.gene057086 | MS.gene78047 | 0.810912 | 9.10E-51 | -1.69E-46 |
| MS.gene057289 | MS.gene78047 | 0.813021 | 3.16E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene78047 | 0.815957 | 7.08E-52 | -1.69E-46 |
| MS.gene057658 | MS.gene78047 | 0.80062 | 1.32E-48 | -1.69E-46 |
| MS.gene057734 | MS.gene78047 | 0.874687 | 5.56E-68 | -1.69E-46 |
| MS.gene057856 | MS.gene78047 | 0.834452 | 2.97E-56 | -1.69E-46 |
| MS.gene05787 | MS.gene78047 | 0.848713 | 5.14E-60 | -1.69E-46 |
| MS.gene058120 | MS.gene78047 | 0.836967 | 6.86E-57 | -1.69E-46 |
| MS.gene058130 | MS.gene78047 | 0.806175 | 9.35E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene78047 | 0.829464 | 5.07E-55 | -1.69E-46 |
| MS.gene05837 | MS.gene78047 | 0.832072 | 1.16E-55 | -1.69E-46 |
| MS.gene058700 | MS.gene78047 | 0.857704 | 1.36E-62 | -1.69E-46 |
| MS.gene058838 | MS.gene78047 | 0.801455 | 8.93E-49 | -1.69E-46 |
| MS.gene058948 | MS.gene78047 | 0.838073 | 3.57E-57 | -1.69E-46 |
| MS.gene059023 | MS.gene78047 | 0.802029 | 6.81E-49 | -1.69E-46 |
| MS.gene059367 | MS.gene78047 | 0.82314 | 1.63E-53 | -1.69E-46 |
| MS.gene059368 | MS.gene78047 | 0.817636 | 2.98E-52 | -1.69E-46 |
| MS.gene059517 | MS.gene78047 | 0.82073 | 5.88E-53 | -1.69E-46 |
| MS.gene059667 | MS.gene78047 | 0.834092 | 3.66E-56 | -1.69E-46 |
| MS.gene059680 | MS.gene78047 | 0.805646 | 1.21E-49 | -1.69E-46 |
| MS.gene059711 | MS.gene78047 | 0.800598 | 1.34E-48 | -1.69E-46 |
| MS.gene059718 | MS.gene78047 | 0.825745 | 3.96E-54 | -1.69E-46 |
| MS.gene06000 | MS.gene78047 | 0.815018 | 1.15E-51 | -1.69E-46 |
| MS.gene060372 | MS.gene78047 | 0.85733 | 1.76E-62 | -1.69E-46 |
| MS.gene060482 | MS.gene78047 | 0.817175 | 3.78E-52 | -1.69E-46 |
| MS.gene060778 | MS.gene78047 | 0.816685 | 4.87E-52 | -1.69E-46 |
| MS.gene060835 | MS.gene78047 | 0.814297 | 1.66E-51 | -1.69E-46 |
| MS.gene060837 | MS.gene78047 | 0.851485 | 8.61E-61 | -1.69E-46 |
| MS.gene06092 | MS.gene78047 | 0.813561 | 2.40E-51 | -1.69E-46 |
| MS.gene06097 | MS.gene78047 | 0.833075 | 6.57E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene034845 | MS.gene78047 | PPI |
| MS.gene056897 | MS.gene78047 | PPI |
| MS.gene78047 | MS.gene81766 | PPI |
| MS.gene065735 | MS.gene78047 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78047.t1 | MTR_4g035650 | 98.403 | 313 | 3 | 2 | 1 | 312 | 1 | 312 | 0.0 | 629 |
| MS.gene78047.t1 | MTR_4g035650 | 97.444 | 313 | 4 | 3 | 1 | 312 | 1 | 310 | 0.0 | 618 |
| MS.gene78047.t1 | MTR_1g059670 | 61.409 | 298 | 101 | 4 | 18 | 312 | 19 | 305 | 1.67e-118 | 343 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78047.t1 | AT5G61670 | 84.532 | 278 | 36 | 1 | 35 | 312 | 37 | 307 | 1.32e-171 | 478 |
| MS.gene78047.t1 | AT5G61670 | 84.532 | 278 | 36 | 1 | 35 | 312 | 37 | 307 | 1.32e-171 | 478 |
| MS.gene78047.t1 | AT5G06130 | 63.309 | 278 | 97 | 2 | 40 | 312 | 38 | 315 | 4.90e-124 | 358 |
| MS.gene78047.t1 | AT5G06130 | 67.532 | 231 | 74 | 1 | 83 | 312 | 1 | 231 | 1.92e-114 | 330 |
Find 58 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAAATCTTGAACAGTTTC+AGG | 0.165120 | 4.1:+65263672 | None:intergenic |
| GGAATGAATGATGGGAAATT+AGG | 0.261986 | 4.1:+65262196 | None:intergenic |
| CATTCCATTCTTGCCTCCTT+TGG | 0.293420 | 4.1:-65262179 | MS.gene78047:intron |
| AATGGAACTTCAAGAAATTC+AGG | 0.311738 | 4.1:-65263646 | MS.gene78047:CDS |
| TGGTGTAATCTCTGCATTAA+TGG | 0.340651 | 4.1:-65260914 | MS.gene78047:CDS |
| ATTTAGATGAATGAATCTTT+TGG | 0.346573 | 4.1:+65263921 | None:intergenic |
| AAGAAATTCAGGATAATATT+CGG | 0.347874 | 4.1:-65263635 | MS.gene78047:CDS |
| TTCGCTTGCCATAGCCATTC+CGG | 0.349664 | 4.1:+65259714 | None:intergenic |
| CCTATTGTGGCATCATTCTC+TGG | 0.350969 | 4.1:-65260946 | MS.gene78047:CDS |
| AAAGAAGAAGATGTTGTGTT+TGG | 0.384172 | 4.1:-65263986 | None:intergenic |
| TGTTCAAATTGCTCCGGATC+TGG | 0.412046 | 4.1:-65260462 | MS.gene78047:CDS |
| CTTACCAAAGGAGGCAAGAA+TGG | 0.419900 | 4.1:+65262175 | None:intergenic |
| ATGTTGTGTTTGGGTGTAGT+TGG | 0.439515 | 4.1:-65263976 | MS.gene78047:CDS |
| CCAGAGAATGATGCCACAAT+AGG | 0.441935 | 4.1:+65260946 | None:intergenic |
| TCATTCTCTGGTGGAGCTGT+TGG | 0.444757 | 4.1:-65260934 | MS.gene78047:CDS |
| TGCAAATACTGTCTTGGTAC+TGG | 0.456169 | 4.1:-65260850 | MS.gene78047:intron |
| AGGCTGATCTCCACCATTGA+AGG | 0.461185 | 4.1:+65260509 | None:intergenic |
| CTGGAGCTTAAGCTTGGAAT+AGG | 0.466047 | 4.1:-65261268 | MS.gene78047:CDS |
| ATGTCCAACCTTGCCAGATC+CGG | 0.468622 | 4.1:+65260449 | None:intergenic |
| TTGTGTTTGGGTGTAGTTGG+TGG | 0.471210 | 4.1:-65263973 | MS.gene78047:CDS |
| GGCAAGAATGGAATGAATGA+TGG | 0.471565 | 4.1:+65262187 | None:intergenic |
| GATAAACAATGTAAAACAAC+AGG | 0.476410 | 4.1:-65260884 | MS.gene78047:CDS |
| TCTCAGCTGGAGCTTAAGCT+TGG | 0.484713 | 4.1:-65261274 | MS.gene78047:intron |
| AAGAAGAAGATGTTGTGTTT+GGG | 0.485406 | 4.1:-65263985 | None:intergenic |
| AGGAGGATACCGGTTCAATC+AGG | 0.490296 | 4.1:+65260529 | None:intergenic |
| TGCAGACTTCAGCAAACCTC+CGG | 0.495333 | 4.1:-65262064 | MS.gene78047:intron |
| GGAGCAATTTGAACATCTCT+CGG | 0.515917 | 4.1:+65260470 | None:intergenic |
| AAAAGATGCAAATACTGTCT+TGG | 0.520613 | 4.1:-65260856 | MS.gene78047:CDS |
| ATATTAAACATCTAATCAAA+AGG | 0.525443 | 4.1:+65259673 | None:intergenic |
| CAATAAGAGGTGGCGTGTCA+TGG | 0.530836 | 4.1:-65263881 | MS.gene78047:CDS |
| TCTTTGCACCGGAATGGCTA+TGG | 0.534453 | 4.1:-65259722 | MS.gene78047:CDS |
| TGTGTTTGGGTGTAGTTGGT+GGG | 0.535913 | 4.1:-65263972 | MS.gene78047:CDS |
| CCACCATTGAAGGAGGATAC+CGG | 0.540857 | 4.1:+65260519 | None:intergenic |
| AGCACTTGTCCTGATTGAAC+CGG | 0.540917 | 4.1:-65260538 | MS.gene78047:CDS |
| GAACCGGTATCCTCCTTCAA+TGG | 0.546734 | 4.1:-65260522 | MS.gene78047:CDS |
| AACAGGTTGCATAATACTGC+CGG | 0.551192 | 4.1:+65262045 | None:intergenic |
| GAGAGATGTTCAAATTGCTC+CGG | 0.560664 | 4.1:-65260468 | MS.gene78047:CDS |
| AACATGTCTTTGCACCGGAA+TGG | 0.564128 | 4.1:-65259728 | MS.gene78047:CDS |
| GCAAGAATGGAATGAATGAT+GGG | 0.568641 | 4.1:+65262188 | None:intergenic |
| TGCATCTGCCTATGCAGTTG+AGG | 0.569061 | 4.1:-65261213 | MS.gene78047:intron |
| AAATTGCTCCGGATCTGGCA+AGG | 0.573161 | 4.1:-65260457 | MS.gene78047:intron |
| TAGTCAGGTTGATCCTATTG+TGG | 0.580018 | 4.1:-65260959 | MS.gene78047:CDS |
| TAATCAAAAGGATCAATTCG+CGG | 0.580042 | 4.1:+65259685 | None:intergenic |
| ATTGTGGCATCATTCTCTGG+TGG | 0.587254 | 4.1:-65260943 | MS.gene78047:CDS |
| ATTCCGGTGCAAAGACATGT+TGG | 0.592847 | 4.1:+65259730 | None:intergenic |
| AGGATAATATTCGGAGTCGA+AGG | 0.596991 | 4.1:-65263626 | MS.gene78047:CDS |
| CCGGTATCCTCCTTCAATGG+TGG | 0.599228 | 4.1:-65260519 | MS.gene78047:CDS |
| TGTCCAACATGTCTTTGCAC+CGG | 0.600830 | 4.1:-65259733 | MS.gene78047:CDS |
| TAAATCTTACACTCGGAGCA+AGG | 0.601691 | 4.1:+65261985 | None:intergenic |
| GAGCTTAAGCTTGGAATAGG+TGG | 0.603781 | 4.1:-65261265 | MS.gene78047:CDS |
| GGACGCTACCTCAACTGCAT+AGG | 0.605455 | 4.1:+65261205 | None:intergenic |
| GTTTAGTTGAAGACATGTTG+TGG | 0.621480 | 4.1:+65263948 | None:intergenic |
| CTGATCTCCACCATTGAAGG+AGG | 0.622262 | 4.1:+65260512 | None:intergenic |
| AAAACAGTTTCAATAAGAGG+TGG | 0.630936 | 4.1:-65263891 | MS.gene78047:CDS |
| GTCATGAAACTTACCAAAGG+AGG | 0.633941 | 4.1:+65262166 | None:intergenic |
| TGTGCTCGATGTTCAAACAC+GGG | 0.651986 | 4.1:-65260561 | MS.gene78047:CDS |
| ATGTGCTCGATGTTCAAACA+CGG | 0.661742 | 4.1:-65260562 | MS.gene78047:CDS |
| AGGTTGCATAATACTGCCGG+AGG | 0.679756 | 4.1:+65262048 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATGAATTTAATATTGAA+TGG | - | chr4.1:65260462-65260481 | MS.gene78047:CDS | 10.0% |
| !! | ATAAAAAACTATGAAAAAAA+TGG | + | chr4.1:65263657-65263676 | None:intergenic | 10.0% |
| !!! | TGATAATATTTTTATTGATA+AGG | - | chr4.1:65262198-65262217 | MS.gene78047:CDS | 10.0% |
| !! | AAAAAAATATTGAAGATGAA+GGG | - | chr4.1:65260507-65260526 | MS.gene78047:CDS | 15.0% |
| !! | AATTATGGTTTACAATTTAA+TGG | - | chr4.1:65263568-65263587 | MS.gene78047:intron | 15.0% |
| !! | AGAAATGAATAAAAGAATTA+TGG | - | chr4.1:65263553-65263572 | MS.gene78047:intron | 15.0% |
| !! | AGTATTACTTATCTATATTA+TGG | + | chr4.1:65263294-65263313 | None:intergenic | 15.0% |
| !! | ATTATGGTTTACAATTTAAT+GGG | - | chr4.1:65263569-65263588 | MS.gene78047:intron | 15.0% |
| !! | TAAAAAAATATTGAAGATGA+AGG | - | chr4.1:65260506-65260525 | MS.gene78047:CDS | 15.0% |
| !! | TGAACTTTAAATTAAGTTAA+AGG | + | chr4.1:65263365-65263384 | None:intergenic | 15.0% |
| !! | TGATTATATACACAATTATA+CGG | + | chr4.1:65261004-65261023 | None:intergenic | 15.0% |
| !!! | AAAAAACTCATTTTTAAAAC+AGG | + | chr4.1:65259928-65259947 | None:intergenic | 15.0% |
| !!! | ATTTATACATTTTACTCTAT+GGG | - | chr4.1:65261321-65261340 | MS.gene78047:intron | 15.0% |
| !!! | GAATAAGATTTTTTTACATA+TGG | - | chr4.1:65260056-65260075 | MS.gene78047:intron | 15.0% |
| !! | AAGAAATTCAGGATAATATT+CGG | - | chr4.1:65260025-65260044 | MS.gene78047:intron | 20.0% |
| !! | AGGTGTATTTCATAAAAATA+GGG | + | chr4.1:65259905-65259924 | None:intergenic | 20.0% |
| !! | ATGTATACATAAAATTGAGA+TGG | - | chr4.1:65261189-65261208 | MS.gene78047:intron | 20.0% |
| !! | ATTACTTATCTATATTATGG+CGG | + | chr4.1:65263291-65263310 | None:intergenic | 20.0% |
| !! | ATTTAATATTGAATGGACAA+TGG | - | chr4.1:65260469-65260488 | MS.gene78047:CDS | 20.0% |
| !! | CATAGAGTAAAATGTATAAA+TGG | + | chr4.1:65261322-65261341 | None:intergenic | 20.0% |
| !! | TAATGAAGTAGAATATGAAA+TGG | + | chr4.1:65261767-65261786 | None:intergenic | 20.0% |
| !! | TACAATATAGATTATTACGA+CGG | + | chr4.1:65261887-65261906 | None:intergenic | 20.0% |
| !! | TTCATATTCTACTTCATTAA+TGG | - | chr4.1:65261768-65261787 | MS.gene78047:intron | 20.0% |
| !!! | ATATACTCTTGTTATTTTGT+AGG | - | chr4.1:65261364-65261383 | MS.gene78047:intron | 20.0% |
| !!! | ATTTAGATGAATGAATCTTT+TGG | + | chr4.1:65259742-65259761 | None:intergenic | 20.0% |
| !!! | ATTTTCGTTTTGAAAGATAA+AGG | + | chr4.1:65263422-65263441 | None:intergenic | 20.0% |
| !!! | CAGTTTGATTTTATTACTTA+TGG | - | chr4.1:65261155-65261174 | MS.gene78047:intron | 20.0% |
| !!! | CATTTATACATTTTACTCTA+TGG | - | chr4.1:65261320-65261339 | MS.gene78047:intron | 20.0% |
| !!! | TAAAATTGAGATGGATTTTT+TGG | - | chr4.1:65261198-65261217 | MS.gene78047:intron | 20.0% |
| !!! | TATTTTTATTGATAAGGCTT+AGG | - | chr4.1:65262204-65262223 | MS.gene78047:CDS | 20.0% |
| !!! | TGACATTTCTATTATACTTT+TGG | - | chr4.1:65263057-65263076 | MS.gene78047:intron | 20.0% |
| ! | AAATTAAGTTAAAGGACTTC+TGG | + | chr4.1:65263357-65263376 | None:intergenic | 25.0% |
| ! | AAGATATAGACGATTAATCT+AGG | + | chr4.1:65263818-65263837 | None:intergenic | 25.0% |
| ! | AATTGTGTATATAATCACAC+TGG | - | chr4.1:65261007-65261026 | MS.gene78047:intron | 25.0% |
| ! | ACAATATAGATTATTACGAC+GGG | + | chr4.1:65261886-65261905 | None:intergenic | 25.0% |
| ! | AGAAAAACAGTTTCAATAAG+AGG | - | chr4.1:65259766-65259785 | MS.gene78047:intron | 25.0% |
| ! | AGAATTAAAAATGCTGAACT+TGG | - | chr4.1:65261410-65261429 | MS.gene78047:intron | 25.0% |
| ! | AGTTACAATTATCATCATCA+AGG | + | chr4.1:65263748-65263767 | None:intergenic | 25.0% |
| ! | CAACATAATTTCGTTACTAT+TGG | + | chr4.1:65262674-65262693 | None:intergenic | 25.0% |
| ! | CAATAGTAACGAAATTATGT+TGG | - | chr4.1:65262672-65262691 | MS.gene78047:intron | 25.0% |
| ! | CATCATTATTGTTCTTTCAT+CGG | + | chr4.1:65260372-65260391 | None:intergenic | 25.0% |
| ! | CGTAATAATCTATATTGTAG+CGG | - | chr4.1:65261888-65261907 | MS.gene78047:intron | 25.0% |
| ! | CTAAAGATCTCTACTATATA+AGG | + | chr4.1:65260788-65260807 | None:intergenic | 25.0% |
| ! | GAGGTGTATTTCATAAAAAT+AGG | + | chr4.1:65259906-65259925 | None:intergenic | 25.0% |
| ! | GATAAACAATGTAAAACAAC+AGG | - | chr4.1:65262776-65262795 | MS.gene78047:intron | 25.0% |
| ! | GGTGTATTTCATAAAAATAG+GGG | + | chr4.1:65259904-65259923 | None:intergenic | 25.0% |
| ! | GTAAAAGTAAATCTTACACT+CGG | + | chr4.1:65261685-65261704 | None:intergenic | 25.0% |
| ! | GTAACAATTTGCATTAAGAA+AGG | + | chr4.1:65262927-65262946 | None:intergenic | 25.0% |
| ! | GTTACAATTATCATCATCAA+GGG | + | chr4.1:65263747-65263766 | None:intergenic | 25.0% |
| ! | TTAGGAATCAAATTTCTGAA+TGG | - | chr4.1:65262867-65262886 | MS.gene78047:intron | 25.0% |
| ! | TTAGGTTAAGCAAATATTAC+TGG | + | chr4.1:65262148-65262167 | None:intergenic | 25.0% |
| ! | TTCATTTCTACTAGCTAAAA+TGG | + | chr4.1:65263542-65263561 | None:intergenic | 25.0% |
| !! | ATTAGTGGGATAATACTTTT+TGG | - | chr4.1:65261646-65261665 | MS.gene78047:intron | 25.0% |
| !! | ATTGCCCTTTTATGAAATTT+TGG | - | chr4.1:65263484-65263503 | MS.gene78047:intron | 25.0% |
| !! | CTTTTTATATCCATCTTTTG+TGG | - | chr4.1:65262323-65262342 | MS.gene78047:intron | 25.0% |
| !! | TGGTAATTTGAATTTTCAAC+AGG | + | chr4.1:65261302-65261321 | None:intergenic | 25.0% |
| !! | TGTTCAAGATTTTGCTAAAA+TGG | - | chr4.1:65259996-65260015 | MS.gene78047:intron | 25.0% |
| !! | TTATTGTAATTTTTGTCTCG+TGG | + | chr4.1:65262030-65262049 | None:intergenic | 25.0% |
| !! | TTGCAATCACTAACATATTT+TGG | + | chr4.1:65260326-65260345 | None:intergenic | 25.0% |
| !!! | AAACTCATTTTTAAAACAGG+AGG | + | chr4.1:65259925-65259944 | None:intergenic | 25.0% |
| !!! | GATTTTTTTACATATGGAAG+AGG | - | chr4.1:65260062-65260081 | MS.gene78047:intron | 25.0% |
| !!! | TTTTTTATTGTTTTGAACGC+AGG | - | chr4.1:65259947-65259966 | MS.gene78047:intron | 25.0% |
| AAAACAGTTTCAATAAGAGG+TGG | - | chr4.1:65259769-65259788 | MS.gene78047:intron | 30.0% | |
| AAAAGATGCAAATACTGTCT+TGG | - | chr4.1:65262804-65262823 | MS.gene78047:intron | 30.0% | |
| AACAGACTTTACTTACCTTT+CGG | - | chr4.1:65260235-65260254 | MS.gene78047:intron | 30.0% | |
| AAGCCGAAAATTATTCTCTA+CGG | - | chr4.1:65262576-65262595 | MS.gene78047:intron | 30.0% | |
| AATATTGAATGGACAATGGT+TGG | - | chr4.1:65260473-65260492 | MS.gene78047:CDS | 30.0% | |
| AATGGAACTTCAAGAAATTC+AGG | - | chr4.1:65260014-65260033 | MS.gene78047:intron | 30.0% | |
| ACTCTCCTTAACTATATTCT+TGG | - | chr4.1:65262172-65262191 | MS.gene78047:intron | 30.0% | |
| ATTGAAAATGCCACAAAAGA+TGG | + | chr4.1:65262336-65262355 | None:intergenic | 30.0% | |
| CAGGTTCTTTGTATTAAACA+TGG | + | chr4.1:65261283-65261302 | None:intergenic | 30.0% | |
| CATTGCCAAGAATATAGTTA+AGG | + | chr4.1:65262180-65262199 | None:intergenic | 30.0% | |
| GGCACCAAAATTTCATAAAA+GGG | + | chr4.1:65263491-65263510 | None:intergenic | 30.0% | |
| GTATCTTCACTTCAGAATTA+TGG | + | chr4.1:65263607-65263626 | None:intergenic | 30.0% | |
| TAAGACTTCAAAAACCACTT+CGG | - | chr4.1:65262833-65262852 | MS.gene78047:intron | 30.0% | |
| TAATCAAAAGGATCAATTCG+CGG | + | chr4.1:65263978-65263997 | None:intergenic | 30.0% | |
| TAGACATAGACTAATTAGCT+TGG | - | chr4.1:65263789-65263808 | MS.gene78047:intron | 30.0% | |
| TAGGATGTACAGCAAATTAA+TGG | - | chr4.1:65262223-65262242 | MS.gene78047:CDS | 30.0% | |
| TAGTCTATGTCTAGATAACA+TGG | + | chr4.1:65263782-65263801 | None:intergenic | 30.0% | |
| TGGCACCAAAATTTCATAAA+AGG | + | chr4.1:65263492-65263511 | None:intergenic | 30.0% | |
| TTATGTTGGAAATTGTAGTC+AGG | - | chr4.1:65262686-65262705 | MS.gene78047:intron | 30.0% | |
| ! | AGATCTTTAGAAGAATTGGA+GGG | - | chr4.1:65260798-65260817 | MS.gene78047:intron | 30.0% |
| ! | ATACATTTTACTCTATGGGA+TGG | - | chr4.1:65261325-65261344 | MS.gene78047:intron | 30.0% |
| ! | CATAAAAGGGCAATTTTTCA+CGG | + | chr4.1:65263478-65263497 | None:intergenic | 30.0% |
| ! | GATGATATGATGATGATTCT+CGG | - | chr4.1:65260888-65260907 | MS.gene78047:CDS | 30.0% |
| ! | GTAGAGATCTTTAGAAGAAT+TGG | - | chr4.1:65260794-65260813 | MS.gene78047:intron | 30.0% |
| ! | TCGAACTTGTGTTATCATTT+TGG | + | chr4.1:65260193-65260212 | None:intergenic | 30.0% |
| !! | ACCTGTTTTTCTCTTATTAG+TGG | - | chr4.1:65261631-65261650 | MS.gene78047:intron | 30.0% |
| !! | CCTGTTTTTCTCTTATTAGT+GGG | - | chr4.1:65261632-65261651 | MS.gene78047:intron | 30.0% |
| !! | GTTTTTCATAGCTTGTATGT+AGG | - | chr4.1:65260408-65260427 | MS.gene78047:intron | 30.0% |
| !!! | TATTATACTTTTGGCTTGTC+AGG | - | chr4.1:65263066-65263085 | MS.gene78047:intron | 30.0% |
| !!! | TTGTTATTTTGTAGGTTCGA+AGG | - | chr4.1:65261372-65261391 | MS.gene78047:intron | 30.0% |
| AAAGAAGTCAATAGTTGCTC+CGG | + | chr4.1:65260981-65261000 | None:intergenic | 35.0% | |
| AAGATGCCAATGATCTAAAG+TGG | - | chr4.1:65260585-65260604 | MS.gene78047:intron | 35.0% | |
| ACAGACTTTACTTACCTTTC+GGG | - | chr4.1:65260236-65260255 | MS.gene78047:intron | 35.0% | |
| ACTGATAAAAACTCTGCTAC+TGG | - | chr4.1:65259861-65259880 | MS.gene78047:intron | 35.0% | |
| AGATCAGTGTTGTCAAATAG+CGG | - | chr4.1:65261860-65261879 | MS.gene78047:intron | 35.0% | |
| AGATCATTGGCATCTTATGT+GGG | + | chr4.1:65260581-65260600 | None:intergenic | 35.0% | |
| AGCCGAAAATTATTCTCTAC+GGG | - | chr4.1:65262577-65262596 | MS.gene78047:intron | 35.0% | |
| AGGTGACAATAATCAGGAAA+TGG | + | chr4.1:65262479-65262498 | None:intergenic | 35.0% | |
| ATAATCACACTGGTGGTTTA+TGG | - | chr4.1:65261017-65261036 | MS.gene78047:intron | 35.0% | |
| ATGATGTTTCACATGAGATC+TGG | - | chr4.1:65260386-65260405 | MS.gene78047:intron | 35.0% | |
| ATTATTGCTACAAACCCAGA+AGG | + | chr4.1:65263847-65263866 | None:intergenic | 35.0% | |
| CAAGTTCCACTTTAGATCAT+TGG | + | chr4.1:65260594-65260613 | None:intergenic | 35.0% | |
| CATGAGATTCCAATCCAAAT+GGG | - | chr4.1:65260943-65260962 | MS.gene78047:CDS | 35.0% | |
| CCCACTAATAAGAGAAAAAC+AGG | + | chr4.1:65261635-65261654 | None:intergenic | 35.0% | |
| CTAAAGTGGAACTTGAATGA+TGG | - | chr4.1:65260599-65260618 | MS.gene78047:intron | 35.0% | |
| CTGATAAAAACTCTGCTACT+GGG | - | chr4.1:65259862-65259881 | MS.gene78047:intron | 35.0% | |
| GAATTGTTCAATGTTTGAGC+AGG | - | chr4.1:65262072-65262091 | MS.gene78047:intron | 35.0% | |
| GATAACACAAGTTCGATTCT+TGG | - | chr4.1:65260197-65260216 | MS.gene78047:intron | 35.0% | |
| GCAAAATCTTGAACAGTTTC+AGG | + | chr4.1:65259991-65260010 | None:intergenic | 35.0% | |
| GCAAGAATGGAATGAATGAT+GGG | + | chr4.1:65261475-65261494 | None:intergenic | 35.0% | |
| GGAAAAACTCCGAATTACTA+GGG | - | chr4.1:65260257-65260276 | MS.gene78047:intron | 35.0% | |
| GGAATCAAATTTCTGAATGG+TGG | - | chr4.1:65262870-65262889 | MS.gene78047:intron | 35.0% | |
| GTAAACAGGTGACAATAATC+AGG | + | chr4.1:65262485-65262504 | None:intergenic | 35.0% | |
| GTGTCAAATAGAGGCTATAT+CGG | - | chr4.1:65261926-65261945 | MS.gene78047:intron | 35.0% | |
| GTGTTGTCAATCATGAATAG+TGG | + | chr4.1:65261988-65262007 | None:intergenic | 35.0% | |
| GTTTAGTTGAAGACATGTTG+TGG | + | chr4.1:65259715-65259734 | None:intergenic | 35.0% | |
| TAATCACACTGGTGGTTTAT+GGG | - | chr4.1:65261018-65261037 | MS.gene78047:intron | 35.0% | |
| TACTTGTCTAATTTCTCAGC+TGG | - | chr4.1:65262373-65262392 | MS.gene78047:intron | 35.0% | |
| TAGATCATTGGCATCTTATG+TGG | + | chr4.1:65260582-65260601 | None:intergenic | 35.0% | |
| TATATCTTCGCATACCTTCT+GGG | - | chr4.1:65263830-65263849 | MS.gene78047:CDS | 35.0% | |
| TCAATTCTTGCCTTGATAAG+TGG | - | chr4.1:65260849-65260868 | MS.gene78047:intron | 35.0% | |
| TCAGTCATGAAACTTACCAA+AGG | + | chr4.1:65261500-65261519 | None:intergenic | 35.0% | |
| TCTGCGAAGAATAAGTAAAC+AGG | + | chr4.1:65262499-65262518 | None:intergenic | 35.0% | |
| TGATACTGAATTCCAATTGC+AGG | - | chr4.1:65263899-65263918 | MS.gene78047:CDS | 35.0% | |
| TGGTGTAATCTCTGCATTAA+TGG | - | chr4.1:65262746-65262765 | MS.gene78047:intron | 35.0% | |
| TGTGTATATAATCACACTGG+TGG | - | chr4.1:65261010-65261029 | MS.gene78047:intron | 35.0% | |
| TGTTTACTTATTCTTCGCAG+AGG | - | chr4.1:65262498-65262517 | MS.gene78047:intron | 35.0% | |
| TTACTGCTTTCAACTGTTGA+GGG | - | chr4.1:65262943-65262962 | MS.gene78047:intron | 35.0% | |
| TTTGGACTGAAGATCACTAA+AGG | + | chr4.1:65263454-65263473 | None:intergenic | 35.0% | |
| ! | AATTTGAAGTGCTTGGCAAA+TGG | - | chr4.1:65261552-65261571 | MS.gene78047:intron | 35.0% |
| ! | AGTAGCAGAGTTTTTATCAG+TGG | + | chr4.1:65259862-65259881 | None:intergenic | 35.0% |
| ! | ATATGATGATGATTCTCGGA+GGG | - | chr4.1:65260892-65260911 | MS.gene78047:CDS | 35.0% |
| ! | GAGATCTTTAGAAGAATTGG+AGG | - | chr4.1:65260797-65260816 | MS.gene78047:intron | 35.0% |
| ! | GGAATGAATGATGGGAAATT+AGG | + | chr4.1:65261467-65261486 | None:intergenic | 35.0% |
| ! | GTTTTTATCAGTGGTATCAG+AGG | + | chr4.1:65259853-65259872 | None:intergenic | 35.0% |
| ! | TGCCCGTAGAGAATAATTTT+CGG | + | chr4.1:65262582-65262601 | None:intergenic | 35.0% |
| ! | TGCTTTCAATTTGAAGTGCT+TGG | - | chr4.1:65261545-65261564 | MS.gene78047:intron | 35.0% |
| ! | TGTTAACTCTCTAGTTCCTA+GGG | + | chr4.1:65260290-65260309 | None:intergenic | 35.0% |
| ! | TTAAGATCACTGTTGCTTGT+AGG | - | chr4.1:65261076-65261095 | MS.gene78047:intron | 35.0% |
| ! | TTTGAACATCTCTCGGTTTT+TGG | + | chr4.1:65263186-65263205 | None:intergenic | 35.0% |
| ! | TTTGAGGTAGCATGATCAAA+AGG | + | chr4.1:65262280-65262299 | None:intergenic | 35.0% |
| !! | AACAAATCGGTGTCAAATAG+AGG | - | chr4.1:65261917-65261936 | MS.gene78047:intron | 35.0% |
| !! | AGTGGGATAATACTTTTTGG+TGG | - | chr4.1:65261649-65261668 | MS.gene78047:intron | 35.0% |
| !! | CGCAGGTTTTGTATTATAGA+AGG | - | chr4.1:65259964-65259983 | MS.gene78047:intron | 35.0% |
| !! | GTACAATGTAGTGCTTTTTG+AGG | + | chr4.1:65262296-65262315 | None:intergenic | 35.0% |
| !! | TGGCCAATCCTTTTACTTTT+GGG | - | chr4.1:65262115-65262134 | MS.gene78047:intron | 35.0% |
| !!! | ATGAAATTTTGGTGCCATGT+TGG | - | chr4.1:65263495-65263514 | MS.gene78047:intron | 35.0% |
| !!! | TAGTTAAGGAGAGTGCTTTT+AGG | + | chr4.1:65262166-65262185 | None:intergenic | 35.0% |
| AACACTAGAGAAGAGAGAGA+GGG | - | chr4.1:65262003-65262022 | MS.gene78047:CDS | 40.0% | |
| AACAGGTTGCATAATACTGC+CGG | + | chr4.1:65261618-65261637 | None:intergenic | 40.0% | |
| AACTGTAGAACACTTTCTCG+CGG | + | chr4.1:65261140-65261159 | None:intergenic | 40.0% | |
| ACACAAGTTCGATTCTTGGA+TGG | - | chr4.1:65260201-65260220 | MS.gene78047:intron | 40.0% | |
| ACTAACACTTGGGTACAGTT+TGG | - | chr4.1:65263705-65263724 | MS.gene78047:intron | 40.0% | |
| ACTGTACCCAAGTGTTAGTA+AGG | + | chr4.1:65263704-65263723 | None:intergenic | 40.0% | |
| AGACGACAATCCACTTATCA+AGG | + | chr4.1:65260862-65260881 | None:intergenic | 40.0% | |
| AGGATAATATTCGGAGTCGA+AGG | - | chr4.1:65260034-65260053 | MS.gene78047:intron | 40.0% | |
| AGTGGAACTTGAATGATGGT+TGG | - | chr4.1:65260603-65260622 | MS.gene78047:intron | 40.0% | |
| ATGTGCTCGATGTTCAAACA+CGG | - | chr4.1:65263098-65263117 | MS.gene78047:intron | 40.0% | |
| ATGTTGTGTTTGGGTGTAGT+TGG | - | chr4.1:65259684-65259703 | MS.gene78047:CDS | 40.0% | |
| CTATATCTTCGCATACCTTC+TGG | - | chr4.1:65263829-65263848 | MS.gene78047:CDS | 40.0% | |
| CTCAAGTCGGTAGAAGATTT+AGG | - | chr4.1:65260700-65260719 | MS.gene78047:intron | 40.0% | |
| CTTATGTGGGAAACTTTCCT+CGG | + | chr4.1:65260568-65260587 | None:intergenic | 40.0% | |
| CTTCCAAAATAAGGCCAACA+TGG | + | chr4.1:65263512-65263531 | None:intergenic | 40.0% | |
| GAAGATGAAGGGATGATTAG+TGG | - | chr4.1:65260518-65260537 | MS.gene78047:CDS | 40.0% | |
| GAGAGATGTTCAAATTGCTC+CGG | - | chr4.1:65263192-65263211 | MS.gene78047:intron | 40.0% | |
| GCACCCAAAAGTAAAAGGAT+TGG | + | chr4.1:65262121-65262140 | None:intergenic | 40.0% | |
| GCATGAGATTCCAATCCAAA+TGG | - | chr4.1:65260942-65260961 | MS.gene78047:CDS | 40.0% | |
| GCTTGTATGTAGGAAGATGA+AGG | - | chr4.1:65260418-65260437 | MS.gene78047:intron | 40.0% | |
| GGAGCAATTTGAACATCTCT+CGG | + | chr4.1:65263193-65263212 | None:intergenic | 40.0% | |
| GGCAAGAATGGAATGAATGA+TGG | + | chr4.1:65261476-65261495 | None:intergenic | 40.0% | |
| GGGAAAAACTCCGAATTACT+AGG | - | chr4.1:65260256-65260275 | MS.gene78047:intron | 40.0% | |
| GTAGAAGATTTAGGTGAGTG+AGG | - | chr4.1:65260709-65260728 | MS.gene78047:intron | 40.0% | |
| GTCATGAAACTTACCAAAGG+AGG | + | chr4.1:65261497-65261516 | None:intergenic | 40.0% | |
| GTTACTGCTTTCAACTGTTG+AGG | - | chr4.1:65262942-65262961 | MS.gene78047:intron | 40.0% | |
| TAAAATGCAGATCTCCGAAG+TGG | + | chr4.1:65262850-65262869 | None:intergenic | 40.0% | |
| TAAATCTTACACTCGGAGCA+AGG | + | chr4.1:65261678-65261697 | None:intergenic | 40.0% | |
| TACTGCTTTCAACTGTTGAG+GGG | - | chr4.1:65262944-65262963 | MS.gene78047:intron | 40.0% | |
| TAGCATTCTGATGCTCAAGT+CGG | - | chr4.1:65260687-65260706 | MS.gene78047:intron | 40.0% | |
| TCTCTACGGGCATATTCTAT+TGG | - | chr4.1:65262590-65262609 | MS.gene78047:intron | 40.0% | |
| TGCAAATACTGTCTTGGTAC+TGG | - | chr4.1:65262810-65262829 | MS.gene78047:intron | 40.0% | |
| TTGCACCAGTACAAAAGAGT+CGG | + | chr4.1:65261736-65261755 | None:intergenic | 40.0% | |
| ! | AATTCGGAGTTTTTCCCGAA+AGG | + | chr4.1:65260253-65260272 | None:intergenic | 40.0% |
| ! | ACTTCGGAGATCTGCATTTT+AGG | - | chr4.1:65262849-65262868 | MS.gene78047:intron | 40.0% |
| ! | AGGGCAATTTTTCACGGTTT+TGG | + | chr4.1:65263472-65263491 | None:intergenic | 40.0% |
| ! | ATGGTGGAACTGAAGCATTA+TGG | - | chr4.1:65262886-65262905 | MS.gene78047:intron | 40.0% |
| ! | CTGGCCAATCCTTTTACTTT+TGG | - | chr4.1:65262114-65262133 | MS.gene78047:intron | 40.0% |
| ! | GATATGATGATGATTCTCGG+AGG | - | chr4.1:65260891-65260910 | MS.gene78047:CDS | 40.0% |
| ! | GGCATCGAACTTCCAAAATA+AGG | + | chr4.1:65263521-65263540 | None:intergenic | 40.0% |
| ! | GTAGCGGAATTCGAACAAAT+CGG | - | chr4.1:65261904-65261923 | MS.gene78047:intron | 40.0% |
| ! | GTGTTAACTCTCTAGTTCCT+AGG | + | chr4.1:65260291-65260310 | None:intergenic | 40.0% |
| ! | GTTAACTCTCTAGTTCCTAG+GGG | + | chr4.1:65260289-65260308 | None:intergenic | 40.0% |
| ! | TGAATCCGACTCTTTTGTAC+TGG | - | chr4.1:65261728-65261747 | MS.gene78047:intron | 40.0% |
| !! | TAGTCAGGTTGATCCTATTG+TGG | - | chr4.1:65262701-65262720 | MS.gene78047:intron | 40.0% |
| !! | TGAATGATGGTTGGTGATGA+TGG | - | chr4.1:65260612-65260631 | MS.gene78047:intron | 40.0% |
| !! | TGCTATAGCACTGATGAGTA+GGG | - | chr4.1:65261949-65261968 | MS.gene78047:intron | 40.0% |
| !! | TTGGTGATGATGGAACATAG+TGG | - | chr4.1:65260622-65260641 | MS.gene78047:intron | 40.0% |
| !!! | TCGGTTTTTGGTGGTGATAA+AGG | + | chr4.1:65263174-65263193 | None:intergenic | 40.0% |
| AAAGAGTCGGATTCACATCG+AGG | + | chr4.1:65261723-65261742 | None:intergenic | 45.0% | |
| AACATGTCTTTGCACCGGAA+TGG | - | chr4.1:65263932-65263951 | MS.gene78047:CDS | 45.0% | |
| ACCTCTGCCTTACTAACACT+TGG | - | chr4.1:65263694-65263713 | MS.gene78047:CDS | 45.0% | |
| AGCACTTGTCCTGATTGAAC+CGG | - | chr4.1:65263122-65263141 | MS.gene78047:intron | 45.0% | |
| ATGATTAGTGGCAAGGGAAG+TGG | - | chr4.1:65260530-65260549 | MS.gene78047:CDS | 45.0% | |
| ATTCCAATCCAAATGGGCCT+TGG | - | chr4.1:65260949-65260968 | MS.gene78047:CDS | 45.0% | |
| ATTCCGGTGCAAAGACATGT+TGG | + | chr4.1:65263933-65263952 | None:intergenic | 45.0% | |
| ATTGTGGCATCATTCTCTGG+TGG | - | chr4.1:65262717-65262736 | MS.gene78047:intron | 45.0% | |
| CAACACTAGAGAAGAGAGAG+AGG | - | chr4.1:65262002-65262021 | MS.gene78047:CDS | 45.0% | |
| CATTCCATTCTTGCCTCCTT+TGG | - | chr4.1:65261481-65261500 | MS.gene78047:intron | 45.0% | |
| CCAGAGAATGATGCCACAAT+AGG | + | chr4.1:65262717-65262736 | None:intergenic | 45.0% | |
| CCAGCAACAGCAATAGCATA+GGG | + | chr4.1:65262098-65262117 | None:intergenic | 45.0% | |
| CCTATTGTGGCATCATTCTC+TGG | - | chr4.1:65262714-65262733 | MS.gene78047:intron | 45.0% | |
| CCTCTGCCTTACTAACACTT+GGG | - | chr4.1:65263695-65263714 | MS.gene78047:intron | 45.0% | |
| CTGGAGCTTAAGCTTGGAAT+AGG | - | chr4.1:65262392-65262411 | MS.gene78047:intron | 45.0% | |
| CTTACCAAAGGAGGCAAGAA+TGG | + | chr4.1:65261488-65261507 | None:intergenic | 45.0% | |
| GAAGGGATGATTAGTGGCAA+GGG | - | chr4.1:65260524-65260543 | MS.gene78047:CDS | 45.0% | |
| GAGCTTAAGCTTGGAATAGG+TGG | - | chr4.1:65262395-65262414 | MS.gene78047:intron | 45.0% | |
| GCAACGCACCCAAAAGTAAA+AGG | + | chr4.1:65262126-65262145 | None:intergenic | 45.0% | |
| TGAAGGGATGATTAGTGGCA+AGG | - | chr4.1:65260523-65260542 | MS.gene78047:CDS | 45.0% | |
| TGGCGTCAGATTATCACTGT+TGG | - | chr4.1:65262610-65262629 | MS.gene78047:intron | 45.0% | |
| TGTCCAACATGTCTTTGCAC+CGG | - | chr4.1:65263927-65263946 | MS.gene78047:CDS | 45.0% | |
| TGTGCTCGATGTTCAAACAC+GGG | - | chr4.1:65263099-65263118 | MS.gene78047:intron | 45.0% | |
| TGTGTTTGGGTGTAGTTGGT+GGG | - | chr4.1:65259688-65259707 | MS.gene78047:CDS | 45.0% | |
| TGTTCAAATTGCTCCGGATC+TGG | - | chr4.1:65263198-65263217 | MS.gene78047:intron | 45.0% | |
| TTCAACTGTTGAGGGGAAGA+TGG | - | chr4.1:65262951-65262970 | MS.gene78047:intron | 45.0% | |
| TTGAGCATCAGAATGCTAGC+AGG | + | chr4.1:65260685-65260704 | None:intergenic | 45.0% | |
| TTGGACACATGACCTGCAAT+TGG | + | chr4.1:65263914-65263933 | None:intergenic | 45.0% | |
| TTGTGTTTGGGTGTAGTTGG+TGG | - | chr4.1:65259687-65259706 | MS.gene78047:CDS | 45.0% | |
| ! | ATGATGGAACATAGTGGAGG+AGG | - | chr4.1:65260628-65260647 | MS.gene78047:intron | 45.0% |
| !! | GAACATCTCTCGGTTTTTGG+TGG | + | chr4.1:65263183-65263202 | None:intergenic | 45.0% |
| !! | GCTATAGCACTGATGAGTAG+GGG | - | chr4.1:65261950-65261969 | MS.gene78047:intron | 45.0% |
| !! | GGGAAGTGTCCCTAGTAATT+CGG | + | chr4.1:65260269-65260288 | None:intergenic | 45.0% |
| !! | GTGATGATGGAACATAGTGG+AGG | - | chr4.1:65260625-65260644 | MS.gene78047:intron | 45.0% |
| !! | GTGCTATAGCACTGATGAGT+AGG | - | chr4.1:65261948-65261967 | MS.gene78047:intron | 45.0% |
| !!! | GTGCCATGTTGGCCTTATTT+TGG | - | chr4.1:65263506-65263525 | MS.gene78047:intron | 45.0% |
| !! | AAAAATTAAATTTAAAAAAG+TGG | - | chr4.1:65263631-65263650 | MS.gene78047:CDS | 5.0% |
| AAATTGCTCCGGATCTGGCA+AGG | - | chr4.1:65263203-65263222 | MS.gene78047:intron | 50.0% | |
| AGGCTGATCTCCACCATTGA+AGG | + | chr4.1:65263154-65263173 | None:intergenic | 50.0% | |
| AGGTTGCATAATACTGCCGG+AGG | + | chr4.1:65261615-65261634 | None:intergenic | 50.0% | |
| AGTGGAAACTCCTTTGACCG+AGG | - | chr4.1:65260548-65260567 | MS.gene78047:CDS | 50.0% | |
| ATGTCCAACCTTGCCAGATC+CGG | + | chr4.1:65263214-65263233 | None:intergenic | 50.0% | |
| CAATAAGAGGTGGCGTGTCA+TGG | - | chr4.1:65259779-65259798 | MS.gene78047:intron | 50.0% | |
| CCACCATTGAAGGAGGATAC+CGG | + | chr4.1:65263144-65263163 | None:intergenic | 50.0% | |
| CCCAAGTGTTAGTAAGGCAG+AGG | + | chr4.1:65263698-65263717 | None:intergenic | 50.0% | |
| CTGATCTCCACCATTGAAGG+AGG | + | chr4.1:65263151-65263170 | None:intergenic | 50.0% | |
| GAACCGGTATCCTCCTTCAA+TGG | - | chr4.1:65263138-65263157 | MS.gene78047:intron | 50.0% | |
| GATGTGTACCTTGCTCCTGA+GGG | - | chr4.1:65260750-65260769 | MS.gene78047:intron | 50.0% | |
| GCCAGCAACAGCAATAGCAT+AGG | + | chr4.1:65262099-65262118 | None:intergenic | 50.0% | |
| GCGTCTTCTCACGTACTCAA+TGG | + | chr4.1:65260829-65260848 | None:intergenic | 50.0% | |
| GGAGGTTGACGATTGATCTC+TGG | - | chr4.1:65260646-65260665 | MS.gene78047:intron | 50.0% | |
| GGGAAACTTTCCTCGGTCAA+AGG | + | chr4.1:65260561-65260580 | None:intergenic | 50.0% | |
| GGTTGACGATTGATCTCTGG+CGG | - | chr4.1:65260649-65260668 | MS.gene78047:intron | 50.0% | |
| GTTGACGATTGATCTCTGGC+GGG | - | chr4.1:65260650-65260669 | MS.gene78047:intron | 50.0% | |
| TCAAGGGAACAATGCTGACG+TGG | + | chr4.1:65263731-65263750 | None:intergenic | 50.0% | |
| TCATTCTCTGGTGGAGCTGT+TGG | - | chr4.1:65262726-65262745 | MS.gene78047:intron | 50.0% | |
| TCTCAGCTGGAGCTTAAGCT+TGG | - | chr4.1:65262386-65262405 | MS.gene78047:intron | 50.0% | |
| TCTTTGCACCGGAATGGCTA+TGG | - | chr4.1:65263938-65263957 | MS.gene78047:CDS | 50.0% | |
| TGATGTGTACCTTGCTCCTG+AGG | - | chr4.1:65260749-65260768 | MS.gene78047:intron | 50.0% | |
| TGCAGACTTCAGCAAACCTC+CGG | - | chr4.1:65261596-65261615 | MS.gene78047:intron | 50.0% | |
| TGCATCTGCCTATGCAGTTG+AGG | - | chr4.1:65262447-65262466 | MS.gene78047:intron | 50.0% | |
| TTACTAGGGACACTTCCCCT+AGG | - | chr4.1:65260271-65260290 | MS.gene78047:intron | 50.0% | |
| TTCGCTTGCCATAGCCATTC+CGG | + | chr4.1:65263949-65263968 | None:intergenic | 50.0% | |
| TTGACGATTGATCTCTGGCG+GGG | - | chr4.1:65260651-65260670 | MS.gene78047:intron | 50.0% | |
| ! | CCCTATGCTATTGCTGTTGC+TGG | - | chr4.1:65262095-65262114 | MS.gene78047:intron | 50.0% |
| !! | AGGAGGATACCGGTTCAATC+AGG | + | chr4.1:65263134-65263153 | None:intergenic | 50.0% |
| AAATGGGCCTTGGCTCAGTC+CGG | - | chr4.1:65260959-65260978 | MS.gene78047:CDS | 55.0% | |
| CCGGTATCCTCCTTCAATGG+TGG | - | chr4.1:65263141-65263160 | MS.gene78047:intron | 55.0% | |
| GAGCCAAGGCCCATTTGGAT+TGG | + | chr4.1:65260955-65260974 | None:intergenic | 55.0% | |
| GGACGCTACCTCAACTGCAT+AGG | + | chr4.1:65262458-65262477 | None:intergenic | 55.0% | |
| ACCTTGCTCCTGAGGGAGTG+AGG | - | chr4.1:65260757-65260776 | MS.gene78047:intron | 60.0% | |
| AGTTGCTCCGGACTGAGCCA+AGG | + | chr4.1:65260969-65260988 | None:intergenic | 60.0% | |
| CCTTGCTCCTGAGGGAGTGA+GGG | - | chr4.1:65260758-65260777 | MS.gene78047:intron | 60.0% | |
| CGATTGATCTCTGGCGGGGA+TGG | - | chr4.1:65260655-65260674 | MS.gene78047:intron | 60.0% | |
| GGACTGAGCCAAGGCCCATT+TGG | + | chr4.1:65260960-65260979 | None:intergenic | 60.0% | |
| TGCTCCGGATCTGGCAAGGT+TGG | - | chr4.1:65263207-65263226 | MS.gene78047:intron | 60.0% | |
| AGGACCTCCCTCACTCCCTC+AGG | + | chr4.1:65260768-65260787 | None:intergenic | 65.0% | |
| CCCTCACTCCCTCAGGAGCA+AGG | + | chr4.1:65260761-65260780 | None:intergenic | 65.0% | |
| TGCTCCTGAGGGAGTGAGGG+AGG | - | chr4.1:65260761-65260780 | MS.gene78047:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 65259684 | 65263998 | 65259684 | ID=MS.gene78047 |
| chr4.1 | mRNA | 65259684 | 65263998 | 65259684 | ID=MS.gene78047.t1;Parent=MS.gene78047 |
| chr4.1 | exon | 65263799 | 65263998 | 65263799 | ID=MS.gene78047.t1.exon1;Parent=MS.gene78047.t1 |
| chr4.1 | CDS | 65263799 | 65263998 | 65263799 | ID=cds.MS.gene78047.t1;Parent=MS.gene78047.t1 |
| chr4.1 | exon | 65263599 | 65263713 | 65263599 | ID=MS.gene78047.t1.exon2;Parent=MS.gene78047.t1 |
| chr4.1 | CDS | 65263599 | 65263713 | 65263599 | ID=cds.MS.gene78047.t1;Parent=MS.gene78047.t1 |
| chr4.1 | exon | 65262180 | 65262296 | 65262180 | ID=MS.gene78047.t1.exon3;Parent=MS.gene78047.t1 |
| chr4.1 | CDS | 65262180 | 65262296 | 65262180 | ID=cds.MS.gene78047.t1;Parent=MS.gene78047.t1 |
| chr4.1 | exon | 65261995 | 65262081 | 65261995 | ID=MS.gene78047.t1.exon4;Parent=MS.gene78047.t1 |
| chr4.1 | CDS | 65261995 | 65262081 | 65261995 | ID=cds.MS.gene78047.t1;Parent=MS.gene78047.t1 |
| chr4.1 | exon | 65261214 | 65261290 | 65261214 | ID=MS.gene78047.t1.exon5;Parent=MS.gene78047.t1 |
| chr4.1 | CDS | 65261214 | 65261290 | 65261214 | ID=cds.MS.gene78047.t1;Parent=MS.gene78047.t1 |
| chr4.1 | exon | 65260851 | 65260978 | 65260851 | ID=MS.gene78047.t1.exon6;Parent=MS.gene78047.t1 |
| chr4.1 | CDS | 65260851 | 65260978 | 65260851 | ID=cds.MS.gene78047.t1;Parent=MS.gene78047.t1 |
| chr4.1 | exon | 65260458 | 65260594 | 65260458 | ID=MS.gene78047.t1.exon7;Parent=MS.gene78047.t1 |
| chr4.1 | CDS | 65260458 | 65260594 | 65260458 | ID=cds.MS.gene78047.t1;Parent=MS.gene78047.t1 |
| chr4.1 | exon | 65259684 | 65259761 | 65259684 | ID=MS.gene78047.t1.exon8;Parent=MS.gene78047.t1 |
| chr4.1 | CDS | 65259684 | 65259761 | 65259684 | ID=cds.MS.gene78047.t1;Parent=MS.gene78047.t1 |
| Gene Sequence |
| Protein sequence |
