Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79806.t1 | AFK34697.1 | 96.9 | 192 | 6 | 0 | 1 | 192 | 1 | 192 | 3.40E-86 | 327.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79806.t1 | Q9C7F7 | 56.4 | 110 | 48 | 0 | 28 | 137 | 31 | 140 | 4.1e-32 | 139.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79806.t1 | I3S355 | 96.9 | 192 | 6 | 0 | 1 | 192 | 1 | 192 | 2.4e-86 | 327.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene79806 | 0.802238 | 6.17E-49 | -1.69E-46 |
| MS.gene049351 | MS.gene79806 | 0.829655 | 4.56E-55 | -1.69E-46 |
| MS.gene049389 | MS.gene79806 | 0.823409 | 1.41E-53 | -1.69E-46 |
| MS.gene049491 | MS.gene79806 | 0.839924 | 1.18E-57 | -1.69E-46 |
| MS.gene049614 | MS.gene79806 | 0.824421 | 8.15E-54 | -1.69E-46 |
| MS.gene049661 | MS.gene79806 | 0.806166 | 9.39E-50 | -1.69E-46 |
| MS.gene049662 | MS.gene79806 | 0.801478 | 8.84E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene79806 | 0.846337 | 2.31E-59 | -1.69E-46 |
| MS.gene049907 | MS.gene79806 | 0.836997 | 6.74E-57 | -1.69E-46 |
| MS.gene050076 | MS.gene79806 | 0.827885 | 1.22E-54 | -1.69E-46 |
| MS.gene050099 | MS.gene79806 | 0.841103 | 5.82E-58 | -1.69E-46 |
| MS.gene050128 | MS.gene79806 | 0.853829 | 1.84E-61 | -1.69E-46 |
| MS.gene050301 | MS.gene79806 | 0.854015 | 1.63E-61 | -1.69E-46 |
| MS.gene050432 | MS.gene79806 | 0.851564 | 8.18E-61 | -1.69E-46 |
| MS.gene050520 | MS.gene79806 | 0.802218 | 6.23E-49 | -1.69E-46 |
| MS.gene050581 | MS.gene79806 | 0.844585 | 6.90E-59 | -1.69E-46 |
| MS.gene050767 | MS.gene79806 | 0.882897 | 7.08E-71 | -1.69E-46 |
| MS.gene050770 | MS.gene79806 | 0.885121 | 1.07E-71 | -1.69E-46 |
| MS.gene05101 | MS.gene79806 | 0.868949 | 4.46E-66 | -1.69E-46 |
| MS.gene05105 | MS.gene79806 | 0.800647 | 1.31E-48 | -1.69E-46 |
| MS.gene051228 | MS.gene79806 | 0.801084 | 1.06E-48 | -1.69E-46 |
| MS.gene051255 | MS.gene79806 | 0.833841 | 4.23E-56 | -1.69E-46 |
| MS.gene051471 | MS.gene79806 | 0.831256 | 1.85E-55 | -1.69E-46 |
| MS.gene051877 | MS.gene79806 | 0.81191 | 5.53E-51 | -1.69E-46 |
| MS.gene052078 | MS.gene79806 | 0.867626 | 1.19E-65 | -1.69E-46 |
| MS.gene052178 | MS.gene79806 | 0.856785 | 2.54E-62 | -1.69E-46 |
| MS.gene052188 | MS.gene79806 | 0.832156 | 1.11E-55 | -1.69E-46 |
| MS.gene052207 | MS.gene79806 | 0.812827 | 3.49E-51 | -1.69E-46 |
| MS.gene052271 | MS.gene79806 | 0.829646 | 4.58E-55 | -1.69E-46 |
| MS.gene052287 | MS.gene79806 | 0.849618 | 2.88E-60 | -1.69E-46 |
| MS.gene052290 | MS.gene79806 | 0.839277 | 1.74E-57 | -1.69E-46 |
| MS.gene052293 | MS.gene79806 | 0.805083 | 1.58E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene79806 | 0.833419 | 5.39E-56 | -1.69E-46 |
| MS.gene052322 | MS.gene79806 | 0.801721 | 7.88E-49 | -1.69E-46 |
| MS.gene052326 | MS.gene79806 | 0.843287 | 1.54E-58 | -1.69E-46 |
| MS.gene052340 | MS.gene79806 | 0.823967 | 1.04E-53 | -1.69E-46 |
| MS.gene052485 | MS.gene79806 | 0.812289 | 4.57E-51 | -1.69E-46 |
| MS.gene053009 | MS.gene79806 | 0.846481 | 2.11E-59 | -1.69E-46 |
| MS.gene053209 | MS.gene79806 | 0.862907 | 3.63E-64 | -1.69E-46 |
| MS.gene053322 | MS.gene79806 | 0.825134 | 5.53E-54 | -1.69E-46 |
| MS.gene053813 | MS.gene79806 | 0.852164 | 5.52E-61 | -1.69E-46 |
| MS.gene053836 | MS.gene79806 | 0.807821 | 4.19E-50 | -1.69E-46 |
| MS.gene054010 | MS.gene79806 | 0.809928 | 1.48E-50 | -1.69E-46 |
| MS.gene054011 | MS.gene79806 | 0.806578 | 7.68E-50 | -1.69E-46 |
| MS.gene054013 | MS.gene79806 | 0.801171 | 1.02E-48 | -1.69E-46 |
| MS.gene054123 | MS.gene79806 | 0.820185 | 7.84E-53 | -1.69E-46 |
| MS.gene054376 | MS.gene79806 | 0.885641 | 6.82E-72 | -1.69E-46 |
| MS.gene05455 | MS.gene79806 | 0.816948 | 4.25E-52 | -1.69E-46 |
| MS.gene054802 | MS.gene79806 | 0.835429 | 1.69E-56 | -1.69E-46 |
| MS.gene054803 | MS.gene79806 | 0.836998 | 6.74E-57 | -1.69E-46 |
| MS.gene054804 | MS.gene79806 | 0.83981 | 1.27E-57 | -1.69E-46 |
| MS.gene055116 | MS.gene79806 | 0.804416 | 2.18E-49 | -1.69E-46 |
| MS.gene055254 | MS.gene79806 | 0.862374 | 5.30E-64 | -1.69E-46 |
| MS.gene055277 | MS.gene79806 | 0.869496 | 2.97E-66 | -1.69E-46 |
| MS.gene055390 | MS.gene79806 | 0.853849 | 1.82E-61 | -1.69E-46 |
| MS.gene055397 | MS.gene79806 | 0.826739 | 2.30E-54 | -1.69E-46 |
| MS.gene055422 | MS.gene79806 | 0.857291 | 1.80E-62 | -1.69E-46 |
| MS.gene055428 | MS.gene79806 | 0.832709 | 8.10E-56 | -1.69E-46 |
| MS.gene055499 | MS.gene79806 | 0.816572 | 5.16E-52 | -1.69E-46 |
| MS.gene055604 | MS.gene79806 | 0.818208 | 2.21E-52 | -1.69E-46 |
| MS.gene055647 | MS.gene79806 | 0.82111 | 4.81E-53 | -1.69E-46 |
| MS.gene05592 | MS.gene79806 | 0.837512 | 4.98E-57 | -1.69E-46 |
| MS.gene056191 | MS.gene79806 | 0.837468 | 5.11E-57 | -1.69E-46 |
| MS.gene056407 | MS.gene79806 | 0.818725 | 1.69E-52 | -1.69E-46 |
| MS.gene056410 | MS.gene79806 | 0.873533 | 1.37E-67 | -1.69E-46 |
| MS.gene056609 | MS.gene79806 | 0.840406 | 8.87E-58 | -1.69E-46 |
| MS.gene056611 | MS.gene79806 | 0.817559 | 3.10E-52 | -1.69E-46 |
| MS.gene056612 | MS.gene79806 | 0.808607 | 2.85E-50 | -1.69E-46 |
| MS.gene056796 | MS.gene79806 | 0.80061 | 1.33E-48 | -1.69E-46 |
| MS.gene056902 | MS.gene79806 | 0.801774 | 7.68E-49 | -1.69E-46 |
| MS.gene056931 | MS.gene79806 | 0.874846 | 4.91E-68 | -1.69E-46 |
| MS.gene056933 | MS.gene79806 | 0.872533 | 2.96E-67 | -1.69E-46 |
| MS.gene056935 | MS.gene79806 | 0.861289 | 1.14E-63 | -1.69E-46 |
| MS.gene057129 | MS.gene79806 | 0.83488 | 2.32E-56 | -1.69E-46 |
| MS.gene057295 | MS.gene79806 | 0.838093 | 3.53E-57 | -1.69E-46 |
| MS.gene057439 | MS.gene79806 | 0.801468 | 8.88E-49 | -1.69E-46 |
| MS.gene057448 | MS.gene79806 | 0.832918 | 7.19E-56 | -1.69E-46 |
| MS.gene057449 | MS.gene79806 | 0.833438 | 5.33E-56 | -1.69E-46 |
| MS.gene057450 | MS.gene79806 | 0.852855 | 3.51E-61 | -1.69E-46 |
| MS.gene057537 | MS.gene79806 | 0.805295 | 1.43E-49 | -1.69E-46 |
| MS.gene057796 | MS.gene79806 | 0.813982 | 1.94E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene79806 | 0.82254 | 2.24E-53 | -1.69E-46 |
| MS.gene058082 | MS.gene79806 | 0.839416 | 1.61E-57 | -1.69E-46 |
| MS.gene05811 | MS.gene79806 | 0.838927 | 2.15E-57 | -1.69E-46 |
| MS.gene058293 | MS.gene79806 | 0.859612 | 3.67E-63 | -1.69E-46 |
| MS.gene058365 | MS.gene79806 | 0.810853 | 9.37E-51 | -1.69E-46 |
| MS.gene058459 | MS.gene79806 | 0.808677 | 2.75E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene79806 | 0.867478 | 1.33E-65 | -1.69E-46 |
| MS.gene058787 | MS.gene79806 | 0.81011 | 1.36E-50 | -1.69E-46 |
| MS.gene058903 | MS.gene79806 | 0.854164 | 1.48E-61 | -1.69E-46 |
| MS.gene058993 | MS.gene79806 | 0.816967 | 4.21E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene79806 | 0.819492 | 1.13E-52 | -1.69E-46 |
| MS.gene059228 | MS.gene79806 | 0.843154 | 1.67E-58 | -1.69E-46 |
| MS.gene059294 | MS.gene79806 | 0.816623 | 5.03E-52 | -1.69E-46 |
| MS.gene059326 | MS.gene79806 | 0.83846 | 2.84E-57 | -1.69E-46 |
| MS.gene059342 | MS.gene79806 | 0.812184 | 4.82E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene79806 | 0.830864 | 2.31E-55 | -1.69E-46 |
| MS.gene059536 | MS.gene79806 | 0.80335 | 3.64E-49 | -1.69E-46 |
| MS.gene059597 | MS.gene79806 | 0.816945 | 4.26E-52 | -1.69E-46 |
| MS.gene059676 | MS.gene79806 | 0.856522 | 3.04E-62 | -1.69E-46 |
| MS.gene059688 | MS.gene79806 | 0.842799 | 2.07E-58 | -1.69E-46 |
| MS.gene059692 | MS.gene79806 | 0.85887 | 6.12E-63 | -1.69E-46 |
| MS.gene059695 | MS.gene79806 | 0.855531 | 5.93E-62 | -1.69E-46 |
| MS.gene059711 | MS.gene79806 | 0.848012 | 8.04E-60 | -1.69E-46 |
| MS.gene05984 | MS.gene79806 | 0.805303 | 1.42E-49 | -1.69E-46 |
| MS.gene059894 | MS.gene79806 | 0.830639 | 2.62E-55 | -1.69E-46 |
| MS.gene059960 | MS.gene79806 | 0.826141 | 3.19E-54 | -1.69E-46 |
| MS.gene059974 | MS.gene79806 | 0.908899 | 1.03E-81 | -1.69E-46 |
| MS.gene060005 | MS.gene79806 | 0.908183 | 2.26E-81 | -1.69E-46 |
| MS.gene060356 | MS.gene79806 | 0.834963 | 2.21E-56 | -1.69E-46 |
| MS.gene06037 | MS.gene79806 | 0.85804 | 1.08E-62 | -1.69E-46 |
| MS.gene060559 | MS.gene79806 | 0.863781 | 1.95E-64 | -1.69E-46 |
| MS.gene060799 | MS.gene79806 | 0.860601 | 1.84E-63 | -1.69E-46 |
| MS.gene060800 | MS.gene79806 | 0.867435 | 1.37E-65 | -1.69E-46 |
| MS.gene060801 | MS.gene79806 | 0.861776 | 8.09E-64 | -1.69E-46 |
| MS.gene060818 | MS.gene79806 | 0.811852 | 5.69E-51 | -1.69E-46 |
| MS.gene060837 | MS.gene79806 | 0.812733 | 3.65E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene79806 | 0.824861 | 6.42E-54 | -1.69E-46 |
| MS.gene061051 | MS.gene79806 | -0.837028 | 6.62E-57 | -1.69E-46 |
| MS.gene061112 | MS.gene79806 | 0.800878 | 1.17E-48 | -1.69E-46 |
| MS.gene061200 | MS.gene79806 | 0.84922 | 3.72E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79806.t1 | MTR_3g085210 | 96.875 | 192 | 6 | 0 | 1 | 192 | 1 | 192 | 1.17e-135 | 377 |
| MS.gene79806.t1 | MTR_8g446830 | 32.450 | 151 | 90 | 5 | 9 | 151 | 12 | 158 | 7.33e-16 | 72.4 |
| MS.gene79806.t1 | MTR_7g095230 | 28.070 | 114 | 79 | 2 | 1 | 114 | 1 | 111 | 5.00e-12 | 62.0 |
| MS.gene79806.t1 | MTR_5g006950 | 28.125 | 192 | 113 | 7 | 1 | 191 | 1 | 168 | 5.13e-12 | 61.6 |
| MS.gene79806.t1 | MTR_1g103450 | 35.714 | 84 | 49 | 1 | 30 | 113 | 26 | 104 | 7.72e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79806.t1 | AT1G27950 | 49.020 | 153 | 71 | 3 | 31 | 183 | 34 | 179 | 1.77e-42 | 141 |
| MS.gene79806.t1 | AT2G44290 | 34.395 | 157 | 91 | 7 | 10 | 161 | 13 | 162 | 4.86e-18 | 78.6 |
| MS.gene79806.t1 | AT2G44300 | 34.615 | 130 | 72 | 6 | 42 | 164 | 45 | 168 | 1.74e-14 | 68.9 |
| MS.gene79806.t1 | AT1G55260 | 26.829 | 164 | 100 | 6 | 1 | 159 | 44 | 192 | 5.99e-13 | 65.5 |
| MS.gene79806.t1 | AT1G55260 | 26.829 | 164 | 103 | 6 | 1 | 159 | 44 | 195 | 9.72e-13 | 64.7 |
Find 47 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATACCCATGCTCTTGCTTTC+AGG | 0.112193 | 3.4:+79583742 | None:intergenic |
| GCATCACAGCATTCCTTCTT+TGG | 0.234849 | 3.4:+79583835 | None:intergenic |
| AAGCAAGAGCATGGGTATTC+AGG | 0.320822 | 3.4:-79583737 | MS.gene79806:CDS |
| CCATGTCTGGACTTTGCAAC+TGG | 0.330521 | 3.4:-79583871 | MS.gene79806:CDS |
| GTTTATGTGTCTGTGTGTTT+TGG | 0.332428 | 3.4:-79583968 | MS.gene79806:CDS |
| CTCTAATGGAGCTGAAGATT+TGG | 0.343257 | 3.4:-79583929 | MS.gene79806:CDS |
| CTTGCCGAGGTCGGAGTTGT+AGG | 0.376495 | 3.4:+79579764 | None:intergenic |
| CTCATCATAGGTGGCTCTAA+TGG | 0.381692 | 3.4:-79583943 | MS.gene79806:CDS |
| TGTTGATCATGACAGGTCTA+AGG | 0.387679 | 3.4:+79579723 | None:intergenic |
| TACCCATGCTCTTGCTTTCA+GGG | 0.394358 | 3.4:+79583743 | None:intergenic |
| ACATAAACATTTGATGTTGT+TGG | 0.404273 | 3.4:+79583983 | None:intergenic |
| GGTATGGTGACAGAGCTTCT+TGG | 0.409463 | 3.4:-79579878 | MS.gene79806:intron |
| CAACGTGATAACGGTGACTT+TGG | 0.415623 | 3.4:-79579702 | MS.gene79806:CDS |
| GTTCTTGCTGCAGTACCTGC+TGG | 0.431862 | 3.4:-79579674 | MS.gene79806:CDS |
| TATCATTCAACAGACTCATA+AGG | 0.436377 | 3.4:-79583770 | MS.gene79806:CDS |
| TTATCAGCATTTATACATGA+TGG | 0.456328 | 3.4:-79579649 | None:intergenic |
| ATCATTCAACAGACTCATAA+GGG | 0.476714 | 3.4:-79583769 | MS.gene79806:CDS |
| CAGCATTCCTTCTTTGGTGT+AGG | 0.481891 | 3.4:+79583841 | None:intergenic |
| ATCACGTTGTTGATCATGAC+AGG | 0.490311 | 3.4:+79579716 | None:intergenic |
| CCAGTTGCAAAGTCCAGACA+TGG | 0.534963 | 3.4:+79583871 | None:intergenic |
| CATGATCAACAACGTGATAA+CGG | 0.539145 | 3.4:-79579711 | MS.gene79806:CDS |
| GGCTTCAAAGTGTGGATCAG+TGG | 0.542878 | 3.4:-79583908 | MS.gene79806:CDS |
| GAAGATTTGGCTTCAAAGTG+TGG | 0.543294 | 3.4:-79583916 | MS.gene79806:CDS |
| CATGTCTGGACTTTGCAACT+GGG | 0.544788 | 3.4:-79583870 | MS.gene79806:CDS |
| GAAAGCACCTACACCAAAGA+AGG | 0.545842 | 3.4:-79583848 | MS.gene79806:CDS |
| GTAGTTGCAGCAGCTGATGA+AGG | 0.549439 | 3.4:+79579794 | None:intergenic |
| CCACCTGTGCTTGCCGAGGT+CGG | 0.550705 | 3.4:+79579755 | None:intergenic |
| ACTGGGACAGTCGGAAATGT+TGG | 0.550714 | 3.4:+79583669 | None:intergenic |
| ATGATATAGCACAAACACTC+TGG | 0.553006 | 3.4:+79583787 | None:intergenic |
| AACTCCTACAACTCCGACCT+CGG | 0.556736 | 3.4:-79579768 | MS.gene79806:CDS |
| ACTCCGACCTCGGCAAGCAC+AGG | 0.560509 | 3.4:-79579758 | MS.gene79806:CDS |
| ATTAAACTTACTGGGACAGT+CGG | 0.571110 | 3.4:+79583660 | None:intergenic |
| TAGCCCTGAAAGCAAGAGCA+TGG | 0.574374 | 3.4:-79583746 | MS.gene79806:CDS |
| TGATGCAGCTAACAGTATCA+AGG | 0.574408 | 3.4:-79583818 | MS.gene79806:CDS |
| CCGACCTCGGCAAGCACAGG+TGG | 0.579084 | 3.4:-79579755 | MS.gene79806:CDS |
| CCGTTGACGTGACAAACAGT+AGG | 0.581377 | 3.4:+79583694 | None:intergenic |
| GCAGCAGCTGATGAAGGAGT+AGG | 0.585517 | 3.4:+79579800 | None:intergenic |
| TTTAAAGATTGCAGCGTCGG+GGG | 0.597687 | 3.4:+79579841 | None:intergenic |
| AGCTAACAGTATCAAGGCAA+CGG | 0.604523 | 3.4:-79583812 | MS.gene79806:CDS |
| TAAATGCTGATAAATCCAGC+AGG | 0.610193 | 3.4:+79579659 | None:intergenic |
| AGCCCTGAAAGCAAGAGCAT+GGG | 0.629636 | 3.4:-79583745 | MS.gene79806:CDS |
| GATCATGACAGGTCTAAGGT+TGG | 0.632709 | 3.4:+79579727 | None:intergenic |
| TGAACCACCTGTGCTTGCCG+AGG | 0.642075 | 3.4:+79579751 | None:intergenic |
| GGTCGGAGTTGTAGGAGTTG+CGG | 0.642214 | 3.4:+79579772 | None:intergenic |
| CGTTGACGTGACAAACAGTA+GGG | 0.644084 | 3.4:+79583695 | None:intergenic |
| AGGTACTGCAGCAAGAACAA+TGG | 0.653525 | 3.4:+79579679 | None:intergenic |
| CCTACTGTTTGTCACGTCAA+CGG | 0.678772 | 3.4:-79583694 | MS.gene79806:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATCAAAGTATATATT+GGG | + | chr3.4:79583253-79583272 | None:intergenic | 10.0% |
| !! | TATATACTATATAAAAATGT+TGG | + | chr3.4:79582705-79582724 | None:intergenic | 10.0% |
| !! | TTATATAGTATATAAAACAA+GGG | - | chr3.4:79582711-79582730 | MS.gene79806:intron | 10.0% |
| !! | TTTATATAGTATATAAAACA+AGG | - | chr3.4:79582710-79582729 | MS.gene79806:intron | 10.0% |
| !!! | GAAAATATAATTTTTAACAT+AGG | - | chr3.4:79582805-79582824 | MS.gene79806:intron | 10.0% |
| !! | AAAAATAAATGTATTTGAAC+TGG | + | chr3.4:79580775-79580794 | None:intergenic | 15.0% |
| !! | ACATATAATAACATGAATAT+TGG | - | chr3.4:79583744-79583763 | MS.gene79806:CDS | 15.0% |
| !! | ATATATGACATTAATTTATC+AGG | + | chr3.4:79580061-79580080 | None:intergenic | 15.0% |
| !! | ATTTAATAAAATAAGGTTAC+TGG | + | chr3.4:79580652-79580671 | None:intergenic | 15.0% |
| !! | CATATATTTAACATAATGAA+AGG | + | chr3.4:79583362-79583381 | None:intergenic | 15.0% |
| !! | GAAATAATCAAAGTATATAT+TGG | + | chr3.4:79583254-79583273 | None:intergenic | 15.0% |
| !! | TATACATTAGTTAAAAAGTA+TGG | - | chr3.4:79581534-79581553 | MS.gene79806:intron | 15.0% |
| !! | TTGGGTTAATTTAAAAAAAA+GGG | - | chr3.4:79583433-79583452 | MS.gene79806:intron | 15.0% |
| !! | TTTGTTTATAAGAAAAACTT+TGG | + | chr3.4:79580803-79580822 | None:intergenic | 15.0% |
| !!! | AATTTTTAACATAGGTTTTA+AGG | - | chr3.4:79582813-79582832 | MS.gene79806:intron | 15.0% |
| !!! | AGAGTTTTCTAATAAATTAT+GGG | - | chr3.4:79582131-79582150 | MS.gene79806:intron | 15.0% |
| !!! | ATTAGTGTATAATCATTTTT+TGG | - | chr3.4:79583143-79583162 | MS.gene79806:intron | 15.0% |
| !!! | CTTATTATATTTGATTTTTC+CGG | - | chr3.4:79580539-79580558 | MS.gene79806:intron | 15.0% |
| !!! | TAGAGTTTTCTAATAAATTA+TGG | - | chr3.4:79582130-79582149 | MS.gene79806:intron | 15.0% |
| !!! | TTTGGGTTAATTTAAAAAAA+AGG | - | chr3.4:79583432-79583451 | MS.gene79806:intron | 15.0% |
| !!! | TTTTTTTTGTTACACAATAA+TGG | - | chr3.4:79580153-79580172 | MS.gene79806:intron | 15.0% |
| !! | AAAACTTATGTTAAAGTTTG+TGG | - | chr3.4:79581266-79581285 | MS.gene79806:intron | 20.0% |
| !! | AAAGGAAAAATTAAACTTAC+TGG | + | chr3.4:79579995-79580014 | None:intergenic | 20.0% |
| !! | AAGGAAAAATTAAACTTACT+GGG | + | chr3.4:79579994-79580013 | None:intergenic | 20.0% |
| !! | AATATTCCATCAATTATTCT+TGG | - | chr3.4:79583409-79583428 | MS.gene79806:intron | 20.0% |
| !! | ATGCATGATATTATACATAT+TGG | - | chr3.4:79580079-79580098 | MS.gene79806:intron | 20.0% |
| !! | ATTAAGATGATAAAAGTTTG+TGG | + | chr3.4:79583125-79583144 | None:intergenic | 20.0% |
| !! | ATTTATTAGAAAACTCTAAC+CGG | + | chr3.4:79582128-79582147 | None:intergenic | 20.0% |
| !! | CTATTACATAAAACTATGAT+AGG | - | chr3.4:79580240-79580259 | MS.gene79806:intron | 20.0% |
| !! | GATTTCTGACATATAATTTA+TGG | + | chr3.4:79582327-79582346 | None:intergenic | 20.0% |
| !! | TAATAACATGAATATTGGTA+TGG | - | chr3.4:79583749-79583768 | MS.gene79806:CDS | 20.0% |
| !! | TAATTGCGCAAAATAAATTA+AGG | - | chr3.4:79582093-79582112 | MS.gene79806:intron | 20.0% |
| !! | TAGCAATTAACGATAAAAAA+AGG | + | chr3.4:79580013-79580032 | None:intergenic | 20.0% |
| !! | TGCATGATATTATACATATT+GGG | - | chr3.4:79580080-79580099 | MS.gene79806:intron | 20.0% |
| !! | TTAAGATGATAAAAGTTTGT+GGG | + | chr3.4:79583124-79583143 | None:intergenic | 20.0% |
| !! | TTAATGAGATCATTAAGTAA+AGG | + | chr3.4:79582447-79582466 | None:intergenic | 20.0% |
| !!! | AAGACATAGTTTCTTTTTTT+GGG | + | chr3.4:79582195-79582214 | None:intergenic | 20.0% |
| !!! | ATATCTAATTATCTCTTTTG+TGG | - | chr3.4:79580670-79580689 | MS.gene79806:intron | 20.0% |
| !!! | ATGGAGTATTAATTTTACAT+TGG | - | chr3.4:79582553-79582572 | MS.gene79806:intron | 20.0% |
| !!! | CTATGATAAACTTCTAATTT+TGG | + | chr3.4:79583498-79583517 | None:intergenic | 20.0% |
| !!! | TGTAATTTTAGAAACATGAT+AGG | - | chr3.4:79582059-79582078 | MS.gene79806:intron | 20.0% |
| !!! | TTTACATTCCACATTTTATT+TGG | - | chr3.4:79580940-79580959 | MS.gene79806:intron | 20.0% |
| !!! | TTTTTGCATTGAAAATTGTA+CGG | + | chr3.4:79582252-79582271 | None:intergenic | 20.0% |
| !!! | TTTTTTGACCAAATAAAATG+TGG | + | chr3.4:79580951-79580970 | None:intergenic | 20.0% |
| ! | ACAATAATGGTTCCAATTTA+CGG | - | chr3.4:79580166-79580185 | MS.gene79806:intron | 25.0% |
| ! | ACATAAACATTTGATGTTGT+TGG | + | chr3.4:79579663-79579682 | None:intergenic | 25.0% |
| ! | ATCTATTGCATATTTGATGT+CGG | - | chr3.4:79580382-79580401 | MS.gene79806:intron | 25.0% |
| ! | ATTGTTTAAGCATCTAAAAG+TGG | + | chr3.4:79582278-79582297 | None:intergenic | 25.0% |
| ! | CCTAGAAAAGAAAAGAAAAT+TGG | + | chr3.4:79582003-79582022 | None:intergenic | 25.0% |
| ! | TAAGATGATAAAAGTTTGTG+GGG | + | chr3.4:79583123-79583142 | None:intergenic | 25.0% |
| ! | TAGACTTATATCACAATTTC+AGG | - | chr3.4:79580293-79580312 | MS.gene79806:intron | 25.0% |
| ! | TTGCGATAACTATTATAGAT+GGG | - | chr3.4:79581811-79581830 | MS.gene79806:intron | 25.0% |
| ! | TTTAACAAACCGTAATGTTT+GGG | - | chr3.4:79580465-79580484 | MS.gene79806:intron | 25.0% |
| !! | AACATTTAAGACATTGTTGT+TGG | + | chr3.4:79582405-79582424 | None:intergenic | 25.0% |
| !! | ACTACAAATGACACTATTTT+TGG | - | chr3.4:79581767-79581786 | MS.gene79806:intron | 25.0% |
| !! | CAATCTTTAAAAATGCTTCA+AGG | - | chr3.4:79583814-79583833 | MS.gene79806:CDS | 25.0% |
| !! | CCAATTTTCTTTTCTTTTCT+AGG | - | chr3.4:79582000-79582019 | MS.gene79806:intron | 25.0% |
| !! | CTAATATATGCTCTAAATGT+TGG | + | chr3.4:79582676-79582695 | None:intergenic | 25.0% |
| !! | CTCTTTTAAATAAAATCCGA+GGG | + | chr3.4:79580726-79580745 | None:intergenic | 25.0% |
| !! | GTATAGGAGTATAAACATAA+GGG | + | chr3.4:79580866-79580885 | None:intergenic | 25.0% |
| !! | TCTCTTTTAAATAAAATCCG+AGG | + | chr3.4:79580727-79580746 | None:intergenic | 25.0% |
| !! | TGTATAGGAGTATAAACATA+AGG | + | chr3.4:79580867-79580886 | None:intergenic | 25.0% |
| !! | TTTTAACAAACCGTAATGTT+TGG | - | chr3.4:79580464-79580483 | MS.gene79806:intron | 25.0% |
| !!! | AAAAGCTAACTTGTGTTTTT+AGG | - | chr3.4:79582734-79582753 | MS.gene79806:intron | 25.0% |
| !!! | ATTGGACATGTATTTTGAAA+CGG | - | chr3.4:79581593-79581612 | MS.gene79806:intron | 25.0% |
| !!! | CAAGACATAGTTTCTTTTTT+TGG | + | chr3.4:79582196-79582215 | None:intergenic | 25.0% |
| !!! | TCATGGATGATAGTTTTAAA+AGG | + | chr3.4:79583698-79583717 | None:intergenic | 25.0% |
| !!! | TTGGTAGATATTTTTGTTGT+TGG | - | chr3.4:79581786-79581805 | MS.gene79806:intron | 25.0% |
| AACAAATCACTCACACTAAA+TGG | - | chr3.4:79582905-79582924 | MS.gene79806:intron | 30.0% | |
| AATGACCTGTCATCTATATT+GGG | - | chr3.4:79581855-79581874 | MS.gene79806:intron | 30.0% | |
| ATAGTGCACATTGCAAAAAT+TGG | - | chr3.4:79581575-79581594 | MS.gene79806:intron | 30.0% | |
| ATATGCATGAAACCGTAAAT+TGG | + | chr3.4:79580181-79580200 | None:intergenic | 30.0% | |
| ATCATTCAACAGACTCATAA+GGG | - | chr3.4:79579874-79579893 | MS.gene79806:intron | 30.0% | |
| ATTGATATGCGAACTAATGA+AGG | + | chr3.4:79581967-79581986 | None:intergenic | 30.0% | |
| CCATCAATTATTCTTGGTTT+GGG | - | chr3.4:79583415-79583434 | MS.gene79806:intron | 30.0% | |
| GTCAGAAATCTTATGTATAG+AGG | - | chr3.4:79582337-79582356 | MS.gene79806:intron | 30.0% | |
| GTTGCGATAACTATTATAGA+TGG | - | chr3.4:79581810-79581829 | MS.gene79806:intron | 30.0% | |
| TATAAATACCCAACTCATTC+TGG | - | chr3.4:79583336-79583355 | MS.gene79806:intron | 30.0% | |
| TATCATTCAACAGACTCATA+AGG | - | chr3.4:79579873-79579892 | MS.gene79806:intron | 30.0% | |
| TCCATCAATTATTCTTGGTT+TGG | - | chr3.4:79583414-79583433 | MS.gene79806:intron | 30.0% | |
| TCTTATGTATAGAGGAACAA+AGG | - | chr3.4:79582345-79582364 | MS.gene79806:intron | 30.0% | |
| TGCGATAACTATTATAGATG+GGG | - | chr3.4:79581812-79581831 | MS.gene79806:intron | 30.0% | |
| TGTCATTAGCAACTTTATCA+TGG | + | chr3.4:79583715-79583734 | None:intergenic | 30.0% | |
| TTCCTTAAACAATGCCTTTA+GGG | + | chr3.4:79582172-79582191 | None:intergenic | 30.0% | |
| TTGTTCACTAAAATTGACAC+CGG | + | chr3.4:79580561-79580580 | None:intergenic | 30.0% | |
| ! | CTTGTTATCTTGTGTCTTAA+GGG | - | chr3.4:79583457-79583476 | MS.gene79806:intron | 30.0% |
| ! | TCTAATTATCTCTTTTGTGG+TGG | - | chr3.4:79580673-79580692 | MS.gene79806:intron | 30.0% |
| ! | TCTTGTTATCTTGTGTCTTA+AGG | - | chr3.4:79583456-79583475 | MS.gene79806:intron | 30.0% |
| ! | TTACAAAAGTACAGTTTGTC+CGG | + | chr3.4:79580906-79580925 | None:intergenic | 30.0% |
| ! | TTTCCCTTTCTGACATTTTT+AGG | - | chr3.4:79581027-79581046 | MS.gene79806:intron | 30.0% |
| !! | ATTTTTAAAGATTGCAGCGT+CGG | + | chr3.4:79583808-79583827 | None:intergenic | 30.0% |
| !! | CTATCATATACGTTTGTTGT+CGG | + | chr3.4:79580329-79580348 | None:intergenic | 30.0% |
| !! | CTTGGACATGTATTTTGAAA+CGG | + | chr3.4:79581372-79581391 | None:intergenic | 30.0% |
| !!! | AGTGTGAGTGATTTGTTTTA+TGG | + | chr3.4:79582902-79582921 | None:intergenic | 30.0% |
| !!! | GTGTGAGTGATTTGTTTTAT+GGG | + | chr3.4:79582901-79582920 | None:intergenic | 30.0% |
| AAATATTAACATGTGCCCCA+AGG | + | chr3.4:79583614-79583633 | None:intergenic | 35.0% | |
| AAATGTCAGAAAGGGAAAAG+AGG | + | chr3.4:79581025-79581044 | None:intergenic | 35.0% | |
| AATATTAACATGTGCCCCAA+GGG | + | chr3.4:79583613-79583632 | None:intergenic | 35.0% | |
| AGGCCTAAAAATGTCAGAAA+GGG | + | chr3.4:79581033-79581052 | None:intergenic | 35.0% | |
| ATAACTCTATGCGTGTGTAT+AGG | + | chr3.4:79580882-79580901 | None:intergenic | 35.0% | |
| ATGATATAGCACAAACACTC+TGG | + | chr3.4:79579859-79579878 | None:intergenic | 35.0% | |
| ATGCTTAAACAATGCCCTTA+GGG | - | chr3.4:79582285-79582304 | MS.gene79806:intron | 35.0% | |
| ATTAAACTTACTGGGACAGT+CGG | + | chr3.4:79579986-79580005 | None:intergenic | 35.0% | |
| ATTATCTCTAAACACTCCCT+CGG | - | chr3.4:79580707-79580726 | MS.gene79806:intron | 35.0% | |
| ATTCTCGAACATGCATTCTT+AGG | + | chr3.4:79582529-79582548 | None:intergenic | 35.0% | |
| ATTTAACCTGTCTAGATGCA+AGG | + | chr3.4:79581920-79581939 | None:intergenic | 35.0% | |
| CATGATCAACAACGTGATAA+CGG | - | chr3.4:79583932-79583951 | MS.gene79806:CDS | 35.0% | |
| CCCAAACCAAGAATAATTGA+TGG | + | chr3.4:79583418-79583437 | None:intergenic | 35.0% | |
| GAATGACCTGTCATCTATAT+TGG | - | chr3.4:79581854-79581873 | MS.gene79806:intron | 35.0% | |
| GATATGGTCTACGTATATAG+TGG | + | chr3.4:79581003-79581022 | None:intergenic | 35.0% | |
| GTTCCTTAAACAATGCCTTT+AGG | + | chr3.4:79582173-79582192 | None:intergenic | 35.0% | |
| TAAATGCTGATAAATCCAGC+AGG | + | chr3.4:79583987-79584006 | None:intergenic | 35.0% | |
| TAAATTAAGGTCATGCTAGC+CGG | - | chr3.4:79582106-79582125 | MS.gene79806:intron | 35.0% | |
| TCAAAAAGTGATTCCATGTC+TGG | - | chr3.4:79579759-79579778 | MS.gene79806:CDS | 35.0% | |
| TGCATCTAGACAGGTTAAAT+GGG | - | chr3.4:79581920-79581939 | MS.gene79806:intron | 35.0% | |
| TGCATGTTCGAGAATTCAAA+TGG | - | chr3.4:79582534-79582553 | MS.gene79806:intron | 35.0% | |
| TGTTCTTAATCATCGACAAG+AGG | + | chr3.4:79581080-79581099 | None:intergenic | 35.0% | |
| TTGCATCTAGACAGGTTAAA+TGG | - | chr3.4:79581919-79581938 | MS.gene79806:intron | 35.0% | |
| ! | GTTTATGTGTCTGTGTGTTT+TGG | - | chr3.4:79579675-79579694 | MS.gene79806:CDS | 35.0% |
| ! | GTTTCTGCAATTTTCACAAG+AGG | + | chr3.4:79581053-79581072 | None:intergenic | 35.0% |
| ! | TACAAAAGTACAGTTTGTCC+GGG | + | chr3.4:79580905-79580924 | None:intergenic | 35.0% |
| ! | TGATCGACTTAGTTAGAGTA+CGG | + | chr3.4:79580353-79580372 | None:intergenic | 35.0% |
| !! | TTTTTAAAGATTGCAGCGTC+GGG | + | chr3.4:79583807-79583826 | None:intergenic | 35.0% |
| !!! | ACTTAGACTAGCTTCTTTTC+AGG | + | chr3.4:79583276-79583295 | None:intergenic | 35.0% |
| !!! | GACATGTATTTTGAAACGGA+GGG | - | chr3.4:79581597-79581616 | MS.gene79806:intron | 35.0% |
| !!! | GACATGTATTTTGAAACGGA+TGG | + | chr3.4:79581616-79581597 | None:intergenic | 35.0% |
| AAATGCTAACAAGTGCCCTA+AGG | + | chr3.4:79582303-79582322 | None:intergenic | 40.0% | |
| AATGAAAGGCCAGAATGAGT+TGG | + | chr3.4:79583348-79583367 | None:intergenic | 40.0% | |
| AATGCTAACAAGTGCCCTAA+GGG | + | chr3.4:79582302-79582321 | None:intergenic | 40.0% | |
| AATTCCTTAGCATATGCCCT+TGG | - | chr3.4:79583594-79583613 | MS.gene79806:intron | 40.0% | |
| ACCTGTCATCTATATTGGGT+GGG | - | chr3.4:79581859-79581878 | MS.gene79806:intron | 40.0% | |
| AGCAGCAGTAGTAGTATATG+TGG | - | chr3.4:79583383-79583402 | MS.gene79806:intron | 40.0% | |
| AGCTAACAGTATCAAGGCAA+CGG | - | chr3.4:79579831-79579850 | MS.gene79806:CDS | 40.0% | |
| ATCACGTTGTTGATCATGAC+AGG | + | chr3.4:79583930-79583949 | None:intergenic | 40.0% | |
| ATGAAAGGCCAGAATGAGTT+GGG | + | chr3.4:79583347-79583366 | None:intergenic | 40.0% | |
| ATTCCTTAGCATATGCCCTT+GGG | - | chr3.4:79583595-79583614 | MS.gene79806:intron | 40.0% | |
| CAGAAAGGGAAAAGAGGATA+TGG | + | chr3.4:79581019-79581038 | None:intergenic | 40.0% | |
| CATATGTGAAGTGGTTGACT+TGG | + | chr3.4:79581390-79581409 | None:intergenic | 40.0% | |
| CCAACGCAAGAGAATATTGT+GGG | + | chr3.4:79581206-79581225 | None:intergenic | 40.0% | |
| CCACAATATTCTCTTGCGTT+GGG | - | chr3.4:79581204-79581223 | MS.gene79806:intron | 40.0% | |
| CTACACAAGCCCAAACATTA+CGG | + | chr3.4:79580477-79580496 | None:intergenic | 40.0% | |
| CTCTAATGGAGCTGAAGATT+TGG | - | chr3.4:79579714-79579733 | MS.gene79806:CDS | 40.0% | |
| GAGGCCTAAAAATGTCAGAA+AGG | + | chr3.4:79581034-79581053 | None:intergenic | 40.0% | |
| GATGCTTAAACAATGCCCTT+AGG | - | chr3.4:79582284-79582303 | MS.gene79806:intron | 40.0% | |
| GCAGCAGTAGTAGTATATGT+GGG | - | chr3.4:79583384-79583403 | MS.gene79806:intron | 40.0% | |
| GTGACCATTATTGTGAGAGA+GGG | + | chr3.4:79580127-79580146 | None:intergenic | 40.0% | |
| GTGCATTTGCATATGTGAAG+TGG | + | chr3.4:79581399-79581418 | None:intergenic | 40.0% | |
| TATTGTGAGAGAGGGAGAAT+AGG | + | chr3.4:79580119-79580138 | None:intergenic | 40.0% | |
| TGACAGGTCATTCAAGATTG+AGG | + | chr3.4:79581847-79581866 | None:intergenic | 40.0% | |
| TGATGCAGCTAACAGTATCA+AGG | - | chr3.4:79579825-79579844 | MS.gene79806:CDS | 40.0% | |
| TGTGACCATTATTGTGAGAG+AGG | + | chr3.4:79580128-79580147 | None:intergenic | 40.0% | |
| TGTTGATCATGACAGGTCTA+AGG | + | chr3.4:79583923-79583942 | None:intergenic | 40.0% | |
| TTAATCATCGACAAGAGGCA+GGG | + | chr3.4:79581075-79581094 | None:intergenic | 40.0% | |
| TTCTCCCTCTCTCACAATAA+TGG | - | chr3.4:79580120-79580139 | MS.gene79806:intron | 40.0% | |
| ! | ACATAAGGGAAGCTACGTTT+TGG | + | chr3.4:79580852-79580871 | None:intergenic | 40.0% |
| ! | CTTTCGAACGATCGTCTTTT+GGG | - | chr3.4:79583031-79583050 | MS.gene79806:intron | 40.0% |
| ! | GAAGATTTGGCTTCAAAGTG+TGG | - | chr3.4:79579727-79579746 | MS.gene79806:CDS | 40.0% |
| ! | GATCGACTTAGTTAGAGTAC+GGG | + | chr3.4:79580352-79580371 | None:intergenic | 40.0% |
| ! | TCTTTCGAACGATCGTCTTT+TGG | - | chr3.4:79583030-79583049 | MS.gene79806:intron | 40.0% |
| ! | TGTCTTAAGGGCACAAGTTA+AGG | - | chr3.4:79583469-79583488 | MS.gene79806:intron | 40.0% |
| !! | TGCCCTAAAGGCATTGTTTA+AGG | - | chr3.4:79582167-79582186 | MS.gene79806:intron | 40.0% |
| !! | TTTTAAAGATTGCAGCGTCG+GGG | + | chr3.4:79583806-79583825 | None:intergenic | 40.0% |
| !!! | CAGACTCAAGTTTTTTCACG+AGG | - | chr3.4:79582959-79582978 | MS.gene79806:intron | 40.0% |
| !!! | GGACATGTATTTTGAAACGG+AGG | - | chr3.4:79581596-79581615 | MS.gene79806:intron | 40.0% |
| !!! | TGTGTTTTGGCTCTCATCAT+AGG | - | chr3.4:79579688-79579707 | MS.gene79806:CDS | 40.0% |
| ACACACGCATAGAGTTATCC+CGG | - | chr3.4:79580884-79580903 | MS.gene79806:intron | 45.0% | |
| ATACCCATGCTCTTGCTTTC+AGG | + | chr3.4:79579904-79579923 | None:intergenic | 45.0% | |
| CAATATTCTCTTGCGTTGGG+AGG | - | chr3.4:79581207-79581226 | MS.gene79806:intron | 45.0% | |
| CATGTCTGGACTTTGCAACT+GGG | - | chr3.4:79579773-79579792 | MS.gene79806:CDS | 45.0% | |
| CCCAACGCAAGAGAATATTG+TGG | + | chr3.4:79581207-79581226 | None:intergenic | 45.0% | |
| CCCACAATATTCTCTTGCGT+TGG | - | chr3.4:79581203-79581222 | MS.gene79806:intron | 45.0% | |
| CCTACTGTTTGTCACGTCAA+CGG | - | chr3.4:79579949-79579968 | MS.gene79806:intron | 45.0% | |
| CGTTGACGTGACAAACAGTA+GGG | + | chr3.4:79579951-79579970 | None:intergenic | 45.0% | |
| CTTAATCATCGACAAGAGGC+AGG | + | chr3.4:79581076-79581095 | None:intergenic | 45.0% | |
| CTTGCTAACAAGTGCCCTAA+AGG | - | chr3.4:79582155-79582174 | MS.gene79806:intron | 45.0% | |
| GACCTGTCATCTATATTGGG+TGG | - | chr3.4:79581858-79581877 | MS.gene79806:intron | 45.0% | |
| GCATCACAGCATTCCTTCTT+TGG | + | chr3.4:79579811-79579830 | None:intergenic | 45.0% | |
| TACCCATGCTCTTGCTTTCA+GGG | + | chr3.4:79579903-79579922 | None:intergenic | 45.0% | |
| TCCCACCCAATATAGATGAC+AGG | + | chr3.4:79581863-79581882 | None:intergenic | 45.0% | |
| TGTCATCTATATTGGGTGGG+AGG | - | chr3.4:79581862-79581881 | MS.gene79806:intron | 45.0% | |
| TTCCTTAGCATATGCCCTTG+GGG | - | chr3.4:79583596-79583615 | MS.gene79806:intron | 45.0% | |
| ! | AAGCAAGAGCATGGGTATTC+AGG | - | chr3.4:79579906-79579925 | MS.gene79806:intron | 45.0% |
| ! | AGGTACTGCAGCAAGAACAA+TGG | + | chr3.4:79583967-79583986 | None:intergenic | 45.0% |
| ! | CAGCATTCCTTCTTTGGTGT+AGG | + | chr3.4:79579805-79579824 | None:intergenic | 45.0% |
| ! | GATCATGACAGGTCTAAGGT+TGG | + | chr3.4:79583919-79583938 | None:intergenic | 45.0% |
| ! | TTTAAAGATTGCAGCGTCGG+GGG | + | chr3.4:79583805-79583824 | None:intergenic | 45.0% |
| !! | CAACGTGATAACGGTGACTT+TGG | - | chr3.4:79583941-79583960 | MS.gene79806:CDS | 45.0% |
| !! | CTCATCATAGGTGGCTCTAA+TGG | - | chr3.4:79579700-79579719 | MS.gene79806:CDS | 45.0% |
| !! | GAAAGCACCTACACCAAAGA+AGG | - | chr3.4:79579795-79579814 | MS.gene79806:CDS | 45.0% |
| !!! | GTTTTGGCTCTCATCATAGG+TGG | - | chr3.4:79579691-79579710 | MS.gene79806:CDS | 45.0% |
| !! | ATTAGATATTTAATAAAATA+AGG | + | chr3.4:79580659-79580678 | None:intergenic | 5.0% |
| !!! | AAATATAAAAATTTAACTTT+TGG | + | chr3.4:79582856-79582875 | None:intergenic | 5.0% |
| !!! | ATACTATTAATTTTTTTTTT+TGG | - | chr3.4:79581662-79581681 | MS.gene79806:intron | 5.0% |
| AACTCCTACAACTCCGACCT+CGG | - | chr3.4:79583875-79583894 | MS.gene79806:CDS | 50.0% | |
| ACTGGGACAGTCGGAAATGT+TGG | + | chr3.4:79579977-79579996 | None:intergenic | 50.0% | |
| ATTCTCTTGCGTTGGGAGGT+TGG | - | chr3.4:79581211-79581230 | MS.gene79806:intron | 50.0% | |
| CCAGTTGCAAAGTCCAGACA+TGG | + | chr3.4:79579775-79579794 | None:intergenic | 50.0% | |
| CCATGTCTGGACTTTGCAAC+TGG | - | chr3.4:79579772-79579791 | MS.gene79806:CDS | 50.0% | |
| CCGTTGACGTGACAAACAGT+AGG | + | chr3.4:79579952-79579971 | None:intergenic | 50.0% | |
| GGAGGATGAGAATTGGTTGC+AGG | - | chr3.4:79581880-79581899 | MS.gene79806:intron | 50.0% | |
| GGCTTCAAAGTGTGGATCAG+TGG | - | chr3.4:79579735-79579754 | MS.gene79806:CDS | 50.0% | |
| GGTATGGTGACAGAGCTTCT+TGG | - | chr3.4:79583765-79583784 | MS.gene79806:CDS | 50.0% | |
| GTAGTTGCAGCAGCTGATGA+AGG | + | chr3.4:79583852-79583871 | None:intergenic | 50.0% | |
| TAGCCCTGAAAGCAAGAGCA+TGG | - | chr3.4:79579897-79579916 | MS.gene79806:intron | 50.0% | |
| TGCAGACCTTGCATCTAGAC+AGG | - | chr3.4:79581911-79581930 | MS.gene79806:intron | 50.0% | |
| TTCTCTTGCGTTGGGAGGTT+GGG | - | chr3.4:79581212-79581231 | MS.gene79806:intron | 50.0% | |
| TTGGGTGGGAGGATGAGAAT+TGG | - | chr3.4:79581873-79581892 | MS.gene79806:intron | 50.0% | |
| ! | AGCCCTGAAAGCAAGAGCAT+GGG | - | chr3.4:79579898-79579917 | MS.gene79806:intron | 50.0% |
| !!! | AGGGAAGCTACGTTTTGGAG+AGG | + | chr3.4:79580847-79580866 | None:intergenic | 50.0% |
| GCAGCAGCTGATGAAGGAGT+AGG | + | chr3.4:79583846-79583865 | None:intergenic | 55.0% | |
| GGTCGGAGTTGTAGGAGTTG+CGG | + | chr3.4:79583874-79583893 | None:intergenic | 55.0% | |
| GTTCTTGCTGCAGTACCTGC+TGG | - | chr3.4:79583969-79583988 | MS.gene79806:CDS | 55.0% | |
| ! | TGCCCCAAGGGCATATGCTA+AGG | + | chr3.4:79583601-79583620 | None:intergenic | 55.0% |
| CTTGCCGAGGTCGGAGTTGT+AGG | + | chr3.4:79583882-79583901 | None:intergenic | 60.0% | |
| TGAACCACCTGTGCTTGCCG+AGG | + | chr3.4:79583895-79583914 | None:intergenic | 60.0% | |
| ACTCCGACCTCGGCAAGCAC+AGG | - | chr3.4:79583885-79583904 | MS.gene79806:CDS | 65.0% | |
| CCACCTGTGCTTGCCGAGGT+CGG | + | chr3.4:79583891-79583910 | None:intergenic | 65.0% | |
| CCGACCTCGGCAAGCACAGG+TGG | - | chr3.4:79583888-79583907 | MS.gene79806:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 79579652 | 79584013 | 79579652 | ID=MS.gene79806 |
| chr3.4 | mRNA | 79579652 | 79584013 | 79579652 | ID=MS.gene79806.t1;Parent=MS.gene79806 |
| chr3.4 | exon | 79583671 | 79584013 | 79583671 | ID=MS.gene79806.t1.exon1;Parent=MS.gene79806.t1 |
| chr3.4 | CDS | 79583671 | 79584013 | 79583671 | ID=cds.MS.gene79806.t1;Parent=MS.gene79806.t1 |
| chr3.4 | exon | 79579652 | 79579887 | 79579652 | ID=MS.gene79806.t1.exon2;Parent=MS.gene79806.t1 |
| chr3.4 | CDS | 79579652 | 79579887 | 79579652 | ID=cds.MS.gene79806.t1;Parent=MS.gene79806.t1 |
| Gene Sequence |
| Protein sequence |
