Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80712.t1 | XP_024640113.1 | 81.3 | 523 | 94 | 1 | 17 | 539 | 1 | 519 | 1.20E-219 | 772.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80712.t1 | A0A396HNU0 | 81.3 | 523 | 94 | 1 | 17 | 539 | 1 | 519 | 8.3e-220 | 772.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene80712 | 0.819134 | 1.36E-52 | -1.69E-46 |
| MS.gene049254 | MS.gene80712 | 0.859152 | 5.04E-63 | -1.69E-46 |
| MS.gene049271 | MS.gene80712 | 0.802287 | 6.03E-49 | -1.69E-46 |
| MS.gene049343 | MS.gene80712 | 0.820591 | 6.32E-53 | -1.69E-46 |
| MS.gene049350 | MS.gene80712 | 0.827395 | 1.60E-54 | -1.69E-46 |
| MS.gene049368 | MS.gene80712 | 0.814319 | 1.64E-51 | -1.69E-46 |
| MS.gene049404 | MS.gene80712 | 0.819153 | 1.35E-52 | -1.69E-46 |
| MS.gene049499 | MS.gene80712 | 0.80113 | 1.04E-48 | -1.69E-46 |
| MS.gene049501 | MS.gene80712 | 0.807595 | 4.68E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene80712 | 0.817092 | 3.95E-52 | -1.69E-46 |
| MS.gene049821 | MS.gene80712 | 0.813716 | 2.22E-51 | -1.69E-46 |
| MS.gene049824 | MS.gene80712 | 0.821656 | 3.60E-53 | -1.69E-46 |
| MS.gene049825 | MS.gene80712 | 0.827311 | 1.68E-54 | -1.69E-46 |
| MS.gene049850 | MS.gene80712 | 0.851488 | 8.59E-61 | -1.69E-46 |
| MS.gene049873 | MS.gene80712 | 0.815053 | 1.13E-51 | -1.69E-46 |
| MS.gene049977 | MS.gene80712 | 0.804984 | 1.66E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene80712 | 0.805384 | 1.37E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene80712 | 0.801041 | 1.09E-48 | -1.69E-46 |
| MS.gene050559 | MS.gene80712 | 0.825566 | 4.37E-54 | -1.69E-46 |
| MS.gene050561 | MS.gene80712 | 0.821559 | 3.79E-53 | -1.69E-46 |
| MS.gene050562 | MS.gene80712 | 0.820333 | 7.25E-53 | -1.69E-46 |
| MS.gene050759 | MS.gene80712 | 0.810478 | 1.13E-50 | -1.69E-46 |
| MS.gene050962 | MS.gene80712 | 0.800147 | 1.65E-48 | -1.69E-46 |
| MS.gene051198 | MS.gene80712 | 0.810284 | 1.24E-50 | -1.69E-46 |
| MS.gene051247 | MS.gene80712 | 0.821899 | 3.16E-53 | -1.69E-46 |
| MS.gene051279 | MS.gene80712 | 0.839848 | 1.24E-57 | -1.69E-46 |
| MS.gene051332 | MS.gene80712 | 0.827242 | 1.74E-54 | -1.69E-46 |
| MS.gene051594 | MS.gene80712 | 0.804367 | 2.24E-49 | -1.69E-46 |
| MS.gene051628 | MS.gene80712 | 0.804078 | 2.57E-49 | -1.69E-46 |
| MS.gene051676 | MS.gene80712 | 0.813347 | 2.68E-51 | -1.69E-46 |
| MS.gene051700 | MS.gene80712 | 0.837295 | 5.66E-57 | -1.69E-46 |
| MS.gene051719 | MS.gene80712 | 0.819871 | 9.25E-53 | -1.69E-46 |
| MS.gene051720 | MS.gene80712 | 0.831921 | 1.27E-55 | -1.69E-46 |
| MS.gene051744 | MS.gene80712 | 0.846172 | 2.57E-59 | -1.69E-46 |
| MS.gene051957 | MS.gene80712 | 0.803271 | 3.78E-49 | -1.69E-46 |
| MS.gene052108 | MS.gene80712 | 0.804989 | 1.66E-49 | -1.69E-46 |
| MS.gene052384 | MS.gene80712 | 0.802341 | 5.87E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene80712 | 0.815296 | 9.94E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene80712 | 0.802353 | 5.84E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene80712 | 0.826082 | 3.30E-54 | -1.69E-46 |
| MS.gene052534 | MS.gene80712 | 0.821757 | 3.41E-53 | -1.69E-46 |
| MS.gene052582 | MS.gene80712 | 0.853598 | 2.15E-61 | -1.69E-46 |
| MS.gene052584 | MS.gene80712 | 0.868413 | 6.65E-66 | -1.69E-46 |
| MS.gene052773 | MS.gene80712 | 0.833145 | 6.31E-56 | -1.69E-46 |
| MS.gene052863 | MS.gene80712 | 0.808689 | 2.74E-50 | -1.69E-46 |
| MS.gene052867 | MS.gene80712 | 0.801029 | 1.09E-48 | -1.69E-46 |
| MS.gene053079 | MS.gene80712 | 0.823547 | 1.31E-53 | -1.69E-46 |
| MS.gene05308 | MS.gene80712 | 0.824642 | 7.23E-54 | -1.69E-46 |
| MS.gene053122 | MS.gene80712 | 0.814888 | 1.22E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene80712 | 0.874507 | 6.40E-68 | -1.69E-46 |
| MS.gene05364 | MS.gene80712 | 0.840238 | 9.81E-58 | -1.69E-46 |
| MS.gene054139 | MS.gene80712 | 0.81962 | 1.06E-52 | -1.69E-46 |
| MS.gene05415 | MS.gene80712 | 0.828218 | 1.02E-54 | -1.69E-46 |
| MS.gene05423 | MS.gene80712 | 0.845151 | 4.86E-59 | -1.69E-46 |
| MS.gene054479 | MS.gene80712 | 0.800393 | 1.47E-48 | -1.69E-46 |
| MS.gene054576 | MS.gene80712 | 0.823113 | 1.65E-53 | -1.69E-46 |
| MS.gene05458 | MS.gene80712 | 0.84194 | 3.50E-58 | -1.69E-46 |
| MS.gene054651 | MS.gene80712 | 0.851981 | 6.23E-61 | -1.69E-46 |
| MS.gene054775 | MS.gene80712 | 0.826889 | 2.12E-54 | -1.69E-46 |
| MS.gene054991 | MS.gene80712 | 0.830174 | 3.41E-55 | -1.69E-46 |
| MS.gene055166 | MS.gene80712 | 0.808712 | 2.71E-50 | -1.69E-46 |
| MS.gene05517 | MS.gene80712 | 0.812821 | 3.50E-51 | -1.69E-46 |
| MS.gene055228 | MS.gene80712 | 0.803896 | 2.80E-49 | -1.69E-46 |
| MS.gene055313 | MS.gene80712 | 0.800762 | 1.24E-48 | -1.69E-46 |
| MS.gene055465 | MS.gene80712 | 0.807009 | 6.23E-50 | -1.69E-46 |
| MS.gene055466 | MS.gene80712 | 0.817551 | 3.11E-52 | -1.69E-46 |
| MS.gene055468 | MS.gene80712 | 0.805993 | 1.02E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene80712 | 0.823969 | 1.04E-53 | -1.69E-46 |
| MS.gene055586 | MS.gene80712 | 0.800018 | 1.75E-48 | -1.69E-46 |
| MS.gene055589 | MS.gene80712 | 0.80935 | 1.98E-50 | -1.69E-46 |
| MS.gene055623 | MS.gene80712 | 0.808474 | 3.04E-50 | -1.69E-46 |
| MS.gene055694 | MS.gene80712 | 0.833053 | 6.65E-56 | -1.69E-46 |
| MS.gene055778 | MS.gene80712 | 0.834059 | 3.73E-56 | -1.69E-46 |
| MS.gene055818 | MS.gene80712 | 0.827928 | 1.19E-54 | -1.69E-46 |
| MS.gene055841 | MS.gene80712 | 0.814914 | 1.21E-51 | -1.69E-46 |
| MS.gene055926 | MS.gene80712 | 0.807216 | 5.63E-50 | -1.69E-46 |
| MS.gene05604 | MS.gene80712 | 0.809719 | 1.65E-50 | -1.69E-46 |
| MS.gene056050 | MS.gene80712 | 0.837753 | 4.31E-57 | -1.69E-46 |
| MS.gene056162 | MS.gene80712 | 0.850347 | 1.80E-60 | -1.69E-46 |
| MS.gene056174 | MS.gene80712 | 0.807593 | 4.69E-50 | -1.69E-46 |
| MS.gene056215 | MS.gene80712 | 0.819266 | 1.27E-52 | -1.69E-46 |
| MS.gene056308 | MS.gene80712 | 0.830648 | 2.61E-55 | -1.69E-46 |
| MS.gene056366 | MS.gene80712 | 0.837495 | 5.03E-57 | -1.69E-46 |
| MS.gene056507 | MS.gene80712 | 0.804898 | 1.73E-49 | -1.69E-46 |
| MS.gene056595 | MS.gene80712 | 0.832081 | 1.16E-55 | -1.69E-46 |
| MS.gene056776 | MS.gene80712 | 0.825393 | 4.80E-54 | -1.69E-46 |
| MS.gene05686 | MS.gene80712 | 0.827566 | 1.46E-54 | -1.69E-46 |
| MS.gene05689 | MS.gene80712 | 0.809392 | 1.94E-50 | -1.69E-46 |
| MS.gene05690 | MS.gene80712 | 0.822262 | 2.60E-53 | -1.69E-46 |
| MS.gene057026 | MS.gene80712 | 0.802931 | 4.44E-49 | -1.69E-46 |
| MS.gene057027 | MS.gene80712 | 0.804012 | 2.65E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene80712 | 0.811002 | 8.71E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene80712 | 0.816555 | 5.20E-52 | -1.69E-46 |
| MS.gene057208 | MS.gene80712 | 0.846019 | 2.82E-59 | -1.69E-46 |
| MS.gene057414 | MS.gene80712 | 0.817399 | 3.36E-52 | -1.69E-46 |
| MS.gene057598 | MS.gene80712 | 0.807505 | 4.89E-50 | -1.69E-46 |
| MS.gene057611 | MS.gene80712 | 0.816366 | 5.74E-52 | -1.69E-46 |
| MS.gene057693 | MS.gene80712 | 0.808775 | 2.62E-50 | -1.69E-46 |
| MS.gene057869 | MS.gene80712 | 0.80073 | 1.26E-48 | -1.69E-46 |
| MS.gene057915 | MS.gene80712 | 0.82055 | 6.47E-53 | -1.69E-46 |
| MS.gene058037 | MS.gene80712 | 0.807956 | 3.92E-50 | -1.69E-46 |
| MS.gene05847 | MS.gene80712 | 0.807559 | 4.76E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene80712 | 0.862086 | 6.50E-64 | -1.69E-46 |
| MS.gene058829 | MS.gene80712 | 0.824446 | 8.04E-54 | -1.69E-46 |
| MS.gene058979 | MS.gene80712 | 0.818402 | 2.00E-52 | -1.69E-46 |
| MS.gene05897 | MS.gene80712 | 0.807793 | 4.25E-50 | -1.69E-46 |
| MS.gene05954 | MS.gene80712 | 0.810664 | 1.03E-50 | -1.69E-46 |
| MS.gene059625 | MS.gene80712 | 0.853482 | 2.32E-61 | -1.69E-46 |
| MS.gene059725 | MS.gene80712 | 0.809138 | 2.19E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene80712 | 0.806592 | 7.63E-50 | -1.69E-46 |
| MS.gene05985 | MS.gene80712 | -0.819747 | 9.87E-53 | -1.69E-46 |
| MS.gene059935 | MS.gene80712 | 0.808187 | 3.50E-50 | -1.69E-46 |
| MS.gene060365 | MS.gene80712 | 0.856213 | 3.75E-62 | -1.69E-46 |
| MS.gene060429 | MS.gene80712 | 0.802035 | 6.79E-49 | -1.69E-46 |
| MS.gene060521 | MS.gene80712 | 0.822354 | 2.48E-53 | -1.69E-46 |
| MS.gene06052 | MS.gene80712 | 0.801865 | 7.36E-49 | -1.69E-46 |
| MS.gene060572 | MS.gene80712 | 0.81173 | 6.05E-51 | -1.69E-46 |
| MS.gene060587 | MS.gene80712 | 0.816711 | 4.80E-52 | -1.69E-46 |
| MS.gene060634 | MS.gene80712 | -0.808893 | 2.48E-50 | -1.69E-46 |
| MS.gene060933 | MS.gene80712 | 0.80846 | 3.06E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene80712 | 0.819837 | 9.42E-53 | -1.69E-46 |
| MS.gene060937 | MS.gene80712 | 0.823025 | 1.73E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80712.t1 | MTR_5g095400 | 57.071 | 198 | 69 | 4 | 14 | 195 | 2 | 199 | 7.17e-52 | 186 |
| MS.gene80712.t1 | MTR_5g095370 | 52.804 | 214 | 72 | 5 | 1 | 187 | 1 | 212 | 6.13e-50 | 172 |
| MS.gene80712.t1 | MTR_5g095430 | 54.000 | 200 | 70 | 5 | 22 | 199 | 1 | 200 | 1.66e-45 | 168 |
| MS.gene80712.t1 | MTR_5g034000 | 60.902 | 133 | 38 | 3 | 62 | 194 | 4 | 122 | 4.20e-37 | 134 |
| MS.gene80712.t1 | MTR_5g095310 | 65.179 | 112 | 31 | 1 | 22 | 125 | 1 | 112 | 3.02e-34 | 133 |
| MS.gene80712.t1 | MTR_5g094850 | 42.262 | 168 | 74 | 2 | 4 | 148 | 2 | 169 | 9.75e-26 | 111 |
| MS.gene80712.t1 | MTR_5g094850 | 42.262 | 168 | 74 | 2 | 4 | 148 | 2 | 169 | 9.87e-26 | 110 |
| MS.gene80712.t1 | MTR_5g095360 | 65.517 | 87 | 21 | 2 | 48 | 125 | 1 | 87 | 3.29e-24 | 98.6 |
| MS.gene80712.t1 | MTR_5g094960 | 39.326 | 178 | 99 | 4 | 1 | 169 | 1 | 178 | 6.41e-19 | 90.1 |
| MS.gene80712.t1 | MTR_5g094950 | 35.749 | 207 | 92 | 7 | 1 | 174 | 1 | 199 | 9.83e-19 | 90.1 |
| MS.gene80712.t1 | MTR_5g094990 | 46.296 | 108 | 50 | 3 | 1 | 101 | 1 | 107 | 8.09e-17 | 83.6 |
| MS.gene80712.t1 | MTR_5g095390 | 42.484 | 153 | 53 | 5 | 5 | 133 | 3 | 144 | 1.25e-16 | 82.0 |
| MS.gene80712.t1 | MTR_5g094920 | 37.975 | 158 | 94 | 3 | 1 | 155 | 1 | 157 | 1.72e-16 | 82.8 |
| MS.gene80712.t1 | MTR_5g095050 | 33.166 | 199 | 93 | 4 | 1 | 159 | 1 | 199 | 8.10e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80712.t1 | AT3G05850 | 35.938 | 128 | 79 | 2 | 406 | 531 | 206 | 332 | 3.92e-16 | 82.4 |
| MS.gene80712.t1 | AT1G06740 | 25.681 | 257 | 168 | 9 | 293 | 542 | 54 | 294 | 6.77e-15 | 78.6 |
Find 97 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAGACCCAGGTTCGGTTTC+GGG | 0.153720 | 5.4:-23985812 | None:intergenic |
| ATACCCGCATAACTCATATT+TGG | 0.224107 | 5.4:-23990831 | None:intergenic |
| TCCTGATCGGTACTCCTATT+TGG | 0.236061 | 5.4:+23990026 | MS.gene80712:CDS |
| AAACATGAGCATTCAAGATT+TGG | 0.255671 | 5.4:+23985859 | MS.gene80712:CDS |
| TTTCCTTTGATACCTCTATT+AGG | 0.262376 | 5.4:-23990480 | None:intergenic |
| GAAGTTAAGAAAACTAGTTT+AGG | 0.304656 | 5.4:+23986079 | MS.gene80712:CDS |
| ACGAGACCCAGGTTCGGTTT+CGG | 0.309512 | 5.4:-23985813 | None:intergenic |
| AAGTTAAGAAAACTAGTTTA+GGG | 0.326960 | 5.4:+23986080 | MS.gene80712:CDS |
| AACTCACTAAGTATAATATC+AGG | 0.335954 | 5.4:-23990270 | None:intergenic |
| ATCAATAATGGACTCAATAA+TGG | 0.336122 | 5.4:+23990078 | MS.gene80712:CDS |
| TCGGTACTCCTATTTGGATT+TGG | 0.336972 | 5.4:+23990032 | MS.gene80712:CDS |
| CTAGAAGTTGGTCTATTGTT+TGG | 0.346137 | 5.4:+23990537 | MS.gene80712:CDS |
| ATCTTATATGTTATCCCATC+TGG | 0.354321 | 5.4:-23990705 | None:intergenic |
| GAAGTTGGAAAGCAAGTTAA+AGG | 0.356001 | 5.4:+23990803 | MS.gene80712:CDS |
| GAAGATGTTGATTCTCTGTT+TGG | 0.361541 | 5.4:-23985961 | None:intergenic |
| AGTGGATTGGCTATCAATAA+TGG | 0.373898 | 5.4:+23990066 | MS.gene80712:CDS |
| AGAAAAGAAGAACAATGATT+TGG | 0.374109 | 5.4:+23986126 | MS.gene80712:CDS |
| AAGAGGGGTTTGAGATTAAG+AGG | 0.381353 | 5.4:+23990604 | MS.gene80712:CDS |
| AGTGAGGCTAGGGTTGATAC+TGG | 0.395761 | 5.4:+23986253 | MS.gene80712:CDS |
| GTCATCAACCAAATCCAAAT+AGG | 0.396507 | 5.4:-23990040 | None:intergenic |
| TCAACAGAAGTTTCAATTTG+AGG | 0.397293 | 5.4:+23985982 | MS.gene80712:CDS |
| AATAAACCCGAAACCGAACC+TGG | 0.404728 | 5.4:+23985806 | MS.gene80712:CDS |
| CAAGAGCTGTTGGATAACTA+TGG | 0.418865 | 5.4:+23990858 | MS.gene80712:CDS |
| GGTGATCAAGGTGCATCATT+AGG | 0.424389 | 5.4:+23986367 | MS.gene80712:CDS |
| AAATGTACACATCCCATGTT+AGG | 0.435203 | 5.4:-23989955 | None:intergenic |
| TCCAAATAGGAGTACCGATC+AGG | 0.438387 | 5.4:-23990027 | None:intergenic |
| ATATCTGCTCATGAATTTGA+AGG | 0.439074 | 5.4:+23990504 | MS.gene80712:CDS |
| TAAAGTTGACCTACATTACT+TGG | 0.445820 | 5.4:-23990888 | None:intergenic |
| TGGGGTGAAAATTAGTGAGT+TGG | 0.449163 | 5.4:+23986210 | MS.gene80712:CDS |
| ACTCAAATGCCACATCTACT+TGG | 0.459803 | 5.4:+23990772 | MS.gene80712:CDS |
| TTCAATTTGAGGAAGAATTG+AGG | 0.460770 | 5.4:+23985993 | MS.gene80712:CDS |
| GATTTGGTTGATGACATTAG+TGG | 0.467108 | 5.4:+23990048 | MS.gene80712:CDS |
| CATGGGATGTGTACATTTGT+TGG | 0.467845 | 5.4:+23989960 | MS.gene80712:CDS |
| TTAGTGAGTTTGATGATGAA+TGG | 0.469717 | 5.4:+23990283 | MS.gene80712:CDS |
| AACGTGCGACGTGGCTCGGA+TGG | 0.474912 | 5.4:+23991084 | MS.gene80712:CDS |
| GAAGAACAATGATTTGGTGT+TGG | 0.478137 | 5.4:+23986132 | MS.gene80712:CDS |
| AAAGAGGAAATGTGTGAGAG+AGG | 0.479885 | 5.4:+23986019 | MS.gene80712:CDS |
| TACTTGGATTGCAAGGAAGT+TGG | 0.479955 | 5.4:+23990788 | MS.gene80712:CDS |
| AAGAGGAAATGTGTGAGAGA+GGG | 0.485749 | 5.4:+23986020 | MS.gene80712:CDS |
| GTTTGAACGAGACCCAGGTT+CGG | 0.492231 | 5.4:-23985819 | None:intergenic |
| GGTGAAAATTAGTGAGTTGG+AGG | 0.492346 | 5.4:+23986213 | MS.gene80712:CDS |
| TGGCTATGGTACACCTAACA+TGG | 0.495098 | 5.4:+23989942 | MS.gene80712:CDS |
| ATAAATTGACACTTTAACTT+CGG | 0.498881 | 5.4:-23990457 | None:intergenic |
| GCTAAACGTGCGACGTGGCT+CGG | 0.499279 | 5.4:+23991080 | MS.gene80712:CDS |
| GAAAGTGATGAAATTCTCTC+AGG | 0.500322 | 5.4:+23990333 | MS.gene80712:CDS |
| GTGTCAATTTATCCTAATAG+AGG | 0.512081 | 5.4:+23990468 | MS.gene80712:CDS |
| CATGCATCTCCTGCACCAGA+TGG | 0.517694 | 5.4:+23990690 | MS.gene80712:CDS |
| GGTTGATGACATTAGTGGAT+TGG | 0.519201 | 5.4:+23990053 | MS.gene80712:CDS |
| AGTGGGATGACAGAAAGAAA+TGG | 0.519842 | 5.4:-23990115 | None:intergenic |
| AAAAGGAGGAAGGGTGATCA+AGG | 0.524536 | 5.4:+23986355 | MS.gene80712:CDS |
| TGTTGAAAGTTGATCCTGAT+CGG | 0.525860 | 5.4:+23990013 | MS.gene80712:CDS |
| GAATTGAACCTCCCATGAAA+AGG | 0.526968 | 5.4:+23986338 | MS.gene80712:CDS |
| TATGTTATCCCATCTGGTGC+AGG | 0.528276 | 5.4:-23990699 | None:intergenic |
| GTGCTGCAGATGGTTGTTGT+TGG | 0.531203 | 5.4:+23990661 | MS.gene80712:CDS |
| GGCATAGAACCAAGTAATGT+AGG | 0.532485 | 5.4:+23990879 | MS.gene80712:CDS |
| AGAGATTGGGAATGAGATTG+TGG | 0.534715 | 5.4:+23986297 | MS.gene80712:CDS |
| GAAGAAGATCAGTGAGGCTA+GGG | 0.542048 | 5.4:+23986243 | MS.gene80712:CDS |
| GTGAATTGTTGACTTACTAG+TGG | 0.542926 | 5.4:-23990133 | None:intergenic |
| TGAAGAAGATCAGTGAGGCT+AGG | 0.548942 | 5.4:+23986242 | MS.gene80712:CDS |
| GGAAGAATTGAGGAAGAAAG+AGG | 0.549439 | 5.4:+23986003 | MS.gene80712:CDS |
| TGGTCGTTTGAACGAGACCC+AGG | 0.550224 | 5.4:-23985824 | None:intergenic |
| GGGAAAGTGAAACTAGAAGT+TGG | 0.554485 | 5.4:+23990525 | MS.gene80712:CDS |
| GGAGGTTCAATTCTTTGCAA+AGG | 0.554500 | 5.4:-23986328 | None:intergenic |
| ACGTGCGACGTGGCTCGGAT+GGG | 0.554509 | 5.4:+23991085 | MS.gene80712:CDS |
| GATCCAAATATGAGTTATGC+GGG | 0.556800 | 5.4:+23990828 | MS.gene80712:CDS |
| TATCCTAATAGAGGTATCAA+AGG | 0.564025 | 5.4:+23990477 | MS.gene80712:CDS |
| ACCTCCCATGAAAAGGAGGA+AGG | 0.564040 | 5.4:+23986345 | MS.gene80712:CDS |
| TAAGTAATGTTGTATAAACA+TGG | 0.567349 | 5.4:-23990215 | None:intergenic |
| TATCTGCTCATGAATTTGAA+GGG | 0.578816 | 5.4:+23990505 | MS.gene80712:CDS |
| CCACATCTACTTGGATTGCA+AGG | 0.580563 | 5.4:+23990781 | MS.gene80712:CDS |
| TATAGAAGAGAGCTCACAAG+TGG | 0.587113 | 5.4:+23989912 | MS.gene80712:intron |
| ATGCATCTCCTGCACCAGAT+GGG | 0.589805 | 5.4:+23990691 | MS.gene80712:CDS |
| GTGAGGCTAGGGTTGATACT+GGG | 0.593342 | 5.4:+23986254 | MS.gene80712:CDS |
| ACTCACTAAGTATAATATCA+GGG | 0.594109 | 5.4:-23990269 | None:intergenic |
| CCTCCCATGAAAAGGAGGAA+GGG | 0.594242 | 5.4:+23986346 | MS.gene80712:CDS |
| CATCTCAAGAACATGACTAT+CGG | 0.607263 | 5.4:-23990163 | None:intergenic |
| CAAGTGGAGAACAATGGCTA+TGG | 0.609468 | 5.4:+23989928 | MS.gene80712:CDS |
| CCTTGCAATCCAAGTAGATG+TGG | 0.615060 | 5.4:-23990781 | None:intergenic |
| GTTCGTGTACAAGAATGACC+TGG | 0.619017 | 5.4:-23990741 | None:intergenic |
| TTGAACCTCCCATGAAAAGG+AGG | 0.626318 | 5.4:+23986341 | MS.gene80712:CDS |
| ACTGCTAGATGTGCTGCAGA+TGG | 0.631118 | 5.4:+23990651 | MS.gene80712:CDS |
| TTCAAACGACCATATGAACA+TGG | 0.632439 | 5.4:+23985835 | MS.gene80712:CDS |
| GGGTATGAAACAAGAGCTGT+TGG | 0.632928 | 5.4:+23990848 | MS.gene80712:CDS |
| AATAATGGACTCAATAATGG+AGG | 0.634814 | 5.4:+23990081 | MS.gene80712:CDS |
| TGATCCAAATATGAGTTATG+CGG | 0.636992 | 5.4:+23990827 | MS.gene80712:CDS |
| ATAAACCCGAAACCGAACCT+GGG | 0.644214 | 5.4:+23985807 | MS.gene80712:CDS |
| TACAACATTACTTAATCACG+AGG | 0.647600 | 5.4:+23990224 | MS.gene80712:CDS |
| TTCGTGTACAAGAATGACCT+GGG | 0.654913 | 5.4:-23990740 | None:intergenic |
| GGCTATGGTACACCTAACAT+GGG | 0.658576 | 5.4:+23989943 | MS.gene80712:CDS |
| TGAATTGTTGACTTACTAGT+GGG | 0.663929 | 5.4:-23990132 | None:intergenic |
| GAGATTAACATTGATGAGCA+TGG | 0.664972 | 5.4:+23990390 | MS.gene80712:CDS |
| GATGATGAATGGAGAGTGAG+TGG | 0.667600 | 5.4:+23990294 | MS.gene80712:CDS |
| AAGATTAAGTCATACAACCC+AGG | 0.678278 | 5.4:+23990723 | MS.gene80712:CDS |
| AGCTCACAAGTGGAGAACAA+TGG | 0.680339 | 5.4:+23989922 | MS.gene80712:CDS |
| GATTGGGAATGAGATTGTGG+AGG | 0.716006 | 5.4:+23986300 | MS.gene80712:CDS |
| ACAACATTACTTAATCACGA+GGG | 0.719512 | 5.4:+23990225 | MS.gene80712:CDS |
| ATCAATGAAGAAGATCAGTG+AGG | 0.753954 | 5.4:+23986237 | MS.gene80712:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATGATTTAATTAATATTA+AGG | + | chr5.4:23987679-23987698 | MS.gene80712:intron | 10.0% |
| !! | TAAAAAAAAAGAATATCTTA+TGG | + | chr5.4:23989192-23989211 | MS.gene80712:intron | 10.0% |
| !!! | TACTTTTCTTTTTTTAATTA+CGG | - | chr5.4:23988248-23988267 | None:intergenic | 10.0% |
| !!! | TTTAAAGAATTTAAAATTCT+AGG | - | chr5.4:23988503-23988522 | None:intergenic | 10.0% |
| !! | ACAATTTAAGTGAAATTTAA+CGG | + | chr5.4:23986668-23986687 | MS.gene80712:intron | 15.0% |
| !! | AGAAAAAAAACTGAAATATA+AGG | - | chr5.4:23988313-23988332 | None:intergenic | 15.0% |
| !! | AGAAAAATAATTTACTTCAT+GGG | + | chr5.4:23986962-23986981 | MS.gene80712:intron | 15.0% |
| !! | TTTGCAATTTATATCAAAAT+GGG | + | chr5.4:23989636-23989655 | MS.gene80712:intron | 15.0% |
| !!! | AATTAAATCATTGATTTCTT+AGG | - | chr5.4:23987672-23987691 | None:intergenic | 15.0% |
| !!! | ACTTTTCTTTTTTTAATTAC+GGG | - | chr5.4:23988247-23988266 | None:intergenic | 15.0% |
| !!! | AGAGAAAACAATATATTTTT+TGG | - | chr5.4:23987491-23987510 | None:intergenic | 15.0% |
| !!! | TAAGTTATGATTTGTAATTA+AGG | - | chr5.4:23987286-23987305 | None:intergenic | 15.0% |
| !!! | TTTTGCAATTTATATCAAAA+TGG | + | chr5.4:23989635-23989654 | MS.gene80712:intron | 15.0% |
| !! | AAGAAATAAAAATGAGCATA+TGG | - | chr5.4:23988898-23988917 | None:intergenic | 20.0% |
| !! | AATTCCAATCAATTTATGTA+AGG | + | chr5.4:23987762-23987781 | MS.gene80712:intron | 20.0% |
| !! | ATACTCAAATCATAAACAAA+AGG | - | chr5.4:23989237-23989256 | None:intergenic | 20.0% |
| !! | ATCATTAGGTATGAAAATTA+TGG | + | chr5.4:23986381-23986400 | MS.gene80712:intron | 20.0% |
| !! | CAATTTGATATATGAATTCA+TGG | - | chr5.4:23986999-23987018 | None:intergenic | 20.0% |
| !! | GAAGAAATGTAATATTATGA+GGG | + | chr5.4:23988452-23988471 | MS.gene80712:intron | 20.0% |
| !! | GAGAAAAATAATTTACTTCA+TGG | + | chr5.4:23986961-23986980 | MS.gene80712:intron | 20.0% |
| !! | TAAGGAATTACTATTTCAAT+GGG | + | chr5.4:23987697-23987716 | MS.gene80712:intron | 20.0% |
| !! | TAAGTAATGTTGTATAAACA+TGG | - | chr5.4:23990218-23990237 | None:intergenic | 20.0% |
| !! | TCTTACAGTTATATATACTT+TGG | + | chr5.4:23988551-23988570 | MS.gene80712:intron | 20.0% |
| !! | TGAAAATTCAATAACCAATT+CGG | + | chr5.4:23987723-23987742 | MS.gene80712:intron | 20.0% |
| !! | TGAAGAAATGTAATATTATG+AGG | + | chr5.4:23988451-23988470 | MS.gene80712:intron | 20.0% |
| !! | TTAAGGAATTACTATTTCAA+TGG | + | chr5.4:23987696-23987715 | MS.gene80712:intron | 20.0% |
| !! | TTACATAGATGAAGAAAAAA+GGG | + | chr5.4:23990362-23990381 | MS.gene80712:CDS | 20.0% |
| !! | TTGAATTCAATACAAATGAT+AGG | + | chr5.4:23986817-23986836 | MS.gene80712:intron | 20.0% |
| !!! | AAGTTAAGAAAACTAGTTTA+GGG | + | chr5.4:23986080-23986099 | MS.gene80712:CDS | 20.0% |
| !!! | AATAAATAAGAGCATATACA+TGG | - | chr5.4:23989108-23989127 | None:intergenic | 20.0% |
| !!! | AATTAAGAATTTTAGAAGCA+TGG | - | chr5.4:23989068-23989087 | None:intergenic | 20.0% |
| !!! | ACAGTTTCTTTTATTCTATT+AGG | + | chr5.4:23989847-23989866 | MS.gene80712:intron | 20.0% |
| !!! | ATAAATTGACACTTTAACTT+CGG | - | chr5.4:23990460-23990479 | None:intergenic | 20.0% |
| !!! | ATTTTGTAAGAGAGTAAATT+GGG | + | chr5.4:23986744-23986763 | MS.gene80712:intron | 20.0% |
| !!! | ATTTTTTGGTAGAGTATAAA+AGG | - | chr5.4:23987477-23987496 | None:intergenic | 20.0% |
| !!! | GTATAATAGTAGTTCTTTTA+GGG | + | chr5.4:23988078-23988097 | MS.gene80712:intron | 20.0% |
| !!! | TAAAAGTGTATATAAGCATA+TGG | - | chr5.4:23988959-23988978 | None:intergenic | 20.0% |
| !!! | TATTTTGTAAGAGAGTAAAT+TGG | + | chr5.4:23986743-23986762 | MS.gene80712:intron | 20.0% |
| !!! | TGTATAATAGTAGTTCTTTT+AGG | + | chr5.4:23988077-23988096 | MS.gene80712:intron | 20.0% |
| !!! | TTAATGCTTGTTCTTATTTA+AGG | + | chr5.4:23987643-23987662 | MS.gene80712:intron | 20.0% |
| ! | AAAATTGTTAGGGACTAATT+TGG | + | chr5.4:23986714-23986733 | MS.gene80712:intron | 25.0% |
| ! | AAATTGTTAGGGACTAATTT+GGG | + | chr5.4:23986715-23986734 | MS.gene80712:intron | 25.0% |
| ! | AACATAAACTCATTTAGCAT+TGG | + | chr5.4:23987211-23987230 | MS.gene80712:intron | 25.0% |
| ! | AACTCACTAAGTATAATATC+AGG | - | chr5.4:23990273-23990292 | None:intergenic | 25.0% |
| ! | AATCATGATTAAGATGTCAA+GGG | + | chr5.4:23987881-23987900 | MS.gene80712:intron | 25.0% |
| ! | ACAATATTAGTTATCACCTA+AGG | - | chr5.4:23986633-23986652 | None:intergenic | 25.0% |
| ! | ACAATGCTAATCTAATCAAT+AGG | - | chr5.4:23988637-23988656 | None:intergenic | 25.0% |
| ! | ACATAAACTCATTTAGCATT+GGG | + | chr5.4:23987212-23987231 | MS.gene80712:intron | 25.0% |
| ! | ACTCACTAAGTATAATATCA+GGG | - | chr5.4:23990272-23990291 | None:intergenic | 25.0% |
| ! | AGAAAAGAAGAACAATGATT+TGG | + | chr5.4:23986126-23986145 | MS.gene80712:CDS | 25.0% |
| ! | AGGAAATGTTAGATTTGAAA+TGG | + | chr5.4:23989273-23989292 | MS.gene80712:intron | 25.0% |
| ! | ATATACATGGTTAGTACAAA+AGG | - | chr5.4:23989095-23989114 | None:intergenic | 25.0% |
| ! | ATATATCCAAGCATCTTATA+TGG | + | chr5.4:23989464-23989483 | MS.gene80712:intron | 25.0% |
| ! | ATTTAAGTGAAATTTAACGG+AGG | + | chr5.4:23986671-23986690 | MS.gene80712:intron | 25.0% |
| ! | CAATATTAGTTATCACCTAA+GGG | - | chr5.4:23986632-23986651 | None:intergenic | 25.0% |
| ! | GTTACATAGATGAAGAAAAA+AGG | + | chr5.4:23990361-23990380 | MS.gene80712:CDS | 25.0% |
| ! | TAAGAGGATAAAAAACGAAA+AGG | + | chr5.4:23990620-23990639 | MS.gene80712:CDS | 25.0% |
| ! | TAATGCTTTGATAGATTTCT+AGG | + | chr5.4:23986842-23986861 | MS.gene80712:intron | 25.0% |
| ! | TCAACCTTACATAAATTGAT+TGG | - | chr5.4:23987769-23987788 | None:intergenic | 25.0% |
| ! | TGAATAACAAATCTAACAAG+AGG | + | chr5.4:23989694-23989713 | MS.gene80712:intron | 25.0% |
| ! | TTATGTCCTATTGAAATCAA+TGG | + | chr5.4:23987091-23987110 | MS.gene80712:intron | 25.0% |
| ! | TTCTTAGTAGTTAACATTCA+TGG | - | chr5.4:23986929-23986948 | None:intergenic | 25.0% |
| ! | TTTAAGTGAAATTTAACGGA+GGG | + | chr5.4:23986672-23986691 | MS.gene80712:intron | 25.0% |
| !! | ATTTCATCACTTTCATTTTG+AGG | - | chr5.4:23990327-23990346 | None:intergenic | 25.0% |
| !! | GAAGTTAAGAAAACTAGTTT+AGG | + | chr5.4:23986079-23986098 | MS.gene80712:CDS | 25.0% |
| !!! | AGAGATTTTGTTATACAAGA+GGG | + | chr5.4:23990588-23990607 | MS.gene80712:CDS | 25.0% |
| !!! | ATCAATAATGGACTCAATAA+TGG | + | chr5.4:23990078-23990097 | MS.gene80712:CDS | 25.0% |
| !!! | TAGAGATTTTGTTATACAAG+AGG | + | chr5.4:23990587-23990606 | MS.gene80712:CDS | 25.0% |
| !!! | TCTTGTTAGATTTGTTATTC+AGG | - | chr5.4:23989695-23989714 | None:intergenic | 25.0% |
| !!! | TTTTTAGGATTACAAGGATT+TGG | + | chr5.4:23988804-23988823 | MS.gene80712:intron | 25.0% |
| AAAAAAACACCGAAAACAAC+AGG | - | chr5.4:23988789-23988808 | None:intergenic | 30.0% | |
| AAAAGCTGTCAAAAATGACA+AGG | - | chr5.4:23989776-23989795 | None:intergenic | 30.0% | |
| AAACATGAGCATTCAAGATT+TGG | + | chr5.4:23985859-23985878 | MS.gene80712:CDS | 30.0% | |
| AAGAAACTGTTAACAATGAC+AGG | - | chr5.4:23989837-23989856 | None:intergenic | 30.0% | |
| ACAACATTACTTAATCACGA+GGG | + | chr5.4:23990225-23990244 | MS.gene80712:CDS | 30.0% | |
| ACAATTGTCAGAGACTAATT+TGG | - | chr5.4:23986544-23986563 | None:intergenic | 30.0% | |
| ACTGAAATATAAGGTGTGTT+TGG | - | chr5.4:23988304-23988323 | None:intergenic | 30.0% | |
| ACTTTATCGTGCAAGAAAAA+AGG | + | chr5.4:23990905-23990924 | MS.gene80712:CDS | 30.0% | |
| AGAAACTGTTAACAATGACA+GGG | - | chr5.4:23989836-23989855 | None:intergenic | 30.0% | |
| AGAACGAGAAAAATGCATTT+GGG | + | chr5.4:23986191-23986210 | MS.gene80712:CDS | 30.0% | |
| ATATCTGCTCATGAATTTGA+AGG | + | chr5.4:23990504-23990523 | MS.gene80712:CDS | 30.0% | |
| ATCATGATTCATGACACAAT+TGG | - | chr5.4:23987870-23987889 | None:intergenic | 30.0% | |
| ATCTTATATGTTATCCCATC+TGG | - | chr5.4:23990708-23990727 | None:intergenic | 30.0% | |
| ATTAAAAGCTCTCTTGCATA+AGG | - | chr5.4:23987252-23987271 | None:intergenic | 30.0% | |
| ATTGATGCTCTATACTCATT+TGG | + | chr5.4:23987609-23987628 | MS.gene80712:intron | 30.0% | |
| CTGTTGAAGAAAAAGAGATT+GGG | + | chr5.4:23986284-23986303 | MS.gene80712:CDS | 30.0% | |
| GAATCATGATTAAGATGTCA+AGG | + | chr5.4:23987880-23987899 | MS.gene80712:intron | 30.0% | |
| GAATGGGAACAGTTATTTAA+AGG | + | chr5.4:23987953-23987972 | MS.gene80712:intron | 30.0% | |
| GAGAGATAAAACTAAGATAC+AGG | + | chr5.4:23990978-23990997 | MS.gene80712:intron | 30.0% | |
| GAGGGAATTCAAATACTTTA+AGG | + | chr5.4:23988389-23988408 | MS.gene80712:intron | 30.0% | |
| GTAGGGAAAAATAATCTCTT+GGG | + | chr5.4:23989330-23989349 | MS.gene80712:intron | 30.0% | |
| GTGTCAATTTATCCTAATAG+AGG | + | chr5.4:23990468-23990487 | MS.gene80712:CDS | 30.0% | |
| GTTCCTTAATGATAAGTGTT+GGG | - | chr5.4:23987411-23987430 | None:intergenic | 30.0% | |
| TAAAGTTGACCTACATTACT+TGG | - | chr5.4:23990891-23990910 | None:intergenic | 30.0% | |
| TACAACATTACTTAATCACG+AGG | + | chr5.4:23990224-23990243 | MS.gene80712:CDS | 30.0% | |
| TAGGGAAAAATAATCTCTTG+GGG | + | chr5.4:23989331-23989350 | MS.gene80712:intron | 30.0% | |
| TATCTGCTCATGAATTTGAA+GGG | + | chr5.4:23990505-23990524 | MS.gene80712:CDS | 30.0% | |
| TCAACAGAAGTTTCAATTTG+AGG | + | chr5.4:23985982-23986001 | MS.gene80712:CDS | 30.0% | |
| TCTCTTACTTGAGTATCTTA+TGG | + | chr5.4:23989161-23989180 | MS.gene80712:intron | 30.0% | |
| TGATCCAAATATGAGTTATG+CGG | + | chr5.4:23990827-23990846 | MS.gene80712:CDS | 30.0% | |
| TGTGTTTGGATGAAGTAATT+TGG | - | chr5.4:23988530-23988549 | None:intergenic | 30.0% | |
| TGTTCTATTGTGTTCTTTGT+AGG | - | chr5.4:23988583-23988602 | None:intergenic | 30.0% | |
| TTAAGGTGAATTCCATTGTT+TGG | + | chr5.4:23988406-23988425 | MS.gene80712:intron | 30.0% | |
| TTCAATTTGAGGAAGAATTG+AGG | + | chr5.4:23985993-23986012 | MS.gene80712:CDS | 30.0% | |
| TTCCCTGTGTAAAATTGTTA+GGG | + | chr5.4:23986704-23986723 | MS.gene80712:intron | 30.0% | |
| TTTCCTTTGATACCTCTATT+AGG | - | chr5.4:23990483-23990502 | None:intergenic | 30.0% | |
| ! | ATGTCTTTGTTTGTTTGATG+TGG | + | chr5.4:23988980-23988999 | MS.gene80712:intron | 30.0% |
| ! | GGAAGAAATATGTCATGTTT+TGG | + | chr5.4:23988032-23988051 | MS.gene80712:intron | 30.0% |
| ! | GTATTTGTCACTGTATTGAT+AGG | + | chr5.4:23989253-23989272 | MS.gene80712:intron | 30.0% |
| ! | TATAACTGTAAGAGTGTGTT+TGG | - | chr5.4:23988544-23988563 | None:intergenic | 30.0% |
| ! | TCATGTTTTCCATGTTCATA+TGG | - | chr5.4:23985847-23985866 | None:intergenic | 30.0% |
| ! | TGTCTTTGTTTGTTTGATGT+GGG | + | chr5.4:23988981-23989000 | MS.gene80712:intron | 30.0% |
| ! | TGTGTTTGGATTTAGAGTTT+AGG | - | chr5.4:23988290-23988309 | None:intergenic | 30.0% |
| ! | TGTTTTATACTCCTCATTGT+TGG | + | chr5.4:23988609-23988628 | MS.gene80712:intron | 30.0% |
| ! | TTCCTTAATGATAAGTGTTG+GGG | - | chr5.4:23987410-23987429 | None:intergenic | 30.0% |
| ! | TTTGGATTTAGAGTTTAGGA+GGG | - | chr5.4:23988286-23988305 | None:intergenic | 30.0% |
| !! | AATAATGGACTCAATAATGG+AGG | + | chr5.4:23990081-23990100 | MS.gene80712:CDS | 30.0% |
| !! | ACACAAAGATGCTTACTTTT+TGG | - | chr5.4:23987447-23987466 | None:intergenic | 30.0% |
| !! | ACTTTTTGGTAACACAAAGA+TGG | - | chr5.4:23987433-23987452 | None:intergenic | 30.0% |
| !! | ATTGGACCATTGATTTCAAT+AGG | - | chr5.4:23987100-23987119 | None:intergenic | 30.0% |
| !! | CTTTTTAAGCAGTAAGCTTA+GGG | + | chr5.4:23988011-23988030 | MS.gene80712:intron | 30.0% |
| !! | GAGATTTTGTTATACAAGAG+GGG | + | chr5.4:23990589-23990608 | MS.gene80712:CDS | 30.0% |
| !! | TATCCTAATAGAGGTATCAA+AGG | + | chr5.4:23990477-23990496 | MS.gene80712:CDS | 30.0% |
| !! | TCTTTTTAAGCAGTAAGCTT+AGG | + | chr5.4:23988010-23988029 | MS.gene80712:intron | 30.0% |
| !! | TGAATTGTTGACTTACTAGT+GGG | - | chr5.4:23990135-23990154 | None:intergenic | 30.0% |
| !! | TTAGTGAGTTTGATGATGAA+TGG | + | chr5.4:23990283-23990302 | MS.gene80712:CDS | 30.0% |
| !!! | GGTGTTTTTTTAGGATTACA+AGG | + | chr5.4:23988798-23988817 | MS.gene80712:intron | 30.0% |
| !!! | GGTTTCTAAGGTATTTTACA+TGG | + | chr5.4:23989383-23989402 | MS.gene80712:intron | 30.0% |
| !!! | GTATCTTAGTTTTATCTCTC+TGG | - | chr5.4:23990978-23990997 | None:intergenic | 30.0% |
| !!! | GTTGTTTTCGGTGTTTTTTT+AGG | + | chr5.4:23988789-23988808 | MS.gene80712:intron | 30.0% |
| !!! | TAGAAAAAGAGTTGGTGTTT+TGG | + | chr5.4:23986168-23986187 | MS.gene80712:CDS | 30.0% |
| !!! | TTTCTTGTTCCTGTTGTTTT+CGG | + | chr5.4:23988777-23988796 | MS.gene80712:intron | 30.0% |
| AAAGGTTAATGAGAGAAGAG+AGG | + | chr5.4:23987971-23987990 | MS.gene80712:intron | 35.0% | |
| AAATCTAACAAGAGGTAGAG+AGG | + | chr5.4:23989702-23989721 | MS.gene80712:intron | 35.0% | |
| AAATGTACACATCCCATGTT+AGG | - | chr5.4:23989958-23989977 | None:intergenic | 35.0% | |
| AACAGGACAACAACATTGAT+TGG | - | chr5.4:23987529-23987548 | None:intergenic | 35.0% | |
| AAGATTAAGTCATACAACCC+AGG | + | chr5.4:23990723-23990742 | MS.gene80712:CDS | 35.0% | |
| AAGGTTAATGAGAGAAGAGA+GGG | + | chr5.4:23987972-23987991 | MS.gene80712:intron | 35.0% | |
| AATCAACACACGAATGAAAC+AGG | - | chr5.4:23987546-23987565 | None:intergenic | 35.0% | |
| ACTGAGCTCATGTTATCTTT+AGG | + | chr5.4:23989031-23989050 | MS.gene80712:intron | 35.0% | |
| AGATTGTCAGGGGTTAATTT+GGG | + | chr5.4:23986772-23986791 | MS.gene80712:intron | 35.0% | |
| AGGTTATTCTAGCAATCTGT+TGG | - | chr5.4:23989675-23989694 | None:intergenic | 35.0% | |
| ATACCCGCATAACTCATATT+TGG | - | chr5.4:23990834-23990853 | None:intergenic | 35.0% | |
| ATCAATAGGAACCAACAATG+AGG | - | chr5.4:23988623-23988642 | None:intergenic | 35.0% | |
| ATCAATGAAGAAGATCAGTG+AGG | + | chr5.4:23986237-23986256 | MS.gene80712:CDS | 35.0% | |
| ATCCCCAACACTTATCATTA+AGG | + | chr5.4:23987405-23987424 | MS.gene80712:intron | 35.0% | |
| ATGATTAAGATGTCAAGGGT+TGG | + | chr5.4:23987885-23987904 | MS.gene80712:intron | 35.0% | |
| CATCTCAAGAACATGACTAT+CGG | - | chr5.4:23990166-23990185 | None:intergenic | 35.0% | |
| CATGATTTCATCTTCCGAAT+TGG | - | chr5.4:23987740-23987759 | None:intergenic | 35.0% | |
| CTGTATAAAGACAAGGTGTA+GGG | + | chr5.4:23986894-23986913 | MS.gene80712:intron | 35.0% | |
| CTTGGGGAAAAAAAAATCCA+GGG | + | chr5.4:23989347-23989366 | MS.gene80712:intron | 35.0% | |
| GAAAGTGATGAAATTCTCTC+AGG | + | chr5.4:23990333-23990352 | MS.gene80712:CDS | 35.0% | |
| GAACGAGAAAAATGCATTTG+GGG | + | chr5.4:23986192-23986211 | MS.gene80712:CDS | 35.0% | |
| GAAGTTGGAAAGCAAGTTAA+AGG | + | chr5.4:23990803-23990822 | MS.gene80712:CDS | 35.0% | |
| GAATCGCGTTCAAATTGTTA+GGG | - | chr5.4:23986482-23986501 | None:intergenic | 35.0% | |
| GAGAACGAGAAAAATGCATT+TGG | + | chr5.4:23986190-23986209 | MS.gene80712:CDS | 35.0% | |
| GAGATTAACATTGATGAGCA+TGG | + | chr5.4:23990390-23990409 | MS.gene80712:CDS | 35.0% | |
| GAGGGAATGTAATGTTATGA+GGG | + | chr5.4:23988371-23988390 | MS.gene80712:intron | 35.0% | |
| GAGGGAATTCAAATACTTTG+AGG | + | chr5.4:23988470-23988489 | MS.gene80712:intron | 35.0% | |
| GATCCAAATATGAGTTATGC+GGG | + | chr5.4:23990828-23990847 | MS.gene80712:CDS | 35.0% | |
| GCTGTTGAAGAAAAAGAGAT+TGG | + | chr5.4:23986283-23986302 | MS.gene80712:CDS | 35.0% | |
| GGTAGGGAAAAATAATCTCT+TGG | + | chr5.4:23989329-23989348 | MS.gene80712:intron | 35.0% | |
| GGTTCCTTAATGATAAGTGT+TGG | - | chr5.4:23987412-23987431 | None:intergenic | 35.0% | |
| GTCATCAACCAAATCCAAAT+AGG | - | chr5.4:23990043-23990062 | None:intergenic | 35.0% | |
| GTGAATTCCATTGTTTGGAT+GGG | + | chr5.4:23988411-23988430 | MS.gene80712:intron | 35.0% | |
| GTTCCCTGTGTAAAATTGTT+AGG | + | chr5.4:23986703-23986722 | MS.gene80712:intron | 35.0% | |
| TCTAATTCGATGATGAGTGA+TGG | - | chr5.4:23987167-23987186 | None:intergenic | 35.0% | |
| TCTGAGCTTAGAAAAAGAGT+TGG | + | chr5.4:23986160-23986179 | MS.gene80712:CDS | 35.0% | |
| TCTTGGGGAAAAAAAAATCC+AGG | + | chr5.4:23989346-23989365 | MS.gene80712:intron | 35.0% | |
| TGAATCGCGTTCAAATTGTT+AGG | - | chr5.4:23986483-23986502 | None:intergenic | 35.0% | |
| TGAATTCCATTGTTTGGATG+GGG | + | chr5.4:23988412-23988431 | MS.gene80712:intron | 35.0% | |
| TGAGGGAATGTAATGTTATG+AGG | + | chr5.4:23988370-23988389 | MS.gene80712:intron | 35.0% | |
| TTCAAACGACCATATGAACA+TGG | + | chr5.4:23985835-23985854 | MS.gene80712:CDS | 35.0% | |
| TTGAGTATGAAAACTCCTCT+AGG | - | chr5.4:23987811-23987830 | None:intergenic | 35.0% | |
| TTTCCTGCTGTATAAAGACA+AGG | + | chr5.4:23986887-23986906 | MS.gene80712:intron | 35.0% | |
| ! | AAATCAAGAGTGTGTTTGGA+TGG | + | chr5.4:23988337-23988356 | MS.gene80712:intron | 35.0% |
| ! | AATCAAGAGTGTGTTTGGAT+GGG | + | chr5.4:23988338-23988357 | MS.gene80712:intron | 35.0% |
| ! | AATGGTCCAATTTGTTCAAC+TGG | + | chr5.4:23987109-23987128 | MS.gene80712:intron | 35.0% |
| ! | AGTCCCTAACAATTTTACAC+AGG | - | chr5.4:23986710-23986729 | None:intergenic | 35.0% |
| ! | ATGATTTAAAACACGCCCTT+AGG | + | chr5.4:23986614-23986633 | MS.gene80712:intron | 35.0% |
| ! | ATTTCTAGACTAGAGAAGCA+TGG | - | chr5.4:23987585-23987604 | None:intergenic | 35.0% |
| ! | CATTTAGCATTGGGTTGTTA+TGG | + | chr5.4:23987221-23987240 | MS.gene80712:intron | 35.0% |
| ! | CTAGAAGTTGGTCTATTGTT+TGG | + | chr5.4:23990537-23990556 | MS.gene80712:CDS | 35.0% |
| ! | GTCCCTAACAATTTTACACA+GGG | - | chr5.4:23986709-23986728 | None:intergenic | 35.0% |
| ! | GTTTGGATTTAGAGTTTAGG+AGG | - | chr5.4:23988287-23988306 | None:intergenic | 35.0% |
| ! | TCCAAAATCAAGAGTGTGTT+TGG | + | chr5.4:23988333-23988352 | MS.gene80712:intron | 35.0% |
| ! | TCCAAACACACTCTTGATTT+TGG | - | chr5.4:23988337-23988356 | None:intergenic | 35.0% |
| ! | TGTTGAAAGTTGATCCTGAT+CGG | + | chr5.4:23990013-23990032 | MS.gene80712:CDS | 35.0% |
| ! | TTGGATTTAGAGTTTAGGAG+GGG | - | chr5.4:23988285-23988304 | None:intergenic | 35.0% |
| ! | TTTCTAGACTAGAGAAGCAT+GGG | - | chr5.4:23987584-23987603 | None:intergenic | 35.0% |
| !! | ACGCGATTCAATTTTGTTTC+TGG | + | chr5.4:23986493-23986512 | MS.gene80712:intron | 35.0% |
| !! | AGTGGATTGGCTATCAATAA+TGG | + | chr5.4:23990066-23990085 | MS.gene80712:CDS | 35.0% |
| !! | CATTTGTTGGTGCATTTTGA+TGG | + | chr5.4:23989973-23989992 | MS.gene80712:CDS | 35.0% |
| !! | GAAGAACAATGATTTGGTGT+TGG | + | chr5.4:23986132-23986151 | MS.gene80712:CDS | 35.0% |
| !! | GAAGATGTTGATTCTCTGTT+TGG | - | chr5.4:23985964-23985983 | None:intergenic | 35.0% |
| !! | GATTTGGTTGATGACATTAG+TGG | + | chr5.4:23990048-23990067 | MS.gene80712:CDS | 35.0% |
| !! | GTGAATTGTTGACTTACTAG+TGG | - | chr5.4:23990136-23990155 | None:intergenic | 35.0% |
| !! | TAATGATAAGTGTTGGGGAT+GGG | - | chr5.4:23987405-23987424 | None:intergenic | 35.0% |
| !! | TATGAAAACTCCTCTAGGAT+AGG | - | chr5.4:23987806-23987825 | None:intergenic | 35.0% |
| !! | TCATCACTTTCATTTTGAGG+AGG | - | chr5.4:23990324-23990343 | None:intergenic | 35.0% |
| !! | TTAATGATAAGTGTTGGGGA+TGG | - | chr5.4:23987406-23987425 | None:intergenic | 35.0% |
| !!! | CATGTTTTGGAGCTTTTATG+AGG | + | chr5.4:23988045-23988064 | MS.gene80712:intron | 35.0% |
| !!! | GGTATTTTACATGGTGCTAT+TGG | + | chr5.4:23989392-23989411 | MS.gene80712:intron | 35.0% |
| !!! | GTAGTTCTTTTAGGGTGTTT+TGG | + | chr5.4:23988086-23988105 | MS.gene80712:intron | 35.0% |
| !!! | TTCTTTTAGGGTGTTTTGGA+TGG | + | chr5.4:23988090-23988109 | MS.gene80712:intron | 35.0% |
| AAAGAGGAAATGTGTGAGAG+AGG | + | chr5.4:23986019-23986038 | MS.gene80712:CDS | 40.0% | |
| AAAGCTCTCTTGCATAAGGA+AGG | - | chr5.4:23987248-23987267 | None:intergenic | 40.0% | |
| AAGAGGAAATGTGTGAGAGA+GGG | + | chr5.4:23986020-23986039 | MS.gene80712:CDS | 40.0% | |
| AATCATACATGTCGCAGAGA+AGG | - | chr5.4:23986600-23986619 | None:intergenic | 40.0% | |
| AATGACCATTCCTATCCTAG+AGG | + | chr5.4:23987793-23987812 | MS.gene80712:intron | 40.0% | |
| ACACCTTGTCTTTATACAGC+AGG | - | chr5.4:23986893-23986912 | None:intergenic | 40.0% | |
| ACTCAAATGCCACATCTACT+TGG | + | chr5.4:23990772-23990791 | MS.gene80712:CDS | 40.0% | |
| AGAGATTGGGAATGAGATTG+TGG | + | chr5.4:23986297-23986316 | MS.gene80712:CDS | 40.0% | |
| AGTGGGATGACAGAAAGAAA+TGG | - | chr5.4:23990118-23990137 | None:intergenic | 40.0% | |
| CAAGAGCTGTTGGATAACTA+TGG | + | chr5.4:23990858-23990877 | MS.gene80712:CDS | 40.0% | |
| CAAGCACCAGTTGAACAAAT+TGG | - | chr5.4:23987118-23987137 | None:intergenic | 40.0% | |
| CAGATTGTCAGGGGTTAATT+TGG | + | chr5.4:23986771-23986790 | MS.gene80712:intron | 40.0% | |
| CAGCAGGAAAATCACATTCT+CGG | - | chr5.4:23986877-23986896 | None:intergenic | 40.0% | |
| CATGGGATGTGTACATTTGT+TGG | + | chr5.4:23989960-23989979 | MS.gene80712:CDS | 40.0% | |
| GAATTCCATTGTTTGGATGG+GGG | + | chr5.4:23988413-23988432 | MS.gene80712:intron | 40.0% | |
| GAATTGAACCTCCCATGAAA+AGG | + | chr5.4:23986338-23986357 | MS.gene80712:CDS | 40.0% | |
| GCTGTATAAAGACAAGGTGT+AGG | + | chr5.4:23986893-23986912 | MS.gene80712:intron | 40.0% | |
| GGAAGAATTGAGGAAGAAAG+AGG | + | chr5.4:23986003-23986022 | MS.gene80712:CDS | 40.0% | |
| GGAGGTTCAATTCTTTGCAA+AGG | - | chr5.4:23986331-23986350 | None:intergenic | 40.0% | |
| GGCATAGAACCAAGTAATGT+AGG | + | chr5.4:23990879-23990898 | MS.gene80712:CDS | 40.0% | |
| GGCATATCTGATGGTTTCTA+AGG | + | chr5.4:23989371-23989390 | MS.gene80712:intron | 40.0% | |
| GGGAAAGTGAAACTAGAAGT+TGG | + | chr5.4:23990525-23990544 | MS.gene80712:CDS | 40.0% | |
| GGTCTACAATCTGTTCTCTA+GGG | - | chr5.4:23987849-23987868 | None:intergenic | 40.0% | |
| GGTGAATTCCATTGTTTGGA+TGG | + | chr5.4:23988410-23988429 | MS.gene80712:intron | 40.0% | |
| TACTCAAGTAAGAGACAGCT+TGG | - | chr5.4:23989156-23989175 | None:intergenic | 40.0% | |
| TACTTGGATTGCAAGGAAGT+TGG | + | chr5.4:23990788-23990807 | MS.gene80712:CDS | 40.0% | |
| TATAGAAGAGAGCTCACAAG+TGG | + | chr5.4:23989912-23989931 | MS.gene80712:intron | 40.0% | |
| TCGGTACTCCTATTTGGATT+TGG | + | chr5.4:23990032-23990051 | MS.gene80712:CDS | 40.0% | |
| TGGGGTGAAAATTAGTGAGT+TGG | + | chr5.4:23986210-23986229 | MS.gene80712:CDS | 40.0% | |
| TGGTCTACAATCTGTTCTCT+AGG | - | chr5.4:23987850-23987869 | None:intergenic | 40.0% | |
| TTAAGATGTCAAGGGTTGGA+AGG | + | chr5.4:23987889-23987908 | MS.gene80712:intron | 40.0% | |
| TTCGTGTACAAGAATGACCT+GGG | - | chr5.4:23990743-23990762 | None:intergenic | 40.0% | |
| ! | AACTTCGGCAGAATTTTCAG+AGG | - | chr5.4:23990445-23990464 | None:intergenic | 40.0% |
| ! | AAGAGGGGTTTGAGATTAAG+AGG | + | chr5.4:23990604-23990623 | MS.gene80712:CDS | 40.0% |
| ! | ATATATGATGACGACGACGA+TGG | - | chr5.4:23989450-23989469 | None:intergenic | 40.0% |
| ! | ATCAAGAGTGTGTTTGGATG+GGG | + | chr5.4:23988339-23988358 | MS.gene80712:intron | 40.0% |
| ! | GGTGAAAATTAGTGAGTTGG+AGG | + | chr5.4:23986213-23986232 | MS.gene80712:CDS | 40.0% |
| ! | TCAAGCTTCAAGTTTGCGAA+AGG | + | chr5.4:23989743-23989762 | MS.gene80712:intron | 40.0% |
| !! | AAACTCCTCTAGGATAGGAA+TGG | - | chr5.4:23987801-23987820 | None:intergenic | 40.0% |
| !! | GGTTGATGACATTAGTGGAT+TGG | + | chr5.4:23990053-23990072 | MS.gene80712:CDS | 40.0% |
| !! | TTTAGGGTGTTTTGGATGGA+GGG | + | chr5.4:23988094-23988113 | MS.gene80712:intron | 40.0% |
| !!! | TTTTAGGGTGTTTTGGATGG+AGG | + | chr5.4:23988093-23988112 | MS.gene80712:intron | 40.0% |
| AAAAAGCTAAACGTGCGACG+TGG | + | chr5.4:23991075-23991094 | MS.gene80712:CDS | 45.0% | |
| AAAAGGAGGAAGGGTGATCA+AGG | + | chr5.4:23986355-23986374 | MS.gene80712:CDS | 45.0% | |
| AATAAACCCGAAACCGAACC+TGG | + | chr5.4:23985806-23985825 | MS.gene80712:CDS | 45.0% | |
| AATTGGGAGCTCAGATTGTC+AGG | + | chr5.4:23986760-23986779 | MS.gene80712:intron | 45.0% | |
| ACATTCCCCCATCCAAACAA+TGG | - | chr5.4:23988421-23988440 | None:intergenic | 45.0% | |
| ACCCTCAATGATAAAGGGGT+AGG | + | chr5.4:23989312-23989331 | MS.gene80712:intron | 45.0% | |
| AGCTCACAAGTGGAGAACAA+TGG | + | chr5.4:23989922-23989941 | MS.gene80712:CDS | 45.0% | |
| AGCTCCACCCTCAATGATAA+AGG | + | chr5.4:23989306-23989325 | MS.gene80712:intron | 45.0% | |
| AGGCTCGAGAAAATGGTTGA+AGG | + | chr5.4:23987923-23987942 | MS.gene80712:intron | 45.0% | |
| ATAAACCCGAAACCGAACCT+GGG | + | chr5.4:23985807-23985826 | MS.gene80712:CDS | 45.0% | |
| ATTGGGAGCTCAGATTGTCA+GGG | + | chr5.4:23986761-23986780 | MS.gene80712:intron | 45.0% | |
| CAAGTGGAGAACAATGGCTA+TGG | + | chr5.4:23989928-23989947 | MS.gene80712:CDS | 45.0% | |
| CACAAGAAGGCTCGAGAAAA+TGG | + | chr5.4:23987916-23987935 | MS.gene80712:intron | 45.0% | |
| CAGACGCCATATAAGATGCT+TGG | - | chr5.4:23989473-23989492 | None:intergenic | 45.0% | |
| CCACATCTACTTGGATTGCA+AGG | + | chr5.4:23990781-23990800 | MS.gene80712:CDS | 45.0% | |
| CCCTACCCCTTTATCATTGA+GGG | - | chr5.4:23989316-23989335 | None:intergenic | 45.0% | |
| CCCTCAATGATAAAGGGGTA+GGG | + | chr5.4:23989313-23989332 | MS.gene80712:intron | 45.0% | |
| CCTTGCAATCCAAGTAGATG+TGG | - | chr5.4:23990784-23990803 | None:intergenic | 45.0% | |
| CTCCACCCTCAATGATAAAG+GGG | + | chr5.4:23989308-23989327 | MS.gene80712:intron | 45.0% | |
| GAAGAAGATCAGTGAGGCTA+GGG | + | chr5.4:23986243-23986262 | MS.gene80712:CDS | 45.0% | |
| GATGATGAATGGAGAGTGAG+TGG | + | chr5.4:23990294-23990313 | MS.gene80712:CDS | 45.0% | |
| GATTGGGAATGAGATTGTGG+AGG | + | chr5.4:23986300-23986319 | MS.gene80712:CDS | 45.0% | |
| GCTCAGTTGTGATTCTATGC+AGG | - | chr5.4:23989018-23989037 | None:intergenic | 45.0% | |
| GCTCCACCCTCAATGATAAA+GGG | + | chr5.4:23989307-23989326 | MS.gene80712:intron | 45.0% | |
| GGCTATGGTACACCTAACAT+GGG | + | chr5.4:23989943-23989962 | MS.gene80712:CDS | 45.0% | |
| GGGGAAAAAAAAATCCAGGG+AGG | + | chr5.4:23989350-23989369 | MS.gene80712:intron | 45.0% | |
| GGGTATGAAACAAGAGCTGT+TGG | + | chr5.4:23990848-23990867 | MS.gene80712:CDS | 45.0% | |
| GGTGATCAAGGTGCATCATT+AGG | + | chr5.4:23986367-23986386 | MS.gene80712:CDS | 45.0% | |
| GTTCGTGTACAAGAATGACC+TGG | - | chr5.4:23990744-23990763 | None:intergenic | 45.0% | |
| TACCCCTTTATCATTGAGGG+TGG | - | chr5.4:23989313-23989332 | None:intergenic | 45.0% | |
| TATGTTATCCCATCTGGTGC+AGG | - | chr5.4:23990702-23990721 | None:intergenic | 45.0% | |
| TCCCTACCCCTTTATCATTG+AGG | - | chr5.4:23989317-23989336 | None:intergenic | 45.0% | |
| TCCTGATCGGTACTCCTATT+TGG | + | chr5.4:23990026-23990045 | MS.gene80712:CDS | 45.0% | |
| TCTCAACTTCTCTCTGCTGT+GGG | + | chr5.4:23987055-23987074 | MS.gene80712:intron | 45.0% | |
| TGAAGAAGATCAGTGAGGCT+AGG | + | chr5.4:23986242-23986261 | MS.gene80712:CDS | 45.0% | |
| TGGCTATGGTACACCTAACA+TGG | + | chr5.4:23989942-23989961 | MS.gene80712:CDS | 45.0% | |
| TTCTCAACTTCTCTCTGCTG+TGG | + | chr5.4:23987054-23987073 | MS.gene80712:intron | 45.0% | |
| TTGAACCTCCCATGAAAAGG+AGG | + | chr5.4:23986341-23986360 | MS.gene80712:CDS | 45.0% | |
| ! | ATCACCCTTCCTCCTTTTCA+TGG | - | chr5.4:23986353-23986372 | None:intergenic | 45.0% |
| ! | GGTTGAAGGTGCACTTGAAT+GGG | + | chr5.4:23987937-23987956 | MS.gene80712:intron | 45.0% |
| ! | GTTGGAAGGTACACACAAGA+AGG | + | chr5.4:23987903-23987922 | MS.gene80712:intron | 45.0% |
| ! | TCAAGAGTGTGTTTGGATGG+GGG | + | chr5.4:23988340-23988359 | MS.gene80712:intron | 45.0% |
| ! | TCACCCTTCCTCCTTTTCAT+GGG | - | chr5.4:23986352-23986371 | None:intergenic | 45.0% |
| ! | TGGTTGAAGGTGCACTTGAA+TGG | + | chr5.4:23987936-23987955 | MS.gene80712:intron | 45.0% |
| ! | TTGGATGGGGGAATGTTTTG+AGG | + | chr5.4:23988352-23988371 | MS.gene80712:intron | 45.0% |
| !! | TCCAAATAGGAGTACCGATC+AGG | - | chr5.4:23990030-23990049 | None:intergenic | 45.0% |
| !! | TGGATGGGGGAATGTTTTGA+GGG | + | chr5.4:23988353-23988372 | MS.gene80712:intron | 45.0% |
| AACCATCAGATATGCCTCCC+TGG | - | chr5.4:23989367-23989386 | None:intergenic | 50.0% | |
| ACCTCCCATGAAAAGGAGGA+AGG | + | chr5.4:23986345-23986364 | MS.gene80712:CDS | 50.0% | |
| ACTGCTAGATGTGCTGCAGA+TGG | + | chr5.4:23990651-23990670 | MS.gene80712:CDS | 50.0% | |
| AGAGTTTAGGAGGGGCAAAG+AGG | - | chr5.4:23988277-23988296 | None:intergenic | 50.0% | |
| ATGCATCTCCTGCACCAGAT+GGG | + | chr5.4:23990691-23990710 | MS.gene80712:CDS | 50.0% | |
| CATTATTCCCACAGATCCCC+TGG | + | chr5.4:23986568-23986587 | MS.gene80712:intron | 50.0% | |
| CCTCCCATGAAAAGGAGGAA+GGG | + | chr5.4:23986346-23986365 | MS.gene80712:CDS | 50.0% | |
| GTGCTGCAGATGGTTGTTGT+TGG | + | chr5.4:23990661-23990680 | MS.gene80712:CDS | 50.0% | |
| GTTTGAACGAGACCCAGGTT+CGG | - | chr5.4:23985822-23985841 | None:intergenic | 50.0% | |
| TTGGGAGCTCAGATTGTCAG+GGG | + | chr5.4:23986762-23986781 | MS.gene80712:intron | 50.0% | |
| TTTAGGAGGGGCAAAGAGGA+GGG | - | chr5.4:23988273-23988292 | None:intergenic | 50.0% | |
| ! | ATCCAGGGAGGCATATCTGA+TGG | + | chr5.4:23989362-23989381 | MS.gene80712:intron | 50.0% |
| !! | AGTGAGGCTAGGGTTGATAC+TGG | + | chr5.4:23986253-23986272 | MS.gene80712:CDS | 50.0% |
| !! | GTGAGGCTAGGGTTGATACT+GGG | + | chr5.4:23986254-23986273 | MS.gene80712:CDS | 50.0% |
| CATGCATCTCCTGCACCAGA+TGG | + | chr5.4:23990690-23990709 | MS.gene80712:CDS | 55.0% | |
| GTTTAGGAGGGGCAAAGAGG+AGG | - | chr5.4:23988274-23988293 | None:intergenic | 55.0% | |
| TGGTCGTTTGAACGAGACCC+AGG | - | chr5.4:23985827-23985846 | None:intergenic | 55.0% | |
| ! | ACGAGACCCAGGTTCGGTTT+CGG | - | chr5.4:23985816-23985835 | None:intergenic | 55.0% |
| ! | CCCTTCCTCCTTTTCATGGG+AGG | - | chr5.4:23986349-23986368 | None:intergenic | 55.0% |
| CGCAGAGAAGGCAGCAACCA+GGG | - | chr5.4:23986588-23986607 | None:intergenic | 60.0% | |
| GCAGAGAAGGCAGCAACCAG+GGG | - | chr5.4:23986587-23986606 | None:intergenic | 60.0% | |
| GCAGCAACCAGGGGATCTGT+GGG | - | chr5.4:23986578-23986597 | None:intergenic | 60.0% | |
| GCTAAACGTGCGACGTGGCT+CGG | + | chr5.4:23991080-23991099 | MS.gene80712:CDS | 60.0% | |
| TCGCAGAGAAGGCAGCAACC+AGG | - | chr5.4:23986589-23986608 | None:intergenic | 60.0% | |
| ! | CGAGACCCAGGTTCGGTTTC+GGG | - | chr5.4:23985815-23985834 | None:intergenic | 60.0% |
| GGCAGCAACCAGGGGATCTG+TGG | - | chr5.4:23986579-23986598 | None:intergenic | 65.0% | |
| ! | AACGTGCGACGTGGCTCGGA+TGG | + | chr5.4:23991084-23991103 | MS.gene80712:CDS | 65.0% |
| ! | ACGTGCGACGTGGCTCGGAT+GGG | + | chr5.4:23991085-23991104 | MS.gene80712:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 23985800 | 23991146 | 23985800 | ID=MS.gene80712 |
| chr5.4 | mRNA | 23985800 | 23991146 | 23985800 | ID=MS.gene80712.t1;Parent=MS.gene80712 |
| chr5.4 | exon | 23985800 | 23986388 | 23985800 | ID=MS.gene80712.t1.exon1;Parent=MS.gene80712.t1 |
| chr5.4 | CDS | 23985800 | 23986388 | 23985800 | ID=cds.MS.gene80712.t1;Parent=MS.gene80712.t1 |
| chr5.4 | exon | 23989917 | 23990926 | 23989917 | ID=MS.gene80712.t1.exon2;Parent=MS.gene80712.t1 |
| chr5.4 | CDS | 23989917 | 23990926 | 23989917 | ID=cds.MS.gene80712.t1;Parent=MS.gene80712.t1 |
| chr5.4 | exon | 23991075 | 23991146 | 23991075 | ID=MS.gene80712.t1.exon3;Parent=MS.gene80712.t1 |
| chr5.4 | CDS | 23991075 | 23991146 | 23991075 | ID=cds.MS.gene80712.t1;Parent=MS.gene80712.t1 |
| Gene Sequence |
| Protein sequence |
