Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043622.01.T01 | XP_003627843.1 | 91.716 | 169 | 14 | 0 | 1 | 169 | 24 | 192 | 1.05E-112 | 328 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043622.01.T01 | Q9LK88 | 75 | 168 | 42 | 0 | 1 | 168 | 29 | 196 | 1.14E-87 | 258 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043622.01.T01 | B7FMX0 | 91.716 | 169 | 14 | 0 | 1 | 169 | 24 | 192 | 5.01e-113 | 328 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048506.01 | MsG0880043622.01 | -0.802274 | 6.063148e-49 | 2.957698e-46 |
| MsG0080048507.01 | MsG0880043622.01 | -0.812204 | 4.767624e-51 | 3.012347e-48 |
| MsG0080048727.01 | MsG0880043622.01 | 0.804600 | 1.998097e-49 | 1.034540e-46 |
| MsG0080048748.01 | MsG0880043622.01 | 0.848501 | 5.888779e-60 | 1.083006e-56 |
| MsG0080048849.01 | MsG0880043622.01 | 0.802721 | 4.905199e-49 | 2.420263e-46 |
| MsG0080048938.01 | MsG0880043622.01 | 0.814063 | 1.864265e-51 | 1.238268e-48 |
| MsG0080049069.01 | MsG0880043622.01 | 0.820257 | 7.547860e-53 | 5.942384e-50 |
| MsG0080049070.01 | MsG0880043622.01 | 0.841940 | 3.503325e-58 | 5.228964e-55 |
| MsG0180000017.01 | MsG0880043622.01 | 0.808553 | 2.926798e-50 | 1.678509e-47 |
| MsG0180000129.01 | MsG0880043622.01 | 0.805269 | 1.447983e-49 | 7.627347e-47 |
| MsG0180000489.01 | MsG0880043622.01 | 0.878322 | 3.085202e-69 | 1.603913e-65 |
| MsG0180000490.01 | MsG0880043622.01 | 0.819417 | 1.174423e-52 | 9.032224e-50 |
| MsG0180000491.01 | MsG0880043622.01 | 0.858785 | 6.488699e-63 | 1.675561e-59 |
| MsG0180000549.01 | MsG0880043622.01 | 0.830673 | 2.572220e-55 | 2.728910e-52 |
| MsG0180000599.01 | MsG0880043622.01 | 0.840266 | 9.644237e-58 | 1.366416e-54 |
| MsG0180000843.01 | MsG0880043622.01 | 0.827213 | 1.771050e-54 | 1.698653e-51 |
| MsG0180000942.01 | MsG0880043622.01 | 0.851985 | 6.212683e-61 | 1.279264e-57 |
| MsG0180001091.01 | MsG0880043622.01 | 0.821316 | 4.307908e-53 | 3.492827e-50 |
| MsG0180001548.01 | MsG0880043622.01 | 0.832878 | 7.352823e-56 | 8.326839e-53 |
| MsG0180001704.01 | MsG0880043622.01 | 0.819645 | 1.041937e-52 | 8.064256e-50 |
| MsG0180002700.01 | MsG0880043622.01 | 0.864407 | 1.243313e-64 | 3.899529e-61 |
| MsG0180002891.01 | MsG0880043622.01 | 0.811384 | 7.193648e-51 | 4.446436e-48 |
| MsG0180003748.01 | MsG0880043622.01 | 0.805856 | 1.090712e-49 | 5.833030e-47 |
| MsG0180004017.01 | MsG0880043622.01 | 0.826278 | 2.960890e-54 | 2.764236e-51 |
| MsG0180004103.01 | MsG0880043622.01 | 0.805998 | 1.018039e-49 | 5.464325e-47 |
| MsG0180004106.01 | MsG0880043622.01 | 0.808158 | 3.554149e-50 | 2.017321e-47 |
| MsG0180004518.01 | MsG0880043622.01 | 0.804965 | 1.677041e-49 | 8.765588e-47 |
| MsG0180004934.01 | MsG0880043622.01 | 0.814268 | 1.680175e-51 | 1.122208e-48 |
| MsG0180004988.01 | MsG0880043622.01 | 0.838435 | 2.881457e-57 | 3.859228e-54 |
| MsG0180005339.01 | MsG0880043622.01 | 0.836425 | 9.427475e-57 | 1.187636e-53 |
| MsG0180005416.01 | MsG0880043622.01 | 0.824409 | 8.197268e-54 | 7.254249e-51 |
| MsG0180005918.01 | MsG0880043622.01 | -0.808413 | 3.134950e-50 | 1.791339e-47 |
| MsG0180006136.01 | MsG0880043622.01 | 0.821606 | 3.692977e-53 | 3.018488e-50 |
| MsG0280006370.01 | MsG0880043622.01 | 0.826130 | 3.211684e-54 | 2.985679e-51 |
| MsG0280006400.01 | MsG0880043622.01 | 0.836224 | 1.060443e-56 | 1.328037e-53 |
| MsG0780040213.01 | MsG0880043622.01 | 0.821146 | 4.714890e-53 | 3.804872e-50 |
| MsG0780040235.01 | MsG0880043622.01 | 0.821366 | 4.194132e-53 | 3.405363e-50 |
| MsG0780040278.01 | MsG0880043622.01 | 0.833741 | 4.480202e-56 | 5.206462e-53 |
| MsG0780040965.01 | MsG0880043622.01 | 0.805336 | 1.402107e-49 | 7.398423e-47 |
| MsG0780041129.01 | MsG0880043622.01 | 0.833743 | 4.476085e-56 | 5.201900e-53 |
| MsG0780041272.01 | MsG0880043622.01 | 0.827838 | 1.254068e-54 | 1.224797e-51 |
| MsG0780041385.01 | MsG0880043622.01 | 0.816459 | 5.469826e-52 | 3.877840e-49 |
| MsG0780041778.01 | MsG0880043622.01 | 0.814326 | 1.631297e-51 | 1.091264e-48 |
| MsG0780041828.01 | MsG0880043622.01 | 0.834352 | 3.149411e-56 | 3.727913e-53 |
| MsG0880042000.01 | MsG0880043622.01 | 0.805000 | 1.648480e-49 | 8.623784e-47 |
| MsG0880042026.01 | MsG0880043622.01 | 0.822821 | 1.929053e-53 | 1.632383e-50 |
| MsG0880042044.01 | MsG0880043622.01 | 0.843436 | 1.402794e-58 | 2.194719e-55 |
| MsG0880042086.01 | MsG0880043622.01 | 0.864425 | 1.226942e-64 | 3.850936e-61 |
| MsG0880042256.01 | MsG0880043622.01 | 0.804659 | 1.943019e-49 | 1.007545e-46 |
| MsG0880042415.01 | MsG0880043622.01 | 0.840598 | 7.895727e-58 | 1.130234e-54 |
| MsG0880042416.01 | MsG0880043622.01 | 0.833283 | 5.830719e-56 | 6.683521e-53 |
| MsG0880043107.01 | MsG0880043622.01 | 0.872279 | 3.591760e-67 | 1.494145e-63 |
| MsG0880043235.01 | MsG0880043622.01 | 0.804768 | 1.843684e-49 | 9.587706e-47 |
| MsG0880043277.01 | MsG0880043622.01 | 0.802747 | 4.845441e-49 | 2.392342e-46 |
| MsG0880043278.01 | MsG0880043622.01 | 0.814134 | 1.798195e-51 | 1.196671e-48 |
| MsG0880043298.01 | MsG0880043622.01 | 0.806767 | 7.008913e-50 | 3.836441e-47 |
| MsG0880043622.01 | MsG0880043650.01 | 0.847920 | 8.521830e-60 | 1.538108e-56 |
| MsG0880043622.01 | MsG0880044487.01 | 0.817306 | 3.530615e-52 | 2.561849e-49 |
| MsG0880043622.01 | MsG0880044538.01 | 0.810530 | 1.101079e-50 | 6.653172e-48 |
| MsG0880043622.01 | MsG0880045402.01 | 0.852279 | 5.122207e-61 | 1.065051e-57 |
| MsG0880043622.01 | MsG0880045423.01 | 0.811583 | 6.509758e-51 | 4.044977e-48 |
| MsG0880043622.01 | MsG0880045722.01 | 0.818139 | 2.290222e-52 | 1.700242e-49 |
| MsG0880043622.01 | MsG0880046200.01 | 0.842014 | 3.348391e-58 | 5.009460e-55 |
| MsG0880043622.01 | MsG0880046334.01 | -0.809292 | 2.033255e-50 | 1.189188e-47 |
| MsG0880043622.01 | MsG0880046434.01 | -0.824965 | 6.063042e-54 | 5.452781e-51 |
| MsG0880043622.01 | MsG0880046533.01 | 0.830722 | 2.502487e-55 | 2.658766e-52 |
| MsG0880043622.01 | MsG0880046765.01 | 0.810999 | 8.716760e-51 | 5.334288e-48 |
| MsG0880043622.01 | MsG0880047112.01 | 0.839989 | 1.139152e-57 | 1.600370e-54 |
| MsG0880043622.01 | MsG0880047394.01 | 0.811457 | 6.933548e-51 | 4.294210e-48 |
| MsG0880043622.01 | MsG0880047481.01 | -0.821278 | 4.395237e-53 | 3.559774e-50 |
| MsG0880043622.01 | MsG0880047770.01 | 0.821950 | 3.074848e-53 | 2.537974e-50 |
| MsG0280011110.01 | MsG0880043622.01 | -0.851297 | 9.728194e-61 | 1.960233e-57 |
| MsG0280011180.01 | MsG0880043622.01 | 0.816243 | 6.113489e-52 | 4.308992e-49 |
| MsG0280011218.01 | MsG0880043622.01 | 0.812485 | 4.139679e-51 | 2.635470e-48 |
| MsG0280011255.01 | MsG0880043622.01 | 0.802593 | 5.212297e-49 | 2.563393e-46 |
| MsG0380011662.01 | MsG0880043622.01 | 0.810493 | 1.121692e-50 | 6.771126e-48 |
| MsG0380012567.01 | MsG0880043622.01 | 0.821058 | 4.940646e-53 | 3.977668e-50 |
| MsG0380012868.01 | MsG0880043622.01 | 0.842315 | 2.788123e-58 | 4.211140e-55 |
| MsG0380014386.01 | MsG0880043622.01 | 0.814807 | 1.276173e-51 | 8.648903e-49 |
| MsG0380014433.01 | MsG0880043622.01 | 0.803443 | 3.477563e-49 | 1.747781e-46 |
| MsG0380014517.01 | MsG0880043622.01 | 0.821377 | 4.169932e-53 | 3.386689e-50 |
| MsG0380014909.01 | MsG0880043622.01 | 0.840769 | 7.121273e-58 | 1.024859e-54 |
| MsG0680030858.01 | MsG0880043622.01 | 0.807118 | 5.909528e-50 | 3.264099e-47 |
| MsG0680030907.01 | MsG0880043622.01 | 0.870184 | 1.768058e-66 | 6.815191e-63 |
| MsG0680031826.01 | MsG0880043622.01 | 0.824228 | 9.042914e-54 | 7.961941e-51 |
| MsG0680031996.01 | MsG0880043622.01 | 0.835322 | 1.795051e-56 | 2.187719e-53 |
| MsG0680031998.01 | MsG0880043622.01 | 0.810655 | 1.034776e-50 | 6.273772e-48 |
| MsG0480018666.01 | MsG0880043622.01 | 0.810890 | 9.205547e-51 | 5.616595e-48 |
| MsG0480018670.01 | MsG0880043622.01 | 0.818183 | 2.238395e-52 | 1.663801e-49 |
| MsG0480018673.01 | MsG0880043622.01 | 0.825819 | 3.807646e-54 | 3.508580e-51 |
| MsG0480018676.01 | MsG0880043622.01 | 0.834502 | 2.887655e-56 | 3.433663e-53 |
| MsG0480018910.01 | MsG0880043622.01 | 0.828881 | 7.026138e-55 | 7.073433e-52 |
| MsG0480018997.01 | MsG0880043622.01 | 0.822033 | 2.941476e-53 | 2.433606e-50 |
| MsG0480019065.01 | MsG0880043622.01 | 0.801188 | 1.013101e-48 | 4.807817e-46 |
| MsG0480019313.01 | MsG0880043622.01 | 0.810228 | 1.279406e-50 | 7.669266e-48 |
| MsG0480019384.01 | MsG0880043622.01 | 0.825068 | 5.732889e-54 | 5.170915e-51 |
| MsG0480020229.01 | MsG0880043622.01 | 0.837471 | 5.097697e-57 | 6.628822e-54 |
| MsG0480020473.01 | MsG0880043622.01 | 0.866750 | 2.268570e-65 | 7.731826e-62 |
| MsG0480021207.01 | MsG0880043622.01 | 0.820179 | 7.865309e-53 | 6.179250e-50 |
| MsG0480021248.01 | MsG0880043622.01 | 0.853782 | 1.903028e-61 | 4.159078e-58 |
| MsG0480021377.01 | MsG0880043622.01 | 0.809138 | 2.194034e-50 | 1.277961e-47 |
| MsG0480021406.01 | MsG0880043622.01 | 0.805788 | 1.126996e-49 | 6.016479e-47 |
| MsG0480021597.01 | MsG0880043622.01 | 0.816661 | 4.930225e-52 | 3.514885e-49 |
| MsG0480022161.01 | MsG0880043622.01 | 0.815352 | 9.660418e-52 | 6.644709e-49 |
| MsG0480022162.01 | MsG0880043622.01 | 0.854415 | 1.249762e-61 | 2.788885e-58 |
| MsG0480022617.01 | MsG0880043622.01 | 0.816308 | 5.912825e-52 | 4.175116e-49 |
| MsG0480022664.01 | MsG0880043622.01 | 0.823842 | 1.113998e-53 | 9.702571e-51 |
| MsG0480022918.01 | MsG0880043622.01 | 0.817998 | 2.465470e-52 | 1.823261e-49 |
| MsG0480022989.01 | MsG0880043622.01 | 0.810009 | 1.426231e-50 | 8.501455e-48 |
| MsG0480022994.01 | MsG0880043622.01 | 0.821577 | 3.750343e-53 | 3.062883e-50 |
| MsG0480023190.01 | MsG0880043622.01 | 0.860536 | 1.929467e-63 | 5.291991e-60 |
| MsG0480023452.01 | MsG0880043622.01 | 0.800705 | 1.271528e-48 | 5.960585e-46 |
| MsG0480023553.01 | MsG0880043622.01 | 0.802752 | 4.832263e-49 | 2.386186e-46 |
| MsG0480023723.01 | MsG0880043622.01 | 0.825686 | 4.095247e-54 | 3.759294e-51 |
| MsG0480023821.01 | MsG0880043622.01 | 0.815658 | 8.257962e-52 | 5.728105e-49 |
| MsG0480023877.01 | MsG0880043622.01 | 0.804899 | 1.730778e-49 | 9.031759e-47 |
| MsG0580024285.01 | MsG0880043622.01 | 0.816041 | 6.783755e-52 | 4.755184e-49 |
| MsG0580024340.01 | MsG0880043622.01 | 0.808209 | 3.465912e-50 | 1.969927e-47 |
| MsG0580024759.01 | MsG0880043622.01 | 0.800296 | 1.540746e-48 | 7.148542e-46 |
| MsG0580025226.01 | MsG0880043622.01 | 0.818661 | 1.744987e-52 | 1.314171e-49 |
| MsG0580025564.01 | MsG0880043622.01 | 0.813116 | 3.012439e-51 | 1.949930e-48 |
| MsG0580025610.01 | MsG0880043622.01 | 0.820407 | 6.973622e-53 | 5.513340e-50 |
| MsG0580025827.01 | MsG0880043622.01 | 0.833636 | 4.759711e-56 | 5.513703e-53 |
| MsG0580025845.01 | MsG0880043622.01 | 0.812484 | 4.143084e-51 | 2.637541e-48 |
| MsG0580026050.01 | MsG0880043622.01 | 0.808769 | 2.631413e-50 | 1.517578e-47 |
| MsG0380015896.01 | MsG0880043622.01 | 0.806164 | 9.396768e-50 | 5.064940e-47 |
| MsG0380016057.01 | MsG0880043622.01 | 0.845109 | 4.984854e-59 | 8.219496e-56 |
| MsG0380016188.01 | MsG0880043622.01 | -0.838889 | 2.198757e-57 | 2.985669e-54 |
| MsG0380016527.01 | MsG0880043622.01 | 0.815167 | 1.062049e-51 | 7.267554e-49 |
| MsG0380016545.01 | MsG0880043622.01 | 0.814066 | 1.861784e-51 | 1.236723e-48 |
| MsG0380018037.01 | MsG0880043622.01 | 0.818207 | 2.210492e-52 | 1.644107e-49 |
| MsG0480018226.01 | MsG0880043622.01 | 0.810834 | 9.464118e-51 | 5.765658e-48 |
| MsG0480018337.01 | MsG0880043622.01 | 0.812140 | 4.924374e-51 | 3.105986e-48 |
| MsG0580026271.01 | MsG0880043622.01 | 0.803423 | 3.511538e-49 | 1.763943e-46 |
| MsG0580026291.01 | MsG0880043622.01 | 0.813919 | 2.006078e-51 | 1.327200e-48 |
| MsG0580026498.01 | MsG0880043622.01 | 0.827655 | 1.387420e-54 | 1.347817e-51 |
| MsG0580028093.01 | MsG0880043622.01 | 0.829515 | 4.929281e-55 | 5.056266e-52 |
| MsG0580028208.01 | MsG0880043622.01 | 0.808495 | 3.011216e-50 | 1.724334e-47 |
| MsG0580028306.01 | MsG0880043622.01 | 0.802560 | 5.294641e-49 | 2.601560e-46 |
| MsG0580028419.01 | MsG0880043622.01 | 0.846503 | 2.085392e-59 | 3.597318e-56 |
| MsG0580028422.01 | MsG0880043622.01 | 0.821070 | 4.909132e-53 | 3.953580e-50 |
| MsG0580028423.01 | MsG0880043622.01 | 0.821619 | 3.666910e-53 | 2.998295e-50 |
| MsG0580028495.01 | MsG0880043622.01 | 0.805731 | 1.158503e-49 | 6.176009e-47 |
| MsG0580029862.01 | MsG0880043622.01 | 0.825436 | 4.693176e-54 | 4.277215e-51 |
| MsG0580030063.01 | MsG0880043622.01 | 0.803069 | 4.156366e-49 | 2.068861e-46 |
| MsG0580030071.01 | MsG0880043622.01 | 0.831147 | 1.968459e-55 | 2.117723e-52 |
| MsG0680030514.01 | MsG0880043622.01 | 0.801870 | 7.342281e-49 | 3.545104e-46 |
| MsG0680030516.01 | MsG0880043622.01 | 0.806169 | 9.373771e-50 | 5.053230e-47 |
| MsG0680030599.01 | MsG0880043622.01 | 0.819850 | 9.352155e-53 | 7.280027e-50 |
| MsG0680030680.01 | MsG0880043622.01 | 0.822021 | 2.960372e-53 | 2.448331e-50 |
| MsG0280006718.01 | MsG0880043622.01 | 0.817259 | 3.618963e-52 | 2.622476e-49 |
| MsG0280006914.01 | MsG0880043622.01 | 0.802947 | 4.404238e-49 | 2.185511e-46 |
| MsG0280006996.01 | MsG0880043622.01 | 0.821093 | 4.849089e-53 | 3.907543e-50 |
| MsG0280007561.01 | MsG0880043622.01 | 0.816511 | 5.326117e-52 | 3.781371e-49 |
| MsG0280007647.01 | MsG0880043622.01 | 0.819505 | 1.121364e-52 | 8.645574e-50 |
| MsG0280007852.01 | MsG0880043622.01 | 0.832699 | 8.143442e-56 | 9.173336e-53 |
| MsG0280007853.01 | MsG0880043622.01 | 0.828053 | 1.113511e-54 | 1.094458e-51 |
| MsG0280008343.01 | MsG0880043622.01 | 0.821385 | 4.152552e-53 | 3.373347e-50 |
| MsG0280008709.01 | MsG0880043622.01 | 0.829553 | 4.826986e-55 | 4.956624e-52 |
| MsG0280008928.01 | MsG0880043622.01 | 0.802758 | 4.819404e-49 | 2.380159e-46 |
| MsG0280009435.01 | MsG0880043622.01 | 0.814896 | 1.219620e-51 | 8.284888e-49 |
| MsG0280009436.01 | MsG0880043622.01 | 0.811732 | 6.043955e-51 | 3.770435e-48 |
| MsG0280009699.01 | MsG0880043622.01 | 0.830515 | 2.811310e-55 | 2.968517e-52 |
| MsG0280009756.01 | MsG0880043622.01 | 0.823651 | 1.234633e-53 | 1.069611e-50 |
| MsG0280009869.01 | MsG0880043622.01 | 0.800750 | 1.244905e-48 | 5.842529e-46 |
| MsG0280009953.01 | MsG0880043622.01 | 0.814658 | 1.377361e-51 | 9.296790e-49 |
| MsG0280009960.01 | MsG0880043622.01 | 0.805603 | 1.232431e-49 | 6.547834e-47 |
| MsG0680035664.01 | MsG0880043622.01 | 0.826566 | 2.528988e-54 | 2.380312e-51 |
| MsG0680035665.01 | MsG0880043622.01 | 0.800023 | 1.750168e-48 | 8.063828e-46 |
| MsG0780035960.01 | MsG0880043622.01 | 0.817807 | 2.722231e-52 | 2.002720e-49 |
| MsG0780035965.01 | MsG0880043622.01 | 0.849815 | 2.537809e-60 | 4.870706e-57 |
| MsG0780036509.01 | MsG0880043622.01 | 0.821573 | 3.757825e-53 | 3.068775e-50 |
| MsG0780036620.01 | MsG0880043622.01 | 0.844522 | 7.176521e-59 | 1.161696e-55 |
| MsG0780036792.01 | MsG0880043622.01 | 0.846581 | 1.985145e-59 | 3.432718e-56 |
| MsG0780036803.01 | MsG0880043622.01 | 0.803127 | 4.043330e-49 | 2.015642e-46 |
| MsG0780037351.01 | MsG0880043622.01 | 0.849210 | 3.742774e-60 | 7.044527e-57 |
| MsG0780037363.01 | MsG0880043622.01 | 0.841839 | 3.724996e-58 | 5.542349e-55 |
| MsG0780038056.01 | MsG0880043622.01 | 0.821444 | 4.025692e-53 | 3.275627e-50 |
| MsG0780039161.01 | MsG0880043622.01 | 0.826830 | 2.186885e-54 | 2.074013e-51 |
| MsG0780039179.01 | MsG0880043622.01 | 0.811982 | 5.331583e-51 | 3.348243e-48 |
| MsG0780039230.01 | MsG0880043622.01 | 0.817396 | 3.369623e-52 | 2.451167e-49 |
| MsG0780039256.01 | MsG0880043622.01 | 0.808361 | 3.216557e-50 | 1.835535e-47 |
| MsG0780039795.01 | MsG0880043622.01 | 0.838263 | 3.190137e-57 | 4.249729e-54 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043622.01.T01 | MTR_8g039090 | 91.716 | 169 | 14 | 0 | 1 | 169 | 24 | 192 | 1.27e-116 | 328 |
| MsG0880043622.01.T01 | MTR_3g019160 | 75.148 | 169 | 42 | 0 | 1 | 169 | 23 | 191 | 7.10e-95 | 273 |
| MsG0880043622.01.T01 | MTR_3g019090 | 72.121 | 165 | 46 | 0 | 5 | 169 | 27 | 191 | 9.51e-92 | 265 |
| MsG0880043622.01.T01 | MTR_3g019150 | 71.006 | 169 | 48 | 1 | 1 | 169 | 23 | 190 | 3.19e-88 | 256 |
| MsG0880043622.01.T01 | MTR_3g019090 | 72.535 | 142 | 39 | 0 | 28 | 169 | 1 | 142 | 5.56e-79 | 231 |
| MsG0880043622.01.T01 | MTR_3g019120 | 65.806 | 155 | 53 | 0 | 13 | 167 | 38 | 192 | 1.87e-74 | 228 |
| MsG0880043622.01.T01 | MTR_3g019120 | 65.806 | 155 | 53 | 0 | 13 | 167 | 38 | 192 | 3.26e-73 | 228 |
| MsG0880043622.01.T01 | MTR_3g019120 | 67.105 | 152 | 50 | 0 | 16 | 167 | 1 | 152 | 4.32e-73 | 227 |
| MsG0880043622.01.T01 | MTR_3g019150 | 77.000 | 100 | 23 | 0 | 70 | 169 | 35 | 134 | 3.05e-55 | 171 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043622.01.T01 | AT3G27890 | 75.000 | 168 | 42 | 0 | 1 | 168 | 29 | 196 | 1.16e-88 | 258 |
Find 46 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAATATCAATATGATTT+TGG | 0.116343 | 8:-27891695 | MsG0880043622.01.T01:three_prime_UTR |
| TAGTGCATTAGAGTAATTTA+AGG | 0.190097 | 8:+27891725 | None:intergenic |
| ATTAAAGTGGCAGCTCTTTC+TGG | 0.193210 | 8:-27893860 | MsG0880043622.01.T01:five_prime_UTR |
| TTTGACCAATGTGAATAATT+TGG | 0.258338 | 8:+27891551 | None:intergenic |
| ATATATCAAGCAGATGATTT+AGG | 0.273257 | 8:+27891528 | None:intergenic |
| CATCTAGACCACCAAATGTT+TGG | 0.329711 | 8:-27892004 | MsG0880043622.01.T01:CDS |
| CATTGAAGAATGCAATTGAT+TGG | 0.367565 | 8:-27892028 | MsG0880043622.01.T01:CDS |
| ATCTAGACCACCAAATGTTT+GGG | 0.385196 | 8:-27892003 | MsG0880043622.01.T01:CDS |
| CAATCAATTGCATTCTTCAA+TGG | 0.420729 | 8:+27892029 | None:intergenic |
| GCATTTACTCTAAGACTTCA+AGG | 0.439732 | 8:-27891759 | MsG0880043622.01.T01:CDS |
| TGGCGAAAAGCTTCAACAAC+AGG | 0.452851 | 8:+27893597 | None:intergenic |
| ATTGAAGAATGCAATTGATT+GGG | 0.453647 | 8:-27892027 | MsG0880043622.01.T01:CDS |
| TTTCCAGCCCAAACATTTGG+TGG | 0.464756 | 8:+27891996 | None:intergenic |
| ATAAGCACTGGAGGAGACTT+TGG | 0.465806 | 8:-27891960 | MsG0880043622.01.T01:CDS |
| AGAGAGAACCAGCACGGATA+AGG | 0.467956 | 8:+27893807 | None:intergenic |
| CACTCAGGCCTTATCCGTGC+TGG | 0.477633 | 8:-27893815 | MsG0880043622.01.T01:five_prime_UTR |
| CCTGCAAAATTCAATGATGA+TGG | 0.504624 | 8:-27891840 | MsG0880043622.01.T01:CDS |
| GTTGTAGTATTCAATTTCCA+TGG | 0.508204 | 8:-27893743 | MsG0880043622.01.T01:five_prime_UTR |
| GCAGCAATTGAATTGAGTAA+AGG | 0.518179 | 8:-27893708 | MsG0880043622.01.T01:CDS |
| TTTGATTGATGAAGAGGCTA+AGG | 0.522697 | 8:-27891814 | MsG0880043622.01.T01:CDS |
| AGACCACCAAATGTTTGGGC+TGG | 0.522737 | 8:-27891999 | MsG0880043622.01.T01:CDS |
| TTGAGTAAAGGAGCAATTGA+AGG | 0.530953 | 8:-27893696 | MsG0880043622.01.T01:CDS |
| GCAGCTGCAATCATAAGCAC+TGG | 0.535634 | 8:-27891972 | MsG0880043622.01.T01:CDS |
| CAATATCATCTACGCCAAGT+TGG | 0.566210 | 8:-27891924 | MsG0880043622.01.T01:CDS |
| TCAAGATCAGTGTTATACAT+TGG | 0.571274 | 8:+27893639 | None:intergenic |
| TGTGACCAAATTATTCACAT+TGG | 0.573086 | 8:-27891556 | MsG0880043622.01.T01:three_prime_UTR |
| TAACACTGATCTTGAAAACA+AGG | 0.588794 | 8:-27893631 | MsG0880043622.01.T01:CDS |
| GAGTATAATTACTCTCTCAC+AGG | 0.592007 | 8:-27893534 | MsG0880043622.01.T01:intron |
| AGAAAAGCTTCGTACCACTC+AGG | 0.601969 | 8:-27893830 | MsG0880043622.01.T01:five_prime_UTR |
| CGAAAAGCTTCAACAACAGG+TGG | 0.602230 | 8:+27893600 | None:intergenic |
| GTGAGAGAGTAATTATACTC+AGG | 0.609716 | 8:+27893537 | None:intergenic |
| ACTGGAGGAGACTTTGGCGG+TGG | 0.610622 | 8:-27891954 | MsG0880043622.01.T01:CDS |
| AGCACTGGAGGAGACTTTGG+CGG | 0.611760 | 8:-27891957 | MsG0880043622.01.T01:CDS |
| TGGCGATTTGATTGATGAAG+AGG | 0.612134 | 8:-27891820 | MsG0880043622.01.T01:CDS |
| TATTATTCAAAATCTATGAG+AGG | 0.616565 | 8:+27891596 | None:intergenic |
| GGCAGCAGCAGTGATTAAAG+TGG | 0.626013 | 8:-27893873 | MsG0880043622.01.T01:five_prime_UTR |
| ACAGAACACTAGCTAAGTCA+TGG | 0.629230 | 8:-27893894 | MsG0880043622.01.T01:five_prime_UTR |
| GCTGCAATCATCATCAACCA+TGG | 0.629682 | 8:+27893726 | None:intergenic |
| GATCGATATAGACTCCAACT+TGG | 0.643158 | 8:+27891910 | None:intergenic |
| AATGCTCTTAGAAAGAACTC+AGG | 0.646361 | 8:+27891870 | None:intergenic |
| GCTGCAATCATAAGCACTGG+AGG | 0.650272 | 8:-27891969 | MsG0880043622.01.T01:CDS |
| TATCAGCTTGAAGAATCTTG+TGG | 0.652286 | 8:+27893577 | None:intergenic |
| AGACAAAGAGAGAACCAGCA+CGG | 0.666728 | 8:+27893801 | None:intergenic |
| AACACTGATCTTGAAAACAA+GGG | 0.673165 | 8:-27893630 | MsG0880043622.01.T01:CDS |
| AATGTCATTCAGAATGTGCA+TGG | 0.673839 | 8:-27891658 | MsG0880043622.01.T01:three_prime_UTR |
| CAGCACGGATAAGGCCTGAG+TGG | 0.702973 | 8:+27893816 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATACTTAACAATTTTTATAA+TGG | - | Chr8:27892290-27892309 | MsG0880043622.01.T01:intron | 10.0% |
| !!! | TAATTCTTTTTATTACAAAT+TGG | + | Chr8:27893334-27893353 | None:intergenic | 10.0% |
| !! | AATTATCAAAGAAAATAACA+TGG | + | Chr8:27892778-27892797 | None:intergenic | 15.0% |
| !! | AATTCATCAAAAGAAATATA+CGG | + | Chr8:27892117-27892136 | None:intergenic | 15.0% |
| !! | TTAAAAAAAATTATGCAATG+CGG | - | Chr8:27892936-27892955 | MsG0880043622.01.T01:intron | 15.0% |
| !! | TTTATACCATTTAAATACTA+CGG | + | Chr8:27893147-27893166 | None:intergenic | 15.0% |
| !!! | ATATTTCTTTTGATGAATTA+AGG | - | Chr8:27892118-27892137 | MsG0880043622.01.T01:intron | 15.0% |
| !!! | TATATTTTTTCTTTTGAATC+AGG | - | Chr8:27893257-27893276 | MsG0880043622.01.T01:intron | 15.0% |
| !!! | TGATCTAGATTTTATTTTTT+TGG | - | Chr8:27891962-27891981 | MsG0880043622.01.T01:CDS | 15.0% |
| !!! | TTCAAATATCAATATGATTT+TGG | - | Chr8:27893754-27893773 | MsG0880043622.01.T01:five_prime_UTR | 15.0% |
| !!! | TTCTTTTATTCTTCTATTAT+TGG | + | Chr8:27892000-27892019 | None:intergenic | 15.0% |
| !! | ATTCATCAAAAGAAATATAC+GGG | + | Chr8:27892116-27892135 | None:intergenic | 20.0% |
| !! | TAAAAAAAATTATGCAATGC+GGG | - | Chr8:27892937-27892956 | MsG0880043622.01.T01:intron | 20.0% |
| !! | TATTATTCAAAATCTATGAG+AGG | + | Chr8:27893856-27893875 | None:intergenic | 20.0% |
| !!! | ATTAAGTAGTTTTCTTCATT+CGG | + | Chr8:27892746-27892765 | None:intergenic | 20.0% |
| !!! | CTTTGAAATTGTAATAGTTT+GGG | - | Chr8:27892333-27892352 | MsG0880043622.01.T01:intron | 20.0% |
| !!! | TCTTTTTATTACAAATTGGT+TGG | + | Chr8:27893330-27893349 | None:intergenic | 20.0% |
| !!! | TTGATATATACTGACTTTTT+TGG | - | Chr8:27893935-27893954 | MsG0880043622.01.T01:five_prime_UTR | 20.0% |
| ! | AAAAAAAATTATGCAATGCG+GGG | - | Chr8:27892938-27892957 | MsG0880043622.01.T01:intron | 25.0% |
| ! | ATATATCAAGCAGATGATTT+AGG | + | Chr8:27893924-27893943 | None:intergenic | 25.0% |
| ! | ATTGAAGAATGCAATTGATT+GGG | - | Chr8:27893422-27893441 | MsG0880043622.01.T01:intron | 25.0% |
| ! | CAACTACCATTGATATTTAA+AGG | - | Chr8:27892810-27892829 | MsG0880043622.01.T01:intron | 25.0% |
| ! | CCAAACTATTACAATTTCAA+AGG | + | Chr8:27892335-27892354 | None:intergenic | 25.0% |
| ! | GAATGTTTGATGAGAAAATT+CGG | + | Chr8:27893213-27893232 | None:intergenic | 25.0% |
| ! | TAGTGCATTAGAGTAATTTA+AGG | + | Chr8:27893727-27893746 | None:intergenic | 25.0% |
| ! | TTTGACCAATGTGAATAATT+TGG | + | Chr8:27893901-27893920 | None:intergenic | 25.0% |
| !! | ATCAATATGATTTTGGACTT+TGG | - | Chr8:27893761-27893780 | MsG0880043622.01.T01:five_prime_UTR | 25.0% |
| !! | GAGGAAATAATACATTTTCA+AGG | + | Chr8:27893837-27893856 | None:intergenic | 25.0% |
| !! | TGTTAAAGTGAACACATTTT+TGG | - | Chr8:27892860-27892879 | MsG0880043622.01.T01:intron | 25.0% |
| !! | TTAAGTAGTTTTCTTCATTC+GGG | + | Chr8:27892745-27892764 | None:intergenic | 25.0% |
| !!! | CCTTTGAAATTGTAATAGTT+TGG | - | Chr8:27892332-27892351 | MsG0880043622.01.T01:intron | 25.0% |
| AAAGGAGCAACTAAATCAAT+CGG | - | Chr8:27892828-27892847 | MsG0880043622.01.T01:intron | 30.0% | |
| AACACTGATCTTGAAAACAA+GGG | - | Chr8:27891819-27891838 | MsG0880043622.01.T01:CDS | 30.0% | |
| ACACAAAATAAAGGTGAAGA+TGG | + | Chr8:27893394-27893413 | None:intergenic | 30.0% | |
| AGAGCCAATATATAGTACTT+CGG | - | Chr8:27892152-27892171 | MsG0880043622.01.T01:intron | 30.0% | |
| ATGCATTGCAATATTTCTCT+AGG | - | Chr8:27892886-27892905 | MsG0880043622.01.T01:intron | 30.0% | |
| CAATCAATTGCATTCTTCAA+TGG | + | Chr8:27893423-27893442 | None:intergenic | 30.0% | |
| CACAAAATAAAGGTGAAGAT+GGG | + | Chr8:27893393-27893412 | None:intergenic | 30.0% | |
| CATTGAAGAATGCAATTGAT+TGG | - | Chr8:27893421-27893440 | MsG0880043622.01.T01:intron | 30.0% | |
| CTATATCTCAGAATGTAGAA+TGG | + | Chr8:27893180-27893199 | None:intergenic | 30.0% | |
| GTTGCTCCTTTAAATATCAA+TGG | + | Chr8:27892819-27892838 | None:intergenic | 30.0% | |
| GTTGTAGTATTCAATTTCCA+TGG | - | Chr8:27891706-27891725 | MsG0880043622.01.T01:three_prime_UTR | 30.0% | |
| TAACACTGATCTTGAAAACA+AGG | - | Chr8:27891818-27891837 | MsG0880043622.01.T01:CDS | 30.0% | |
| TCAAGATCAGTGTTATACAT+TGG | + | Chr8:27891813-27891832 | None:intergenic | 30.0% | |
| TCTGAACCGTAGTATTTAAA+TGG | - | Chr8:27893138-27893157 | MsG0880043622.01.T01:intron | 30.0% | |
| TGCATTGCAATATTTCTCTA+GGG | - | Chr8:27892887-27892906 | MsG0880043622.01.T01:intron | 30.0% | |
| TGGAGCTAAACACAAAATAA+AGG | + | Chr8:27893403-27893422 | None:intergenic | 30.0% | |
| TGTGACCAAATTATTCACAT+TGG | - | Chr8:27893893-27893912 | MsG0880043622.01.T01:five_prime_UTR | 30.0% | |
| ! | TAGACCGAAGTACTATATAT+TGG | + | Chr8:27892159-27892178 | None:intergenic | 30.0% |
| ! | TTGATAGCTCAACATTTCAA+TGG | - | Chr8:27892367-27892386 | MsG0880043622.01.T01:intron | 30.0% |
| !! | TTCTGAGATATAGACACAAA+TGG | - | Chr8:27893187-27893206 | MsG0880043622.01.T01:intron | 30.0% |
| !! | TTGTAGCTTTGAAATGATCA+TGG | + | Chr8:27892467-27892486 | None:intergenic | 30.0% |
| AAAGTGAAAGAACCGACAAA+CGG | - | Chr8:27892493-27892512 | MsG0880043622.01.T01:intron | 35.0% | |
| AAGTATATGAGAATCGGGTA+TGG | - | Chr8:27893051-27893070 | MsG0880043622.01.T01:intron | 35.0% | |
| AATGCTCTTAGAAAGAACTC+AGG | + | Chr8:27893582-27893601 | None:intergenic | 35.0% | |
| AATGTCATTCAGAATGTGCA+TGG | - | Chr8:27893791-27893810 | MsG0880043622.01.T01:five_prime_UTR | 35.0% | |
| ACGGGTAAGTATATGAGAAT+CGG | - | Chr8:27893045-27893064 | MsG0880043622.01.T01:intron | 35.0% | |
| AGTATATGAGAATCGGGTAT+GGG | - | Chr8:27893052-27893071 | MsG0880043622.01.T01:intron | 35.0% | |
| ATCTAGACCACCAAATGTTT+GGG | - | Chr8:27893446-27893465 | MsG0880043622.01.T01:intron | 35.0% | |
| CCTGCAAAATTCAATGATGA+TGG | - | Chr8:27893609-27893628 | MsG0880043622.01.T01:CDS | 35.0% | |
| GAGTATAATTACTCTCTCAC+AGG | - | Chr8:27891915-27891934 | MsG0880043622.01.T01:CDS | 35.0% | |
| GCAGCAATTGAATTGAGTAA+AGG | - | Chr8:27891741-27891760 | MsG0880043622.01.T01:exon | 35.0% | |
| GCATTGCAATATTTCTCTAG+GGG | - | Chr8:27892888-27892907 | MsG0880043622.01.T01:intron | 35.0% | |
| GTGAGAGAGTAATTATACTC+AGG | + | Chr8:27891915-27891934 | None:intergenic | 35.0% | |
| TAGTTGCTATATAGTCGCAA+AGG | + | Chr8:27892089-27892108 | None:intergenic | 35.0% | |
| TATATAGTCGCAAAGGTAGT+AGG | + | Chr8:27892082-27892101 | None:intergenic | 35.0% | |
| TATCAGCTTGAAGAATCTTG+TGG | + | Chr8:27891875-27891894 | None:intergenic | 35.0% | |
| TCATATATAGACACCAAGAG+TGG | + | Chr8:27892267-27892286 | None:intergenic | 35.0% | |
| TTGAGTAAAGGAGCAATTGA+AGG | - | Chr8:27891753-27891772 | MsG0880043622.01.T01:CDS | 35.0% | |
| TTTGATTGATGAAGAGGCTA+AGG | - | Chr8:27893635-27893654 | MsG0880043622.01.T01:CDS | 35.0% | |
| ! | CCATCATCATTGAATTTTGC+AGG | + | Chr8:27893612-27893631 | None:intergenic | 35.0% |
| ! | TCATCATTGAATTTTGCAGG+TGG | + | Chr8:27893609-27893628 | None:intergenic | 35.0% |
| ! | TTCTTGTGTCTGATCTTTTC+AGG | + | Chr8:27891531-27891550 | None:intergenic | 35.0% |
| ! | TTTTCCCCGATATCAAAACA+CGG | - | Chr8:27892662-27892681 | MsG0880043622.01.T01:intron | 35.0% |
| !! | GCATTTACTCTAAGACTTCA+AGG | - | Chr8:27893690-27893709 | MsG0880043622.01.T01:CDS | 35.0% |
| !! | TAGCTTTGAAATGATCATGG+TGG | + | Chr8:27892464-27892483 | None:intergenic | 35.0% |
| !! | TCTGATCTTTTCAGGAGATT+AGG | + | Chr8:27891523-27891542 | None:intergenic | 35.0% |
| !!! | ATATCCAACCGCTTTTTCAT+CGG | + | Chr8:27892528-27892547 | None:intergenic | 35.0% |
| AAAACCCGTCAAATTGGGTT+TGG | + | Chr8:27892608-27892627 | None:intergenic | 40.0% | |
| AAAATTATGCAATGCGGGGA+CGG | - | Chr8:27892942-27892961 | MsG0880043622.01.T01:intron | 40.0% | |
| AAGCGCTAAAGCTATCATGT+AGG | + | Chr8:27892396-27892415 | None:intergenic | 40.0% | |
| AATTCCGATGAAAAAGCGGT+TGG | - | Chr8:27892521-27892540 | MsG0880043622.01.T01:intron | 40.0% | |
| ACAGAACACTAGCTAAGTCA+TGG | - | Chr8:27891555-27891574 | MsG0880043622.01.T01:three_prime_UTR | 40.0% | |
| AGCGCTAAAGCTATCATGTA+GGG | + | Chr8:27892395-27892414 | None:intergenic | 40.0% | |
| ATACCCAAACCCAGTCAAAA+CGG | + | Chr8:27892633-27892652 | None:intergenic | 40.0% | |
| ATTAAAGTGGCAGCTCTTTC+TGG | - | Chr8:27891589-27891608 | MsG0880043622.01.T01:three_prime_UTR | 40.0% | |
| ATTCAATTTCTCATCCCCGT+TGG | - | Chr8:27893008-27893027 | MsG0880043622.01.T01:intron | 40.0% | |
| CAATATCATCTACGCCAAGT+TGG | - | Chr8:27893525-27893544 | MsG0880043622.01.T01:intron | 40.0% | |
| CAGACTATGCTATTATCCCT+AGG | + | Chr8:27893122-27893141 | None:intergenic | 40.0% | |
| CATCTAGACCACCAAATGTT+TGG | - | Chr8:27893445-27893464 | MsG0880043622.01.T01:intron | 40.0% | |
| CGATATCAAAACACGGGTAT+GGG | - | Chr8:27892669-27892688 | MsG0880043622.01.T01:intron | 40.0% | |
| CGGGTAAGTATATGAGAATC+GGG | - | Chr8:27893046-27893065 | MsG0880043622.01.T01:intron | 40.0% | |
| GATATGGCTCAGGGATAATT+AGG | - | Chr8:27892543-27892562 | MsG0880043622.01.T01:intron | 40.0% | |
| GATCGATATAGACTCCAACT+TGG | + | Chr8:27893542-27893561 | None:intergenic | 40.0% | |
| GATGAAAAAGCGGTTGGATA+TGG | - | Chr8:27892527-27892546 | MsG0880043622.01.T01:intron | 40.0% | |
| GCAAAGGTAGTAGGTATCAT+TGG | + | Chr8:27892073-27892092 | None:intergenic | 40.0% | |
| GGACAATTCCGATGAAAAAG+CGG | - | Chr8:27892517-27892536 | MsG0880043622.01.T01:intron | 40.0% | |
| GTATATGAGAATCGGGTATG+GGG | - | Chr8:27893053-27893072 | MsG0880043622.01.T01:intron | 40.0% | |
| TATGCTATTATCCCTAGGCA+TGG | + | Chr8:27893117-27893136 | None:intergenic | 40.0% | |
| TGGCGATTTGATTGATGAAG+AGG | - | Chr8:27893629-27893648 | MsG0880043622.01.T01:CDS | 40.0% | |
| TTCAATTTCTCATCCCCGTT+GGG | - | Chr8:27893009-27893028 | MsG0880043622.01.T01:intron | 40.0% | |
| TTTCCCCGATATCAAAACAC+GGG | - | Chr8:27892663-27892682 | MsG0880043622.01.T01:intron | 40.0% | |
| ! | GATCATGGTGGAAAGTCATT+GGG | + | Chr8:27892452-27892471 | None:intergenic | 40.0% |
| ! | GCAAGTTCTTTTATCGTTGC+AGG | - | Chr8:27893668-27893687 | MsG0880043622.01.T01:CDS | 40.0% |
| ! | TAGTTTTCTTCATTCGGGAC+AGG | + | Chr8:27892740-27892759 | None:intergenic | 40.0% |
| ! | TGATCATGGTGGAAAGTCAT+TGG | + | Chr8:27892453-27892472 | None:intergenic | 40.0% |
| !! | TGATAGCTTTAGCGCTTGAT+TGG | - | Chr8:27892399-27892418 | MsG0880043622.01.T01:intron | 40.0% |
| !! | TTTTGACTGGGTTTGGGTAT+GGG | - | Chr8:27892633-27892652 | MsG0880043622.01.T01:intron | 40.0% |
| !!! | ATACCCGTGTTTTGATATCG+GGG | + | Chr8:27892669-27892688 | None:intergenic | 40.0% |
| !!! | CATACCCGTGTTTTGATATC+GGG | + | Chr8:27892670-27892689 | None:intergenic | 40.0% |
| !!! | CCATACCCGTGTTTTGATAT+CGG | + | Chr8:27892671-27892690 | None:intergenic | 40.0% |
| AAATTATGCAATGCGGGGAC+GGG | - | Chr8:27892943-27892962 | MsG0880043622.01.T01:intron | 45.0% | |
| AAGGAGCTTTGCTAGCAAAG+GGG | + | Chr8:27892232-27892251 | None:intergenic | 45.0% | |
| AGAAAAGCTTCGTACCACTC+AGG | - | Chr8:27891619-27891638 | MsG0880043622.01.T01:three_prime_UTR | 45.0% | |
| AGACAAAGAGAGAACCAGCA+CGG | + | Chr8:27891651-27891670 | None:intergenic | 45.0% | |
| ATAGACACCAAGAGTGGCAA+GGG | + | Chr8:27892261-27892280 | None:intergenic | 45.0% | |
| ATCAAAACACGGGTATGGGA+CGG | - | Chr8:27892673-27892692 | MsG0880043622.01.T01:intron | 45.0% | |
| ATTATCCCTAGGCATGGCAA+TGG | + | Chr8:27893111-27893130 | None:intergenic | 45.0% | |
| CCGAACCAAACCCAATTTGA+CGG | - | Chr8:27892600-27892619 | MsG0880043622.01.T01:intron | 45.0% | |
| CCGATATCAAAACACGGGTA+TGG | - | Chr8:27892668-27892687 | MsG0880043622.01.T01:intron | 45.0% | |
| CGAAAAGCTTCAACAACAGG+TGG | + | Chr8:27891852-27891871 | None:intergenic | 45.0% | |
| CGAACCAAACCCAATTTGAC+GGG | - | Chr8:27892601-27892620 | MsG0880043622.01.T01:intron | 45.0% | |
| GAAGGAGCTTTGCTAGCAAA+GGG | + | Chr8:27892233-27892252 | None:intergenic | 45.0% | |
| GCTGCAATCATCATCAACCA+TGG | + | Chr8:27891726-27891745 | None:intergenic | 45.0% | |
| TACCCAAACCCAGTCAAAAC+GGG | + | Chr8:27892632-27892651 | None:intergenic | 45.0% | |
| TATAGACACCAAGAGTGGCA+AGG | + | Chr8:27892262-27892281 | None:intergenic | 45.0% | |
| TCTTCATTCGGGACAGGTTT+GGG | + | Chr8:27892734-27892753 | None:intergenic | 45.0% | |
| TGAAGGAGCTTTGCTAGCAA+AGG | + | Chr8:27892234-27892253 | None:intergenic | 45.0% | |
| TGGCGAAAAGCTTCAACAAC+AGG | + | Chr8:27891855-27891874 | None:intergenic | 45.0% | |
| TTATCCCTAGGCATGGCAAT+GGG | + | Chr8:27893110-27893129 | None:intergenic | 45.0% | |
| TTCTTCATTCGGGACAGGTT+TGG | + | Chr8:27892735-27892754 | None:intergenic | 45.0% | |
| TTTCCAGCCCAAACATTTGG+TGG | + | Chr8:27893456-27893475 | None:intergenic | 45.0% | |
| ! | AGTGGTACGAAGCTTTTCTG+AGG | + | Chr8:27891618-27891637 | None:intergenic | 45.0% |
| ! | CCGTCAAATTGGGTTTGGTT+CGG | + | Chr8:27892603-27892622 | None:intergenic | 45.0% |
| ! | CGTCAAATTGGGTTTGGTTC+GGG | + | Chr8:27892602-27892621 | None:intergenic | 45.0% |
| ! | GCTTTTCCAGCCCAAACATT+TGG | + | Chr8:27893459-27893478 | None:intergenic | 45.0% |
| ! | GTGGTACGAAGCTTTTCTGA+GGG | + | Chr8:27891617-27891636 | None:intergenic | 45.0% |
| !! | AAATTGGGTTTGGTTCGGGT+GGG | + | Chr8:27892598-27892617 | None:intergenic | 45.0% |
| !! | ATAAGCACTGGAGGAGACTT+TGG | - | Chr8:27893489-27893508 | MsG0880043622.01.T01:intron | 45.0% |
| !!! | GTTTTGACTGGGTTTGGGTA+TGG | - | Chr8:27892632-27892651 | MsG0880043622.01.T01:intron | 45.0% |
| AAAGCGGTTGGATATGGCTC+AGG | - | Chr8:27892533-27892552 | MsG0880043622.01.T01:intron | 50.0% | |
| AAGCGGTTGGATATGGCTCA+GGG | - | Chr8:27892534-27892553 | MsG0880043622.01.T01:intron | 50.0% | |
| AATTATGCAATGCGGGGACG+GGG | - | Chr8:27892944-27892963 | MsG0880043622.01.T01:intron | 50.0% | |
| ACCCAAACCCAGTCAAAACG+GGG | + | Chr8:27892631-27892650 | None:intergenic | 50.0% | |
| ACGGGGAAAACCCGTCAAAT+TGG | + | Chr8:27892614-27892633 | None:intergenic | 50.0% | |
| ACTGGGTTTGGGTATGGGTT+TGG | - | Chr8:27892638-27892657 | MsG0880043622.01.T01:intron | 50.0% | |
| AGACCACCAAATGTTTGGGC+TGG | - | Chr8:27893450-27893469 | MsG0880043622.01.T01:intron | 50.0% | |
| AGAGAGAACCAGCACGGATA+AGG | + | Chr8:27891645-27891664 | None:intergenic | 50.0% | |
| ATGAGAATCGGGTATGGGGA+TGG | - | Chr8:27893057-27893076 | MsG0880043622.01.T01:intron | 50.0% | |
| ATTCGGGACAGGTTTGGGTA+TGG | + | Chr8:27892729-27892748 | None:intergenic | 50.0% | |
| CGGAATTGTCCACCGTTTGT+CGG | + | Chr8:27892508-27892527 | None:intergenic | 50.0% | |
| CGGGGAAAACCCGTCAAATT+GGG | + | Chr8:27892613-27892632 | None:intergenic | 50.0% | |
| CTGGGTTTGGGTATGGGTTT+GGG | - | Chr8:27892639-27892658 | MsG0880043622.01.T01:intron | 50.0% | |
| GACGGGGTTATATTCCCTCA+AGG | + | Chr8:27892208-27892227 | None:intergenic | 50.0% | |
| GCAGCTGCAATCATAAGCAC+TGG | - | Chr8:27893477-27893496 | MsG0880043622.01.T01:intron | 50.0% | |
| GGCAACAAAACCCATACTCG+TGG | - | Chr8:27892569-27892588 | MsG0880043622.01.T01:intron | 50.0% | |
| GGCAGCAGCAGTGATTAAAG+TGG | - | Chr8:27891576-27891595 | MsG0880043622.01.T01:three_prime_UTR | 50.0% | |
| GGCTCAGGGATAATTAGGCA+TGG | - | Chr8:27892548-27892567 | MsG0880043622.01.T01:intron | 50.0% | |
| GTGAAAGAACCGACAAACGG+TGG | - | Chr8:27892496-27892515 | MsG0880043622.01.T01:intron | 50.0% | |
| GTTACCCTACCCATACCCAA+CGG | + | Chr8:27893027-27893046 | None:intergenic | 50.0% | |
| GTTGGGTATGGGTAGGGTAA+CGG | - | Chr8:27893026-27893045 | MsG0880043622.01.T01:intron | 50.0% | |
| TAGACACCAAGAGTGGCAAG+GGG | + | Chr8:27892260-27892279 | None:intergenic | 50.0% | |
| TATCCCTAGGCATGGCAATG+GGG | + | Chr8:27893109-27893128 | None:intergenic | 50.0% | |
| TCAAAACACGGGTATGGGAC+GGG | - | Chr8:27892674-27892693 | MsG0880043622.01.T01:intron | 50.0% | |
| TGAGAATCGGGTATGGGGAT+GGG | - | Chr8:27893058-27893077 | MsG0880043622.01.T01:intron | 50.0% | |
| TTACCCTACCCATACCCAAC+GGG | + | Chr8:27893026-27893045 | None:intergenic | 50.0% | |
| TTCCCTCAAGGTACGATGCA+CGG | + | Chr8:27892196-27892215 | None:intergenic | 50.0% | |
| TTCGGGACAGGTTTGGGTAT+GGG | + | Chr8:27892728-27892747 | None:intergenic | 50.0% | |
| TTCTCATCCCCGTTGGGTAT+GGG | - | Chr8:27893015-27893034 | MsG0880043622.01.T01:intron | 50.0% | |
| TTGGGTATGGGTAGGGTAAC+GGG | - | Chr8:27893027-27893046 | MsG0880043622.01.T01:intron | 50.0% | |
| TTTCTCATCCCCGTTGGGTA+TGG | - | Chr8:27893014-27893033 | MsG0880043622.01.T01:intron | 50.0% | |
| TTTGGGTATGGGTTCGAGGT+GGG | + | Chr8:27892717-27892736 | None:intergenic | 50.0% | |
| ! | CATGGTGGAAAGTCATTGGG+AGG | + | Chr8:27892449-27892468 | None:intergenic | 50.0% |
| !! | CAAATTGGGTTTGGTTCGGG+TGG | + | Chr8:27892599-27892618 | None:intergenic | 50.0% |
| !! | GCGCTTGATTGGTAATGCGT+AGG | - | Chr8:27892410-27892429 | MsG0880043622.01.T01:intron | 50.0% |
| !! | GCTGCAATCATAAGCACTGG+AGG | - | Chr8:27893480-27893499 | MsG0880043622.01.T01:intron | 50.0% |
| !!! | GGGTTTTCCCCGTTTTGACT+GGG | - | Chr8:27892621-27892640 | MsG0880043622.01.T01:intron | 50.0% |
| !!! | TCCCCGTTTTGACTGGGTTT+GGG | - | Chr8:27892627-27892646 | MsG0880043622.01.T01:intron | 50.0% |
| !!! | TTCCCCGTTTTGACTGGGTT+TGG | - | Chr8:27892626-27892645 | MsG0880043622.01.T01:intron | 50.0% |
| ACCCGTGCATCGTACCTTGA+GGG | - | Chr8:27892191-27892210 | MsG0880043622.01.T01:intron | 55.0% | |
| ATCCCCGTTGGGTATGGGTA+GGG | - | Chr8:27893020-27893039 | MsG0880043622.01.T01:intron | 55.0% | |
| CAGGTTTGGGTATGGGTTCG+AGG | + | Chr8:27892721-27892740 | None:intergenic | 55.0% | |
| CTTTGCTAGCAAAGGGGCGA+CGG | + | Chr8:27892226-27892245 | None:intergenic | 55.0% | |
| GAGAATCGGGTATGGGGATG+GGG | - | Chr8:27893059-27893078 | MsG0880043622.01.T01:intron | 55.0% | |
| GGGTGGGTAACCACGAGTAT+GGG | + | Chr8:27892582-27892601 | None:intergenic | 55.0% | |
| GTTTGGGTATGGGTTCGAGG+TGG | + | Chr8:27892718-27892737 | None:intergenic | 55.0% | |
| TACCCGTGCATCGTACCTTG+AGG | - | Chr8:27892190-27892209 | MsG0880043622.01.T01:intron | 55.0% | |
| TACCCTACCCATACCCAACG+GGG | + | Chr8:27893025-27893044 | None:intergenic | 55.0% | |
| TCCCTCAAGGTACGATGCAC+GGG | + | Chr8:27892195-27892214 | None:intergenic | 55.0% | |
| TTTGCTAGCAAAGGGGCGAC+GGG | + | Chr8:27892225-27892244 | None:intergenic | 55.0% | |
| ! | AGCACTGGAGGAGACTTTGG+CGG | - | Chr8:27893492-27893511 | MsG0880043622.01.T01:intron | 55.0% |
| !! | CGGGTTTTCCCCGTTTTGAC+TGG | - | Chr8:27892620-27892639 | MsG0880043622.01.T01:intron | 55.0% |
| !! | GGGACGGGTAACGGGTATAT+AGG | - | Chr8:27892689-27892708 | MsG0880043622.01.T01:intron | 55.0% |
| ACGGGTATGGGACGGGTAAC+GGG | - | Chr8:27892681-27892700 | MsG0880043622.01.T01:intron | 60.0% | |
| ACTGGAGGAGACTTTGGCGG+TGG | - | Chr8:27893495-27893514 | MsG0880043622.01.T01:intron | 60.0% | |
| AGAGTGGCAAGGGGCGATGA+AGG | + | Chr8:27892251-27892270 | None:intergenic | 60.0% | |
| CACGGGTATGGGACGGGTAA+CGG | - | Chr8:27892680-27892699 | MsG0880043622.01.T01:intron | 60.0% | |
| CAGCACGGATAAGGCCTGAG+TGG | + | Chr8:27891636-27891655 | None:intergenic | 60.0% | |
| CATCCCCGTTGGGTATGGGT+AGG | - | Chr8:27893019-27893038 | MsG0880043622.01.T01:intron | 60.0% | |
| CGGGTGGGTAACCACGAGTA+TGG | + | Chr8:27892583-27892602 | None:intergenic | 60.0% | |
| TCATCGCCCCTTGCCACTCT+TGG | - | Chr8:27892251-27892270 | MsG0880043622.01.T01:intron | 60.0% | |
| TTGCTAGCAAAGGGGCGACG+GGG | + | Chr8:27892224-27892243 | None:intergenic | 60.0% | |
| ! | CACTCAGGCCTTATCCGTGC+TGG | - | Chr8:27891634-27891653 | MsG0880043622.01.T01:three_prime_UTR | 60.0% |
| AATCCCATCCCCGTCCCCGA+CGG | + | Chr8:27892991-27893010 | None:intergenic | 65.0% | |
| ATACCCGAACCCGTCGGGGA+CGG | - | Chr8:27892978-27892997 | MsG0880043622.01.T01:intron | 65.0% | |
| ATGCAATGCGGGGACGGGGA+TGG | - | Chr8:27892948-27892967 | MsG0880043622.01.T01:intron | 65.0% | |
| CCCTAGGCATGGCAATGGGG+CGG | + | Chr8:27893106-27893125 | None:intergenic | 65.0% | |
| CCGCCCCATTGCCATGCCTA+GGG | - | Chr8:27893103-27893122 | MsG0880043622.01.T01:intron | 65.0% | |
| CCTAGGCATGGCAATGGGGC+GGG | + | Chr8:27893105-27893124 | None:intergenic | 65.0% | |
| CTAGGCATGGCAATGGGGCG+GGG | + | Chr8:27893104-27893123 | None:intergenic | 65.0% | |
| AACCCGTCGGGGACGGGGAT+GGG | - | Chr8:27892985-27893004 | MsG0880043622.01.T01:intron | 70.0% | |
| ATCCCATCCCCGTCCCCGAC+GGG | + | Chr8:27892990-27893009 | None:intergenic | 70.0% | |
| ATGCGGGGACGGGGATGGAG+CGG | - | Chr8:27892953-27892972 | MsG0880043622.01.T01:intron | 70.0% | |
| CATGGCAATGGGGCGGGGTG+GGG | + | Chr8:27893099-27893118 | None:intergenic | 70.0% | |
| CCCGCCCCATTGCCATGCCT+AGG | - | Chr8:27893102-27893121 | MsG0880043622.01.T01:intron | 70.0% | |
| CGGGGATACCCGAACCCGTC+GGG | - | Chr8:27892973-27892992 | MsG0880043622.01.T01:intron | 70.0% | |
| GCATGGCAATGGGGCGGGGT+GGG | + | Chr8:27893100-27893119 | None:intergenic | 70.0% | |
| GCGGGGATACCCGAACCCGT+CGG | - | Chr8:27892972-27892991 | MsG0880043622.01.T01:intron | 70.0% | |
| GGGGATACCCGAACCCGTCG+GGG | - | Chr8:27892974-27892993 | MsG0880043622.01.T01:intron | 70.0% | |
| TACCCGAACCCGTCGGGGAC+GGG | - | Chr8:27892979-27892998 | MsG0880043622.01.T01:intron | 70.0% | |
| ! | ATCCCCGTCCCCGACGGGTT+CGG | + | Chr8:27892985-27893004 | None:intergenic | 70.0% |
| ACCCGAACCCGTCGGGGACG+GGG | - | Chr8:27892980-27892999 | MsG0880043622.01.T01:intron | 75.0% | |
| CAATGGGGCGGGGTGGGGAC+GGG | + | Chr8:27893094-27893113 | None:intergenic | 75.0% | |
| GAACCCGTCGGGGACGGGGA+TGG | - | Chr8:27892984-27893003 | MsG0880043622.01.T01:intron | 75.0% | |
| GCAATGGGGCGGGGTGGGGA+CGG | + | Chr8:27893095-27893114 | None:intergenic | 75.0% | |
| GGCATGGCAATGGGGCGGGG+TGG | + | Chr8:27893101-27893120 | None:intergenic | 75.0% | |
| TGCGGGGACGGGGATGGAGC+GGG | - | Chr8:27892954-27892973 | MsG0880043622.01.T01:intron | 75.0% | |
| ! | TCCCCGTCCCCGACGGGTTC+GGG | + | Chr8:27892984-27893003 | None:intergenic | 75.0% |
| ! | GCGGGGACGGGGATGGAGCG+GGG | - | Chr8:27892955-27892974 | MsG0880043622.01.T01:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 27891507 | 27893964 | 27891507 | ID=MsG0880043622.01;Name=MsG0880043622.01 |
| Chr8 | mRNA | 27891507 | 27893964 | 27891507 | ID=MsG0880043622.01.T01;Parent=MsG0880043622.01;Name=MsG0880043622.01.T01;_AED=0.47;_eAED=0.47;_QI=225|1|1|1|1|1|2|242|169 |
| Chr8 | exon | 27891507 | 27892053 | 27891507 | ID=MsG0880043622.01.T01:exon:6762;Parent=MsG0880043622.01.T01 |
| Chr8 | exon | 27893535 | 27893964 | 27893535 | ID=MsG0880043622.01.T01:exon:6761;Parent=MsG0880043622.01.T01 |
| Chr8 | five_prime_UTR | 27893740 | 27893964 | 27893740 | ID=MsG0880043622.01.T01:five_prime_utr;Parent=MsG0880043622.01.T01 |
| Chr8 | CDS | 27893535 | 27893739 | 27893535 | ID=MsG0880043622.01.T01:cds;Parent=MsG0880043622.01.T01 |
| Chr8 | CDS | 27891749 | 27892053 | 27891749 | ID=MsG0880043622.01.T01:cds;Parent=MsG0880043622.01.T01 |
| Chr8 | three_prime_UTR | 27891507 | 27891748 | 27891507 | ID=MsG0880043622.01.T01:three_prime_utr;Parent=MsG0880043622.01.T01 |
| Gene Sequence |
| Protein sequence |
