AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580026713.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026713.01.T01 MTR_5g045620 94.767 516 25 1 1 516 147 660 0.0 1013
MsG0580026713.01.T01 MTR_5g044930 94.574 516 26 1 1 516 151 664 0.0 1011
MsG0580026713.01.T01 MTR_4g081540 34.024 338 209 6 185 514 454 785 7.55e-61 214
MsG0580026713.01.T01 MTR_1g066900 24.825 572 357 12 10 514 136 701 5.26e-42 160
MsG0580026713.01.T01 MTR_4g099200 23.274 507 296 15 67 515 215 686 7.54e-31 127
MsG0580026713.01.T01 MTR_5g459290 89.474 57 6 0 22 78 26 82 7.63e-31 115
MsG0580026713.01.T01 MTR_1g048080 24.928 345 221 8 96 409 469 806 2.32e-17 86.3
MsG0580026713.01.T01 MTR_6g022260 23.196 388 278 9 54 438 147 517 4.56e-17 84.7
MsG0580026713.01.T01 MTR_2g049740 25.071 351 216 9 90 406 215 552 2.63e-16 82.8
MsG0580026713.01.T01 MTR_4g068360 24.302 358 223 10 67 406 250 577 1.52e-15 80.1
MsG0580026713.01.T01 MTR_6g079920 21.121 464 316 9 58 488 107 553 2.33e-15 79.3
MsG0580026713.01.T01 MTR_3g037490 24.501 351 228 9 88 418 208 541 3.12e-15 79.0
MsG0580026713.01.T01 MTR_6g079590 21.842 380 271 8 65 439 233 591 1.25e-14 77.0
MsG0580026713.01.T01 MTR_6g079830 23.980 392 253 10 58 414 107 488 1.48e-14 77.0
MsG0580026713.01.T01 MTR_3g054110 21.491 456 297 9 79 496 116 548 1.54e-14 76.6
MsG0580026713.01.T01 MTR_8g083130 24.862 362 252 8 67 424 125 470 1.60e-14 76.6
MsG0580026713.01.T01 MTR_6g078160 22.968 283 202 4 144 423 234 503 1.89e-14 76.3
MsG0580026713.01.T01 MTR_2g035630 22.819 298 212 6 144 439 236 517 2.31e-14 75.9
MsG0580026713.01.T01 MTR_1g050495 24.080 299 207 6 144 439 236 517 2.61e-14 75.9
MsG0580026713.01.T01 MTR_1g031720 23.611 360 257 7 66 422 309 653 3.14e-14 76.3
MsG0580026713.01.T01 MTR_1g068960 22.678 366 255 7 65 422 163 508 4.38e-14 75.5
MsG0580026713.01.T01 MTR_1g068960 24.771 327 229 10 86 409 253 565 5.04e-12 68.9
MsG0580026713.01.T01 MTR_5g090170 21.116 502 321 14 4 466 213 678 4.44e-14 75.5
MsG0580026713.01.T01 MTR_7g091410 21.256 414 289 8 67 471 288 673 5.45e-14 75.5
MsG0580026713.01.T01 MTR_5g090170 21.158 501 320 14 4 465 213 677 5.80e-14 75.1
MsG0580026713.01.T01 MTR_7g091410 21.256 414 289 8 67 471 149 534 6.62e-14 74.7
MsG0580026713.01.T01 MTR_2g037740 25.098 255 183 4 185 439 131 377 8.55e-14 74.7
MsG0580026713.01.T01 MTR_5g095130 23.364 214 157 4 226 438 593 800 1.08e-13 74.3
MsG0580026713.01.T01 MTR_5g095130 21.277 282 212 4 144 425 590 861 9.22e-11 65.1
MsG0580026713.01.T01 MTR_7g091410 21.483 391 274 7 90 471 103 469 1.13e-13 73.9
MsG0580026713.01.T01 MTR_7g091410 22.727 396 263 11 90 471 62 428 1.48e-13 73.6
MsG0580026713.01.T01 MTR_7g103600 24.100 361 253 6 63 422 183 523 1.51e-13 73.9
MsG0580026713.01.T01 MTR_0014s0250 21.493 442 246 12 53 414 75 495 4.21e-13 72.0
MsG0580026713.01.T01 MTR_1g045880 23.810 294 214 4 118 411 229 512 4.43e-13 72.0
MsG0580026713.01.T01 MTR_3g061000 23.849 239 170 5 184 419 281 510 7.42e-13 71.2
MsG0580026713.01.T01 MTR_3g061000 23.984 246 167 4 238 478 157 387 1.92e-12 70.1
MsG0580026713.01.T01 MTR_6g079380 23.774 265 181 3 144 408 246 489 7.57e-13 71.2
MsG0580026713.01.T01 MTR_4g074390 21.237 372 272 5 86 455 216 568 1.07e-12 70.9
MsG0580026713.01.T01 MTR_4g074390 22.384 344 244 8 70 406 166 493 1.50e-11 67.4
MsG0580026713.01.T01 MTR_5g090210 23.892 406 245 10 23 425 378 722 1.24e-12 70.9
MsG0580026713.01.T01 MTR_5g090210 22.778 360 227 9 68 425 272 582 3.45e-11 66.2
MsG0580026713.01.T01 MTR_4g108060 21.204 382 260 6 86 455 82 434 1.79e-12 69.7
MsG0580026713.01.T01 MTR_4g108060 22.543 346 245 8 69 407 31 360 3.31e-12 68.9
MsG0580026713.01.T01 MTR_2g103520 24.314 255 179 4 226 478 211 453 1.81e-12 70.5
MsG0580026713.01.T01 MTR_4g108060 20.968 372 273 5 86 455 216 568 2.48e-12 69.7
MsG0580026713.01.T01 MTR_4g108060 22.609 345 244 8 69 406 165 493 3.34e-12 69.3
MsG0580026713.01.T01 MTR_1g095880 21.346 431 315 10 56 478 336 750 2.52e-12 70.1
MsG0580026713.01.T01 MTR_4g133740 24.465 327 229 7 89 411 200 512 3.88e-12 69.3
MsG0580026713.01.T01 MTR_6g072030 23.582 335 235 9 96 425 251 569 4.54e-12 68.9
MsG0580026713.01.T01 MTR_8g105170 26.214 206 150 2 221 425 242 446 4.60e-12 69.3
MsG0580026713.01.T01 MTR_8g105170 23.009 339 214 6 68 406 241 532 1.67e-11 67.4
MsG0580026713.01.T01 MTR_4g091600 26.606 218 116 5 249 425 213 427 5.42e-12 68.9
MsG0580026713.01.T01 MTR_6g065540 24.648 284 196 7 144 423 248 517 6.93e-12 68.2
MsG0580026713.01.T01 MTR_7g076550 25.234 214 150 4 217 425 172 380 7.16e-12 68.2
MsG0580026713.01.T01 MTR_1g108270 22.769 325 240 5 86 409 172 486 7.45e-12 68.2
MsG0580026713.01.T01 MTR_6g079250 21.176 340 219 7 65 403 73 364 1.12e-11 67.0
MsG0580026713.01.T01 MTR_6g078210 24.138 203 149 3 237 439 334 531 1.16e-11 67.4
MsG0580026713.01.T01 MTR_7g011500 24.201 219 150 3 267 482 202 407 1.34e-11 67.8
MsG0580026713.01.T01 MTR_7g011500 20.939 277 201 4 180 456 223 481 2.43e-11 66.6
MsG0580026713.01.T01 MTR_5g045490 27.000 200 145 1 220 419 320 518 1.38e-11 67.4
MsG0580026713.01.T01 MTR_7g007400 20.904 354 269 5 99 451 209 552 1.42e-11 67.4
MsG0580026713.01.T01 MTR_7g017570 23.358 274 168 6 261 494 254 525 1.48e-11 67.8
MsG0580026713.01.T01 MTR_0177s0060 22.650 468 287 14 23 439 46 489 1.75e-11 67.0
MsG0580026713.01.T01 MTR_0014s0210 21.729 451 306 13 36 478 21 432 2.29e-11 66.6
MsG0580026713.01.T01 MTR_8g107050 22.616 367 230 8 79 406 99 450 2.50e-11 66.6
MsG0580026713.01.T01 MTR_8g107050 21.867 407 268 9 67 439 263 653 7.68e-11 65.1
MsG0580026713.01.T01 MTR_2g026645 22.812 320 229 7 89 404 166 471 3.52e-11 66.2
MsG0580026713.01.T01 MTR_2g036080 24.268 239 171 5 226 464 185 413 3.67e-11 66.6
MsG0580026713.01.T01 MTR_8g107050 22.616 367 230 8 79 406 99 450 3.86e-11 66.2
MsG0580026713.01.T01 MTR_6g080200 23.153 203 151 3 237 439 302 499 4.12e-11 65.9
MsG0580026713.01.T01 MTR_7g073260 24.198 343 217 12 140 459 145 467 4.44e-11 65.9
MsG0580026713.01.T01 MTR_0308s0020 21.029 447 299 10 10 422 39 465 4.48e-11 65.5
MsG0580026713.01.T01 MTR_6g069840 21.203 349 253 8 67 410 195 526 4.67e-11 65.5
MsG0580026713.01.T01 MTR_8g054410 23.488 281 205 3 144 424 215 485 4.76e-11 65.9
MsG0580026713.01.T01 MTR_6g079310 21.225 457 310 11 56 479 34 473 5.06e-11 65.5
MsG0580026713.01.T01 MTR_6g069840 21.203 349 253 8 67 410 179 510 5.86e-11 65.1
MsG0580026713.01.T01 MTR_6g005000 22.093 344 248 9 67 405 296 624 6.98e-11 65.1
MsG0580026713.01.T01 MTR_2g018550 20.099 403 294 9 67 465 300 678 7.07e-11 65.5
MsG0580026713.01.T01 MTR_4g107210 24.516 310 216 9 98 403 131 426 7.15e-11 65.5
MsG0580026713.01.T01 MTR_4g107210 23.005 426 251 11 13 409 195 572 9.44e-11 65.1
MsG0580026713.01.T01 MTR_4g076540 24.789 355 239 8 59 405 419 753 8.39e-11 65.1
MsG0580026713.01.T01 MTR_6g077540 20.083 483 333 12 56 502 104 569 8.62e-11 64.7
MsG0580026713.01.T01 MTR_4g108650 21.636 379 249 8 65 425 212 560 8.68e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026713.01.T01 AT1G69290 65.957 517 170 4 1 516 147 658 0.0 711
MsG0580026713.01.T01 AT1G68980 59.496 516 194 4 1 516 119 619 0.0 631
MsG0580026713.01.T01 AT1G03100 34.957 349 216 6 173 515 450 793 5.62e-66 228
MsG0580026713.01.T01 AT3G09650 29.213 356 234 4 176 514 408 762 2.09e-45 170
MsG0580026713.01.T01 AT4G17616 26.136 264 159 5 226 489 416 643 2.55e-22 101
MsG0580026713.01.T01 AT3G54980 24.819 415 261 9 67 446 266 664 2.99e-18 89.0
MsG0580026713.01.T01 AT3G54980 24.819 415 261 9 67 446 266 664 2.99e-18 89.0
MsG0580026713.01.T01 AT5G64320 22.574 505 309 16 3 464 229 694 3.62e-18 88.6
MsG0580026713.01.T01 AT1G62720 25.936 374 244 11 67 433 137 484 2.29e-17 85.1
MsG0580026713.01.T01 AT1G64583 25.648 347 216 7 92 405 128 465 3.83e-17 84.7
MsG0580026713.01.T01 AT1G64583 25.648 347 216 7 92 405 103 440 4.16e-17 84.3
MsG0580026713.01.T01 AT5G04810 23.684 418 262 9 96 474 475 874 8.99e-17 84.3
MsG0580026713.01.T01 AT5G39710 22.843 394 260 8 66 425 166 549 1.04e-15 80.9
MsG0580026713.01.T01 AT1G19520 22.360 322 232 8 86 403 400 707 5.71e-15 78.2
MsG0580026713.01.T01 AT1G12300 25.225 333 210 8 144 451 301 619 6.15e-15 78.2
MsG0580026713.01.T01 AT1G12300 22.506 391 273 10 93 478 146 511 1.27e-12 70.9
MsG0580026713.01.T01 AT1G64100 25.339 221 155 3 261 481 438 648 6.67e-15 78.2
MsG0580026713.01.T01 AT1G64100 21.144 402 274 9 94 478 165 540 1.96e-12 70.5
MsG0580026713.01.T01 AT1G64100 25.604 207 144 3 261 467 438 634 9.07e-15 77.8
MsG0580026713.01.T01 AT1G64100 21.481 405 269 10 94 478 165 540 1.65e-12 70.5
MsG0580026713.01.T01 AT1G64100 25.604 207 144 3 261 467 438 634 9.07e-15 77.8
MsG0580026713.01.T01 AT1G64100 21.481 405 269 10 94 478 165 540 1.65e-12 70.5
MsG0580026713.01.T01 AT3G53700 21.921 406 281 10 67 464 187 564 2.27e-14 76.6
MsG0580026713.01.T01 AT3G53700 23.385 325 237 6 86 409 275 588 5.78e-11 65.9
MsG0580026713.01.T01 AT4G11690 23.416 363 220 8 104 425 162 507 4.23e-14 75.5
MsG0580026713.01.T01 AT1G12700 22.782 417 299 10 67 482 191 585 4.33e-14 75.5
MsG0580026713.01.T01 AT1G12700 22.947 414 296 10 67 479 207 598 4.51e-14 75.5
MsG0580026713.01.T01 AT1G12700 22.947 414 296 10 67 479 207 598 4.51e-14 75.5
MsG0580026713.01.T01 AT5G61400 23.767 223 163 2 206 425 185 403 6.65e-14 74.7
MsG0580026713.01.T01 AT5G61400 20.794 428 249 13 65 418 195 606 1.38e-11 67.4
MsG0580026713.01.T01 AT5G38730 26.432 227 156 4 226 452 209 424 7.53e-14 74.7
MsG0580026713.01.T01 AT2G41720 20.912 373 269 8 102 471 185 534 7.57e-14 74.7
MsG0580026713.01.T01 AT1G63080 25.490 204 145 2 225 425 210 409 7.87e-14 74.7
MsG0580026713.01.T01 AT1G63080 23.174 397 265 12 92 478 122 488 2.27e-13 73.2
MsG0580026713.01.T01 AT1G63080 25.490 204 145 2 225 425 210 409 7.87e-14 74.7
MsG0580026713.01.T01 AT1G63080 23.174 397 265 12 92 478 122 488 2.27e-13 73.2
MsG0580026713.01.T01 AT1G63080 25.490 204 145 2 225 425 210 409 7.87e-14 74.7
MsG0580026713.01.T01 AT1G63080 23.174 397 265 12 92 478 122 488 2.27e-13 73.2
MsG0580026713.01.T01 AT5G61990 21.429 448 265 9 88 465 470 900 8.27e-14 74.7
MsG0580026713.01.T01 AT5G61990 23.077 273 192 5 144 412 280 538 1.25e-11 67.8
MsG0580026713.01.T01 AT2G41720 20.912 373 269 8 102 471 317 666 8.37e-14 74.7
MsG0580026713.01.T01 AT2G41720 20.912 373 269 8 102 471 317 666 8.63e-14 74.7
MsG0580026713.01.T01 AT1G62680 25.641 195 135 3 229 417 132 322 9.77e-14 74.3
MsG0580026713.01.T01 AT1G62680 21.096 365 264 10 67 425 153 499 6.73e-11 65.1
MsG0580026713.01.T01 AT1G62680 25.641 195 135 3 229 417 132 322 9.77e-14 74.3
MsG0580026713.01.T01 AT1G62680 21.096 365 264 10 67 425 153 499 6.73e-11 65.1
MsG0580026713.01.T01 AT1G62670 23.739 337 227 9 138 470 288 598 1.35e-13 73.9
MsG0580026713.01.T01 AT1G62670 22.737 475 326 11 10 478 65 504 4.19e-11 65.9
MsG0580026713.01.T01 AT1G62670 23.739 337 227 9 138 470 288 598 1.35e-13 73.9
MsG0580026713.01.T01 AT1G62670 22.737 475 326 11 10 478 65 504 4.19e-11 65.9
MsG0580026713.01.T01 AT1G05670 20.972 391 268 8 67 425 279 660 1.65e-13 73.9
MsG0580026713.01.T01 AT1G05670 20.972 391 268 8 67 425 279 660 1.65e-13 73.9
MsG0580026713.01.T01 AT1G05670 20.972 391 268 8 67 425 279 660 1.65e-13 73.9
MsG0580026713.01.T01 AT3G07290 25.205 365 250 9 54 414 359 704 2.75e-13 73.2
MsG0580026713.01.T01 AT4G19440 22.973 370 245 7 86 423 359 720 3.11e-13 72.8
MsG0580026713.01.T01 AT4G19440 19.920 497 295 13 52 477 256 720 5.91e-11 65.9
MsG0580026713.01.T01 AT4G19440 22.973 370 245 7 86 423 359 720 3.11e-13 72.8
MsG0580026713.01.T01 AT4G19440 19.920 497 295 13 52 477 256 720 5.91e-11 65.9
MsG0580026713.01.T01 AT4G19440 22.973 370 245 7 86 423 359 720 3.11e-13 72.8
MsG0580026713.01.T01 AT4G19440 19.920 497 295 13 52 477 256 720 5.91e-11 65.9
MsG0580026713.01.T01 AT4G19440 22.973 370 245 7 86 423 359 720 3.11e-13 72.8
MsG0580026713.01.T01 AT4G19440 19.920 497 295 13 52 477 256 720 5.91e-11 65.9
MsG0580026713.01.T01 AT1G22960 24.566 403 265 14 45 430 310 690 3.14e-13 72.8
MsG0580026713.01.T01 AT1G22960 24.566 403 265 14 45 430 310 690 3.14e-13 72.8
MsG0580026713.01.T01 AT1G63230 25.500 200 148 1 226 425 47 245 3.75e-13 70.9
MsG0580026713.01.T01 AT1G63330 25.000 300 201 7 138 433 217 496 7.93e-13 71.2
MsG0580026713.01.T01 AT1G63330 25.000 300 201 7 138 433 217 496 7.93e-13 71.2
MsG0580026713.01.T01 AT1G63330 25.000 300 201 7 138 433 217 496 7.93e-13 71.2
MsG0580026713.01.T01 AT1G63130 22.314 363 227 9 67 425 254 565 8.33e-13 71.2
MsG0580026713.01.T01 AT1G63130 21.498 414 265 11 67 478 149 504 2.40e-12 70.1
MsG0580026713.01.T01 AT1G63130 22.314 363 227 9 67 425 254 565 8.33e-13 71.2
MsG0580026713.01.T01 AT1G63130 21.498 414 265 11 67 478 149 504 2.40e-12 70.1
MsG0580026713.01.T01 AT3G06920 22.066 213 161 2 226 438 558 765 8.47e-13 71.6
MsG0580026713.01.T01 AT3G16710 30.939 181 123 2 226 405 123 302 8.61e-13 70.9
MsG0580026713.01.T01 AT3G16710 21.739 345 248 8 67 406 151 478 1.31e-11 67.4
MsG0580026713.01.T01 AT1G63400 22.414 406 282 13 80 478 129 508 8.91e-13 71.2
MsG0580026713.01.T01 AT1G63400 22.513 382 251 9 67 414 153 523 7.48e-12 68.2
MsG0580026713.01.T01 AT3G06920 22.066 213 161 2 226 438 572 779 9.80e-13 71.2
MsG0580026713.01.T01 AT3G06920 22.066 213 161 2 226 438 572 779 9.80e-13 71.2
MsG0580026713.01.T01 AT3G16710 30.939 181 123 2 226 405 123 302 1.01e-12 70.5
MsG0580026713.01.T01 AT1G12620 23.099 355 255 8 79 429 116 456 1.03e-12 71.2
MsG0580026713.01.T01 AT1G12620 22.302 417 255 10 67 439 175 566 4.49e-12 68.9
MsG0580026713.01.T01 AT5G41170 27.976 168 120 1 239 406 26 192 1.10e-12 70.5
MsG0580026713.01.T01 AT1G12775 22.572 381 252 9 67 414 156 526 1.10e-12 70.9
MsG0580026713.01.T01 AT1G12775 23.111 225 165 3 209 429 252 472 8.86e-12 68.2
MsG0580026713.01.T01 AT1G62910 22.161 361 263 8 67 424 151 496 1.27e-12 70.9
MsG0580026713.01.T01 AT1G62910 25.373 268 180 7 144 406 296 548 2.34e-12 70.1
MsG0580026713.01.T01 AT1G62910 26.442 208 145 3 226 429 229 432 2.13e-11 67.0
MsG0580026713.01.T01 AT5G41170 27.976 168 120 1 239 406 126 292 1.59e-12 70.1
MsG0580026713.01.T01 AT5G41170 27.976 168 120 1 239 406 126 292 1.61e-12 70.1
MsG0580026713.01.T01 AT3G09060 24.189 339 190 9 144 419 293 627 2.54e-12 70.1
MsG0580026713.01.T01 AT3G09060 24.189 339 190 9 144 419 293 627 2.54e-12 70.1
MsG0580026713.01.T01 AT1G63150 22.832 346 214 9 67 409 151 446 2.59e-12 69.7
MsG0580026713.01.T01 AT1G63150 23.932 234 161 3 226 458 229 446 2.59e-12 69.7
MsG0580026713.01.T01 AT1G63150 22.832 346 214 9 67 409 151 446 2.59e-12 69.7
MsG0580026713.01.T01 AT1G63150 23.932 234 161 3 226 458 229 446 2.59e-12 69.7
MsG0580026713.01.T01 AT1G79080 27.273 165 119 1 236 399 227 391 3.65e-12 69.3
MsG0580026713.01.T01 AT3G61520 21.395 430 297 9 36 426 255 682 3.84e-12 69.3
MsG0580026713.01.T01 AT5G28370 21.346 431 298 9 36 427 255 683 4.40e-12 69.3
MsG0580026713.01.T01 AT4G11690 23.280 189 144 1 237 425 293 480 5.32e-12 68.6
MsG0580026713.01.T01 AT5G50280 24.046 262 188 3 209 469 333 584 5.45e-12 68.9
MsG0580026713.01.T01 AT1G62590 25.000 300 201 7 138 433 292 571 6.08e-12 68.6
MsG0580026713.01.T01 AT1G62590 25.000 300 201 7 138 433 292 571 6.08e-12 68.6
MsG0580026713.01.T01 AT4G26800 23.304 339 244 8 67 403 156 480 6.11e-12 68.6
MsG0580026713.01.T01 AT2G39230 26.316 190 140 0 234 423 463 652 6.40e-12 68.9
MsG0580026713.01.T01 AT5G28460 21.346 431 298 9 36 427 255 683 6.93e-12 68.6
MsG0580026713.01.T01 AT4G26800 23.304 339 244 8 67 403 11 335 7.21e-12 67.4
MsG0580026713.01.T01 AT5G27270 23.196 388 241 12 86 443 651 1011 8.29e-12 68.6
MsG0580026713.01.T01 AT4G26800 23.304 339 244 8 67 403 81 405 9.29e-12 67.4
MsG0580026713.01.T01 AT5G27270 22.879 389 241 12 86 443 446 806 9.45e-12 68.2
MsG0580026713.01.T01 AT5G27270 22.879 389 241 12 86 443 446 806 9.45e-12 68.2
MsG0580026713.01.T01 AT1G62930 23.724 392 269 11 92 478 137 503 9.85e-12 67.8
MsG0580026713.01.T01 AT1G62930 24.333 300 205 7 138 433 287 568 1.06e-11 67.8
MsG0580026713.01.T01 AT1G13040 20.000 385 284 6 67 449 147 509 1.27e-11 67.4
MsG0580026713.01.T01 AT1G13040 20.000 385 284 6 67 449 147 509 1.27e-11 67.4
MsG0580026713.01.T01 AT5G14770 23.222 478 282 20 67 496 49 489 1.44e-11 67.8
MsG0580026713.01.T01 AT5G14770 23.222 478 282 20 67 496 49 489 1.44e-11 67.8
MsG0580026713.01.T01 AT5G14770 23.222 478 282 20 67 496 49 489 1.44e-11 67.8
MsG0580026713.01.T01 AT5G14770 23.222 478 282 20 67 496 49 489 1.44e-11 67.8
MsG0580026713.01.T01 AT5G14770 23.222 478 282 20 67 496 49 489 1.44e-11 67.8
MsG0580026713.01.T01 AT1G02060 21.306 291 219 4 191 478 108 391 2.15e-11 67.0
MsG0580026713.01.T01 AT2G17140 22.016 377 263 11 67 440 359 707 2.34e-11 67.0
MsG0580026713.01.T01 AT2G17140 22.016 377 263 11 67 440 359 707 2.34e-11 67.0
MsG0580026713.01.T01 AT1G62914 24.880 209 149 3 225 429 223 427 2.99e-11 66.2
MsG0580026713.01.T01 AT1G62914 22.917 384 243 11 67 412 146 514 9.93e-11 64.7
MsG0580026713.01.T01 AT2G06000 20.769 390 270 11 98 478 96 455 3.08e-11 66.2
MsG0580026713.01.T01 AT2G06000 20.769 390 270 11 98 478 96 455 3.08e-11 66.2
MsG0580026713.01.T01 AT4G16390 23.750 320 226 8 89 404 194 499 4.48e-11 65.9
MsG0580026713.01.T01 AT5G02860 23.103 290 203 5 180 465 171 444 4.96e-11 65.9
MsG0580026713.01.T01 AT5G02860 23.103 290 203 5 180 465 171 444 4.96e-11 65.9
MsG0580026713.01.T01 AT5G02860 23.103 290 203 5 180 465 171 444 4.96e-11 65.9
MsG0580026713.01.T01 AT5G02860 23.103 290 203 5 180 465 171 444 4.96e-11 65.9
MsG0580026713.01.T01 AT5G02860 23.103 290 203 5 180 465 171 444 4.96e-11 65.9
MsG0580026713.01.T01 AT2G15630 20.955 377 271 10 67 439 188 541 5.93e-11 65.5
MsG0580026713.01.T01 AT1G06710 23.077 247 174 4 225 465 377 613 6.08e-11 65.9
MsG0580026713.01.T01 AT1G06710 23.077 247 174 4 225 465 377 613 6.08e-11 65.9
MsG0580026713.01.T01 AT1G06710 23.077 247 174 4 225 465 377 613 6.08e-11 65.9
MsG0580026713.01.T01 AT1G06710 23.077 247 174 4 225 465 377 613 6.08e-11 65.9
MsG0580026713.01.T01 AT1G06710 23.077 247 174 4 225 465 377 613 6.08e-11 65.9
MsG0580026713.01.T01 AT1G06710 23.077 247 174 4 225 465 377 613 6.08e-11 65.9
MsG0580026713.01.T01 AT1G06710 23.077 247 174 4 225 465 377 613 6.08e-11 65.9
MsG0580026713.01.T01 AT2G32630 21.596 426 297 14 69 486 224 620 6.12e-11 65.5
MsG0580026713.01.T01 AT1G06710 23.077 247 174 4 225 465 377 613 6.37e-11 65.9
MsG0580026713.01.T01 AT1G06710 23.077 247 174 4 225 465 377 613 6.37e-11 65.9
MsG0580026713.01.T01 AT1G06710 23.077 247 174 4 225 465 377 613 6.37e-11 65.9
MsG0580026713.01.T01 AT1G06710 23.077 247 174 4 225 465 377 613 6.37e-11 65.9
MsG0580026713.01.T01 AT1G06710 23.077 247 174 4 225 465 377 613 6.37e-11 65.9
MsG0580026713.01.T01 AT1G06710 23.077 247 174 4 225 465 377 613 6.37e-11 65.9
MsG0580026713.01.T01 AT1G06710 23.077 247 174 4 225 465 377 613 6.37e-11 65.9
MsG0580026713.01.T01 AT1G06710 23.077 247 174 4 225 465 377 613 6.37e-11 65.9
MsG0580026713.01.T01 AT1G06710 23.077 247 174 4 225 465 377 613 6.37e-11 65.9
MsG0580026713.01.T01 AT1G06710 23.077 247 174 4 225 465 377 613 6.37e-11 65.9
MsG0580026713.01.T01 AT1G06710 23.077 247 174 4 225 465 377 613 6.37e-11 65.9
MsG0580026713.01.T01 AT1G06710 23.077 247 174 4 225 465 377 613 6.37e-11 65.9
MsG0580026713.01.T01 AT1G63070 23.383 402 256 13 67 433 143 527 6.76e-11 65.1
MsG0580026713.01.T01 AT5G65560 23.423 222 124 5 257 478 325 500 7.60e-11 65.5
MsG0580026713.01.T01 AT5G65560 23.423 222 124 5 257 478 325 500 7.60e-11 65.5
MsG0580026713.01.T01 AT5G65560 23.423 222 124 5 257 478 325 500 7.60e-11 65.5
MsG0580026713.01.T01 AT2G16880 22.857 420 226 14 47 424 151 514 7.77e-11 65.1
MsG0580026713.01.T01 AT1G52620 22.176 478 267 15 66 498 167 584 8.14e-11 65.1
MsG0580026713.01.T01 AT2G26790 25.401 374 247 14 65 425 419 773 9.33e-11 65.1
MsG0580026713.01.T01 AT2G26790 25.401 374 247 14 65 425 419 773 9.33e-11 65.1

Find 96 sgRNAs with CRISPR-Local

Find 129 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTATTTATATGCACTTAA+AGG 0.150295 5:+42731333 MsG0580026713.01.T01:CDS
TCTTAATAAGGGAAATATTA+AGG 0.178833 5:+42731575 MsG0580026713.01.T01:CDS
TTGGGAGGCTCTGTGGGACT+TGG 0.200113 5:+42731744 MsG0580026713.01.T01:CDS
AATTAAGGAATATCTTAATA+AGG 0.265323 5:+42731563 MsG0580026713.01.T01:CDS
GATTATTGAAGCTCAGAAAT+TGG 0.273337 5:+42731611 MsG0580026713.01.T01:CDS
TGGGAGGCTCTGTGGGACTT+GGG 0.297254 5:+42731745 MsG0580026713.01.T01:CDS
AAGCCTGATGTGTTTAGTTT+TGG 0.305298 5:+42731303 MsG0580026713.01.T01:CDS
CTTAATAAGGGAAATATTAA+GGG 0.314575 5:+42731576 MsG0580026713.01.T01:CDS
CCGAAACATATCCGTTAATC+AGG 0.334305 5:-42732202 None:intergenic
GAACCATCGACCTGAGTTAA+TGG 0.340488 5:+42732010 MsG0580026713.01.T01:CDS
GTTGACGAGTCTATTGGTTT+TGG 0.351032 5:+42731651 MsG0580026713.01.T01:CDS
TGAAAATATTTGTTGATAAG+TGG 0.364460 5:+42732405 MsG0580026713.01.T01:CDS
GGAATGCATCAACCAGATTC+TGG 0.365582 5:-42732316 None:intergenic
AGCAGTGTTGGCGGATTTCA+TGG 0.368697 5:-42730998 None:intergenic
AACTATAATGACAGGTTTGA+TGG 0.371868 5:+42731986 MsG0580026713.01.T01:CDS
CTTATTTATATGCACTTAAA+GGG 0.372712 5:+42731334 MsG0580026713.01.T01:CDS
GATCAAATTTGACCAGAATC+TGG 0.372731 5:+42732304 MsG0580026713.01.T01:CDS
TTTGATTACTGGCTATGTTA+AGG 0.389744 5:+42731437 MsG0580026713.01.T01:CDS
CTTGATGAGATGAATGCTTT+GGG 0.393731 5:+42731726 MsG0580026713.01.T01:CDS
AGCTCAAAGTGGCTAGGTTA+AGG 0.396402 5:+42732462 MsG0580026713.01.T01:CDS
ACTTACTTGTCCCTGATTAA+CGG 0.399293 5:+42732191 MsG0580026713.01.T01:CDS
GAGATGATGACAAACAAGTT+TGG 0.400717 5:+42731511 MsG0580026713.01.T01:CDS
CCTGATTAACGGATATGTTT+CGG 0.401301 5:+42732202 MsG0580026713.01.T01:CDS
TGTTTCTATCAGAGCATCAT+AGG 0.407915 5:-42731874 None:intergenic
ATCAAAGTTGACGAGTCTAT+TGG 0.408220 5:+42731645 MsG0580026713.01.T01:CDS
ACAGAACTGCAGGGTTGCTT+TGG 0.409968 5:+42731152 MsG0580026713.01.T01:CDS
GAGATACAAGCAAGCGTTCA+TGG 0.416295 5:+42732427 MsG0580026713.01.T01:CDS
GGGAGGCTCTGTGGGACTTG+GGG 0.421493 5:+42731746 MsG0580026713.01.T01:CDS
GACAAGTAAGTCTGGTCATT+CGG 0.422887 5:-42732179 None:intergenic
TCTTGATGAGATGAATGCTT+TGG 0.429146 5:+42731725 MsG0580026713.01.T01:CDS
ATTAAGGAATATCTTAATAA+GGG 0.430759 5:+42731564 MsG0580026713.01.T01:CDS
TGGTCAAATTTGATCCCCTT+CGG 0.433100 5:-42732296 None:intergenic
CTCTGTTTAGGGACATGAGA+GGG 0.436667 5:+42731931 MsG0580026713.01.T01:CDS
GGCTGGTGATTTAGTTTCTG+TGG 0.441704 5:+42731458 MsG0580026713.01.T01:CDS
GGTCTATGTGCCGATCTTGA+AGG 0.443651 5:+42731767 MsG0580026713.01.T01:CDS
GTGACGGAGATTAGTAGTTC+AGG 0.447394 5:+42731831 MsG0580026713.01.T01:CDS
GGTCATTCGGCTCGAAGTGC+AGG 0.453085 5:-42732166 None:intergenic
ACGCCGCCCCATGAATGAAA+AGG 0.462031 5:-42731072 None:intergenic
GCATTACAAGCAGCAACATC+AGG 0.464759 5:-42731198 None:intergenic
AATGCTTTGGGAGGCTCTGT+GGG 0.466596 5:+42731738 MsG0580026713.01.T01:CDS
TTGAAGTAGGTACTCATGAT+TGG 0.467602 5:+42732069 MsG0580026713.01.T01:CDS
TTTCTTAGATGAGGTGGTTG+AGG 0.470772 5:+42732037 MsG0580026713.01.T01:CDS
GGGATGGGGATGGGCCGAAG+GGG 0.473534 5:+42732282 MsG0580026713.01.T01:CDS
ATCAGGCTTAACACCGAGCT+TGG 0.475678 5:-42731289 None:intergenic
GTGAATGCTTGTGTTAGTAT+TGG 0.477173 5:+42731678 MsG0580026713.01.T01:CDS
CTGATAGAAACATCCATGTC+TGG 0.481344 5:+42731885 MsG0580026713.01.T01:CDS
ACTGATGCTGACAGAGTTGT+TGG 0.482584 5:+42731258 MsG0580026713.01.T01:CDS
ATTACTGGCTATGTTAAGGC+TGG 0.488447 5:+42731441 MsG0580026713.01.T01:CDS
AATCCAAAACTAAACACATC+AGG 0.490880 5:-42731306 None:intergenic
GGTTGCTTTGGATGACAAGC+TGG 0.491271 5:+42731164 MsG0580026713.01.T01:CDS
GGGGATGGGGATGGGCCGAA+GGG 0.493325 5:+42732281 MsG0580026713.01.T01:CDS
CGCCGCCCCATGAATGAAAA+GGG 0.493702 5:-42731071 None:intergenic
CATTGATCTGACAAGTGAAA+AGG 0.498942 5:-42731028 None:intergenic
CTGAAAGTCTTGACCAGACA+TGG 0.499563 5:-42731898 None:intergenic
TAATCAGGGACAAGTAAGTC+TGG 0.511372 5:-42732187 None:intergenic
GGCAGCTTTCTTAGATGAGG+TGG 0.513007 5:+42732031 MsG0580026713.01.T01:CDS
AACTGCGGAGGCTACTCTAC+TGG 0.519494 5:+42731809 MsG0580026713.01.T01:CDS
GGCAGGAGGAGCAGTGTTGG+CGG 0.523088 5:-42731007 None:intergenic
TTGCAGTAAGCCTTCAAGAT+CGG 0.528610 5:-42731777 None:intergenic
TAGGGACATGAGAGGGGCGA+GGG 0.531432 5:+42731938 MsG0580026713.01.T01:CDS
TAGTAGTTCAGGTCTAAAGT+TGG 0.534004 5:+42731842 MsG0580026713.01.T01:CDS
CTCCCTTGACCATAGCATAC+AGG 0.534135 5:-42732337 None:intergenic
TTAGGGACATGAGAGGGGCG+AGG 0.535492 5:+42731937 MsG0580026713.01.T01:CDS
CGATTCAAGATGAAAACAGC+AGG 0.550214 5:-42731232 None:intergenic
AGTTACTTAACTATAATGAC+AGG 0.555158 5:+42731978 MsG0580026713.01.T01:CDS
GAGGATCCTCGTATTGAAGT+AGG 0.566574 5:+42732056 MsG0580026713.01.T01:CDS
ATTCCTGTATGCTATGGTCA+AGG 0.570553 5:+42732334 MsG0580026713.01.T01:CDS
AAAGGCAGGAGGAGCAGTGT+TGG 0.576259 5:-42731010 None:intergenic
TGATGCATTCCTGTATGCTA+TGG 0.578318 5:+42732328 MsG0580026713.01.T01:CDS
AAGAAAGCTGCCATTAACTC+AGG 0.580441 5:-42732020 None:intergenic
GTTGGAATTATGTCCAAGCT+CGG 0.583093 5:+42731276 MsG0580026713.01.T01:CDS
GAATGCTTTGGGAGGCTCTG+TGG 0.583278 5:+42731737 MsG0580026713.01.T01:CDS
AATGGCAGCTTTCTTAGATG+AGG 0.585676 5:+42732028 MsG0580026713.01.T01:CDS
GAGGTTAAGAGAAAGTTAGC+GGG 0.585709 5:+42732260 MsG0580026713.01.T01:CDS
TTCCTGTATGCTATGGTCAA+GGG 0.590606 5:+42732335 MsG0580026713.01.T01:CDS
GGAGGCTAGAAGATGCAAGA+AGG 0.593280 5:+42732123 MsG0580026713.01.T01:CDS
ATGCAAGAAGGACTTTCAGA+AGG 0.601668 5:+42732135 MsG0580026713.01.T01:CDS
TTCAGGTCTAAAGTTGGACG+TGG 0.606771 5:+42731848 MsG0580026713.01.T01:CDS
TCTCTGTTTAGGGACATGAG+AGG 0.609112 5:+42731930 MsG0580026713.01.T01:CDS
TGATGCTGTGATGCAAGTTG+TGG 0.610490 5:+42732367 MsG0580026713.01.T01:CDS
GATGAGATGAATGCTTTGGG+AGG 0.611114 5:+42731729 MsG0580026713.01.T01:CDS
GTCTGGTCAAGACTTTCAGT+CGG 0.614547 5:+42731902 MsG0580026713.01.T01:CDS
CGAGGTTAAGAGAAAGTTAG+CGG 0.617178 5:+42732259 MsG0580026713.01.T01:CDS
CGAAACATATCCGTTAATCA+GGG 0.620823 5:-42732201 None:intergenic
TGTGATGATGTTGTGGAACG+AGG 0.622315 5:+42732241 MsG0580026713.01.T01:CDS
TCTGTTTAGGGACATGAGAG+GGG 0.625777 5:+42731932 MsG0580026713.01.T01:CDS
CTGCCATTAACTCAGGTCGA+TGG 0.628851 5:-42732013 None:intergenic
CTGTATGCTATGGTCAAGGG+AGG 0.634721 5:+42732338 MsG0580026713.01.T01:CDS
GGAGGCTACTCTACTGGTGA+CGG 0.640287 5:+42731815 MsG0580026713.01.T01:CDS
CAAAGAGAATCGAACTGCGG+AGG 0.652528 5:+42731797 MsG0580026713.01.T01:CDS
AGGTTAAGAGAAAGTTAGCG+GGG 0.663255 5:+42732261 MsG0580026713.01.T01:CDS
GATCTGACAAGTGAAAAGGC+AGG 0.673100 5:-42731024 None:intergenic
CTGACAAGTGAAAAGGCAGG+AGG 0.690381 5:-42731021 None:intergenic
GGTTAAGAGAAAGTTAGCGG+GGG 0.720845 5:+42732262 MsG0580026713.01.T01:CDS
CTGCAAAGAGAATCGAACTG+CGG 0.726664 5:+42731794 MsG0580026713.01.T01:CDS
TGAGTACCTACTTCAATACG+AGG 0.729121 5:-42732062 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAAAACATTTATTGTTTT+TGG - Chr5:42731412-42731431 None:intergenic 10.0%
!! AATTAAGGAATATCTTAATA+AGG + Chr5:42731563-42731582 MsG0580026713.01.T01:CDS 15.0%
!! ATTAAGGAATATCTTAATAA+GGG + Chr5:42731564-42731583 MsG0580026713.01.T01:CDS 15.0%
!!! TTTTATTCTAATTTGATTAC+TGG + Chr5:42731426-42731445 MsG0580026713.01.T01:CDS 15.0%
!! AATGAAAAGGGATAAAAAAA+CGG - Chr5:42731062-42731081 None:intergenic 20.0%
!! CTTAATAAGGGAAATATTAA+GGG + Chr5:42731576-42731595 MsG0580026713.01.T01:CDS 20.0%
!! CTTATTTATATGCACTTAAA+GGG + Chr5:42731334-42731353 MsG0580026713.01.T01:CDS 20.0%
!! TCTTAATAAGGGAAATATTA+AGG + Chr5:42731575-42731594 MsG0580026713.01.T01:CDS 20.0%
!!! CACTTTTTGTTTAGTAATTA+AGG + Chr5:42731548-42731567 MsG0580026713.01.T01:CDS 20.0%
!!! TGAAAATATTTGTTGATAAG+TGG + Chr5:42732405-42732424 MsG0580026713.01.T01:CDS 20.0%
! AGTTACTTAACTATAATGAC+AGG + Chr5:42731978-42731997 MsG0580026713.01.T01:CDS 25.0%
! GAAAAAGAATGTCAGAAAAA+TGG + Chr5:42732484-42732503 MsG0580026713.01.T01:CDS 25.0%
! GCTTATTTATATGCACTTAA+AGG + Chr5:42731333-42731352 MsG0580026713.01.T01:CDS 25.0%
!! TTTTATCCCTTTTCATTCAT+GGG + Chr5:42731065-42731084 MsG0580026713.01.T01:CDS 25.0%
!! TTTTTATCCCTTTTCATTCA+TGG + Chr5:42731064-42731083 MsG0580026713.01.T01:CDS 25.0%
!!! GCTTATTGCTTTTAAGAATT+GGG + Chr5:42732511-42732530 MsG0580026713.01.T01:CDS 25.0%
AACTATAATGACAGGTTTGA+TGG + Chr5:42731986-42732005 MsG0580026713.01.T01:CDS 30.0%
AATCCAAAACTAAACACATC+AGG - Chr5:42731309-42731328 None:intergenic 30.0%
CTGTTCAAAAAGAGGTAAAA+AGG - Chr5:42731136-42731155 None:intergenic 30.0%
GATTATTGAAGCTCAGAAAT+TGG + Chr5:42731611-42731630 MsG0580026713.01.T01:CDS 30.0%
! TTTATCCCTTTTCATTCATG+GGG + Chr5:42731066-42731085 MsG0580026713.01.T01:CDS 30.0%
! TTTGATTACTGGCTATGTTA+AGG + Chr5:42731437-42731456 MsG0580026713.01.T01:CDS 30.0%
!! AAAGTTTTGATGCTTGGTTT+TGG + Chr5:42731381-42731400 MsG0580026713.01.T01:CDS 30.0%
!! ATTTTGATGTGATGATGTTG+TGG + Chr5:42732234-42732253 MsG0580026713.01.T01:CDS 30.0%
!! CGCTTATTGCTTTTAAGAAT+TGG + Chr5:42732510-42732529 MsG0580026713.01.T01:CDS 30.0%
!! GAGTTAAAAGTTTTGATGCT+TGG + Chr5:42731375-42731394 MsG0580026713.01.T01:CDS 30.0%
ACTTACTTGTCCCTGATTAA+CGG + Chr5:42732191-42732210 MsG0580026713.01.T01:CDS 35.0%
ATAAAAAGCTCAAAGTGGCT+AGG + Chr5:42732456-42732475 MsG0580026713.01.T01:CDS 35.0%
ATCAAAGTTGACGAGTCTAT+TGG + Chr5:42731645-42731664 MsG0580026713.01.T01:CDS 35.0%
CATTGATCTGACAAGTGAAA+AGG - Chr5:42731031-42731050 None:intergenic 35.0%
CGAAACATATCCGTTAATCA+GGG - Chr5:42732204-42732223 None:intergenic 35.0%
CTTGATGAGATGAATGCTTT+GGG + Chr5:42731726-42731745 MsG0580026713.01.T01:CDS 35.0%
GACACATAAAAAGCTCAAAG+TGG + Chr5:42732451-42732470 MsG0580026713.01.T01:CDS 35.0%
GAGATGATGACAAACAAGTT+TGG + Chr5:42731511-42731530 MsG0580026713.01.T01:CDS 35.0%
GATCAAATTTGACCAGAATC+TGG + Chr5:42732304-42732323 MsG0580026713.01.T01:CDS 35.0%
GTGAATGCTTGTGTTAGTAT+TGG + Chr5:42731678-42731697 MsG0580026713.01.T01:CDS 35.0%
TCTTGATGAGATGAATGCTT+TGG + Chr5:42731725-42731744 MsG0580026713.01.T01:CDS 35.0%
TTGAAGTAGGTACTCATGAT+TGG + Chr5:42732069-42732088 MsG0580026713.01.T01:CDS 35.0%
! CCTGATTAACGGATATGTTT+CGG + Chr5:42732202-42732221 MsG0580026713.01.T01:CDS 35.0%
! TAGTAGTTCAGGTCTAAAGT+TGG + Chr5:42731842-42731861 MsG0580026713.01.T01:CDS 35.0%
! TCTTTTTGAACAGAACTGCA+GGG + Chr5:42731143-42731162 MsG0580026713.01.T01:CDS 35.0%
! TGTTTCTATCAGAGCATCAT+AGG - Chr5:42731877-42731896 None:intergenic 35.0%
!! AAGCCTGATGTGTTTAGTTT+TGG + Chr5:42731303-42731322 MsG0580026713.01.T01:CDS 35.0%
!! ATCCATGCTTTTTGTAAAGC+AGG + Chr5:42732101-42732120 MsG0580026713.01.T01:CDS 35.0%
!! ATTGCTTTTAAGAATTGGGC+TGG + Chr5:42732515-42732534 MsG0580026713.01.T01:CDS 35.0%
!! TCCATGCTTTTTGTAAAGCA+GGG + Chr5:42732102-42732121 MsG0580026713.01.T01:CDS 35.0%
!!! CTGCTGTTTTCATCTTGAAT+CGG + Chr5:42731233-42731252 MsG0580026713.01.T01:CDS 35.0%
AAGAAAGCTGCCATTAACTC+AGG - Chr5:42732023-42732042 None:intergenic 40.0%
AATGGCAGCTTTCTTAGATG+AGG + Chr5:42732028-42732047 MsG0580026713.01.T01:CDS 40.0%
AGGTTAAGAGAAAGTTAGCG+GGG + Chr5:42732261-42732280 MsG0580026713.01.T01:CDS 40.0%
ATGCAAGAAGGACTTTCAGA+AGG + Chr5:42732135-42732154 MsG0580026713.01.T01:CDS 40.0%
ATTCCTGTATGCTATGGTCA+AGG + Chr5:42732334-42732353 MsG0580026713.01.T01:CDS 40.0%
CCGAAACATATCCGTTAATC+AGG - Chr5:42732205-42732224 None:intergenic 40.0%
CGAGGTTAAGAGAAAGTTAG+CGG + Chr5:42732259-42732278 MsG0580026713.01.T01:CDS 40.0%
CGATTCAAGATGAAAACAGC+AGG - Chr5:42731235-42731254 None:intergenic 40.0%
CTGATAGAAACATCCATGTC+TGG + Chr5:42731885-42731904 MsG0580026713.01.T01:CDS 40.0%
CTGCAGTTCTGTTCAAAAAG+AGG - Chr5:42731144-42731163 None:intergenic 40.0%
GACAAGTAAGTCTGGTCATT+CGG - Chr5:42732182-42732201 None:intergenic 40.0%
GAGGTTAAGAGAAAGTTAGC+GGG + Chr5:42732260-42732279 MsG0580026713.01.T01:CDS 40.0%
GTTGGAATTATGTCCAAGCT+CGG + Chr5:42731276-42731295 MsG0580026713.01.T01:CDS 40.0%
TAATCAGGGACAAGTAAGTC+TGG - Chr5:42732190-42732209 None:intergenic 40.0%
TCCCTGCTTTACAAAAAGCA+TGG - Chr5:42732106-42732125 None:intergenic 40.0%
TGAGTACCTACTTCAATACG+AGG - Chr5:42732065-42732084 None:intergenic 40.0%
TGATGCATTCCTGTATGCTA+TGG + Chr5:42732328-42732347 MsG0580026713.01.T01:CDS 40.0%
TGGTCAAATTTGATCCCCTT+CGG - Chr5:42732299-42732318 None:intergenic 40.0%
TTCCTGTATGCTATGGTCAA+GGG + Chr5:42732335-42732354 MsG0580026713.01.T01:CDS 40.0%
TTGCAGTAAGCCTTCAAGAT+CGG - Chr5:42731780-42731799 None:intergenic 40.0%
TTTCTTAGATGAGGTGGTTG+AGG + Chr5:42732037-42732056 MsG0580026713.01.T01:CDS 40.0%
! AGTCGGTCTTTTCTCTGTTT+AGG + Chr5:42731919-42731938 MsG0580026713.01.T01:CDS 40.0%
! ATTACTGGCTATGTTAAGGC+TGG + Chr5:42731441-42731460 MsG0580026713.01.T01:CDS 40.0%
! CTCTTTTTGAACAGAACTGC+AGG + Chr5:42731142-42731161 MsG0580026713.01.T01:CDS 40.0%
! GTCGGTCTTTTCTCTGTTTA+GGG + Chr5:42731920-42731939 MsG0580026713.01.T01:CDS 40.0%
!! ATGCTTTTTGTAAAGCAGGG+AGG + Chr5:42732105-42732124 MsG0580026713.01.T01:CDS 40.0%
!!! GTTGACGAGTCTATTGGTTT+TGG + Chr5:42731651-42731670 MsG0580026713.01.T01:CDS 40.0%
ACTGATGCTGACAGAGTTGT+TGG + Chr5:42731258-42731277 MsG0580026713.01.T01:CDS 45.0%
AGCTCAAAGTGGCTAGGTTA+AGG + Chr5:42732462-42732481 MsG0580026713.01.T01:CDS 45.0%
CTCTGTTTAGGGACATGAGA+GGG + Chr5:42731931-42731950 MsG0580026713.01.T01:CDS 45.0%
CTGAAAGTCTTGACCAGACA+TGG - Chr5:42731901-42731920 None:intergenic 45.0%
CTGCAAAGAGAATCGAACTG+CGG + Chr5:42731794-42731813 MsG0580026713.01.T01:CDS 45.0%
GAACCATCGACCTGAGTTAA+TGG + Chr5:42732010-42732029 MsG0580026713.01.T01:CDS 45.0%
GAGATACAAGCAAGCGTTCA+TGG + Chr5:42732427-42732446 MsG0580026713.01.T01:CDS 45.0%
GAGGATCCTCGTATTGAAGT+AGG + Chr5:42732056-42732075 MsG0580026713.01.T01:CDS 45.0%
GATCTGACAAGTGAAAAGGC+AGG - Chr5:42731027-42731046 None:intergenic 45.0%
GCATTACAAGCAGCAACATC+AGG - Chr5:42731201-42731220 None:intergenic 45.0%
GGAATGCATCAACCAGATTC+TGG - Chr5:42732319-42732338 None:intergenic 45.0%
GGTTAAGAGAAAGTTAGCGG+GGG + Chr5:42732262-42732281 MsG0580026713.01.T01:CDS 45.0%
GTCTGGTCAAGACTTTCAGT+CGG + Chr5:42731902-42731921 MsG0580026713.01.T01:CDS 45.0%
TCTCTGTTTAGGGACATGAG+AGG + Chr5:42731930-42731949 MsG0580026713.01.T01:CDS 45.0%
TCTGTTTAGGGACATGAGAG+GGG + Chr5:42731932-42731951 MsG0580026713.01.T01:CDS 45.0%
TGATGCTGTGATGCAAGTTG+TGG + Chr5:42732367-42732386 MsG0580026713.01.T01:CDS 45.0%
! ATCCCTTTTCATTCATGGGG+CGG + Chr5:42731069-42731088 MsG0580026713.01.T01:CDS 45.0%
! GATGAGATGAATGCTTTGGG+AGG + Chr5:42731729-42731748 MsG0580026713.01.T01:CDS 45.0%
! GGCTGGTGATTTAGTTTCTG+TGG + Chr5:42731458-42731477 MsG0580026713.01.T01:CDS 45.0%
! GTGACGGAGATTAGTAGTTC+AGG + Chr5:42731831-42731850 MsG0580026713.01.T01:CDS 45.0%
! TGTGATGATGTTGTGGAACG+AGG + Chr5:42732241-42732260 MsG0580026713.01.T01:CDS 45.0%
! TTCAGGTCTAAAGTTGGACG+TGG + Chr5:42731848-42731867 MsG0580026713.01.T01:CDS 45.0%
AAGAGAAAGTTAGCGGGGGA+TGG + Chr5:42732266-42732285 MsG0580026713.01.T01:CDS 50.0%
ACAGAACTGCAGGGTTGCTT+TGG + Chr5:42731152-42731171 MsG0580026713.01.T01:CDS 50.0%
AGAGAAAGTTAGCGGGGGAT+GGG + Chr5:42732267-42732286 MsG0580026713.01.T01:CDS 50.0%
ATCAGGCTTAACACCGAGCT+TGG - Chr5:42731292-42731311 None:intergenic 50.0%
CAAAGAGAATCGAACTGCGG+AGG + Chr5:42731797-42731816 MsG0580026713.01.T01:CDS 50.0%
CTCCCTTGACCATAGCATAC+AGG - Chr5:42732340-42732359 None:intergenic 50.0%
CTGACAAGTGAAAAGGCAGG+AGG - Chr5:42731024-42731043 None:intergenic 50.0%
CTGCCATTAACTCAGGTCGA+TGG - Chr5:42732016-42732035 None:intergenic 50.0%
CTGTATGCTATGGTCAAGGG+AGG + Chr5:42732338-42732357 MsG0580026713.01.T01:CDS 50.0%
GGAGGCTAGAAGATGCAAGA+AGG + Chr5:42732123-42732142 MsG0580026713.01.T01:CDS 50.0%
GGCAGCTTTCTTAGATGAGG+TGG + Chr5:42732031-42732050 MsG0580026713.01.T01:CDS 50.0%
! GGTCTATGTGCCGATCTTGA+AGG + Chr5:42731767-42731786 MsG0580026713.01.T01:CDS 50.0%
! GGTTGCTTTGGATGACAAGC+TGG + Chr5:42731164-42731183 MsG0580026713.01.T01:CDS 50.0%
!! AATGCTTTGGGAGGCTCTGT+GGG + Chr5:42731738-42731757 MsG0580026713.01.T01:CDS 50.0%
AAAGGCAGGAGGAGCAGTGT+TGG - Chr5:42731013-42731032 None:intergenic 55.0%
AACTGCGGAGGCTACTCTAC+TGG + Chr5:42731809-42731828 MsG0580026713.01.T01:CDS 55.0%
ACGCCGCCCCATGAATGAAA+AGG - Chr5:42731075-42731094 None:intergenic 55.0%
CGCCGCCCCATGAATGAAAA+GGG - Chr5:42731074-42731093 None:intergenic 55.0%
GAGAAAGTTAGCGGGGGATG+GGG + Chr5:42732268-42732287 MsG0580026713.01.T01:CDS 55.0%
GGAGGCTACTCTACTGGTGA+CGG + Chr5:42731815-42731834 MsG0580026713.01.T01:CDS 55.0%
!! GAATGCTTTGGGAGGCTCTG+TGG + Chr5:42731737-42731756 MsG0580026713.01.T01:CDS 55.0%
AAGTTAGCGGGGGATGGGGA+TGG + Chr5:42732272-42732291 MsG0580026713.01.T01:CDS 60.0%
AGTTAGCGGGGGATGGGGAT+GGG + Chr5:42732273-42732292 MsG0580026713.01.T01:CDS 60.0%
TAGGGACATGAGAGGGGCGA+GGG + Chr5:42731938-42731957 MsG0580026713.01.T01:CDS 60.0%
TGGGAGGCTCTGTGGGACTT+GGG + Chr5:42731745-42731764 MsG0580026713.01.T01:CDS 60.0%
TTAGGGACATGAGAGGGGCG+AGG + Chr5:42731937-42731956 MsG0580026713.01.T01:CDS 60.0%
TTGGGAGGCTCTGTGGGACT+TGG + Chr5:42731744-42731763 MsG0580026713.01.T01:CDS 60.0%
! GGTCATTCGGCTCGAAGTGC+AGG - Chr5:42732169-42732188 None:intergenic 60.0%
GGGAGGCTCTGTGGGACTTG+GGG + Chr5:42731746-42731765 MsG0580026713.01.T01:CDS 65.0%
! GGCAGGAGGAGCAGTGTTGG+CGG - Chr5:42731010-42731029 None:intergenic 65.0%
GGGATGGGGATGGGCCGAAG+GGG + Chr5:42732282-42732301 MsG0580026713.01.T01:CDS 70.0%
GGGGATGGGGATGGGCCGAA+GGG + Chr5:42732281-42732300 MsG0580026713.01.T01:CDS 70.0%
GGGGGATGGGGATGGGCCGA+AGG + Chr5:42732280-42732299 MsG0580026713.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 42731000 42732550 42731000 ID=MsG0580026713.01;Name=MsG0580026713.01
Chr5 mRNA 42731000 42732550 42731000 ID=MsG0580026713.01.T01;Parent=MsG0580026713.01;Name=MsG0580026713.01.T01;_AED=0.22;_eAED=0.22;_QI=0|-1|0|1|-1|1|1|0|516
Chr5 exon 42731000 42732550 42731000 ID=MsG0580026713.01.T01:exon:13436;Parent=MsG0580026713.01.T01
Chr5 CDS 42731000 42732550 42731000 ID=MsG0580026713.01.T01:cds;Parent=MsG0580026713.01.T01
Gene Sequence

>MsG0580026713.01.T01

ATGAAATCCGCCAACACTGCTCCTCCTGCCTTTTCACTTGTCAGATCAATGTTCAAATACCGTTTTTTTATCCCTTTTCATTCATGGGGCGGCGTGCTCGTTGATATTGCTAGAAACAATGACAATCTTGCTGCCTTTTTACCTCTTTTTGAACAGAACTGCAGGGTTGCTTTGGATGACAAGCTGGACTTTATGATACCTGATGTTGCTGCTTGTAATGCTGCTCTTGAAGCCTGCTGTTTTCATCTTGAATCGGTAACTGATGCTGACAGAGTTGTTGGAATTATGTCCAAGCTCGGTGTTAAGCCTGATGTGTTTAGTTTTGGATTTCTTGCTTATTTATATGCACTTAAAGGGTTACAAGATAAGATAGATGAGTTAAAAGTTTTGATGCTTGGTTTTGGTTACTCCAAAAACAATAAATGTTTTTATTCTAATTTGATTACTGGCTATGTTAAGGCTGGTGATTTAGTTTCTGTGGAGTCGACAATTCTTAGTAGTTTGAATGATAGAGATGATGACAAACAAGTTTGGAATTTCGACAGAGACACTTTTTGTTTAGTAATTAAGGAATATCTTAATAAGGGAAATATTAAGGGTTTAGCTAATTTGATTATTGAAGCTCAGAAATTGGAGTCTTCGAATATCAAAGTTGACGAGTCTATTGGTTTTGGTATTGTGAATGCTTGTGTTAGTATTGGACTATCAGACAAAGCACACAGCATTCTTGATGAGATGAATGCTTTGGGAGGCTCTGTGGGACTTGGGGTCTATGTGCCGATCTTGAAGGCTTACTGCAAAGAGAATCGAACTGCGGAGGCTACTCTACTGGTGACGGAGATTAGTAGTTCAGGTCTAAAGTTGGACGTGGAAACCTATGATGCTCTGATAGAAACATCCATGTCTGGTCAAGACTTTCAGTCGGTCTTTTCTCTGTTTAGGGACATGAGAGGGGCGAGGGTTCTTGATTTGAAAGTGAGTTACTTAACTATAATGACAGGTTTGATGGAGAACCATCGACCTGAGTTAATGGCAGCTTTCTTAGATGAGGTGGTTGAGGATCCTCGTATTGAAGTAGGTACTCATGATTGGAATTCTATAATCCATGCTTTTTGTAAAGCAGGGAGGCTAGAAGATGCAAGAAGGACTTTCAGAAGGATGACATTCCTGCACTTCGAGCCGAATGACCAGACTTACTTGTCCCTGATTAACGGATATGTTTCGGCAGAGAAATATTTTGATGTGATGATGTTGTGGAACGAGGTTAAGAGAAAGTTAGCGGGGGATGGGGATGGGCCGAAGGGGATCAAATTTGACCAGAATCTGGTTGATGCATTCCTGTATGCTATGGTCAAGGGAGGTTTCTTTGATGCTGTGATGCAAGTTGTGGAGAAATCTAAAGAGATGAAAATATTTGTTGATAAGTGGAGATACAAGCAAGCGTTCATGGAGACACATAAAAAGCTCAAAGTGGCTAGGTTAAGGAAAAAGAATGTCAGAAAAATGGAAGCGCTTATTGCTTTTAAGAATTGGGCTGGCTTAAATGCATGA

Protein sequence

>MsG0580026713.01.T01

MKSANTAPPAFSLVRSMFKYRFFIPFHSWGGVLVDIARNNDNLAAFLPLFEQNCRVALDDKLDFMIPDVAACNAALEACCFHLESVTDADRVVGIMSKLGVKPDVFSFGFLAYLYALKGLQDKIDELKVLMLGFGYSKNNKCFYSNLITGYVKAGDLVSVESTILSSLNDRDDDKQVWNFDRDTFCLVIKEYLNKGNIKGLANLIIEAQKLESSNIKVDESIGFGIVNACVSIGLSDKAHSILDEMNALGGSVGLGVYVPILKAYCKENRTAEATLLVTEISSSGLKLDVETYDALIETSMSGQDFQSVFSLFRDMRGARVLDLKVSYLTIMTGLMENHRPELMAAFLDEVVEDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMTFLHFEPNDQTYLSLINGYVSAEKYFDVMMLWNEVKRKLAGDGDGPKGIKFDQNLVDAFLYAMVKGGFFDAVMQVVEKSKEMKIFVDKWRYKQAFMETHKKLKVARLRKKNVRKMEALIAFKNWAGLNA*