Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046366.01.T01 | XP_003608915.1 | 99.694 | 327 | 1 | 0 | 16 | 342 | 45 | 371 | 0 | 674 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046366.01.T01 | Q9SXC9 | 82.675 | 329 | 57 | 0 | 14 | 342 | 43 | 371 | 0 | 578 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046366.01.T01 | G7JNQ9 | 99.694 | 327 | 1 | 0 | 16 | 342 | 45 | 371 | 0.0 | 674 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047825.01 | MsG0880046366.01 | 0.817686 | 2.899270e-52 | 2.125790e-49 |
| MsG0080048765.01 | MsG0880046366.01 | 0.808798 | 2.594454e-50 | 1.497401e-47 |
| MsG0180000042.01 | MsG0880046366.01 | 0.810212 | 1.289687e-50 | 7.727514e-48 |
| MsG0180000100.01 | MsG0880046366.01 | 0.803491 | 3.399378e-49 | 1.710603e-46 |
| MsG0180000475.01 | MsG0880046366.01 | 0.823860 | 1.103351e-53 | 9.614756e-51 |
| MsG0180000494.01 | MsG0880046366.01 | 0.808802 | 2.589632e-50 | 1.494774e-47 |
| MsG0180000555.01 | MsG0880046366.01 | 0.829391 | 5.283380e-55 | 5.400420e-52 |
| MsG0180000585.01 | MsG0880046366.01 | 0.800363 | 1.492464e-48 | 6.936325e-46 |
| MsG0180000741.01 | MsG0880046366.01 | 0.847773 | 9.352075e-60 | 1.679953e-56 |
| MsG0180000797.01 | MsG0880046366.01 | 0.816920 | 4.311275e-52 | 3.095505e-49 |
| MsG0180000855.01 | MsG0880046366.01 | 0.831135 | 1.982191e-55 | 2.131677e-52 |
| MsG0180001312.01 | MsG0880046366.01 | 0.831030 | 2.102889e-55 | 2.254425e-52 |
| MsG0180001911.01 | MsG0880046366.01 | 0.803779 | 2.961832e-49 | 1.501482e-46 |
| MsG0180002071.01 | MsG0880046366.01 | 0.858411 | 8.394527e-63 | 2.140524e-59 |
| MsG0180002709.01 | MsG0880046366.01 | 0.822769 | 1.983815e-53 | 1.676263e-50 |
| MsG0880044573.01 | MsG0880046366.01 | 0.814242 | 1.702239e-51 | 1.136159e-48 |
| MsG0880044732.01 | MsG0880046366.01 | 0.809194 | 2.134962e-50 | 1.245375e-47 |
| MsG0880045415.01 | MsG0880046366.01 | 0.801799 | 7.591769e-49 | 3.658824e-46 |
| MsG0880045448.01 | MsG0880046366.01 | 0.812447 | 4.220976e-51 | 2.684559e-48 |
| MsG0880045450.01 | MsG0880046366.01 | 0.802430 | 5.630751e-49 | 2.757767e-46 |
| MsG0880045639.01 | MsG0880046366.01 | 0.809954 | 1.465519e-50 | 8.722891e-48 |
| MsG0880045936.01 | MsG0880046366.01 | 0.819153 | 1.348446e-52 | 1.029439e-49 |
| MsG0880046366.01 | MsG0880047019.01 | 0.810668 | 1.027851e-50 | 6.234090e-48 |
| MsG0880046366.01 | MsG0880047497.01 | 0.800216 | 1.598989e-48 | 7.403612e-46 |
| MsG0880046366.01 | MsG0880047745.01 | 0.830889 | 2.277343e-55 | 2.431479e-52 |
| MsG0180002952.01 | MsG0880046366.01 | 0.828039 | 1.122015e-54 | 1.102397e-51 |
| MsG0180002955.01 | MsG0880046366.01 | 0.814299 | 1.653448e-51 | 1.105330e-48 |
| MsG0180003444.01 | MsG0880046366.01 | 0.807006 | 6.240714e-50 | 3.437103e-47 |
| MsG0180003807.01 | MsG0880046366.01 | 0.826272 | 2.971687e-54 | 2.773798e-51 |
| MsG0180003810.01 | MsG0880046366.01 | 0.823274 | 1.512656e-53 | 1.296422e-50 |
| MsG0180004372.01 | MsG0880046366.01 | 0.812881 | 3.391149e-51 | 2.181421e-48 |
| MsG0180004385.01 | MsG0880046366.01 | 0.815408 | 9.389186e-52 | 6.467873e-49 |
| MsG0180004437.01 | MsG0880046366.01 | 0.802023 | 6.827924e-49 | 3.309464e-46 |
| MsG0180004598.01 | MsG0880046366.01 | 0.804735 | 1.872903e-49 | 9.731785e-47 |
| MsG0180004797.01 | MsG0880046366.01 | 0.810478 | 1.129855e-50 | 6.817815e-48 |
| MsG0180005160.01 | MsG0880046366.01 | 0.805411 | 1.352141e-49 | 7.148627e-47 |
| MsG0180005185.01 | MsG0880046366.01 | 0.810746 | 9.886544e-51 | 6.008860e-48 |
| MsG0180005304.01 | MsG0880046366.01 | 0.835274 | 1.845570e-56 | 2.246026e-53 |
| MsG0180006207.01 | MsG0880046366.01 | 0.821209 | 4.560419e-53 | 3.686763e-50 |
| MsG0280006367.01 | MsG0880046366.01 | 0.810308 | 1.229871e-50 | 7.387772e-48 |
| MsG0780040788.01 | MsG0880046366.01 | 0.827370 | 1.624051e-54 | 1.565029e-51 |
| MsG0780041033.01 | MsG0880046366.01 | 0.832997 | 6.866524e-56 | 7.804671e-53 |
| MsG0780041671.01 | MsG0880046366.01 | 0.815010 | 1.150934e-51 | 7.842915e-49 |
| MsG0880042161.01 | MsG0880046366.01 | 0.814710 | 1.341240e-51 | 9.065789e-49 |
| MsG0880042329.01 | MsG0880046366.01 | 0.800813 | 1.208457e-48 | 5.680456e-46 |
| MsG0880042965.01 | MsG0880046366.01 | 0.801021 | 1.096123e-48 | 5.180208e-46 |
| MsG0880043522.01 | MsG0880046366.01 | 0.828478 | 8.790731e-55 | 8.748067e-52 |
| MsG0280010816.01 | MsG0880046366.01 | 0.836981 | 6.803737e-57 | 8.715318e-54 |
| MsG0280010932.01 | MsG0880046366.01 | 0.803078 | 4.139376e-49 | 2.060865e-46 |
| MsG0280010976.01 | MsG0880046366.01 | 0.815493 | 8.986123e-52 | 6.205201e-49 |
| MsG0280011131.01 | MsG0880046366.01 | 0.817199 | 3.733054e-52 | 2.700796e-49 |
| MsG0280011201.01 | MsG0880046366.01 | 0.818149 | 2.278626e-52 | 1.692077e-49 |
| MsG0280011293.01 | MsG0880046366.01 | 0.816832 | 4.512248e-52 | 3.231937e-49 |
| MsG0280011334.01 | MsG0880046366.01 | 0.800373 | 1.485693e-48 | 6.906627e-46 |
| MsG0280011410.01 | MsG0880046366.01 | 0.820563 | 6.421748e-53 | 5.098659e-50 |
| MsG0380012020.01 | MsG0880046366.01 | 0.811630 | 6.359101e-51 | 3.956111e-48 |
| MsG0380012362.01 | MsG0880046366.01 | 0.815776 | 7.774782e-52 | 5.410571e-49 |
| MsG0380012365.01 | MsG0880046366.01 | 0.806101 | 9.688856e-50 | 5.213780e-47 |
| MsG0380012458.01 | MsG0880046366.01 | 0.802028 | 6.811662e-49 | 3.302022e-46 |
| MsG0380014880.01 | MsG0880046366.01 | 0.811493 | 6.809925e-51 | 4.221688e-48 |
| MsG0680033302.01 | MsG0880046366.01 | 0.804291 | 2.317884e-49 | 1.190613e-46 |
| MsG0680034757.01 | MsG0880046366.01 | 0.814269 | 1.678869e-51 | 1.121381e-48 |
| MsG0480018640.01 | MsG0880046366.01 | 0.804460 | 2.136966e-49 | 1.102446e-46 |
| MsG0480018778.01 | MsG0880046366.01 | 0.804433 | 2.165576e-49 | 1.116393e-46 |
| MsG0480019035.01 | MsG0880046366.01 | 0.804090 | 2.551960e-49 | 1.304136e-46 |
| MsG0480019037.01 | MsG0880046366.01 | 0.813781 | 2.151614e-51 | 1.418181e-48 |
| MsG0480019289.01 | MsG0880046366.01 | 0.841195 | 5.504304e-58 | 8.026584e-55 |
| MsG0480019335.01 | MsG0880046366.01 | 0.800051 | 1.727623e-48 | 7.965557e-46 |
| MsG0480019970.01 | MsG0880046366.01 | 0.813793 | 2.138143e-51 | 1.409797e-48 |
| MsG0480020505.01 | MsG0880046366.01 | 0.811835 | 5.737488e-51 | 3.588945e-48 |
| MsG0480020540.01 | MsG0880046366.01 | 0.825356 | 4.901350e-54 | 4.456949e-51 |
| MsG0480020719.01 | MsG0880046366.01 | 0.819567 | 1.085251e-52 | 8.381581e-50 |
| MsG0480020992.01 | MsG0880046366.01 | 0.803695 | 3.083743e-49 | 1.559914e-46 |
| MsG0480021534.01 | MsG0880046366.01 | 0.814877 | 1.231357e-51 | 8.360406e-49 |
| MsG0480021784.01 | MsG0880046366.01 | 0.827777 | 1.297224e-54 | 1.264670e-51 |
| MsG0480021900.01 | MsG0880046366.01 | 0.867224 | 1.601781e-65 | 5.550099e-62 |
| MsG0480022169.01 | MsG0880046366.01 | 0.838882 | 2.208564e-57 | 2.998441e-54 |
| MsG0480022318.01 | MsG0880046366.01 | 0.801862 | 7.369064e-49 | 3.557295e-46 |
| MsG0480022451.01 | MsG0880046366.01 | 0.803916 | 2.773563e-49 | 1.411124e-46 |
| MsG0480022552.01 | MsG0880046366.01 | 0.824338 | 8.519413e-54 | 7.524152e-51 |
| MsG0480022597.01 | MsG0880046366.01 | 0.810443 | 1.149840e-50 | 6.931801e-48 |
| MsG0480022598.01 | MsG0880046366.01 | 0.817990 | 2.476058e-52 | 1.830651e-49 |
| MsG0480023659.01 | MsG0880046366.01 | 0.811153 | 8.073774e-51 | 4.960195e-48 |
| MsG0480023670.01 | MsG0880046366.01 | 0.807501 | 4.901841e-50 | 2.734772e-47 |
| MsG0480023718.01 | MsG0880046366.01 | 0.803505 | 3.376972e-49 | 1.699963e-46 |
| MsG0480023873.01 | MsG0880046366.01 | 0.804926 | 1.708132e-49 | 8.919567e-47 |
| MsG0580024114.01 | MsG0880046366.01 | 0.833747 | 4.465902e-56 | 5.190589e-53 |
| MsG0580024157.01 | MsG0880046366.01 | 0.808549 | 2.933097e-50 | 1.681948e-47 |
| MsG0580024304.01 | MsG0880046366.01 | 0.828284 | 9.795571e-55 | 9.692413e-52 |
| MsG0580024581.01 | MsG0880046366.01 | 0.827022 | 1.967652e-54 | 1.876591e-51 |
| MsG0580024632.01 | MsG0880046366.01 | 0.801590 | 8.378994e-49 | 4.016810e-46 |
| MsG0580024682.01 | MsG0880046366.01 | 0.807898 | 4.037190e-50 | 2.275627e-47 |
| MsG0580024733.01 | MsG0880046366.01 | 0.811473 | 6.878919e-51 | 4.262154e-48 |
| MsG0580024960.01 | MsG0880046366.01 | 0.830791 | 2.407213e-55 | 2.562660e-52 |
| MsG0580025008.01 | MsG0880046366.01 | 0.807552 | 4.779699e-50 | 2.670059e-47 |
| MsG0580025009.01 | MsG0880046366.01 | 0.834095 | 3.654564e-56 | 4.292462e-53 |
| MsG0580025025.01 | MsG0880046366.01 | 0.801671 | 8.067859e-49 | 3.875545e-46 |
| MsG0580025184.01 | MsG0880046366.01 | 0.815905 | 7.274425e-52 | 5.079718e-49 |
| MsG0580025758.01 | MsG0880046366.01 | 0.810005 | 1.429368e-50 | 8.519127e-48 |
| MsG0580025807.01 | MsG0880046366.01 | 0.802703 | 4.945932e-49 | 2.439242e-46 |
| MsG0580025900.01 | MsG0880046366.01 | 0.809979 | 1.447332e-50 | 8.620409e-48 |
| MsG0580025907.01 | MsG0880046366.01 | 0.849472 | 3.163336e-60 | 6.003107e-57 |
| MsG0380015436.01 | MsG0880046366.01 | 0.813953 | 1.971486e-51 | 1.305531e-48 |
| MsG0380015614.01 | MsG0880046366.01 | 0.828297 | 9.722705e-55 | 9.623858e-52 |
| MsG0380015702.01 | MsG0880046366.01 | 0.823166 | 1.603346e-53 | 1.369975e-50 |
| MsG0380015980.01 | MsG0880046366.01 | 0.843332 | 1.495179e-58 | 2.331868e-55 |
| MsG0380016209.01 | MsG0880046366.01 | 0.829671 | 4.517963e-55 | 4.655814e-52 |
| MsG0380016753.01 | MsG0880046366.01 | 0.810861 | 9.337836e-51 | 5.692863e-48 |
| MsG0380016859.01 | MsG0880046366.01 | 0.813974 | 1.950136e-51 | 1.292137e-48 |
| MsG0380017040.01 | MsG0880046366.01 | 0.800036 | 1.739886e-48 | 8.018999e-46 |
| MsG0380017055.01 | MsG0880046366.01 | 0.802253 | 6.125454e-49 | 2.986448e-46 |
| MsG0380017210.01 | MsG0880046366.01 | 0.811326 | 7.404863e-51 | 4.569814e-48 |
| MsG0380017229.01 | MsG0880046366.01 | 0.804101 | 2.538630e-49 | 1.297660e-46 |
| MsG0380017232.01 | MsG0880046366.01 | 0.812444 | 4.226039e-51 | 2.687628e-48 |
| MsG0380017233.01 | MsG0880046366.01 | 0.800471 | 1.419372e-48 | 6.614251e-46 |
| MsG0380017401.01 | MsG0880046366.01 | 0.802158 | 6.405837e-49 | 3.115618e-46 |
| MsG0380017452.01 | MsG0880046366.01 | 0.809183 | 2.145603e-50 | 1.251245e-47 |
| MsG0380017528.01 | MsG0880046366.01 | 0.830953 | 2.196198e-55 | 2.349210e-52 |
| MsG0480018251.01 | MsG0880046366.01 | 0.819680 | 1.022853e-52 | 7.924247e-50 |
| MsG0580029208.01 | MsG0880046366.01 | 0.826269 | 2.976080e-54 | 2.777673e-51 |
| MsG0580029622.01 | MsG0880046366.01 | 0.806894 | 6.589690e-50 | 3.618820e-47 |
| MsG0580029629.01 | MsG0880046366.01 | 0.806777 | 6.977495e-50 | 3.820120e-47 |
| MsG0580029639.01 | MsG0880046366.01 | 0.840777 | 7.088229e-58 | 1.020366e-54 |
| MsG0580029647.01 | MsG0880046366.01 | 0.805020 | 1.632939e-49 | 8.546776e-47 |
| MsG0580029651.01 | MsG0880046366.01 | 0.803523 | 3.347430e-49 | 1.685930e-46 |
| MsG0680030321.01 | MsG0880046366.01 | 0.803017 | 4.260251e-49 | 2.117758e-46 |
| MsG0280006462.01 | MsG0880046366.01 | 0.804020 | 2.639823e-49 | 1.346579e-46 |
| MsG0280006692.01 | MsG0880046366.01 | 0.801192 | 1.011305e-48 | 4.799736e-46 |
| MsG0280007048.01 | MsG0880046366.01 | 0.830549 | 2.758907e-55 | 2.915961e-52 |
| MsG0280007564.01 | MsG0880046366.01 | 0.806957 | 6.391829e-50 | 3.515850e-47 |
| MsG0280007691.01 | MsG0880046366.01 | 0.823714 | 1.193835e-53 | 1.036141e-50 |
| MsG0280007818.01 | MsG0880046366.01 | 0.816144 | 6.432336e-52 | 4.521472e-49 |
| MsG0280007819.01 | MsG0880046366.01 | 0.815680 | 8.167030e-52 | 5.668396e-49 |
| MsG0280007826.01 | MsG0880046366.01 | 0.823536 | 1.313740e-53 | 1.134290e-50 |
| MsG0280008030.01 | MsG0880046366.01 | 0.832103 | 1.144100e-55 | 1.266090e-52 |
| MsG0280008363.01 | MsG0880046366.01 | 0.804861 | 1.762822e-49 | 9.189495e-47 |
| MsG0280009748.01 | MsG0880046366.01 | 0.802696 | 4.963299e-49 | 2.447328e-46 |
| MsG0280010109.01 | MsG0880046366.01 | 0.807738 | 4.365986e-50 | 2.450867e-47 |
| MsG0780036548.01 | MsG0880046366.01 | 0.804025 | 2.633463e-49 | 1.343516e-46 |
| MsG0780036635.01 | MsG0880046366.01 | 0.801726 | 7.859211e-49 | 3.780566e-46 |
| MsG0780036773.01 | MsG0880046366.01 | 0.812186 | 4.812091e-51 | 3.038912e-48 |
| MsG0780036836.01 | MsG0880046366.01 | 0.800136 | 1.660705e-48 | 7.673492e-46 |
| MsG0780036950.01 | MsG0880046366.01 | 0.814847 | 1.250828e-51 | 8.485986e-49 |
| MsG0780037630.01 | MsG0880046366.01 | 0.828745 | 7.577115e-55 | 7.598189e-52 |
| MsG0780037975.01 | MsG0880046366.01 | 0.811108 | 8.256141e-51 | 5.066305e-48 |
| MsG0780038092.01 | MsG0880046366.01 | 0.854596 | 1.108111e-61 | 2.487836e-58 |
| MsG0780038602.01 | MsG0880046366.01 | 0.804338 | 2.265982e-49 | 1.165344e-46 |
| MsG0780038644.01 | MsG0880046366.01 | 0.832607 | 8.584372e-56 | 9.643298e-53 |
| MsG0780039655.01 | MsG0880046366.01 | 0.806403 | 8.368530e-50 | 4.537991e-47 |
| MsG0780039717.01 | MsG0880046366.01 | 0.829316 | 5.511384e-55 | 5.621739e-52 |
| MsG0780039777.01 | MsG0880046366.01 | 0.833004 | 6.840993e-56 | 7.777004e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046366.01.T01 | MTR_4g106370 | 99.694 | 327 | 1 | 0 | 16 | 342 | 45 | 371 | 0.0 | 674 |
| MsG0880046366.01.T01 | MTR_1g076280 | 46.526 | 331 | 161 | 2 | 13 | 342 | 52 | 367 | 3.97e-102 | 311 |
| MsG0880046366.01.T01 | MTR_1g076280 | 46.526 | 331 | 161 | 2 | 13 | 342 | 52 | 367 | 2.50e-101 | 311 |
| MsG0880046366.01.T01 | MTR_4g127310 | 33.876 | 307 | 162 | 7 | 18 | 312 | 123 | 400 | 6.17e-36 | 137 |
| MsG0880046366.01.T01 | MTR_4g008140 | 33.077 | 260 | 139 | 5 | 18 | 271 | 118 | 348 | 3.88e-30 | 120 |
| MsG0880046366.01.T01 | MTR_2g019520 | 30.364 | 247 | 151 | 6 | 14 | 254 | 142 | 373 | 5.25e-23 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046366.01.T01 | AT1G27520 | 82.675 | 329 | 57 | 0 | 14 | 342 | 43 | 371 | 0.0 | 578 |
| MsG0880046366.01.T01 | AT5G43710 | 47.401 | 327 | 157 | 1 | 16 | 342 | 48 | 359 | 1.78e-104 | 318 |
| MsG0880046366.01.T01 | AT5G43710 | 47.401 | 327 | 157 | 1 | 16 | 342 | 48 | 359 | 2.28e-104 | 317 |
| MsG0880046366.01.T01 | AT5G43710 | 47.401 | 327 | 157 | 1 | 16 | 342 | 48 | 359 | 6.59e-104 | 318 |
| MsG0880046366.01.T01 | AT1G51590 | 30.744 | 309 | 170 | 7 | 18 | 312 | 3 | 281 | 4.89e-33 | 127 |
| MsG0880046366.01.T01 | AT3G21160 | 30.449 | 312 | 174 | 7 | 14 | 312 | 104 | 385 | 7.49e-33 | 126 |
| MsG0880046366.01.T01 | AT1G51590 | 30.323 | 310 | 178 | 5 | 14 | 312 | 103 | 385 | 7.62e-33 | 128 |
| MsG0880046366.01.T01 | AT3G21160 | 30.449 | 312 | 174 | 7 | 14 | 312 | 104 | 385 | 7.79e-32 | 125 |
| MsG0880046366.01.T01 | AT1G30000 | 27.899 | 276 | 175 | 6 | 14 | 280 | 134 | 394 | 2.15e-24 | 104 |
| MsG0880046366.01.T01 | AT1G30000 | 27.899 | 276 | 175 | 6 | 14 | 280 | 154 | 414 | 2.37e-24 | 104 |
Find 71 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAGCTTATTAAAATTATT+TGG | 0.138671 | 8:-72442756 | MsG0880046366.01.T01:CDS |
| CTAGGTCTGGCTGAAGATTT+AGG | 0.168345 | 8:-72443472 | MsG0880046366.01.T01:CDS |
| TGTCTCTAGCCTTGTGATTA+TGG | 0.191008 | 8:-72443854 | MsG0880046366.01.T01:intron |
| TTACAAGTCTTCAAGCATTT+TGG | 0.214205 | 8:-72442160 | MsG0880046366.01.T01:CDS |
| CAAAGCTACTGATTCATATA+TGG | 0.216423 | 8:+72442806 | None:intergenic |
| CAGTGCAACATTAGAGTTCT+TGG | 0.232535 | 8:-72443571 | MsG0880046366.01.T01:CDS |
| ACTTGTCTCTGCTCATTTAC+TGG | 0.263189 | 8:-72443545 | MsG0880046366.01.T01:CDS |
| TTCTACGTGTGGAAGAAATT+TGG | 0.272852 | 8:-72441995 | MsG0880046366.01.T01:CDS |
| TTATATGACTCATGCATTTC+CGG | 0.281176 | 8:-72444275 | MsG0880046366.01.T01:intron |
| ACGTAAACCAGGTTCTTATT+GGG | 0.283532 | 8:-72442054 | MsG0880046366.01.T01:intron |
| TACGTAAACCAGGTTCTTAT+TGG | 0.291437 | 8:-72442055 | MsG0880046366.01.T01:intron |
| GTCTCTAGCCTTGTGATTAT+GGG | 0.325807 | 8:-72443853 | MsG0880046366.01.T01:intron |
| ATTGAACATTCTTCAGGAAT+TGG | 0.326359 | 8:-72442702 | MsG0880046366.01.T01:CDS |
| ACCACACTTGACGTGTCAAC+TGG | 0.332248 | 8:-72442732 | MsG0880046366.01.T01:CDS |
| GGACAGGAAGAGCAACTTAT+TGG | 0.332779 | 8:-72442187 | MsG0880046366.01.T01:CDS |
| CAATGGATTGAACATTCTTC+AGG | 0.350257 | 8:-72442708 | MsG0880046366.01.T01:CDS |
| AGGTTCATTGATTCTTGAAA+TGG | 0.373428 | 8:-72442856 | MsG0880046366.01.T01:CDS |
| ACTACAGAAACAAGCACTTC+AGG | 0.379145 | 8:-72442967 | MsG0880046366.01.T01:CDS |
| AAAGCTACTGATTCATATAT+GGG | 0.379529 | 8:+72442807 | None:intergenic |
| TCAAATTTCCCAGCTCACTT+AGG | 0.392312 | 8:+72444141 | None:intergenic |
| CAAATTTCCCAGCTCACTTA+GGG | 0.414649 | 8:+72444142 | None:intergenic |
| TTTAAGTAGATATTCATAGA+AGG | 0.415298 | 8:+72442445 | None:intergenic |
| CACTGATTCCCTAAGTGAGC+TGG | 0.416183 | 8:-72444150 | MsG0880046366.01.T01:CDS |
| TAGGTCTGGCTGAAGATTTA+GGG | 0.425603 | 8:-72443471 | MsG0880046366.01.T01:CDS |
| GCGCACTCCCTTCTCGAATT+CGG | 0.428787 | 8:+72443822 | None:intergenic |
| CCAGCGTTCAATACGCCTAC+TGG | 0.437081 | 8:-72443436 | MsG0880046366.01.T01:CDS |
| CAAGAATGAGCTACTAGGTC+TGG | 0.452439 | 8:-72443485 | MsG0880046366.01.T01:CDS |
| ATGAGTCATATAATTGTCAT+AGG | 0.456794 | 8:+72444285 | None:intergenic |
| AAGTGAGCTGGGAAATTTGA+AGG | 0.467826 | 8:-72444138 | MsG0880046366.01.T01:intron |
| AATAGTCCTCCTTTCCGAAA+AGG | 0.473341 | 8:+72442414 | None:intergenic |
| TTCAAGTTAATCCATGCATA+TGG | 0.478317 | 8:+72443409 | None:intergenic |
| TAAATCAGAAAATACCTCTC+TGG | 0.483235 | 8:+72441965 | None:intergenic |
| CTACAGAAACAAGCACTTCA+GGG | 0.486365 | 8:-72442966 | MsG0880046366.01.T01:CDS |
| CTGTCCTCATATCAGCTTCG+TGG | 0.486665 | 8:+72442204 | None:intergenic |
| GGTTCATTGATTCTTGAAAT+GGG | 0.488852 | 8:-72442855 | MsG0880046366.01.T01:CDS |
| ATATGCATGGATTAACTTGA+AGG | 0.496506 | 8:-72443407 | MsG0880046366.01.T01:intron |
| CGCTAATTGAATCGCTGTCT+AGG | 0.496930 | 8:-72443994 | MsG0880046366.01.T01:intron |
| TCTTACAAGAATGAGCTACT+AGG | 0.503182 | 8:-72443490 | MsG0880046366.01.T01:CDS |
| TGCGAGCTCTCCGTAAGCTA+TGG | 0.517528 | 8:-72442785 | MsG0880046366.01.T01:CDS |
| CATTCTTCAGGAATTGGAGC+TGG | 0.524928 | 8:-72442696 | MsG0880046366.01.T01:intron |
| CGTAAACCAGGTTCTTATTG+GGG | 0.524995 | 8:-72442053 | MsG0880046366.01.T01:intron |
| TCTGCATACTCCATAGCTTA+CGG | 0.531709 | 8:+72442775 | None:intergenic |
| ACTGATTCCCTAAGTGAGCT+GGG | 0.535576 | 8:-72444149 | MsG0880046366.01.T01:CDS |
| TCTTCAAAGAAGTTGCTACA+AGG | 0.539072 | 8:-72443514 | MsG0880046366.01.T01:CDS |
| TTGACGTGTCAACTGGGCAA+TGG | 0.555056 | 8:-72442725 | MsG0880046366.01.T01:CDS |
| CCACACTTGACGTGTCAACT+GGG | 0.556230 | 8:-72442731 | MsG0880046366.01.T01:CDS |
| TGCAACATTAGAGTTCTTGG+AGG | 0.558005 | 8:-72443568 | MsG0880046366.01.T01:CDS |
| AGCATTTCAGACACGGTCCC+TGG | 0.561619 | 8:-72442355 | MsG0880046366.01.T01:intron |
| GGTACCACGAAGCTGATATG+AGG | 0.564413 | 8:-72442208 | MsG0880046366.01.T01:CDS |
| CAGCTACTAACCTGTAGGCC+AGG | 0.565457 | 8:+72442137 | None:intergenic |
| CAACAATACCGAATTCGAGA+AGG | 0.577874 | 8:-72443830 | MsG0880046366.01.T01:CDS |
| CCCAGTTGACACGTCAAGTG+TGG | 0.580623 | 8:+72442731 | None:intergenic |
| ATGTGCACAGTATGGAGTAA+TGG | 0.581203 | 8:-72442998 | MsG0880046366.01.T01:intron |
| GAAACAAGCACTTCAGGGTG+TGG | 0.588136 | 8:-72442961 | MsG0880046366.01.T01:intron |
| CACGAAGCTGATATGAGGAC+AGG | 0.593610 | 8:-72442203 | MsG0880046366.01.T01:CDS |
| CATGCATATGGTAATCCAGT+AGG | 0.607275 | 8:+72443421 | None:intergenic |
| AACAATACCGAATTCGAGAA+GGG | 0.609136 | 8:-72443829 | MsG0880046366.01.T01:CDS |
| ACCGTGAGTTCTTCTACGTG+TGG | 0.609422 | 8:-72442006 | MsG0880046366.01.T01:CDS |
| TCATATAATTGTCATAGGCA+TGG | 0.618430 | 8:+72444290 | None:intergenic |
| GCAGAGCCATTGTAGTCTTG+CGG | 0.619348 | 8:+72444022 | None:intergenic |
| AATTCGAGAAGGGAGTGCGC+TGG | 0.622257 | 8:-72443819 | MsG0880046366.01.T01:CDS |
| CTACTGGATTACCATATGCA+TGG | 0.624896 | 8:-72443420 | MsG0880046366.01.T01:CDS |
| TAACTATTGACTATGGAGAG+AGG | 0.625185 | 8:-72446025 | MsG0880046366.01.T01:intron |
| GTGCAGAAGCATTTCAGACA+CGG | 0.630456 | 8:-72442362 | MsG0880046366.01.T01:CDS |
| GGTGCTTTATCAAAACTGAC+TGG | 0.643205 | 8:-72442834 | MsG0880046366.01.T01:CDS |
| TCCACACGTAGAAGAACTCA+CGG | 0.649793 | 8:+72442005 | None:intergenic |
| CCAGTAGGCGTATTGAACGC+TGG | 0.652163 | 8:+72443436 | None:intergenic |
| AAGCTACTGATTCATATATG+GGG | 0.664963 | 8:+72442808 | None:intergenic |
| TATTGTTGCCCATAATCACA+AGG | 0.682586 | 8:+72443845 | None:intergenic |
| AATTTGGAGTGCTGCCAGAG+AGG | 0.686632 | 8:-72441979 | MsG0880046366.01.T01:CDS |
| CGTTTGCCGCAAGACTACAA+TGG | 0.701397 | 8:-72444028 | MsG0880046366.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAGTTTACAAAATCT+CGG | + | Chr8:72444653-72444672 | None:intergenic | 15.0% |
| !! | AAACTAACTAATAGTTAATA+AGG | + | Chr8:72442195-72442214 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | Chr8:72442186-72442205 | None:intergenic | 15.0% |
| !! | ACATAATATTACTCAAAATT+TGG | + | Chr8:72443636-72443655 | None:intergenic | 15.0% |
| !! | CAAAATTTGGATTAATTTAA+AGG | + | Chr8:72443359-72443378 | None:intergenic | 15.0% |
| !!! | AAAAGATTAGAAATTTTGTT+TGG | - | Chr8:72445908-72445927 | MsG0880046366.01.T01:intron | 15.0% |
| !!! | AATAAATAAGGGTATAATAA+TGG | + | Chr8:72442567-72442586 | None:intergenic | 15.0% |
| !!! | ATTTTGAGAAAAAGAAAAAT+GGG | + | Chr8:72442501-72442520 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | - | Chr8:72442312-72442331 | MsG0880046366.01.T01:intron | 15.0% |
| !!! | CTACAATTTTTTATTTTTGA+GGG | - | Chr8:72442043-72442062 | MsG0880046366.01.T01:CDS | 15.0% |
| !!! | CTTTAAATTAATCCAAATTT+TGG | - | Chr8:72443357-72443376 | MsG0880046366.01.T01:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | Chr8:72442209-72442228 | MsG0880046366.01.T01:CDS | 15.0% |
| !!! | TATTTTGAATGTTTAACAAT+AGG | - | Chr8:72444696-72444715 | MsG0880046366.01.T01:intron | 15.0% |
| !!! | TATTTTGAGAAAAAGAAAAA+TGG | + | Chr8:72442502-72442521 | None:intergenic | 15.0% |
| !!! | TCTACAATTTTTTATTTTTG+AGG | - | Chr8:72442042-72442061 | MsG0880046366.01.T01:CDS | 15.0% |
| !!! | TTATTTTCCTGAATTATTTT+AGG | - | Chr8:72445535-72445554 | MsG0880046366.01.T01:intron | 15.0% |
| !! | AAAAATAATAAATGCTGCAT+TGG | + | Chr8:72442542-72442561 | None:intergenic | 20.0% |
| !! | AACAACAAATAATAACTAAC+CGG | + | Chr8:72443758-72443777 | None:intergenic | 20.0% |
| !! | AATTTAAAGGAGCTAAAAAT+TGG | + | Chr8:72443346-72443365 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | Chr8:72442272-72442291 | MsG0880046366.01.T01:intron | 20.0% |
| !! | ATAACAATGCAATCATATAT+GGG | - | Chr8:72444818-72444837 | MsG0880046366.01.T01:intron | 20.0% |
| !! | CAGAGCTTATTAAAATTATT+TGG | - | Chr8:72445255-72445274 | MsG0880046366.01.T01:intron | 20.0% |
| !! | GAGTTATATATCATTCTAAA+AGG | + | Chr8:72444974-72444993 | None:intergenic | 20.0% |
| !! | GGATGAAATTCAATAAATAA+GGG | + | Chr8:72442578-72442597 | None:intergenic | 20.0% |
| !! | TGGATGAAATTCAATAAATA+AGG | + | Chr8:72442579-72442598 | None:intergenic | 20.0% |
| !! | TTTAAGTAGATATTCATAGA+AGG | + | Chr8:72445569-72445588 | None:intergenic | 20.0% |
| !!! | AATTAATCCAAATTTTGGAT+CGG | - | Chr8:72443362-72443381 | MsG0880046366.01.T01:intron | 20.0% |
| !!! | AATTTTTTATTTTTGAGGGA+AGG | - | Chr8:72442047-72442066 | MsG0880046366.01.T01:intron | 20.0% |
| !!! | ATAAGCAAAATTTGACTTTT+TGG | - | Chr8:72442793-72442812 | MsG0880046366.01.T01:CDS | 20.0% |
| !!! | CATAATATTTTGTATTGGTA+TGG | + | Chr8:72444996-72445015 | None:intergenic | 20.0% |
| !!! | GAATCATTGTATTTGTATTT+TGG | + | Chr8:72443149-72443168 | None:intergenic | 20.0% |
| !!! | GTAAACTTTTTTTATAGATG+TGG | - | Chr8:72444660-72444679 | MsG0880046366.01.T01:intron | 20.0% |
| !!! | TATATATCATTCTAAAAGGA+TGG | + | Chr8:72444970-72444989 | None:intergenic | 20.0% |
| !!! | TTTGTTTTAACTATTGACTA+TGG | - | Chr8:72441979-72441998 | MsG0880046366.01.T01:CDS | 20.0% |
| !!! | TTTTTTTTACTGTTGTTTGT+AGG | - | Chr8:72443693-72443712 | MsG0880046366.01.T01:intron | 20.0% |
| ! | AAAAGACTATTATTGTGAGA+CGG | + | Chr8:72442476-72442495 | None:intergenic | 25.0% |
| ! | AAAATATTATGTGCACAGTA+TGG | - | Chr8:72445005-72445024 | MsG0880046366.01.T01:intron | 25.0% |
| ! | ATCTACACCTAAAATAATTC+AGG | + | Chr8:72445545-72445564 | None:intergenic | 25.0% |
| ! | ATGAGTCATATAATTGTCAT+AGG | + | Chr8:72443729-72443748 | None:intergenic | 25.0% |
| ! | ATTTCTCTAACCTTTGTATT+AGG | - | Chr8:72443543-72443562 | MsG0880046366.01.T01:CDS | 25.0% |
| ! | CAGTTCATTTGTAAATTCAA+TGG | + | Chr8:72445418-72445437 | None:intergenic | 25.0% |
| ! | CCTAAAATATAAGCAAATGT+TGG | - | Chr8:72443586-72443605 | MsG0880046366.01.T01:intron | 25.0% |
| ! | GAACTTGATGTTTATTATGT+TGG | - | Chr8:72445510-72445529 | MsG0880046366.01.T01:intron | 25.0% |
| ! | GATAACAATGCAATCATATA+TGG | - | Chr8:72444817-72444836 | MsG0880046366.01.T01:intron | 25.0% |
| ! | GCTATCAATTATGAAAAATG+AGG | - | Chr8:72443389-72443408 | MsG0880046366.01.T01:intron | 25.0% |
| ! | GTATAAATTCTTTCTGCATA+TGG | - | Chr8:72444785-72444804 | MsG0880046366.01.T01:intron | 25.0% |
| ! | GTTTGAAAATGTTGTTGAAA+GGG | + | Chr8:72443096-72443115 | None:intergenic | 25.0% |
| ! | TAAAAATTGGTGTAGGAAAT+AGG | + | Chr8:72443333-72443352 | None:intergenic | 25.0% |
| ! | TATAGTAAAACTGTTATGTC+TGG | - | Chr8:72445106-72445125 | MsG0880046366.01.T01:intron | 25.0% |
| ! | TTACCTCAAAAAGATTAATG+CGG | + | Chr8:72444250-72444269 | None:intergenic | 25.0% |
| ! | TTTGAAAATGTTGTTGAAAG+GGG | + | Chr8:72443095-72443114 | None:intergenic | 25.0% |
| !! | AATGTATCTAGTCTTTATTG+TGG | - | Chr8:72442831-72442850 | MsG0880046366.01.T01:CDS | 25.0% |
| !! | ATTTTGCTTATAATAGTGAC+CGG | - | Chr8:72442893-72442912 | MsG0880046366.01.T01:intron | 25.0% |
| !! | ATTTTGCTTATAATAGTGAC+CGG | + | Chr8:72442912-72442893 | None:intergenic | 25.0% |
| !! | CCAACATTTGCTTATATTTT+AGG | + | Chr8:72443589-72443608 | None:intergenic | 25.0% |
| !! | GTGCACATAATATTTTGTAT+TGG | + | Chr8:72445001-72445020 | None:intergenic | 25.0% |
| !! | TTTGAGGTAAATACTTGATT+TGG | - | Chr8:72444260-72444279 | MsG0880046366.01.T01:intron | 25.0% |
| !!! | AAAGCTACTGATTCATATAT+GGG | + | Chr8:72445207-72445226 | None:intergenic | 25.0% |
| !!! | ACTCTAGTCTTAAAATACTA+AGG | + | Chr8:72445087-72445106 | None:intergenic | 25.0% |
| !!! | AGTTCTGTTTTTATTCAGTT+CGG | - | Chr8:72444078-72444097 | MsG0880046366.01.T01:intron | 25.0% |
| !!! | ATTAATTGCGTTGATTTTGA+TGG | + | Chr8:72442717-72442736 | None:intergenic | 25.0% |
| !!! | TGTGTTGATTTTTCAATGTA+TGG | + | Chr8:72443486-72443505 | None:intergenic | 25.0% |
| !!! | TTTTTTCTTGAAAGACCAAT+GGG | + | Chr8:72443247-72443266 | None:intergenic | 25.0% |
| ACAATAAGTATGCAGTTGAT+AGG | + | Chr8:72445395-72445414 | None:intergenic | 30.0% | |
| AGGATCAACGAATTGAAATA+TGG | + | Chr8:72443313-72443332 | None:intergenic | 30.0% | |
| ATAAATTTCCAACTTTGTGC+AGG | - | Chr8:72445135-72445154 | MsG0880046366.01.T01:intron | 30.0% | |
| ATATAGATCCGATTTAAAGG+AGG | - | Chr8:72442018-72442037 | MsG0880046366.01.T01:CDS | 30.0% | |
| ATGGAGATTCACAAAATTCA+CGG | + | Chr8:72443467-72443486 | None:intergenic | 30.0% | |
| ATTGAACATTCTTCAGGAAT+TGG | - | Chr8:72445309-72445328 | MsG0880046366.01.T01:intron | 30.0% | |
| CCAATATAGATCCGATTTAA+AGG | - | Chr8:72442015-72442034 | MsG0880046366.01.T01:CDS | 30.0% | |
| CCTTTAAATCGGATCTATAT+TGG | + | Chr8:72442018-72442037 | None:intergenic | 30.0% | |
| GGTTTGAAAATGTTGTTGAA+AGG | + | Chr8:72443097-72443116 | None:intergenic | 30.0% | |
| GTTCAAGCTGCAATAATAAA+CGG | + | Chr8:72443964-72443983 | None:intergenic | 30.0% | |
| TAAATCAGAAAATACCTCTC+TGG | + | Chr8:72446049-72446068 | None:intergenic | 30.0% | |
| TACCTCAAAAAGATTAATGC+GGG | + | Chr8:72444249-72444268 | None:intergenic | 30.0% | |
| TATCTATCATTCAGTTCATG+TGG | - | Chr8:72445361-72445380 | MsG0880046366.01.T01:intron | 30.0% | |
| TCATATAATTGTCATAGGCA+TGG | + | Chr8:72443724-72443743 | None:intergenic | 30.0% | |
| TCCACTAACTACGATTAATA+GGG | - | Chr8:72442609-72442628 | MsG0880046366.01.T01:intron | 30.0% | |
| TTATATGACTCATGCATTTC+CGG | - | Chr8:72443736-72443755 | MsG0880046366.01.T01:intron | 30.0% | |
| TTGTAGATCCTCCTTTAAAT+CGG | + | Chr8:72442029-72442048 | None:intergenic | 30.0% | |
| ! | AGTCGTTTAAAGTTTATGCA+CGG | + | Chr8:72442754-72442773 | None:intergenic | 30.0% |
| ! | ATATGCATGGATTAACTTGA+AGG | - | Chr8:72444604-72444623 | MsG0880046366.01.T01:intron | 30.0% |
| ! | CTTAAAGCTCATATCCTTTT+CGG | - | Chr8:72445583-72445602 | MsG0880046366.01.T01:intron | 30.0% |
| ! | GTTTTACTAGTATGCTTATC+TGG | - | Chr8:72445709-72445728 | MsG0880046366.01.T01:intron | 30.0% |
| ! | TAGTAGTTAGCCTAATACAA+AGG | + | Chr8:72443556-72443575 | None:intergenic | 30.0% |
| ! | TTACAAGTCTTCAAGCATTT+TGG | - | Chr8:72445851-72445870 | MsG0880046366.01.T01:intron | 30.0% |
| ! | TTCAAGTTAATCCATGCATA+TGG | + | Chr8:72444605-72444624 | None:intergenic | 30.0% |
| !! | AAGCTACTGATTCATATATG+GGG | + | Chr8:72445206-72445225 | None:intergenic | 30.0% |
| !! | AGGTTCATTGATTCTTGAAA+TGG | - | Chr8:72445155-72445174 | MsG0880046366.01.T01:intron | 30.0% |
| !! | CAAAGCTACTGATTCATATA+TGG | + | Chr8:72445208-72445227 | None:intergenic | 30.0% |
| !! | CATTTGCTTATATTTTAGGC+AGG | + | Chr8:72443585-72443604 | None:intergenic | 30.0% |
| !! | GGTTCATTGATTCTTGAAAT+GGG | - | Chr8:72445156-72445175 | MsG0880046366.01.T01:intron | 30.0% |
| !! | TATTTGAACCATGTTGTTTC+AGG | - | Chr8:72444889-72444908 | MsG0880046366.01.T01:intron | 30.0% |
| !! | TGTATTTTGGATGTAGAAAG+AGG | + | Chr8:72443136-72443155 | None:intergenic | 30.0% |
| !! | TGTTTTACTTTTCGCTTGAT+TGG | - | Chr8:72444403-72444422 | MsG0880046366.01.T01:intron | 30.0% |
| !!! | GTTTTTTCTTGAAAGACCAA+TGG | + | Chr8:72443248-72443267 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | Chr8:72442104-72442123 | MsG0880046366.01.T01:intron | 30.0% |
| AAAGTACGAGAAGGAAGATA+AGG | + | Chr8:72443197-72443216 | None:intergenic | 35.0% | |
| AACAATACCGAATTCGAGAA+GGG | - | Chr8:72444182-72444201 | MsG0880046366.01.T01:CDS | 35.0% | |
| AAGGAGCTAAAAATTGGTGT+AGG | + | Chr8:72443340-72443359 | None:intergenic | 35.0% | |
| AATGAGAACTCCTAACAGTT+GGG | + | Chr8:72444731-72444750 | None:intergenic | 35.0% | |
| ACATCAGACTGCTTGAAATT+TGG | - | Chr8:72444309-72444328 | MsG0880046366.01.T01:intron | 35.0% | |
| ACCCTATTAATCGTAGTTAG+TGG | + | Chr8:72442613-72442632 | None:intergenic | 35.0% | |
| ACGTAAACCAGGTTCTTATT+GGG | - | Chr8:72445957-72445976 | MsG0880046366.01.T01:intron | 35.0% | |
| AGCTTAACCGATCCAAAATT+TGG | + | Chr8:72443372-72443391 | None:intergenic | 35.0% | |
| AGTTAGTGGAGTAGTTAAGT+TGG | + | Chr8:72442599-72442618 | None:intergenic | 35.0% | |
| ATATATCCCCAATAAGAACC+TGG | + | Chr8:72445967-72445986 | None:intergenic | 35.0% | |
| CAGGTTAATTGATGTAACAC+AGG | - | Chr8:72445782-72445801 | MsG0880046366.01.T01:intron | 35.0% | |
| CCACTAACTACGATTAATAG+GGG | - | Chr8:72442610-72442629 | MsG0880046366.01.T01:intron | 35.0% | |
| CCTAAAATCCTGAAACAACA+TGG | + | Chr8:72444900-72444919 | None:intergenic | 35.0% | |
| CTCCACTAACTACGATTAAT+AGG | - | Chr8:72442608-72442627 | MsG0880046366.01.T01:intron | 35.0% | |
| CTGTGTTACATCAATTAACC+TGG | + | Chr8:72445784-72445803 | None:intergenic | 35.0% | |
| GAACTGGAAACTGATACATA+TGG | - | Chr8:72444128-72444147 | MsG0880046366.01.T01:intron | 35.0% | |
| GAGTATTATTTAGAGACGGA+GGG | - | Chr8:72442919-72442938 | MsG0880046366.01.T01:intron | 35.0% | |
| GCATTATTGTCAACAGCAAA+AGG | + | Chr8:72445443-72445462 | None:intergenic | 35.0% | |
| TAATGAGAACTCCTAACAGT+TGG | + | Chr8:72444732-72444751 | None:intergenic | 35.0% | |
| TACGTAAACCAGGTTCTTAT+TGG | - | Chr8:72445956-72445975 | MsG0880046366.01.T01:intron | 35.0% | |
| TATTGTTGCCCATAATCACA+AGG | + | Chr8:72444169-72444188 | None:intergenic | 35.0% | |
| TCTCTAAATAATACTCCCTC+CGG | + | Chr8:72442915-72442934 | None:intergenic | 35.0% | |
| TCTGATCAACAGTTATAACC+AGG | - | Chr8:72445763-72445782 | MsG0880046366.01.T01:intron | 35.0% | |
| TCTTACAAGAATGAGCTACT+AGG | - | Chr8:72444521-72444540 | MsG0880046366.01.T01:intron | 35.0% | |
| TCTTCAAAGAAGTTGCTACA+AGG | - | Chr8:72444497-72444516 | MsG0880046366.01.T01:intron | 35.0% | |
| TTCTACGTGTGGAAGAAATT+TGG | - | Chr8:72446016-72446035 | MsG0880046366.01.T01:intron | 35.0% | |
| TTGAACACATCTTGTTGAAC+TGG | - | Chr8:72444112-72444131 | MsG0880046366.01.T01:intron | 35.0% | |
| ! | ACACACAGAGATTTTGTTGA+AGG | - | Chr8:72443501-72443520 | MsG0880046366.01.T01:CDS | 35.0% |
| ! | CTTTTCGCTTGATTGGAATT+TGG | - | Chr8:72444410-72444429 | MsG0880046366.01.T01:intron | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | Chr8:72442234-72442253 | MsG0880046366.01.T01:intron | 35.0% |
| ! | TAACTATTGACTATGGAGAG+AGG | - | Chr8:72441986-72442005 | MsG0880046366.01.T01:CDS | 35.0% |
| ! | TCAGTGAAAGTTTTTGTGAG+AGG | + | Chr8:72443847-72443866 | None:intergenic | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | Chr8:72442238-72442257 | MsG0880046366.01.T01:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | Chr8:72442338-72442357 | MsG0880046366.01.T01:intron | 35.0% |
| !! | CAATGGATTGAACATTCTTC+AGG | - | Chr8:72445303-72445322 | MsG0880046366.01.T01:intron | 35.0% |
| !! | GAGGGAGTATTATTTAGAGA+CGG | - | Chr8:72442915-72442934 | MsG0880046366.01.T01:intron | 35.0% |
| !! | TATTGCGAACTTTTTCTCTG+AGG | + | Chr8:72443272-72443291 | None:intergenic | 35.0% |
| !!! | CCATGTTGTTTCAGGATTTT+AGG | - | Chr8:72444897-72444916 | MsG0880046366.01.T01:intron | 35.0% |
| !!! | GACACTCATTTTGAAACAGA+TGG | + | Chr8:72442099-72442118 | None:intergenic | 35.0% |
| AAACATCAAGTTCAGCTCGT+CGG | + | Chr8:72445503-72445522 | None:intergenic | 40.0% | |
| AAGTGAGCTGGGAAATTTGA+AGG | - | Chr8:72443873-72443892 | MsG0880046366.01.T01:intron | 40.0% | |
| AATAGTCCTCCTTTCCGAAA+AGG | + | Chr8:72445600-72445619 | None:intergenic | 40.0% | |
| ACTACAGAAACAAGCACTTC+AGG | - | Chr8:72445044-72445063 | MsG0880046366.01.T01:intron | 40.0% | |
| ACTTGTCTCTGCTCATTTAC+TGG | - | Chr8:72444466-72444485 | MsG0880046366.01.T01:intron | 40.0% | |
| AGACTATTATTGTGAGACGG+AGG | + | Chr8:72442473-72442492 | None:intergenic | 40.0% | |
| ATGAGAACTCCTAACAGTTG+GGG | + | Chr8:72444730-72444749 | None:intergenic | 40.0% | |
| ATGTGCACAGTATGGAGTAA+TGG | - | Chr8:72445013-72445032 | MsG0880046366.01.T01:intron | 40.0% | |
| CAAATTTCCCAGCTCACTTA+GGG | + | Chr8:72443872-72443891 | None:intergenic | 40.0% | |
| CAACAATACCGAATTCGAGA+AGG | - | Chr8:72444181-72444200 | MsG0880046366.01.T01:CDS | 40.0% | |
| CAGTGCAACATTAGAGTTCT+TGG | - | Chr8:72444440-72444459 | MsG0880046366.01.T01:intron | 40.0% | |
| CATGCATATGGTAATCCAGT+AGG | + | Chr8:72444593-72444612 | None:intergenic | 40.0% | |
| CATGTCAAATAGTAGCGACA+AGG | + | Chr8:72443171-72443190 | None:intergenic | 40.0% | |
| CCCCTATTAATCGTAGTTAG+TGG | + | Chr8:72442670-72442689 | None:intergenic | 40.0% | |
| CGTAAACCAGGTTCTTATTG+GGG | - | Chr8:72445958-72445977 | MsG0880046366.01.T01:intron | 40.0% | |
| CGTGTTTCTTGCAGTTAAAG+TGG | + | Chr8:72445684-72445703 | None:intergenic | 40.0% | |
| CTACAGAAACAAGCACTTCA+GGG | - | Chr8:72445045-72445064 | MsG0880046366.01.T01:intron | 40.0% | |
| CTACTGGATTACCATATGCA+TGG | - | Chr8:72444591-72444610 | MsG0880046366.01.T01:intron | 40.0% | |
| CTTTAAACGACTATTCCCTC+CGG | - | Chr8:72442762-72442781 | MsG0880046366.01.T01:CDS | 40.0% | |
| GACTATTATTGTGAGACGGA+GGG | + | Chr8:72442472-72442491 | None:intergenic | 40.0% | |
| GGTGCTTTATCAAAACTGAC+TGG | - | Chr8:72445177-72445196 | MsG0880046366.01.T01:intron | 40.0% | |
| GTAATGATACCCCAACTGTT+AGG | - | Chr8:72444718-72444737 | MsG0880046366.01.T01:intron | 40.0% | |
| GTCTATGACTTACGTAAACC+AGG | - | Chr8:72445946-72445965 | MsG0880046366.01.T01:intron | 40.0% | |
| TAGGTCTGGCTGAAGATTTA+GGG | - | Chr8:72444540-72444559 | MsG0880046366.01.T01:intron | 40.0% | |
| TCAAAGAGAGCTGATGTGTT+TGG | - | Chr8:72443609-72443628 | MsG0880046366.01.T01:intron | 40.0% | |
| TCAAATTTCCCAGCTCACTT+AGG | + | Chr8:72443873-72443892 | None:intergenic | 40.0% | |
| TCAATGAACCTGCACAAAGT+TGG | + | Chr8:72445146-72445165 | None:intergenic | 40.0% | |
| TCTGCATACTCCATAGCTTA+CGG | + | Chr8:72445239-72445258 | None:intergenic | 40.0% | |
| TGCAACATTAGAGTTCTTGG+AGG | - | Chr8:72444443-72444462 | MsG0880046366.01.T01:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | Chr8:72442897-72442916 | MsG0880046366.01.T01:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | Chr8:72442916-72442897 | None:intergenic | 40.0% | |
| TTGCAGTTAAAGTGGTACCA+GGG | + | Chr8:72445676-72445695 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | Chr8:72442896-72442915 | MsG0880046366.01.T01:intron | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | Chr8:72442915-72442896 | None:intergenic | 40.0% | |
| ! | AGCTCATATCCTTTTCGGAA+AGG | - | Chr8:72445588-72445607 | MsG0880046366.01.T01:intron | 40.0% |
| ! | GGAGTATTATTTAGAGACGG+AGG | - | Chr8:72442918-72442937 | MsG0880046366.01.T01:intron | 40.0% |
| ! | GTAGAAAGAGGTTTGATTCG+CGG | + | Chr8:72443124-72443143 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | Chr8:72442237-72442256 | MsG0880046366.01.T01:intron | 40.0% |
| ! | TCATATCCTTTTCGGAAAGG+AGG | - | Chr8:72445591-72445610 | MsG0880046366.01.T01:intron | 40.0% |
| ! | TGCCCGCATTAATCTTTTTG+AGG | - | Chr8:72444244-72444263 | MsG0880046366.01.T01:intron | 40.0% |
| ! | TTTTCGGAAAGGAGGACTAT+TGG | - | Chr8:72445599-72445618 | MsG0880046366.01.T01:intron | 40.0% |
| !! | AGTGGAGTAGTTAAGTTGGA+TGG | + | Chr8:72442595-72442614 | None:intergenic | 40.0% |
| !! | GTCTCTAGCCTTGTGATTAT+GGG | - | Chr8:72444158-72444177 | MsG0880046366.01.T01:CDS | 40.0% |
| !! | TGTCTCTAGCCTTGTGATTA+TGG | - | Chr8:72444157-72444176 | MsG0880046366.01.T01:CDS | 40.0% |
| !!! | ACGGAGGGAGTACTTTTTAA+CGG | + | Chr8:72442457-72442476 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | Chr8:72442342-72442361 | MsG0880046366.01.T01:intron | 40.0% |
| AAGTCCAGCTACTAACCTGT+AGG | + | Chr8:72445882-72445901 | None:intergenic | 45.0% | |
| ATGGGATTGAGAGTGAGAGA+AGG | + | Chr8:72443229-72443248 | None:intergenic | 45.0% | |
| CAAGAATGAGCTACTAGGTC+TGG | - | Chr8:72444526-72444545 | MsG0880046366.01.T01:intron | 45.0% | |
| CATTCTTCAGGAATTGGAGC+TGG | - | Chr8:72445315-72445334 | MsG0880046366.01.T01:intron | 45.0% | |
| CCTATACGACCTGTTCTGTT+CGG | - | Chr8:72443051-72443070 | MsG0880046366.01.T01:intron | 45.0% | |
| CGCTAATTGAATCGCTGTCT+AGG | - | Chr8:72444017-72444036 | MsG0880046366.01.T01:CDS | 45.0% | |
| CTAGGTCTGGCTGAAGATTT+AGG | - | Chr8:72444539-72444558 | MsG0880046366.01.T01:intron | 45.0% | |
| CTTGCAGTTAAAGTGGTACC+AGG | + | Chr8:72445677-72445696 | None:intergenic | 45.0% | |
| GGACAGGAAGAGCAACTTAT+TGG | - | Chr8:72445824-72445843 | MsG0880046366.01.T01:intron | 45.0% | |
| TCCACACGTAGAAGAACTCA+CGG | + | Chr8:72446009-72446028 | None:intergenic | 45.0% | |
| TCTCTCACTCTCAATCCCAT+TGG | - | Chr8:72443229-72443248 | MsG0880046366.01.T01:intron | 45.0% | |
| TGTTGAAAGGGGAAAGAACG+AGG | + | Chr8:72443084-72443103 | None:intergenic | 45.0% | |
| TTGAGAGTGAGAGAAGGAGA+AGG | + | Chr8:72443223-72443242 | None:intergenic | 45.0% | |
| ! | ACTGATTCCCTAAGTGAGCT+GGG | - | Chr8:72443862-72443881 | MsG0880046366.01.T01:intron | 45.0% |
| ! | AGAAGGTGGAAAGTACGAGA+AGG | + | Chr8:72443206-72443225 | None:intergenic | 45.0% |
| !! | AGTCTTCAAGCATTTTGGCC+TGG | - | Chr8:72445856-72445875 | MsG0880046366.01.T01:intron | 45.0% |
| !! | GTGCAGAAGCATTTCAGACA+CGG | - | Chr8:72445649-72445668 | MsG0880046366.01.T01:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | Chr8:72442341-72442360 | MsG0880046366.01.T01:intron | 45.0% |
| ACCACACTTGACGTGTCAAC+TGG | - | Chr8:72445279-72445298 | MsG0880046366.01.T01:intron | 50.0% | |
| ACCGTGAGTTCTTCTACGTG+TGG | - | Chr8:72446005-72446024 | MsG0880046366.01.T01:intron | 50.0% | |
| AGAGTGAGAGAAGGAGAAGG+TGG | + | Chr8:72443220-72443239 | None:intergenic | 50.0% | |
| CACGAAGCTGATATGAGGAC+AGG | - | Chr8:72445808-72445827 | MsG0880046366.01.T01:intron | 50.0% | |
| CCACACTTGACGTGTCAACT+GGG | - | Chr8:72445280-72445299 | MsG0880046366.01.T01:intron | 50.0% | |
| CCGAACAGAACAGGTCGTAT+AGG | + | Chr8:72443054-72443073 | None:intergenic | 50.0% | |
| CGTTTGCCGCAAGACTACAA+TGG | - | Chr8:72443983-72444002 | MsG0880046366.01.T01:intron | 50.0% | |
| CTGTCCTCATATCAGCTTCG+TGG | + | Chr8:72445810-72445829 | None:intergenic | 50.0% | |
| GAAACAAGCACTTCAGGGTG+TGG | - | Chr8:72445050-72445069 | MsG0880046366.01.T01:intron | 50.0% | |
| GGAACAGAACCGAACAGAAC+AGG | + | Chr8:72443063-72443082 | None:intergenic | 50.0% | |
| GGTACCACGAAGCTGATATG+AGG | - | Chr8:72445803-72445822 | MsG0880046366.01.T01:intron | 50.0% | |
| TTGACGTGTCAACTGGGCAA+TGG | - | Chr8:72445286-72445305 | MsG0880046366.01.T01:intron | 50.0% | |
| ! | AGAGGTTTGATTCGCGGACT+TGG | + | Chr8:72443118-72443137 | None:intergenic | 50.0% |
| ! | GCAGAGCCATTGTAGTCTTG+CGG | + | Chr8:72443992-72444011 | None:intergenic | 50.0% |
| !! | AATTTGGAGTGCTGCCAGAG+AGG | - | Chr8:72446032-72446051 | MsG0880046366.01.T01:CDS | 50.0% |
| !! | CACTGATTCCCTAAGTGAGC+TGG | - | Chr8:72443861-72443880 | MsG0880046366.01.T01:intron | 50.0% |
| AGCATTTCAGACACGGTCCC+TGG | - | Chr8:72445656-72445675 | MsG0880046366.01.T01:intron | 55.0% | |
| CAGCTACTAACCTGTAGGCC+AGG | + | Chr8:72445877-72445896 | None:intergenic | 55.0% | |
| CCAGCGTTCAATACGCCTAC+TGG | - | Chr8:72444575-72444594 | MsG0880046366.01.T01:intron | 55.0% | |
| CCAGTAGGCGTATTGAACGC+TGG | + | Chr8:72444578-72444597 | None:intergenic | 55.0% | |
| CCCAGTTGACACGTCAAGTG+TGG | + | Chr8:72445283-72445302 | None:intergenic | 55.0% | |
| CTGGCCTACAGGTTAGTAGC+TGG | - | Chr8:72445875-72445894 | MsG0880046366.01.T01:intron | 55.0% | |
| GCGCACTCCCTTCTCGAATT+CGG | + | Chr8:72444192-72444211 | None:intergenic | 55.0% | |
| TGCGAGCTCTCCGTAAGCTA+TGG | - | Chr8:72445226-72445245 | MsG0880046366.01.T01:intron | 55.0% | |
| ! | AATTCGAGAAGGGAGTGCGC+TGG | - | Chr8:72444192-72444211 | MsG0880046366.01.T01:intron | 55.0% |
| !! | AGCATTTTGGCCTGGCCTAC+AGG | - | Chr8:72445864-72445883 | MsG0880046366.01.T01:intron | 55.0% |
| GCACTTCAGGGTGTGGTGAG+AGG | - | Chr8:72445057-72445076 | MsG0880046366.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 72441964 | 72446069 | 72441964 | ID=MsG0880046366.01;Name=MsG0880046366.01 |
| Chr8 | mRNA | 72441964 | 72446069 | 72441964 | ID=MsG0880046366.01.T01;Parent=MsG0880046366.01;Name=MsG0880046366.01.T01;_AED=0.51;_eAED=0.51;_QI=0|0.9|0.81|0.90|0.9|0.90|11|0|343 |
| Chr8 | exon | 72446026 | 72446069 | 72446026 | ID=MsG0880046366.01.T01:exon:7927;Parent=MsG0880046366.01.T01 |
| Chr8 | exon | 72444276 | 72444318 | 72444276 | ID=MsG0880046366.01.T01:exon:7926;Parent=MsG0880046366.01.T01 |
| Chr8 | exon | 72444139 | 72444204 | 72444139 | ID=MsG0880046366.01.T01:exon:7925;Parent=MsG0880046366.01.T01 |
| Chr8 | exon | 72443995 | 72444056 | 72443995 | ID=MsG0880046366.01.T01:exon:7924;Parent=MsG0880046366.01.T01 |
| Chr8 | exon | 72443768 | 72443867 | 72443768 | ID=MsG0880046366.01.T01:exon:7923;Parent=MsG0880046366.01.T01 |
| Chr8 | exon | 72443408 | 72443590 | 72443408 | ID=MsG0880046366.01.T01:exon:7922;Parent=MsG0880046366.01.T01 |
| Chr8 | exon | 72442962 | 72443010 | 72442962 | ID=MsG0880046366.01.T01:exon:7921;Parent=MsG0880046366.01.T01 |
| Chr8 | exon | 72442697 | 72442876 | 72442697 | ID=MsG0880046366.01.T01:exon:7920;Parent=MsG0880046366.01.T01 |
| Chr8 | exon | 72442356 | 72442476 | 72442356 | ID=MsG0880046366.01.T01:exon:7919;Parent=MsG0880046366.01.T01 |
| Chr8 | exon | 72442148 | 72442229 | 72442148 | ID=MsG0880046366.01.T01:exon:7918;Parent=MsG0880046366.01.T01 |
| Chr8 | exon | 72441964 | 72442065 | 72441964 | ID=MsG0880046366.01.T01:exon:7917;Parent=MsG0880046366.01.T01 |
| Chr8 | CDS | 72446026 | 72446069 | 72446026 | ID=MsG0880046366.01.T01:cds;Parent=MsG0880046366.01.T01 |
| Chr8 | CDS | 72444276 | 72444318 | 72444276 | ID=MsG0880046366.01.T01:cds;Parent=MsG0880046366.01.T01 |
| Chr8 | CDS | 72444139 | 72444204 | 72444139 | ID=MsG0880046366.01.T01:cds;Parent=MsG0880046366.01.T01 |
| Chr8 | CDS | 72443995 | 72444056 | 72443995 | ID=MsG0880046366.01.T01:cds;Parent=MsG0880046366.01.T01 |
| Chr8 | CDS | 72443768 | 72443867 | 72443768 | ID=MsG0880046366.01.T01:cds;Parent=MsG0880046366.01.T01 |
| Chr8 | CDS | 72443408 | 72443590 | 72443408 | ID=MsG0880046366.01.T01:cds;Parent=MsG0880046366.01.T01 |
| Chr8 | CDS | 72442962 | 72443010 | 72442962 | ID=MsG0880046366.01.T01:cds;Parent=MsG0880046366.01.T01 |
| Chr8 | CDS | 72442697 | 72442876 | 72442697 | ID=MsG0880046366.01.T01:cds;Parent=MsG0880046366.01.T01 |
| Chr8 | CDS | 72442356 | 72442476 | 72442356 | ID=MsG0880046366.01.T01:cds;Parent=MsG0880046366.01.T01 |
| Chr8 | CDS | 72442148 | 72442229 | 72442148 | ID=MsG0880046366.01.T01:cds;Parent=MsG0880046366.01.T01 |
| Chr8 | CDS | 72441964 | 72442065 | 72441964 | ID=MsG0880046366.01.T01:cds;Parent=MsG0880046366.01.T01 |
| Gene Sequence |
| Protein sequence |
