Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046516.01.T01 | KEH31994.1 | 91.185 | 329 | 19 | 1 | 19 | 347 | 1 | 319 | 0 | 568 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046516.01.T01 | A0A072UQ96 | 91.185 | 329 | 19 | 1 | 19 | 347 | 1 | 319 | 0.0 | 568 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048660.01 | MsG0880046516.01 | 0.814536 | 1.465789e-51 | 9.861470e-49 |
| MsG0080048849.01 | MsG0880046516.01 | 0.808012 | 3.817033e-50 | 2.158126e-47 |
| MsG0080048878.01 | MsG0880046516.01 | 0.807433 | 5.067141e-50 | 2.821934e-47 |
| MsG0180000355.01 | MsG0880046516.01 | 0.802573 | 5.262500e-49 | 2.586640e-46 |
| MsG0180001610.01 | MsG0880046516.01 | 0.803553 | 3.299712e-49 | 1.663175e-46 |
| MsG0180002024.01 | MsG0880046516.01 | 0.803429 | 3.500313e-49 | 1.758604e-46 |
| MsG0180002399.01 | MsG0880046516.01 | 0.822656 | 2.107745e-53 | 1.775263e-50 |
| MsG0880044005.01 | MsG0880046516.01 | 0.806611 | 7.561533e-50 | 4.122288e-47 |
| MsG0880044036.01 | MsG0880046516.01 | 0.813514 | 2.463543e-51 | 1.612137e-48 |
| MsG0880044131.01 | MsG0880046516.01 | 0.802601 | 5.191808e-49 | 2.553801e-46 |
| MsG0880045992.01 | MsG0880046516.01 | 0.820369 | 7.115179e-53 | 5.619164e-50 |
| MsG0880046516.01 | MsG0880047394.01 | 0.833717 | 4.542610e-56 | 5.274929e-53 |
| MsG0880046516.01 | MsG0880047696.01 | 0.819004 | 1.458306e-52 | 1.108907e-49 |
| MsG0880046516.01 | MsG0880047754.01 | 0.807067 | 6.058800e-50 | 3.342163e-47 |
| MsG0180003353.01 | MsG0880046516.01 | 0.816495 | 5.368823e-52 | 3.809992e-49 |
| MsG0180003821.01 | MsG0880046516.01 | 0.826841 | 2.174279e-54 | 2.062676e-51 |
| MsG0180004493.01 | MsG0880046516.01 | 0.841585 | 4.345299e-58 | 6.414313e-55 |
| MsG0180004500.01 | MsG0880046516.01 | 0.817669 | 2.924891e-52 | 2.143645e-49 |
| MsG0180004765.01 | MsG0880046516.01 | 0.800699 | 1.274831e-48 | 5.975223e-46 |
| MsG0180005240.01 | MsG0880046516.01 | 0.820924 | 5.302807e-53 | 4.253068e-50 |
| MsG0180005730.01 | MsG0880046516.01 | 0.805113 | 1.561352e-49 | 8.191687e-47 |
| MsG0180006054.01 | MsG0880046516.01 | 0.802323 | 5.924712e-49 | 2.893882e-46 |
| MsG0180006096.01 | MsG0880046516.01 | 0.840673 | 7.548626e-58 | 1.083087e-54 |
| MsG0180006104.01 | MsG0880046516.01 | 0.811827 | 5.760760e-51 | 3.602754e-48 |
| MsG0280006309.01 | MsG0880046516.01 | 0.823410 | 1.405824e-53 | 1.209399e-50 |
| MsG0780040888.01 | MsG0880046516.01 | 0.800660 | 1.298899e-48 | 6.082256e-46 |
| MsG0780041416.01 | MsG0880046516.01 | 0.806521 | 7.900770e-50 | 4.297424e-47 |
| MsG0780041440.01 | MsG0880046516.01 | 0.817444 | 3.286668e-52 | 2.394028e-49 |
| MsG0780041673.01 | MsG0880046516.01 | 0.805758 | 1.143581e-49 | 6.100482e-47 |
| MsG0780041729.01 | MsG0880046516.01 | -0.825395 | 4.798800e-54 | 4.368523e-51 |
| MsG0780041734.01 | MsG0880046516.01 | -0.800076 | 1.707632e-48 | 7.878452e-46 |
| MsG0780041747.01 | MsG0880046516.01 | 0.813201 | 2.884810e-51 | 1.871707e-48 |
| MsG0880041861.01 | MsG0880046516.01 | 0.808183 | 3.510012e-50 | 1.993604e-47 |
| MsG0280010916.01 | MsG0880046516.01 | 0.807712 | 4.421029e-50 | 2.480056e-47 |
| MsG0280011255.01 | MsG0880046516.01 | 0.826486 | 2.642646e-54 | 2.481567e-51 |
| MsG0380011669.01 | MsG0880046516.01 | 0.803267 | 3.782214e-49 | 1.892300e-46 |
| MsG0380012005.01 | MsG0880046516.01 | 0.810100 | 1.363390e-50 | 8.145916e-48 |
| MsG0680030880.01 | MsG0880046516.01 | 0.811150 | 8.084948e-51 | 4.966737e-48 |
| MsG0680031263.01 | MsG0880046516.01 | 0.806930 | 6.474216e-50 | 3.558797e-47 |
| MsG0680031264.01 | MsG0880046516.01 | 0.816923 | 4.305682e-52 | 3.091734e-49 |
| MsG0680031621.01 | MsG0880046516.01 | 0.800529 | 1.380966e-48 | 6.444899e-46 |
| MsG0680034235.01 | MsG0880046516.01 | 0.809801 | 1.581430e-50 | 9.375172e-48 |
| MsG0680035216.01 | MsG0880046516.01 | 0.805819 | 1.110370e-49 | 5.932440e-47 |
| MsG0680035580.01 | MsG0880046516.01 | 0.803579 | 3.259266e-49 | 1.643895e-46 |
| MsG0480018584.01 | MsG0880046516.01 | 0.822342 | 2.493841e-53 | 2.081691e-50 |
| MsG0480018653.01 | MsG0880046516.01 | 0.801890 | 7.272442e-49 | 3.513234e-46 |
| MsG0480018911.01 | MsG0880046516.01 | 0.820440 | 6.852352e-53 | 5.422301e-50 |
| MsG0480019148.01 | MsG0880046516.01 | 0.805624 | 1.220222e-49 | 6.486551e-47 |
| MsG0480019711.01 | MsG0880046516.01 | 0.810849 | 9.395658e-51 | 5.726251e-48 |
| MsG0480020024.01 | MsG0880046516.01 | 0.845798 | 3.243086e-59 | 5.468497e-56 |
| MsG0480020025.01 | MsG0880046516.01 | 0.810647 | 1.038819e-50 | 6.296984e-48 |
| MsG0480020788.01 | MsG0880046516.01 | 0.807419 | 5.101929e-50 | 2.840299e-47 |
| MsG0480021056.01 | MsG0880046516.01 | 0.832772 | 7.813424e-56 | 8.820610e-53 |
| MsG0480021918.01 | MsG0880046516.01 | 0.804270 | 2.341154e-49 | 1.201880e-46 |
| MsG0480022624.01 | MsG0880046516.01 | 0.810988 | 8.763243e-51 | 5.361272e-48 |
| MsG0480023073.01 | MsG0880046516.01 | 0.804078 | 2.567041e-49 | 1.311431e-46 |
| MsG0480023261.01 | MsG0880046516.01 | 0.800022 | 1.751028e-48 | 8.067639e-46 |
| MsG0480023488.01 | MsG0880046516.01 | 0.800277 | 1.554500e-48 | 7.208693e-46 |
| MsG0480023660.01 | MsG0880046516.01 | 0.806881 | 6.631267e-50 | 3.640496e-47 |
| MsG0580024790.01 | MsG0880046516.01 | -0.845717 | 3.411553e-59 | 5.737395e-56 |
| MsG0580025332.01 | MsG0880046516.01 | 0.803651 | 3.148974e-49 | 1.591076e-46 |
| MsG0580025661.01 | MsG0880046516.01 | 0.820328 | 7.268306e-53 | 5.733255e-50 |
| MsG0580025816.01 | MsG0880046516.01 | 0.807090 | 5.988825e-50 | 3.305613e-47 |
| MsG0380015784.01 | MsG0880046516.01 | 0.800234 | 1.586061e-48 | 7.346841e-46 |
| MsG0380016529.01 | MsG0880046516.01 | 0.807376 | 5.210564e-50 | 2.897501e-47 |
| MsG0380017202.01 | MsG0880046516.01 | 0.814864 | 1.240153e-51 | 8.417048e-49 |
| MsG0380017244.01 | MsG0880046516.01 | 0.812576 | 3.954666e-51 | 2.523622e-48 |
| MsG0380017461.01 | MsG0880046516.01 | 0.805259 | 1.455448e-49 | 7.664301e-47 |
| MsG0380017498.01 | MsG0880046516.01 | 0.809489 | 1.845293e-50 | 1.084873e-47 |
| MsG0380017589.01 | MsG0880046516.01 | 0.806158 | 9.424109e-50 | 5.078868e-47 |
| MsG0380017931.01 | MsG0880046516.01 | 0.813359 | 2.663296e-51 | 1.735607e-48 |
| MsG0580027655.01 | MsG0880046516.01 | 0.804021 | 2.638765e-49 | 1.346079e-46 |
| MsG0580027980.01 | MsG0880046516.01 | 0.807275 | 5.474397e-50 | 3.036306e-47 |
| MsG0580028630.01 | MsG0880046516.01 | 0.814078 | 1.850114e-51 | 1.229346e-48 |
| MsG0580029236.01 | MsG0880046516.01 | 0.805937 | 1.048911e-49 | 5.620977e-47 |
| MsG0580029376.01 | MsG0880046516.01 | 0.815782 | 7.749527e-52 | 5.393972e-49 |
| MsG0580029549.01 | MsG0880046516.01 | 0.803771 | 2.972933e-49 | 1.506810e-46 |
| MsG0580029879.01 | MsG0880046516.01 | 0.806157 | 9.427129e-50 | 5.080423e-47 |
| MsG0580029919.01 | MsG0880046516.01 | 0.810246 | 1.268044e-50 | 7.605022e-48 |
| MsG0580029925.01 | MsG0880046516.01 | 0.818264 | 2.145889e-52 | 1.598516e-49 |
| MsG0680030515.01 | MsG0880046516.01 | 0.819562 | 1.088304e-52 | 8.403887e-50 |
| MsG0280006601.01 | MsG0880046516.01 | 0.815683 | 8.155155e-52 | 5.660559e-49 |
| MsG0280007118.01 | MsG0880046516.01 | 0.805562 | 1.257182e-49 | 6.672190e-47 |
| MsG0280007531.01 | MsG0880046516.01 | 0.806696 | 7.256707e-50 | 3.964736e-47 |
| MsG0280007575.01 | MsG0880046516.01 | 0.800047 | 1.731045e-48 | 7.980512e-46 |
| MsG0280007903.01 | MsG0880046516.01 | 0.809388 | 1.939437e-50 | 1.137223e-47 |
| MsG0280008113.01 | MsG0880046516.01 | 0.801658 | 8.115512e-49 | 3.897169e-46 |
| MsG0280008738.01 | MsG0880046516.01 | 0.803916 | 2.774457e-49 | 1.411549e-46 |
| MsG0280008928.01 | MsG0880046516.01 | 0.822159 | 2.749904e-53 | 2.283330e-50 |
| MsG0280008929.01 | MsG0880046516.01 | 0.836140 | 1.113963e-56 | 1.391387e-53 |
| MsG0280009256.01 | MsG0880046516.01 | 0.807352 | 5.270918e-50 | 2.929301e-47 |
| MsG0280010184.01 | MsG0880046516.01 | 0.822376 | 2.448209e-53 | 2.045719e-50 |
| MsG0280010350.01 | MsG0880046516.01 | 0.816360 | 5.755340e-52 | 4.069578e-49 |
| MsG0280010366.01 | MsG0880046516.01 | 0.817898 | 2.597094e-52 | 1.915305e-49 |
| MsG0280010517.01 | MsG0880046516.01 | 0.819544 | 1.098743e-52 | 8.480191e-50 |
| MsG0780036602.01 | MsG0880046516.01 | 0.807998 | 3.843291e-50 | 2.172195e-47 |
| MsG0780036659.01 | MsG0880046516.01 | 0.808007 | 3.825560e-50 | 2.162718e-47 |
| MsG0780037093.01 | MsG0880046516.01 | 0.801329 | 9.477999e-49 | 4.513952e-46 |
| MsG0780037330.01 | MsG0880046516.01 | 0.822868 | 1.881837e-53 | 1.594501e-50 |
| MsG0780038378.01 | MsG0880046516.01 | 0.815667 | 8.221958e-52 | 5.704371e-49 |
| MsG0780038907.01 | MsG0880046516.01 | 0.814489 | 1.500948e-51 | 1.008563e-48 |
| MsG0780039369.01 | MsG0880046516.01 | 0.830005 | 3.747140e-55 | 3.898697e-52 |
| MsG0780039443.01 | MsG0880046516.01 | 0.805131 | 1.547851e-49 | 8.124812e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046516.01.T01 | MTR_4g109330 | 91.185 | 329 | 19 | 1 | 19 | 347 | 1 | 319 | 0.0 | 568 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046516.01.T01 | AT5G07890 | 43.417 | 357 | 167 | 5 | 3 | 347 | 58 | 391 | 4.96e-67 | 216 |
| MsG0880046516.01.T01 | AT5G07890 | 43.417 | 357 | 167 | 5 | 3 | 347 | 58 | 391 | 4.96e-67 | 216 |
| MsG0880046516.01.T01 | AT5G07890 | 43.417 | 357 | 167 | 5 | 3 | 347 | 58 | 391 | 4.96e-67 | 216 |
| MsG0880046516.01.T01 | AT5G07890 | 43.417 | 357 | 167 | 5 | 3 | 347 | 58 | 391 | 4.96e-67 | 216 |
| MsG0880046516.01.T01 | AT5G07890 | 43.072 | 332 | 154 | 5 | 28 | 347 | 2 | 310 | 3.20e-62 | 202 |
| MsG0880046516.01.T01 | AT5G61200 | 42.651 | 347 | 166 | 6 | 3 | 347 | 57 | 372 | 2.11e-50 | 173 |
| MsG0880046516.01.T01 | AT5G61200 | 42.651 | 347 | 166 | 6 | 3 | 347 | 57 | 372 | 2.11e-50 | 173 |
| MsG0880046516.01.T01 | AT5G61200 | 42.160 | 287 | 143 | 5 | 63 | 347 | 1 | 266 | 1.40e-37 | 136 |
| MsG0880046516.01.T01 | AT5G61200 | 42.509 | 287 | 142 | 5 | 63 | 347 | 1 | 266 | 2.83e-37 | 135 |
Find 53 sgRNAs with CRISPR-Local
Find 101 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATATATCCACAGAATTTA+TGG | 0.129220 | 8:-74270979 | MsG0880046516.01.T01:intron |
| GGGTCCACTCCTTGATATTT+TGG | 0.165930 | 8:-74270947 | MsG0880046516.01.T01:CDS |
| CAGAATTTATGGAGAAATAT+TGG | 0.215765 | 8:-74270968 | MsG0880046516.01.T01:CDS |
| TAGATTGATTGACGAGTTAC+AGG | 0.299693 | 8:-74271869 | MsG0880046516.01.T01:CDS |
| CTGAATTGTTCTCAAGAAAT+AGG | 0.309432 | 8:-74272374 | MsG0880046516.01.T01:CDS |
| GCAAAGAATTGCTGAGTTAG+AGG | 0.319992 | 8:-74270541 | MsG0880046516.01.T01:CDS |
| CAAGGTAAACTGCTCTGAAT+TGG | 0.341537 | 8:+74272095 | None:intergenic |
| AGAGCAGTTTACCTTGATTC+AGG | 0.354117 | 8:-74272088 | MsG0880046516.01.T01:CDS |
| GTCATTGTCAATAGTTCATA+TGG | 0.359250 | 8:-74272435 | MsG0880046516.01.T01:CDS |
| AGAAGCAGAGGACTTAGTTC+AGG | 0.362838 | 8:-74270646 | MsG0880046516.01.T01:CDS |
| AGAATTTATGGAGAAATATT+GGG | 0.363986 | 8:-74270967 | MsG0880046516.01.T01:CDS |
| GAGCTGAGATACCAACTTAC+AGG | 0.375268 | 8:-74270615 | MsG0880046516.01.T01:CDS |
| TTCCCGTTTAATTCTGATGC+TGG | 0.385857 | 8:+74270910 | None:intergenic |
| GATCCAGCATCAGAATTAAA+CGG | 0.389733 | 8:-74270913 | MsG0880046516.01.T01:CDS |
| TTTCTCAAAAGGTTGAAGAA+TGG | 0.422376 | 8:-74271747 | MsG0880046516.01.T01:CDS |
| GGTATTTGTCGTGATTTGAT+TGG | 0.429934 | 8:-74272353 | MsG0880046516.01.T01:CDS |
| TTCTTCATTCAGAGAGATGA+TGG | 0.431102 | 8:+74271822 | None:intergenic |
| ATTCTATACAGATTATCTTC+AGG | 0.433841 | 8:-74272247 | MsG0880046516.01.T01:intron |
| ATTAAGAGTGGAAAAGTTGA+GGG | 0.436389 | 8:-74270676 | MsG0880046516.01.T01:CDS |
| AGTTTCTAGTTCCTGAATCA+AGG | 0.438634 | 8:+74272077 | None:intergenic |
| TTGCTCCTTTCTTTGCTCAC+AGG | 0.439438 | 8:+74271685 | None:intergenic |
| TTTCTTCTAGAGTTTCATCC+TGG | 0.440419 | 8:+74271905 | None:intergenic |
| AGAGGACTTAGTTCAGGAAA+TGG | 0.447827 | 8:-74270640 | MsG0880046516.01.T01:CDS |
| ATCCAGCATCAGAATTAAAC+GGG | 0.453499 | 8:-74270912 | MsG0880046516.01.T01:CDS |
| TAAGAAATACATCCAGAAGT+TGG | 0.465838 | 8:-74272408 | MsG0880046516.01.T01:CDS |
| TGAGTTGAAATTCAAAGTGA+TGG | 0.480818 | 8:-74272166 | MsG0880046516.01.T01:CDS |
| GAGTATGAAGCTTGAAATGA+TGG | 0.482285 | 8:-74271962 | MsG0880046516.01.T01:CDS |
| CTTCTAGCAGACCTGTAAGT+TGG | 0.483386 | 8:+74270604 | None:intergenic |
| ATTTCATTGCCAAAATATCA+AGG | 0.487072 | 8:+74270938 | None:intergenic |
| AAGTTTGTCTATAGAGAGAC+TGG | 0.488364 | 8:-74272031 | MsG0880046516.01.T01:CDS |
| GAAGCTTGAAATGATGGCCT+TGG | 0.492791 | 8:-74271956 | MsG0880046516.01.T01:CDS |
| CAAGGATGGACTGCAAATCA+AGG | 0.497460 | 8:-74271716 | MsG0880046516.01.T01:CDS |
| CTCATATTCTTGCATCTGAC+AGG | 0.500518 | 8:+74270876 | None:intergenic |
| AATTGCTGAGTTAGAGGCTC+GGG | 0.507868 | 8:-74270535 | MsG0880046516.01.T01:CDS |
| TCAAAAGGTTGAAGAATGGA+TGG | 0.512648 | 8:-74271743 | MsG0880046516.01.T01:CDS |
| ATTCGAGGCCAAGAAAATCC+AGG | 0.524750 | 8:-74271923 | MsG0880046516.01.T01:CDS |
| AATTAAGAGTGGAAAAGTTG+AGG | 0.542151 | 8:-74270677 | MsG0880046516.01.T01:CDS |
| CTTGGAACAGAATTTATTCG+AGG | 0.543358 | 8:-74271938 | MsG0880046516.01.T01:CDS |
| GCAAGAATATGAGTTTCTTG+TGG | 0.549818 | 8:-74270866 | MsG0880046516.01.T01:CDS |
| TGAAGAATGGATGGAAAACA+AGG | 0.556478 | 8:-74271734 | MsG0880046516.01.T01:CDS |
| AGTTTCCTGTGAGCAAAGAA+AGG | 0.557108 | 8:-74271690 | MsG0880046516.01.T01:CDS |
| CTCGAATAAATTCTGTTCCA+AGG | 0.560790 | 8:+74271939 | None:intergenic |
| AAATAATATACTACTCATGT+TGG | 0.566714 | 8:+74271768 | None:intergenic |
| GAATGGATGGAAAACAAGGA+TGG | 0.576264 | 8:-74271730 | MsG0880046516.01.T01:CDS |
| TAACTCAGCAATTCTTTGCA+AGG | 0.577604 | 8:+74270545 | None:intergenic |
| GGAACTAGAAACTAAAGATG+TGG | 0.588237 | 8:-74272067 | MsG0880046516.01.T01:CDS |
| GAGGGCAAAAGAAGAAGCAG+AGG | 0.589750 | 8:-74270658 | MsG0880046516.01.T01:CDS |
| TTACTAGGAAGAATTAAGAG+TGG | 0.595051 | 8:-74270688 | MsG0880046516.01.T01:intron |
| GAATTGCTGAGTTAGAGGCT+CGG | 0.614148 | 8:-74270536 | MsG0880046516.01.T01:CDS |
| AAACTGAGACTCTAATGCCA+TGG | 0.614895 | 8:+74271993 | None:intergenic |
| ATTGCCAAAATATCAAGGAG+TGG | 0.619048 | 8:+74270943 | None:intergenic |
| GGAGCAAAGCAGATGACACA+AGG | 0.654689 | 8:-74271669 | MsG0880046516.01.T01:intron |
| ACACATGTTCAATGCAAGCA+CGG | 0.678351 | 8:+74270568 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGAATAAAATGGAAATA+GGG | - | Chr8:74271518-74271537 | MsG0880046516.01.T01:intron | 15.0% |
| !! | ATAGAATTCAAATCAAATTA+TGG | + | Chr8:74270740-74270759 | None:intergenic | 15.0% |
| !! | TCTATTTCAAATGAATAAAA+TGG | - | Chr8:74271510-74271529 | MsG0880046516.01.T01:intron | 15.0% |
| !!! | TAGTATATTATTTTCTCAAA+AGG | - | Chr8:74271242-74271261 | MsG0880046516.01.T01:intron | 15.0% |
| !! | AAATAATATACTACTCATGT+TGG | + | Chr8:74271235-74271254 | None:intergenic | 20.0% |
| !! | AGAATTTATGGAGAAATATT+GGG | - | Chr8:74272033-74272052 | MsG0880046516.01.T01:CDS | 20.0% |
| !! | CAAATGAATAAAATGGAAAT+AGG | - | Chr8:74271517-74271536 | MsG0880046516.01.T01:intron | 20.0% |
| !! | CAGATAAGTAAAAATCAAAA+CGG | + | Chr8:74271730-74271749 | None:intergenic | 20.0% |
| !! | TAATATATCCACAGAATTTA+TGG | - | Chr8:74272021-74272040 | MsG0880046516.01.T01:CDS | 20.0% |
| !!! | ATTTGTCCAGTTATTTTAAT+TGG | - | Chr8:74271401-74271420 | MsG0880046516.01.T01:intron | 20.0% |
| !!! | TAAAGTAATTCTTTTGCTAT+TGG | - | Chr8:74272263-74272282 | MsG0880046516.01.T01:intron | 20.0% |
| !!! | TTTGTCCAGTTATTTTAATT+GGG | - | Chr8:74271402-74271421 | MsG0880046516.01.T01:intron | 20.0% |
| ! | AATACAAAAGGAAAACAATG+AGG | + | Chr8:74271955-74271974 | None:intergenic | 25.0% |
| ! | ACTTAAATGCAAGAGTAAAT+AGG | + | Chr8:74271442-74271461 | None:intergenic | 25.0% |
| ! | ATATTTCTCCATAAATTCTG+TGG | + | Chr8:74272032-74272051 | None:intergenic | 25.0% |
| ! | ATTCTATACAGATTATCTTC+AGG | - | Chr8:74270753-74270772 | MsG0880046516.01.T01:intron | 25.0% |
| ! | ATTTACTCTTGCATTTAAGT+TGG | - | Chr8:74271442-74271461 | MsG0880046516.01.T01:intron | 25.0% |
| ! | ATTTCATTGCCAAAATATCA+AGG | + | Chr8:74272065-74272084 | None:intergenic | 25.0% |
| ! | CAATACCCAATTAAAATAAC+TGG | + | Chr8:74271410-74271429 | None:intergenic | 25.0% |
| ! | CAGAATTTATGGAGAAATAT+TGG | - | Chr8:74272032-74272051 | MsG0880046516.01.T01:CDS | 25.0% |
| ! | TCACTAAACATTAGTGATAA+TGG | - | Chr8:74271839-74271858 | MsG0880046516.01.T01:CDS | 25.0% |
| ! | TTACAAAATGATCACTAGAA+AGG | + | Chr8:74272004-74272023 | None:intergenic | 25.0% |
| ! | TTTAAATATGGCTATATGGA+TGG | - | Chr8:74271783-74271802 | MsG0880046516.01.T01:CDS | 25.0% |
| !! | AAAAGAAGTTTTCAGCTTAA+GGG | - | Chr8:74270867-74270886 | MsG0880046516.01.T01:CDS | 25.0% |
| !! | GAGCTTCTAAAAAAAAATGA+AGG | - | Chr8:74271654-74271673 | MsG0880046516.01.T01:intron | 25.0% |
| !! | TTCATTTGAAATAGAAGAAG+TGG | + | Chr8:74271505-74271524 | None:intergenic | 25.0% |
| !!! | ATCCAAACTAGCTTTAAATA+TGG | - | Chr8:74271771-74271790 | MsG0880046516.01.T01:CDS | 25.0% |
| !!! | ATTTTAATTGGGTATTGTTG+TGG | - | Chr8:74271413-74271432 | MsG0880046516.01.T01:intron | 25.0% |
| !!! | ATTTTTTGACTTCCTTTACT+AGG | - | Chr8:74272297-74272316 | MsG0880046516.01.T01:intron | 25.0% |
| !!! | TAGCTTTAAATATGGCTATA+TGG | - | Chr8:74271779-74271798 | MsG0880046516.01.T01:CDS | 25.0% |
| AATTAAGAGTGGAAAAGTTG+AGG | - | Chr8:74272323-74272342 | MsG0880046516.01.T01:intron | 30.0% | |
| ATTAAGAGTGGAAAAGTTGA+GGG | - | Chr8:74272324-74272343 | MsG0880046516.01.T01:intron | 30.0% | |
| CCTCAAATTGTGAATACAAA+AGG | + | Chr8:74271967-74271986 | None:intergenic | 30.0% | |
| CTCTTAATTCTTCCTAGTAA+AGG | + | Chr8:74272312-74272331 | None:intergenic | 30.0% | |
| CTGAATTGTTCTCAAGAAAT+AGG | - | Chr8:74270626-74270645 | MsG0880046516.01.T01:CDS | 30.0% | |
| GTAAAAACGTTTAACACTGT+AGG | - | Chr8:74270678-74270697 | MsG0880046516.01.T01:CDS | 30.0% | |
| GTCATTGTCAATAGTTCATA+TGG | - | Chr8:74270565-74270584 | MsG0880046516.01.T01:CDS | 30.0% | |
| TAAGAAATACATCCAGAAGT+TGG | - | Chr8:74270592-74270611 | MsG0880046516.01.T01:CDS | 30.0% | |
| TACTTATCTGTAAGTACTTG+TGG | - | Chr8:74271740-74271759 | MsG0880046516.01.T01:CDS | 30.0% | |
| TCACTAAACGTTAGTGATAA+TGG | - | Chr8:74271924-74271943 | MsG0880046516.01.T01:CDS | 30.0% | |
| TTACTAGGAAGAATTAAGAG+TGG | - | Chr8:74272312-74272331 | MsG0880046516.01.T01:intron | 30.0% | |
| TTTCTCAAAAGGTTGAAGAA+TGG | - | Chr8:74271253-74271272 | MsG0880046516.01.T01:intron | 30.0% | |
| ! | AGCCATATTTAAAGCTAGTT+TGG | + | Chr8:74271776-74271795 | None:intergenic | 30.0% |
| ! | CCTTTTGTATTCACAATTTG+AGG | - | Chr8:74271964-74271983 | MsG0880046516.01.T01:CDS | 30.0% |
| ! | GAAAAGAAGTTTTCAGCTTA+AGG | - | Chr8:74270866-74270885 | MsG0880046516.01.T01:CDS | 30.0% |
| ! | GTCATTAGTTAAAGTACTCA+TGG | - | Chr8:74271694-74271713 | MsG0880046516.01.T01:CDS | 30.0% |
| ! | TGAGTTGAAATTCAAAGTGA+TGG | - | Chr8:74270834-74270853 | MsG0880046516.01.T01:intron | 30.0% |
| !! | CTAAACATTAGTGATAATGG+TGG | - | Chr8:74271842-74271861 | MsG0880046516.01.T01:CDS | 30.0% |
| AAGTTTGTCTATAGAGAGAC+TGG | - | Chr8:74270969-74270988 | MsG0880046516.01.T01:intron | 35.0% | |
| ATCCAGCATCAGAATTAAAC+GGG | - | Chr8:74272088-74272107 | MsG0880046516.01.T01:CDS | 35.0% | |
| ATTGCCAAAATATCAAGGAG+TGG | + | Chr8:74272060-74272079 | None:intergenic | 35.0% | |
| CTAACGTTTAGTGAAGAAGA+CGG | + | Chr8:74271918-74271937 | None:intergenic | 35.0% | |
| CTCGAATAAATTCTGTTCCA+AGG | + | Chr8:74271064-74271083 | None:intergenic | 35.0% | |
| CTTGGAACAGAATTTATTCG+AGG | - | Chr8:74271062-74271081 | MsG0880046516.01.T01:intron | 35.0% | |
| GAGTATGAAGCTTGAAATGA+TGG | - | Chr8:74271038-74271057 | MsG0880046516.01.T01:intron | 35.0% | |
| GATCCAGCATCAGAATTAAA+CGG | - | Chr8:74272087-74272106 | MsG0880046516.01.T01:CDS | 35.0% | |
| GCAAGAATATGAGTTTCTTG+TGG | - | Chr8:74272134-74272153 | MsG0880046516.01.T01:CDS | 35.0% | |
| GCTATATGGATGGTTATGTA+TGG | - | Chr8:74271793-74271812 | MsG0880046516.01.T01:CDS | 35.0% | |
| GGAACTAGAAACTAAAGATG+TGG | - | Chr8:74270933-74270952 | MsG0880046516.01.T01:CDS | 35.0% | |
| GGTATTTGTCGTGATTTGAT+TGG | - | Chr8:74270647-74270666 | MsG0880046516.01.T01:CDS | 35.0% | |
| GTTTCTTGTGGAAAAACTCA+AGG | - | Chr8:74272146-74272165 | MsG0880046516.01.T01:CDS | 35.0% | |
| TAACTCAGCAATTCTTTGCA+AGG | + | Chr8:74272458-74272477 | None:intergenic | 35.0% | |
| TAGATTGATTGACGAGTTAC+AGG | - | Chr8:74271131-74271150 | MsG0880046516.01.T01:intron | 35.0% | |
| TCAAAAGGTTGAAGAATGGA+TGG | - | Chr8:74271257-74271276 | MsG0880046516.01.T01:intron | 35.0% | |
| TCCATACATAACTGTCCATA+TGG | + | Chr8:74271882-74271901 | None:intergenic | 35.0% | |
| TCCATATGGACAGTTATGTA+TGG | - | Chr8:74271878-74271897 | MsG0880046516.01.T01:CDS | 35.0% | |
| TGAAGAATGGATGGAAAACA+AGG | - | Chr8:74271266-74271285 | MsG0880046516.01.T01:intron | 35.0% | |
| TGCATAAAGTTTCGAGCTTT+AGG | - | Chr8:74270701-74270720 | MsG0880046516.01.T01:intron | 35.0% | |
| TGTCCATATGGAAAACAATG+AGG | + | Chr8:74271870-74271889 | None:intergenic | 35.0% | |
| TTCTTCATTCAGAGAGATGA+TGG | + | Chr8:74271181-74271200 | None:intergenic | 35.0% | |
| ! | AGTTTCATCCTGGATTTTCT+TGG | + | Chr8:74271088-74271107 | None:intergenic | 35.0% |
| ! | CTATTTGCTAGATAAGAGAG+TGG | - | Chr8:74271474-74271493 | MsG0880046516.01.T01:intron | 35.0% |
| ! | GTACCTCATTGTTTTCCATA+TGG | - | Chr8:74271864-74271883 | MsG0880046516.01.T01:CDS | 35.0% |
| ! | GTAGTTCTTTTTCCAACTTC+TGG | + | Chr8:74270607-74270626 | None:intergenic | 35.0% |
| !! | AGTTTCTAGTTCCTGAATCA+AGG | + | Chr8:74270926-74270945 | None:intergenic | 35.0% |
| !! | CTAAACGTTAGTGATAATGG+TGG | - | Chr8:74271927-74271946 | MsG0880046516.01.T01:CDS | 35.0% |
| !! | TTTCTTCTAGAGTTTCATCC+TGG | + | Chr8:74271098-74271117 | None:intergenic | 35.0% |
| AAACTGAGACTCTAATGCCA+TGG | + | Chr8:74271010-74271029 | None:intergenic | 40.0% | |
| ACACATGTTCAATGCAAGCA+CGG | + | Chr8:74272435-74272454 | None:intergenic | 40.0% | |
| AGAGCAGTTTACCTTGATTC+AGG | - | Chr8:74270912-74270931 | MsG0880046516.01.T01:CDS | 40.0% | |
| AGAGGACTTAGTTCAGGAAA+TGG | - | Chr8:74272360-74272379 | MsG0880046516.01.T01:CDS | 40.0% | |
| AGTTTCCTGTGAGCAAAGAA+AGG | - | Chr8:74271310-74271329 | MsG0880046516.01.T01:intron | 40.0% | |
| CTCATATTCTTGCATCTGAC+AGG | + | Chr8:74272127-74272146 | None:intergenic | 40.0% | |
| GAATGGATGGAAAACAAGGA+TGG | - | Chr8:74271270-74271289 | MsG0880046516.01.T01:intron | 40.0% | |
| GCAAAGAATTGCTGAGTTAG+AGG | - | Chr8:74272459-74272478 | MsG0880046516.01.T01:CDS | 40.0% | |
| TTCCCGTTTAATTCTGATGC+TGG | + | Chr8:74272093-74272112 | None:intergenic | 40.0% | |
| ! | AGAAGTTTTCAGCTTAAGGG+AGG | - | Chr8:74270870-74270889 | MsG0880046516.01.T01:CDS | 40.0% |
| ! | CAAGGTAAACTGCTCTGAAT+TGG | + | Chr8:74270908-74270927 | None:intergenic | 40.0% |
| AATTGCTGAGTTAGAGGCTC+GGG | - | Chr8:74272465-74272484 | MsG0880046516.01.T01:CDS | 45.0% | |
| AGAAGCAGAGGACTTAGTTC+AGG | - | Chr8:74272354-74272373 | MsG0880046516.01.T01:CDS | 45.0% | |
| ATTCGAGGCCAAGAAAATCC+AGG | - | Chr8:74271077-74271096 | MsG0880046516.01.T01:intron | 45.0% | |
| CTTCTAGCAGACCTGTAAGT+TGG | + | Chr8:74272399-74272418 | None:intergenic | 45.0% | |
| GAAGCTTGAAATGATGGCCT+TGG | - | Chr8:74271044-74271063 | MsG0880046516.01.T01:intron | 45.0% | |
| GAATTGCTGAGTTAGAGGCT+CGG | - | Chr8:74272464-74272483 | MsG0880046516.01.T01:CDS | 45.0% | |
| GAGCTGAGATACCAACTTAC+AGG | - | Chr8:74272385-74272404 | MsG0880046516.01.T01:CDS | 45.0% | |
| TTGCTCCTTTCTTTGCTCAC+AGG | + | Chr8:74271318-74271337 | None:intergenic | 45.0% | |
| ! | GGATGAATCGTTTTCGTCCA+TGG | - | Chr8:74270990-74271009 | MsG0880046516.01.T01:intron | 45.0% |
| ! | GGGTCCACTCCTTGATATTT+TGG | - | Chr8:74272053-74272072 | MsG0880046516.01.T01:CDS | 45.0% |
| !! | CAAGGATGGACTGCAAATCA+AGG | - | Chr8:74271284-74271303 | MsG0880046516.01.T01:intron | 45.0% |
| GAGGGCAAAAGAAGAAGCAG+AGG | - | Chr8:74272342-74272361 | MsG0880046516.01.T01:intron | 50.0% | |
| GGAGCAAAGCAGATGACACA+AGG | - | Chr8:74271331-74271350 | MsG0880046516.01.T01:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 74270530 | 74272492 | 74270530 | ID=MsG0880046516.01;Name=MsG0880046516.01 |
| Chr8 | mRNA | 74270530 | 74272492 | 74270530 | ID=MsG0880046516.01.T01;Parent=MsG0880046516.01;Name=MsG0880046516.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0.66|0.5|1|0.66|0.75|4|0|347 |
| Chr8 | exon | 74272345 | 74272492 | 74272345 | ID=MsG0880046516.01.T01:exon:30925;Parent=MsG0880046516.01.T01 |
| Chr8 | exon | 74271670 | 74272258 | 74271670 | ID=MsG0880046516.01.T01:exon:30924;Parent=MsG0880046516.01.T01 |
| Chr8 | exon | 74270855 | 74270987 | 74270855 | ID=MsG0880046516.01.T01:exon:30923;Parent=MsG0880046516.01.T01 |
| Chr8 | exon | 74270530 | 74270703 | 74270530 | ID=MsG0880046516.01.T01:exon:30922;Parent=MsG0880046516.01.T01 |
| Chr8 | CDS | 74272345 | 74272492 | 74272345 | ID=MsG0880046516.01.T01:cds;Parent=MsG0880046516.01.T01 |
| Chr8 | CDS | 74271670 | 74272258 | 74271670 | ID=MsG0880046516.01.T01:cds;Parent=MsG0880046516.01.T01 |
| Chr8 | CDS | 74270855 | 74270987 | 74270855 | ID=MsG0880046516.01.T01:cds;Parent=MsG0880046516.01.T01 |
| Chr8 | CDS | 74270530 | 74270703 | 74270530 | ID=MsG0880046516.01.T01:cds;Parent=MsG0880046516.01.T01 |
| Gene Sequence |
| Protein sequence |
