Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0036260 | sp|Q8CIA9|MF14B_MOUSE | 27.190 | 331 | 217 | 7 | 55 | 378 | 83 | 396 | 5.51e-25 | 113 |
| Msa0036260 | sp|Q8CIA9|MF14B_MOUSE | 25.833 | 360 | 237 | 8 | 456 | 802 | 83 | 425 | 1.52e-21 | 102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024650 | Msa0036260 | 0.801060 | 1.076017e-48 | -8.615850e-47 |
| Msa0036260 | Msa0038010 | 0.822229 | 2.649305e-53 | -8.615850e-47 |
| Msa0036260 | Msa0084190 | 0.894173 | 3.161956e-75 | -8.615850e-47 |
| Msa0036260 | Msa0130350 | 0.836308 | 1.009570e-56 | -8.615850e-47 |
| Msa0036260 | Msa0130360 | 0.887089 | 1.938392e-72 | -8.615850e-47 |
| Msa0036260 | Msa0136090 | 0.828371 | 9.329222e-55 | -8.615850e-47 |
| Msa0036260 | Msa0188560 | 0.801003 | 1.105219e-48 | -8.615850e-47 |
| Msa0036260 | Msa0223040 | 0.811550 | 6.620664e-51 | -8.615850e-47 |
| Msa0036260 | Msa0224870 | 0.818975 | 1.480666e-52 | -8.615850e-47 |
| Msa0036260 | Msa0230920 | 0.815909 | 7.258404e-52 | -8.615850e-47 |
| Msa0036260 | Msa0245660 | 0.804216 | 2.402726e-49 | -8.615850e-47 |
| Msa0036260 | Msa0247780 | 0.806055 | 9.906755e-50 | -8.615850e-47 |
| Msa0036260 | Msa0264230 | 0.810232 | 1.277066e-50 | -8.615850e-47 |
| Msa0036260 | Msa0277320 | 0.810209 | 1.291648e-50 | -8.615850e-47 |
| Msa0036260 | Msa0303900 | 0.807053 | 6.098016e-50 | -8.615850e-47 |
| Msa0036260 | Msa0325260 | 0.800771 | 1.232787e-48 | -8.615850e-47 |
| Msa0036260 | Msa0333770 | 0.808552 | 2.927867e-50 | -8.615850e-47 |
| Msa0036260 | Msa0357470 | 0.806882 | 6.627994e-50 | -8.615850e-47 |
| Msa0036260 | Msa0357510 | 0.809336 | 1.989533e-50 | -8.615850e-47 |
| Msa0036260 | Msa0357530 | 0.806389 | 8.423749e-50 | -8.615850e-47 |
| Msa0036260 | Msa0364550 | 0.805279 | 1.440986e-49 | -8.615850e-47 |
| Msa0036260 | Msa0384170 | 0.801076 | 1.067826e-48 | -8.615850e-47 |
| Msa0036260 | Msa0433090 | 0.816602 | 5.081474e-52 | -8.615850e-47 |
| Msa0036260 | Msa0436810 | 0.813828 | 2.100528e-51 | -8.615850e-47 |
| Msa0036260 | Msa0444210 | 0.811582 | 6.515268e-51 | -8.615850e-47 |
| Msa0036260 | Msa0459930 | 0.801240 | 9.884176e-49 | -8.615850e-47 |
| Msa0036260 | Msa0464620 | 0.800875 | 1.173688e-48 | -8.615850e-47 |
| Msa0036260 | Msa0524710 | 0.816033 | 6.811219e-52 | -8.615850e-47 |
| Msa0036260 | Msa0530660 | 0.810187 | 1.305434e-50 | -8.615850e-47 |
| Msa0036260 | Msa0567570 | 0.809223 | 2.104383e-50 | -8.615850e-47 |
| Msa0036260 | Msa0568920 | 0.814997 | 1.158141e-51 | -8.615850e-47 |
| Msa0036260 | Msa0587180 | 0.808297 | 3.319408e-50 | -8.615850e-47 |
| Msa0036260 | Msa0587930 | 0.803472 | 3.429167e-49 | -8.615850e-47 |
| Msa0036260 | Msa0622890 | 0.806441 | 8.212400e-50 | -8.615850e-47 |
| Msa0036260 | Msa0626980 | 0.814234 | 1.708893e-51 | -8.615850e-47 |
| Msa0036260 | Msa0627360 | 0.813738 | 2.198935e-51 | -8.615850e-47 |
| Msa0036260 | Msa0673940 | 0.813367 | 2.653605e-51 | -8.615850e-47 |
| Msa0036260 | Msa0685390 | -0.816631 | 5.006237e-52 | -8.615850e-47 |
| Msa0036260 | Msa0689840 | 0.801954 | 7.055382e-49 | -8.615850e-47 |
| Msa0036260 | Msa0711230 | 0.835640 | 1.492039e-56 | -8.615850e-47 |
| Msa0036260 | Msa0730890 | 0.807911 | 4.010338e-50 | -8.615850e-47 |
| Msa0036260 | Msa0743370 | 0.806045 | 9.952706e-50 | -8.615850e-47 |
| Msa0036260 | Msa0776340 | 0.802050 | 6.741573e-49 | -8.615850e-47 |
| Msa0036260 | Msa0812610 | 0.803686 | 3.097037e-49 | -8.615850e-47 |
| Msa0036260 | Msa0812720 | 0.800615 | 1.326633e-48 | -8.615850e-47 |
| Msa0036260 | Msa0813840 | 0.811512 | 6.745699e-51 | -8.615850e-47 |
| Msa0036260 | Msa0838210 | 0.804168 | 2.458573e-49 | -8.615850e-47 |
| Msa0036260 | Msa0846870 | 0.809923 | 1.488401e-50 | -8.615850e-47 |
| Msa0036260 | Msa0847140 | 0.827448 | 1.555782e-54 | -8.615850e-47 |
| Msa0036260 | Msa0871420 | 0.819612 | 1.060158e-52 | -8.615850e-47 |
| Msa0036260 | Msa0936630 | 0.800676 | 1.288619e-48 | -8.615850e-47 |
| Msa0036260 | Msa1031060 | 0.814170 | 1.765446e-51 | -8.615850e-47 |
| Msa0036260 | Msa1036590 | 0.813119 | 3.007424e-51 | -8.615850e-47 |
| Msa0036260 | Msa1076900 | 0.816831 | 4.513765e-52 | -8.615850e-47 |
| Msa0036260 | Msa1085820 | 0.820946 | 5.243337e-53 | -8.615850e-47 |
| Msa0036260 | Msa1100330 | 0.821441 | 4.031864e-53 | -8.615850e-47 |
| Msa0036260 | Msa1104020 | -0.803653 | 3.146014e-49 | -8.615850e-47 |
| Msa0036260 | Msa1119670 | 0.825684 | 4.099661e-54 | -8.615850e-47 |
| Msa0036260 | Msa1124220 | 0.814058 | 1.868778e-51 | -8.615850e-47 |
| Msa0036260 | Msa1163710 | 0.804851 | 1.771199e-49 | -8.615850e-47 |
| Msa0036260 | Msa1191530 | -0.801071 | 1.070233e-48 | -8.615850e-47 |
| Msa0036260 | Msa1203650 | 0.808633 | 2.814172e-50 | -8.615850e-47 |
| Msa0036260 | Msa1205120 | 0.813527 | 2.446847e-51 | -8.615850e-47 |
| Msa0036260 | Msa1259570 | 0.818025 | 2.430678e-52 | -8.615850e-47 |
| Msa0036260 | Msa1263110 | 0.804541 | 2.056201e-49 | -8.615850e-47 |
| Msa0036260 | Msa1265940 | 0.804379 | 2.221964e-49 | -8.615850e-47 |
| Msa0036260 | Msa1268360 | 0.800600 | 1.335493e-48 | -8.615850e-47 |
| Msa0036260 | Msa1269500 | 0.808993 | 2.357201e-50 | -8.615850e-47 |
| Msa0036260 | Msa1273320 | 0.816880 | 4.400959e-52 | -8.615850e-47 |
| Msa0036260 | Msa1281780 | 0.800251 | 1.573406e-48 | -8.615850e-47 |
| Msa0036260 | Msa1286860 | -0.805289 | 1.434146e-49 | -8.615850e-47 |
| Msa0036260 | Msa1290090 | -0.801698 | 7.963812e-49 | -8.615850e-47 |
| Msa0036260 | Msa1295210 | -0.819542 | 1.099531e-52 | -8.615850e-47 |
| Msa0036260 | Msa1338510 | 0.812897 | 3.364698e-51 | -8.615850e-47 |
| Msa0036260 | Msa1339530 | 0.922877 | 5.549224e-89 | -8.615850e-47 |
| Msa0036260 | Msa1357840 | 0.808337 | 3.254353e-50 | -8.615850e-47 |
| Msa0036260 | Msa1364690 | 0.813351 | 2.675373e-51 | -8.615850e-47 |
| Msa0036260 | Msa1377190 | 0.801699 | 7.961023e-49 | -8.615850e-47 |
| Msa0036260 | Msa1377460 | 0.818258 | 2.153433e-52 | -8.615850e-47 |
| Msa0036260 | Msa1384130 | 0.806677 | 7.323570e-50 | -8.615850e-47 |
| Msa0036260 | Msa1417220 | 0.805100 | 1.571149e-49 | -8.615850e-47 |
| Msa0036260 | Msa1431020 | 0.802025 | 6.824128e-49 | -8.615850e-47 |
| Msa0036260 | Msa1437590 | 0.817230 | 3.672732e-52 | -8.615850e-47 |
| Msa0036260 | Msa1458270 | 0.800130 | 1.664618e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0036260 | MtrunA17_Chr1g0198441 | 89.593 | 442 | 16 | 1 | 402 | 813 | 1 | 442 | 0.0 | 791 |
| Msa0036260 | MtrunA17_Chr1g0198441 | 87.335 | 379 | 48 | 0 | 1 | 379 | 1 | 379 | 0.0 | 676 |
| Msa0036260 | MtrunA17_Chr1g0198451 | 97.625 | 379 | 9 | 0 | 1 | 379 | 1 | 379 | 0.0 | 748 |
| Msa0036260 | MtrunA17_Chr1g0198451 | 80.995 | 442 | 53 | 2 | 402 | 813 | 1 | 441 | 0.0 | 713 |
| Msa0036260 | MtrunA17_Chr1g0211401 | 35.294 | 391 | 243 | 3 | 411 | 793 | 4 | 392 | 3.60e-73 | 246 |
| Msa0036260 | MtrunA17_Chr1g0211401 | 35.884 | 379 | 231 | 3 | 10 | 379 | 4 | 379 | 5.44e-73 | 245 |
| Msa0036260 | MtrunA17_Chr3g0143461 | 33.728 | 338 | 213 | 2 | 465 | 791 | 3 | 340 | 5.56e-60 | 208 |
| Msa0036260 | MtrunA17_Chr3g0143461 | 33.898 | 354 | 218 | 3 | 64 | 406 | 3 | 351 | 1.81e-59 | 206 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0036260 | AT5G42210.2 | 36.458 | 384 | 226 | 4 | 414 | 783 | 10 | 389 | 1.12e-76 | 254 |
| Msa0036260 | AT5G42210.2 | 35.013 | 377 | 235 | 2 | 13 | 379 | 10 | 386 | 2.14e-72 | 243 |
| Msa0036260 | AT5G42210.1 | 36.458 | 384 | 226 | 4 | 414 | 783 | 10 | 389 | 3.56e-76 | 254 |
| Msa0036260 | AT5G42210.1 | 35.013 | 377 | 235 | 2 | 13 | 379 | 10 | 386 | 8.21e-72 | 242 |
| Msa0036260 | AT2G16980.1 | 33.085 | 402 | 240 | 5 | 409 | 783 | 19 | 418 | 9.47e-63 | 217 |
| Msa0036260 | AT2G16980.1 | 32.266 | 406 | 230 | 3 | 8 | 378 | 19 | 414 | 3.85e-60 | 210 |
| Msa0036260 | AT2G16980.2 | 32.767 | 412 | 248 | 5 | 409 | 793 | 4 | 413 | 1.45e-62 | 218 |
| Msa0036260 | AT2G16980.2 | 32.266 | 406 | 230 | 3 | 8 | 378 | 4 | 399 | 9.79e-60 | 210 |
| Msa0036260 | AT2G16980.4 | 32.767 | 412 | 248 | 5 | 409 | 793 | 19 | 428 | 1.60e-62 | 218 |
| Msa0036260 | AT2G16980.4 | 32.266 | 406 | 230 | 3 | 8 | 378 | 19 | 414 | 1.28e-59 | 210 |
| Msa0036260 | AT2G16980.3 | 32.767 | 412 | 248 | 5 | 409 | 793 | 19 | 428 | 1.89e-62 | 218 |
| Msa0036260 | AT2G16980.3 | 32.266 | 406 | 230 | 3 | 8 | 378 | 19 | 414 | 1.69e-59 | 210 |
| Msa0036260 | AT2G16970.4 | 32.500 | 400 | 245 | 3 | 409 | 783 | 4 | 403 | 3.03e-61 | 213 |
| Msa0036260 | AT2G16970.4 | 31.818 | 396 | 245 | 3 | 8 | 378 | 4 | 399 | 8.48e-59 | 206 |
| Msa0036260 | AT2G16970.7 | 32.500 | 400 | 245 | 3 | 409 | 783 | 4 | 403 | 3.03e-61 | 213 |
| Msa0036260 | AT2G16970.7 | 31.818 | 396 | 245 | 3 | 8 | 378 | 4 | 399 | 8.48e-59 | 206 |
| Msa0036260 | AT2G16970.3 | 32.500 | 400 | 245 | 3 | 409 | 783 | 4 | 403 | 6.48e-61 | 213 |
| Msa0036260 | AT2G16970.3 | 31.818 | 396 | 245 | 3 | 8 | 378 | 4 | 399 | 1.84e-58 | 206 |
| Msa0036260 | AT2G16970.2 | 32.353 | 408 | 251 | 3 | 409 | 791 | 4 | 411 | 8.75e-61 | 213 |
| Msa0036260 | AT2G16970.2 | 31.818 | 396 | 245 | 3 | 8 | 378 | 4 | 399 | 4.61e-58 | 206 |
| Msa0036260 | AT2G16980.5 | 30.930 | 430 | 240 | 6 | 409 | 783 | 19 | 446 | 1.08e-57 | 204 |
| Msa0036260 | AT2G16980.5 | 30.184 | 434 | 230 | 4 | 8 | 378 | 19 | 442 | 3.66e-55 | 197 |
| Msa0036260 | AT2G16990.4 | 31.061 | 396 | 243 | 6 | 414 | 783 | 8 | 399 | 5.51e-57 | 201 |
| Msa0036260 | AT2G16990.4 | 29.639 | 388 | 251 | 2 | 13 | 378 | 8 | 395 | 4.12e-54 | 193 |
| Msa0036260 | AT2G16990.6 | 31.061 | 396 | 243 | 6 | 414 | 783 | 8 | 399 | 5.51e-57 | 201 |
| Msa0036260 | AT2G16990.6 | 29.639 | 388 | 251 | 2 | 13 | 378 | 8 | 395 | 4.12e-54 | 193 |
| Msa0036260 | AT2G16990.7 | 30.788 | 406 | 251 | 6 | 414 | 793 | 8 | 409 | 6.68e-57 | 202 |
| Msa0036260 | AT2G16990.7 | 29.639 | 388 | 251 | 2 | 13 | 378 | 8 | 395 | 1.26e-53 | 192 |
| Msa0036260 | AT2G16990.1 | 30.788 | 406 | 251 | 6 | 414 | 793 | 8 | 409 | 8.31e-57 | 202 |
| Msa0036260 | AT2G16990.1 | 29.639 | 388 | 251 | 2 | 13 | 378 | 8 | 395 | 1.75e-53 | 192 |
| Msa0036260 | AT2G16990.2 | 30.788 | 406 | 251 | 6 | 414 | 793 | 8 | 409 | 8.31e-57 | 202 |
| Msa0036260 | AT2G16990.2 | 29.639 | 388 | 251 | 2 | 13 | 378 | 8 | 395 | 1.75e-53 | 192 |
| Msa0036260 | AT2G16970.6 | 33.046 | 348 | 208 | 3 | 409 | 731 | 4 | 351 | 2.62e-54 | 193 |
| Msa0036260 | AT2G16970.6 | 31.300 | 377 | 234 | 3 | 8 | 359 | 4 | 380 | 3.22e-53 | 190 |
| Msa0036260 | AT2G16970.8 | 33.046 | 348 | 208 | 3 | 409 | 731 | 4 | 351 | 2.82e-54 | 192 |
| Msa0036260 | AT2G16970.8 | 32.184 | 348 | 211 | 3 | 8 | 330 | 4 | 351 | 8.00e-52 | 186 |
| Msa0036260 | AT2G16970.1 | 33.046 | 348 | 208 | 3 | 409 | 731 | 4 | 351 | 2.88e-54 | 192 |
| Msa0036260 | AT2G16970.1 | 30.749 | 387 | 236 | 5 | 8 | 368 | 4 | 384 | 2.36e-52 | 187 |
| Msa0036260 | AT2G16990.3 | 31.519 | 349 | 211 | 5 | 414 | 736 | 8 | 354 | 2.66e-48 | 176 |
| Msa0036260 | AT2G16990.3 | 28.994 | 338 | 218 | 2 | 13 | 328 | 8 | 345 | 9.65e-45 | 166 |
| Msa0036260 | AT2G16990.5 | 31.519 | 349 | 211 | 5 | 414 | 736 | 8 | 354 | 2.66e-48 | 176 |
| Msa0036260 | AT2G16990.5 | 28.994 | 338 | 218 | 2 | 13 | 328 | 8 | 345 | 9.65e-45 | 166 |
| Msa0036260 | AT2G16990.8 | 29.803 | 406 | 228 | 7 | 414 | 793 | 8 | 382 | 3.57e-47 | 174 |
| Msa0036260 | AT2G16990.8 | 28.608 | 388 | 228 | 3 | 13 | 378 | 8 | 368 | 3.83e-44 | 165 |
| Msa0036260 | AT2G16980.6 | 30.640 | 297 | 178 | 4 | 523 | 793 | 1 | 295 | 8.49e-34 | 133 |
| Msa0036260 | AT2G16980.6 | 30.928 | 291 | 157 | 2 | 122 | 378 | 1 | 281 | 1.04e-32 | 130 |
| Msa0036260 | AT2G16970.5 | 35.882 | 170 | 108 | 1 | 409 | 577 | 4 | 173 | 1.07e-27 | 115 |
| Msa0036260 | AT2G16970.5 | 34.706 | 170 | 110 | 1 | 8 | 176 | 4 | 173 | 1.40e-26 | 112 |
| Msa0036260 | AT2G16970.5 | 33.766 | 154 | 102 | 0 | 638 | 791 | 151 | 304 | 1.82e-18 | 88.6 |
| Msa0036260 | AT2G16970.5 | 37.097 | 124 | 78 | 0 | 255 | 378 | 169 | 292 | 4.48e-18 | 87.0 |
Find 140 sgRNAs with CRISPR-Local
Find 493 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGTGTAGGCTTGGCTTTC+TGG | 0.046732 | 1_1:-64719912 | Msa0036260:intron |
| TTGGTGTAGGCTTGGCTTTC+TGG | 0.046732 | 1_1:-64725887 | Msa0036260:intron |
| TCTAAAGCCATTTACATTAA+TGG | 0.135485 | 1_1:-64727835 | Msa0036260:CDS |
| TTGAAGGCCATTAATGTAAA+TGG | 0.185592 | 1_1:+64727828 | None:intergenic |
| TTTCTTTCCTTCTAGATTAC+TGG | 0.206606 | 1_1:-64721493 | Msa0036260:intron |
| TCTTCTGCTGCACATGTTAT+TGG | 0.211223 | 1_1:-64720918 | Msa0036260:CDS |
| GATGATGGTACTTCCAATAT+TGG | 0.245812 | 1_1:-64727699 | Msa0036260:CDS |
| AACAAAAGGGCAGCAGTATT+TGG | 0.253401 | 1_1:-64726983 | Msa0036260:CDS |
| GCTGGGGCAAATTCAATATC+TGG | 0.260798 | 1_1:-64719358 | Msa0036260:CDS |
| GATGGTGATACTTCCACTTT+TGG | 0.272058 | 1_1:-64721461 | Msa0036260:CDS |
| ACTTGCTTGGAATCAATCTA+AGG | 0.285147 | 1_1:-64721171 | Msa0036260:CDS |
| CCAAATGAGGCACTTAAATA+TGG | 0.298481 | 1_1:+64725562 | None:intergenic |
| GAAATTACCAAAAGGAAATA+TGG | 0.304389 | 1_1:+64727619 | None:intergenic |
| CTTCTGCTGCACATGTTATT+GGG | 0.317775 | 1_1:-64720917 | Msa0036260:CDS |
| AGGTATTATACTGGTGGATA+TGG | 0.324040 | 1_1:+64721393 | None:intergenic |
| GCTTCCAATACTTAATCCTT+TGG | 0.325570 | 1_1:-64720059 | Msa0036260:CDS |
| TCCACCACCATATTTCCTTT+TGG | 0.332298 | 1_1:-64727626 | Msa0036260:intron |
| GCCATTGATGTAAATAGCTT+TGG | 0.356157 | 1_1:+64721621 | None:intergenic |
| TCTGAAAGCTGACCCAATAT+TGG | 0.359918 | 1_1:+64727686 | None:intergenic |
| AGGAAGAATTGCATATAAAC+TGG | 0.362320 | 1_1:+64726744 | None:intergenic |
| CCATACTTAGGTGGCTCATT+TGG | 0.362701 | 1_1:-64719710 | Msa0036260:CDS |
| CCTAGTTGAAACTGTGAAAC+TGG | 0.363738 | 1_1:-64720695 | Msa0036260:CDS |
| GGAAGTAACAAGTGGAATAA+AGG | 0.370458 | 1_1:+64721736 | None:intergenic |
| TCCACCAGTATAATACCTTT+TGG | 0.371542 | 1_1:-64721388 | Msa0036260:intron |
| TACTTCCACTAAGCATTCAT+TGG | 0.375771 | 1_1:-64721720 | Msa0036260:CDS |
| TACTTCCACTAAGCATTCAT+TGG | 0.375771 | 1_1:-64727933 | Msa0036260:CDS |
| TTGTTGTAGCTTTACTTGCT+TGG | 0.379609 | 1_1:-64721184 | Msa0036260:intron |
| CCAAATGAGCCACCTAAGTA+TGG | 0.382983 | 1_1:+64719710 | None:intergenic |
| CCGCGGAAATAGTAATCTTC+AGG | 0.389670 | 1_1:-64720591 | Msa0036260:intron |
| CCGCGGAAATAGTAATCTTC+AGG | 0.389670 | 1_1:-64726620 | Msa0036260:intron |
| TTTCTGCTTCACATGTTGTT+GGG | 0.389841 | 1_1:-64726943 | Msa0036260:CDS |
| CTTCTGATGATGGTCGGAAT+TGG | 0.392333 | 1_1:-64720242 | Msa0036260:CDS |
| CTTCTGATGATGGTCGGAAT+TGG | 0.392333 | 1_1:-64726240 | Msa0036260:CDS |
| GCAGTATTTGGTTGGATCAC+TGG | 0.394856 | 1_1:-64726971 | Msa0036260:CDS |
| CCATATTTAAGTGCCTCATT+TGG | 0.394933 | 1_1:-64725562 | Msa0036260:CDS |
| TCATCACTTGAACCAGTATC+AGG | 0.398176 | 1_1:+64718979 | None:intergenic |
| AAAGAGCAGCAGTATTTAGT+TGG | 0.403122 | 1_1:-64720953 | Msa0036260:CDS |
| TGGATTAGCATGGGCACCTT+GGG | 0.405021 | 1_1:-64719892 | Msa0036260:intron |
| TGGATTAGCATGGGCACCTT+GGG | 0.405021 | 1_1:-64725867 | Msa0036260:intron |
| GGAAGTAACAAGTGGAATAA+TGG | 0.425167 | 1_1:+64727949 | None:intergenic |
| GCTAAAACCTTTGCATTCAA+AGG | 0.425492 | 1_1:+64724846 | None:intergenic |
| CTGGATTAGCATGGGCACCT+TGG | 0.432018 | 1_1:-64719893 | Msa0036260:CDS |
| CTGGATTAGCATGGGCACCT+TGG | 0.432018 | 1_1:-64725868 | Msa0036260:CDS |
| CCTAACTCTCGGTTCTTTGT+GGG | 0.432521 | 1_1:+64726699 | None:intergenic |
| AATTCAGAAGCGGGTCTTGT+TGG | 0.432583 | 1_1:+64718941 | None:intergenic |
| ATGATGGTACTTCCAATATT+GGG | 0.434360 | 1_1:-64727698 | Msa0036260:CDS |
| AGCATCAAGCTCAACCAATC+AGG | 0.436087 | 1_1:-64719527 | Msa0036260:intron |
| GCCTAACTCTCGGTTCTTTG+TGG | 0.438887 | 1_1:+64726698 | None:intergenic |
| TCCAAAGCTATTTACATCAA+TGG | 0.440133 | 1_1:-64721622 | Msa0036260:CDS |
| AATTGTGCGAAGCACGTAGT+AGG | 0.440369 | 1_1:+64727167 | None:intergenic |
| TGCATGCTAAATCCTGATAC+TGG | 0.440797 | 1_1:-64718991 | Msa0036260:CDS |
| AGCATCAAGCTCAACCAATC+AGG | 0.446005 | 1_1:-64725210 | Msa0036260:intron |
| ATTACCAAAAGGTATTATAC+TGG | 0.447589 | 1_1:+64721384 | None:intergenic |
| CCAATACTTAATCCATTGGT+TGG | 0.448307 | 1_1:-64726030 | Msa0036260:CDS |
| TTGGTGTAGCTTTACTCGCT+TGG | 0.450338 | 1_1:-64727215 | Msa0036260:intron |
| GCAATCCAATGAATGCTTAG+TGG | 0.451192 | 1_1:+64721715 | None:intergenic |
| GCAATCCAATGAATGCTTAG+TGG | 0.451192 | 1_1:+64727928 | None:intergenic |
| TAATACATACTGTTTCTTGA+AGG | 0.453003 | 1_1:+64727812 | None:intergenic |
| CCAACCAATGGATTAAGTAT+TGG | 0.453351 | 1_1:+64726030 | None:intergenic |
| CCAATACTTAATCCTTTGGT+TGG | 0.453681 | 1_1:-64720055 | Msa0036260:CDS |
| CCCACAAAGAACCGAGAGTT+AGG | 0.454303 | 1_1:-64726699 | Msa0036260:CDS |
| ACTTCCAATACTTAATCCAT+TGG | 0.457054 | 1_1:-64726034 | Msa0036260:CDS |
| ATGTTGTCAATGAAAACAAA+AGG | 0.465641 | 1_1:-64726997 | Msa0036260:CDS |
| CCAACCAAAGGATTAAGTAT+TGG | 0.467513 | 1_1:+64720055 | None:intergenic |
| ACAGGAAAGAACCAAGAGTT+AGG | 0.467535 | 1_1:-64720670 | Msa0036260:CDS |
| ATATGCTATTGATGCAAGTA+AGG | 0.470324 | 1_1:+64725984 | None:intergenic |
| CTAAAACCTTTGCATTCAAA+GGG | 0.470696 | 1_1:+64724847 | None:intergenic |
| CTTGGCTTTCTGGATTAGCA+TGG | 0.472037 | 1_1:-64719902 | Msa0036260:CDS |
| CTTGGCTTTCTGGATTAGCA+TGG | 0.472037 | 1_1:-64725877 | Msa0036260:CDS |
| CCAGTTTCACAGTTTCAACT+AGG | 0.478479 | 1_1:+64720695 | None:intergenic |
| AAAAGGAAAACAAACCTGAT+TGG | 0.480429 | 1_1:+64719513 | None:intergenic |
| ACATGTTGTTGGGAACGTCT+TGG | 0.481757 | 1_1:-64726933 | Msa0036260:CDS |
| TTGAAAATTTACCAGCAAAA+CGG | 0.486254 | 1_1:+64726411 | None:intergenic |
| TAATACATACTGTTTGTTGA+AGG | 0.491556 | 1_1:+64721599 | None:intergenic |
| TGGAGCAAGATGATTGTTGA+GGG | 0.492964 | 1_1:+64721641 | None:intergenic |
| AAATGTGCGAAGCACATAGT+AGG | 0.495737 | 1_1:+64721136 | None:intergenic |
| GTTCTCAGAACTTCTGATGA+TGG | 0.496970 | 1_1:-64720252 | Msa0036260:CDS |
| TTGGCTTTCTGGATTAGCAT+GGG | 0.498516 | 1_1:-64719901 | Msa0036260:CDS |
| TTGGCTTTCTGGATTAGCAT+GGG | 0.498516 | 1_1:-64725876 | Msa0036260:CDS |
| ATTCTCAGAACTTCTGATGA+TGG | 0.499366 | 1_1:-64726250 | Msa0036260:CDS |
| CTGCATTTCTGTCGCGTATG+TGG | 0.504768 | 1_1:-64721084 | Msa0036260:intron |
| CTGCATCTCTGTCGCGTATG+TGG | 0.504768 | 1_1:-64727115 | Msa0036260:intron |
| ATCAGTTATAATTCAGAAGC+GGG | 0.507005 | 1_1:+64718932 | None:intergenic |
| CAGTCCTACATTAAGAGGCA+TGG | 0.507024 | 1_1:-64726479 | Msa0036260:CDS |
| GCAGTATTTAGTTGGATCAC+TGG | 0.507206 | 1_1:-64720945 | Msa0036260:CDS |
| AAAAGGACAACAAACCTGAT+TGG | 0.508525 | 1_1:+64725196 | None:intergenic |
| AAAGGGCAGCAGTATTTGGT+TGG | 0.512553 | 1_1:-64726979 | Msa0036260:CDS |
| TTATTGGGAATGTCTTTGCT+CGG | 0.513595 | 1_1:-64720902 | Msa0036260:CDS |
| AGGAAGAAATGCATATAAAG+TGG | 0.514915 | 1_1:+64720715 | None:intergenic |
| TCTGAAAGCTGACCCAAAAG+TGG | 0.523725 | 1_1:+64721448 | None:intergenic |
| GAAACTGTGAAACTGGATAC+AGG | 0.524268 | 1_1:-64720688 | Msa0036260:CDS |
| ATCACTTTCTCTCCAACCAA+TGG | 0.535617 | 1_1:+64726018 | None:intergenic |
| GACATAGTAACAAGGAGTAA+AGG | 0.535836 | 1_1:+64727647 | None:intergenic |
| TACTGGTGGATATGGTAAGA+AGG | 0.538200 | 1_1:+64721401 | None:intergenic |
| GACATAGATAATGCCAAATG+AGG | 0.541816 | 1_1:+64725549 | None:intergenic |
| ATCACTTTCTCTCCAACCAA+AGG | 0.544791 | 1_1:+64720043 | None:intergenic |
| GACGAAGATACAAATCTATG+AGG | 0.550040 | 1_1:-64720618 | Msa0036260:CDS |
| ATTTCGTATATAATCAGTAA+AGG | 0.551876 | 1_1:-64727147 | Msa0036260:CDS |
| CTATGGCAGGTACCATACTT+AGG | 0.555359 | 1_1:-64719722 | Msa0036260:intron |
| TGTTGTCAATGAAAACAAAA+GGG | 0.564808 | 1_1:-64726996 | Msa0036260:CDS |
| AGAAACATGTCGTGGTGGAG+TGG | 0.565655 | 1_1:-64721775 | Msa0036260:CDS |
| AGAAACATGTCGTGGTGGAG+TGG | 0.565655 | 1_1:-64727988 | None:intergenic |
| TTGGAGCAAGATGATTGTTG+AGG | 0.568723 | 1_1:+64721640 | None:intergenic |
| AGAGCCATGCCTCTTAATGT+AGG | 0.570142 | 1_1:+64726475 | None:intergenic |
| GGAGTGGATTCTTTGAGCTG+AGG | 0.571185 | 1_1:-64721759 | Msa0036260:CDS |
| TTCAAGTGATGATGACTTGG+AGG | 0.573020 | 1_1:-64718968 | Msa0036260:CDS |
| TTAGAACAAGATGATTGTTG+AGG | 0.578044 | 1_1:+64727853 | None:intergenic |
| CAGTCCTGCATTAAGAGGCG+TGG | 0.579001 | 1_1:-64720491 | Msa0036260:CDS |
| GATATGGTAAGAAGGAGTAG+AGG | 0.581219 | 1_1:+64721409 | None:intergenic |
| TCAGAACTTCTGATGATGGT+CGG | 0.583866 | 1_1:-64726246 | Msa0036260:CDS |
| GACGAAGATATAAATCTATG+AGG | 0.587114 | 1_1:-64726647 | Msa0036260:CDS |
| TACTCACAGCAGGTTTCTCA+AGG | 0.587481 | 1_1:+64719675 | None:intergenic |
| TCAGAACTTCTGATGATGGT+CGG | 0.592201 | 1_1:-64720248 | Msa0036260:CDS |
| CAGCAAAACACTGTGTATGC+CGG | 0.594917 | 1_1:+64720435 | None:intergenic |
| AGAGCCACGCCTCTTAATGC+AGG | 0.599418 | 1_1:+64720487 | None:intergenic |
| TAGTACAGAAGCCTAACTCT+TGG | 0.599829 | 1_1:+64720659 | None:intergenic |
| GATGCTCCCTTTGAATGCAA+AGG | 0.600708 | 1_1:-64724853 | Msa0036260:CDS |
| ACCAAAAGGAAATATGGTGG+TGG | 0.601761 | 1_1:+64727625 | None:intergenic |
| TAGAGCAGAAGCCTAACTCT+CGG | 0.608553 | 1_1:+64726688 | None:intergenic |
| ACCAAAAGGTATTATACTGG+TGG | 0.609503 | 1_1:+64721387 | None:intergenic |
| TGCTTAGTGGAAGTAACAAG+TGG | 0.613388 | 1_1:+64721728 | None:intergenic |
| TGCTTAGTGGAAGTAACAAG+TGG | 0.613388 | 1_1:+64727941 | None:intergenic |
| ACTCGCTTGGAATCAATCTG+AGG | 0.614256 | 1_1:-64727202 | Msa0036260:CDS |
| TACTCACAGCTGGTTTCACA+AGG | 0.622027 | 1_1:+64725527 | None:intergenic |
| AATCAGTTATAATTCAGAAG+CGG | 0.622840 | 1_1:+64718931 | None:intergenic |
| TGGTTCAAGTGATGATGACT+TGG | 0.630019 | 1_1:-64718971 | Msa0036260:CDS |
| CCTGAAGATTACTATTTCCG+CGG | 0.635434 | 1_1:+64726620 | None:intergenic |
| CCTGAAGATTACTATTTCCG+CGG | 0.641877 | 1_1:+64720591 | None:intergenic |
| GGTCAGCTTTCAGATGAACA+TGG | 0.646754 | 1_1:-64727677 | Msa0036260:CDS |
| ATTACCAAAAGGAAATATGG+TGG | 0.656790 | 1_1:+64727622 | None:intergenic |
| ATCTCAGAAACATGTCGTGG+TGG | 0.661528 | 1_1:-64721780 | Msa0036260:intron |
| GGTCAGCTTTCAGATGAACA+CGG | 0.662882 | 1_1:-64721439 | Msa0036260:CDS |
| CTCATCTCAGAAACATGTCG+TGG | 0.663073 | 1_1:-64721783 | Msa0036260:intron |
| ATCTCAGAAACATGTCGTGG+TGG | 0.670155 | 1_1:-64727993 | None:intergenic |
| TAAATCTATGAGGAATGCCG+CGG | 0.674285 | 1_1:-64726637 | Msa0036260:CDS |
| CTCATCTCAGAAACATGTCG+TGG | 0.674843 | 1_1:-64727996 | None:intergenic |
| CAAATCTATGAGGAATGCCG+CGG | 0.682083 | 1_1:-64720608 | Msa0036260:CDS |
| TGGCAGGTACCATACTTAGG+TGG | 0.694561 | 1_1:-64719719 | Msa0036260:intron |
| TGGTGGTGGACATAGTAACA+AGG | 0.704832 | 1_1:+64727639 | None:intergenic |
| TTGTTGAGGACATAAAGCAG+TGG | 0.744421 | 1_1:+64727867 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTCTTAATCTAATATAT+TGG | - | chr1_1:64719321-64719340 | Msa0036260:intron | 10.0% |
| !! | ATAATATAATACAAAAAAAG+TGG | + | chr1_1:64721496-64721515 | None:intergenic | 10.0% |
| !! | TAATCAAAATTAATGTAAAA+TGG | + | chr1_1:64721991-64722010 | None:intergenic | 10.0% |
| !! | TGTAGATATATAATTAATTA+AGG | - | chr1_1:64722355-64722374 | Msa0036260:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTGAACA+AGG | - | chr1_1:64722715-64722734 | Msa0036260:intron | 10.0% |
| !! | TGTATTTATCAAAATTATAT+TGG | + | chr1_1:64723537-64723556 | None:intergenic | 10.0% |
| !! | TAATAATAATATTTATCAGT+AGG | + | chr1_1:64723806-64723825 | None:intergenic | 10.0% |
| !!! | TTTATTGATTAAAATTTACA+TGG | - | chr1_1:64724008-64724027 | Msa0036260:intron | 10.0% |
| !!! | TAATAATTTTATCATATATG+AGG | + | chr1_1:64727279-64727298 | None:intergenic | 10.0% |
| !! | TAAAATAAAAATGAGAAAGT+TGG | + | chr1_1:64719149-64719168 | None:intergenic | 15.0% |
| !!! | ATTTTGAATATAAAAACAGA+TGG | - | chr1_1:64719848-64719867 | Msa0036260:intron | 15.0% |
| !!! | TTATTTTTATACTTCTTGTT+AGG | - | chr1_1:64720088-64720107 | Msa0036260:intron | 15.0% |
| !!! | ATTTAATTTGTATACACTAT+CGG | + | chr1_1:64721586-64721605 | None:intergenic | 15.0% |
| !! | AATATGATACATTGTTAATT+TGG | + | chr1_1:64721818-64721837 | None:intergenic | 15.0% |
| !! | ATATATTCATACATATAGTT+GGG | - | chr1_1:64722418-64722437 | Msa0036260:intron | 15.0% |
| !! | ATATAAGAAAAATAGAAAAG+TGG | - | chr1_1:64722466-64722485 | Msa0036260:intron | 15.0% |
| !!! | TAACATGATTTTTAATAACA+AGG | + | chr1_1:64723004-64723023 | None:intergenic | 15.0% |
| !!! | TTTTTTTTACATTTACAACA+AGG | + | chr1_1:64723397-64723416 | None:intergenic | 15.0% |
| !!! | ATAATTTTGATAAATACAGA+TGG | - | chr1_1:64723539-64723558 | Msa0036260:intron | 15.0% |
| !!! | ATTTCTTTGTTTTTTTTTTG+TGG | + | chr1_1:64723944-64723963 | None:intergenic | 15.0% |
| !!! | ACTTTATTTATTTATCTTGA+GGG | + | chr1_1:64724200-64724219 | None:intergenic | 15.0% |
| !!! | AACTTTATTTATTTATCTTG+AGG | + | chr1_1:64724201-64724220 | None:intergenic | 15.0% |
| !! | TTGTTATATTCATATAACAA+CGG | + | chr1_1:64724417-64724436 | None:intergenic | 15.0% |
| !! | TAATAATATATTACTAGTGT+TGG | + | chr1_1:64725360-64725379 | None:intergenic | 15.0% |
| !! | AATATATTATTAATGAGTTG+AGG | - | chr1_1:64725368-64725387 | Msa0036260:intron | 15.0% |
| !!! | TGAAAATTTTGACAATATTT+AGG | + | chr1_1:64726406-64726425 | None:intergenic | 15.0% |
| !! | GAGATAAAGAAAAAAAAAAA+AGG | + | chr1_1:64727422-64727441 | None:intergenic | 15.0% |
| !! | AAATTATATGAAATGATGTT+TGG | + | chr1_1:64727480-64727499 | None:intergenic | 15.0% |
| !! | TCAAAATTAATGCAAAATAA+TGG | + | chr1_1:64727652-64727671 | None:intergenic | 15.0% |
| !! | AGTTATTATATTGTAGTATA+AGG | + | chr1_1:64727677-64727696 | None:intergenic | 15.0% |
| !! | GAAAAATTGAAATTACCAAA+AGG | + | chr1_1:64719307-64719326 | None:intergenic | 20.0% |
| !!! | TTTAAAATCAAACATACGAT+TGG | + | chr1_1:64719423-64719442 | None:intergenic | 20.0% |
| !! | CAATGTTAAGGATAATTTAA+TGG | + | chr1_1:64719534-64719553 | None:intergenic | 20.0% |
| !! | ATTTCGTATATAATCAGTAA+AGG | - | chr1_1:64719768-64719787 | Msa0036260:intron | 20.0% |
| !! | TAGGTTATGAATCTTAATTA+TGG | - | chr1_1:64720107-64720126 | Msa0036260:intron | 20.0% |
| !! | TGAAAAACATTACAGTATTT+AGG | + | chr1_1:64720418-64720437 | None:intergenic | 20.0% |
| !!! | TTCTTAATATATTTTGGTGT+AGG | - | chr1_1:64721015-64721034 | Msa0036260:intron | 20.0% |
| !! | ATCAATTGTACACATATATT+AGG | - | chr1_1:64722320-64722339 | Msa0036260:intron | 20.0% |
| !! | CATATATTCATACATATAGT+TGG | - | chr1_1:64722417-64722436 | Msa0036260:intron | 20.0% |
| !!! | TTTGATCACTTTTTATAGTT+TGG | + | chr1_1:64723114-64723133 | None:intergenic | 20.0% |
| !! | AAATTCAAATTCTTTAAGCA+AGG | + | chr1_1:64723499-64723518 | None:intergenic | 20.0% |
| !! | ACAATACATAATATATGCAA+AGG | - | chr1_1:64723896-64723915 | Msa0036260:intron | 20.0% |
| !! | TTTAACACACTTTCTTTAAT+CGG | + | chr1_1:64724090-64724109 | None:intergenic | 20.0% |
| !! | AAAAAATATGTGTTGAAATG+TGG | - | chr1_1:64724107-64724126 | Msa0036260:intron | 20.0% |
| !! | AAAAATATGTGTTGAAATGT+GGG | - | chr1_1:64724108-64724127 | Msa0036260:intron | 20.0% |
| !! | AAACTATTCACATCAAAATT+TGG | - | chr1_1:64724136-64724155 | Msa0036260:intron | 20.0% |
| !!! | CTTTATTTATTTATCTTGAG+GGG | + | chr1_1:64724199-64724218 | None:intergenic | 20.0% |
| !! | ATAACTTATTTATATACGGT+TGG | + | chr1_1:64725043-64725062 | None:intergenic | 20.0% |
| !! | GGACATAACTTATTTATATA+CGG | + | chr1_1:64725047-64725066 | None:intergenic | 20.0% |
| !!! | CAAATACTAGTATGTTATTT+TGG | - | chr1_1:64725588-64725607 | Msa0036260:intron | 20.0% |
| !! | GTAAATCAACATAAATGTTA+AGG | + | chr1_1:64725657-64725676 | None:intergenic | 20.0% |
| !!! | TTCATAATATATTTTGGTGT+AGG | - | chr1_1:64726990-64727009 | Msa0036260:CDS | 20.0% |
| !! | TAAGCATGTAAATTTGTATA+AGG | + | chr1_1:64721259-64721278 | None:intergenic | 20.0% |
| !! | TACAAATTTACATGCTTATA+TGG | - | chr1_1:64721261-64721280 | Msa0036260:intron | 20.0% |
| !! | AAACTCAATAACTTTCATTA+TGG | + | chr1_1:64727167-64727186 | None:intergenic | 20.0% |
| !! | TTATTGAGTTTAATTCACTA+TGG | - | chr1_1:64727176-64727195 | Msa0036260:CDS | 20.0% |
| !!! | ATTGATTCTAACTATAAAAG+TGG | + | chr1_1:64727303-64727322 | None:intergenic | 20.0% |
| !!! | ACTTTTATAGTTAGAATCAA+TGG | - | chr1_1:64727302-64727321 | Msa0036260:intron | 20.0% |
| !! | AAATATTTAATGGCAATATC+AGG | + | chr1_1:64727336-64727355 | None:intergenic | 20.0% |
| !! | ACATGACAAGAAATATTTAA+TGG | + | chr1_1:64727346-64727365 | None:intergenic | 20.0% |
| !! | TCTAAAGCCATTTACATTAA+TGG | - | chr1_1:64719080-64719099 | Msa0036260:intron | 25.0% |
| !! | TAATACATACTGTTTCTTGA+AGG | + | chr1_1:64719106-64719125 | None:intergenic | 25.0% |
| ! | GAAATTACCAAAAGGAAATA+TGG | + | chr1_1:64719299-64719318 | None:intergenic | 25.0% |
| !!! | GATTGATAGTGTAAAATCTA+TGG | - | chr1_1:64719492-64719511 | Msa0036260:intron | 25.0% |
| ! | TGAAGTAATCAACAATGTTA+AGG | + | chr1_1:64719546-64719565 | None:intergenic | 25.0% |
| ! | ATGTTGTCAATGAAAACAAA+AGG | - | chr1_1:64719918-64719937 | Msa0036260:intron | 25.0% |
| ! | TGTTGTCAATGAAAACAAAA+GGG | - | chr1_1:64719919-64719938 | Msa0036260:intron | 25.0% |
| !! | CTAATTTTACAGTTTCAACT+AGG | + | chr1_1:64720194-64720213 | None:intergenic | 25.0% |
| ! | TTGAAAATTTACCAGCAAAA+CGG | + | chr1_1:64720507-64720526 | None:intergenic | 25.0% |
| ! | ATTTGTCAAATAACACAACA+AGG | + | chr1_1:64720559-64720578 | None:intergenic | 25.0% |
| !!! | TACTATTTGAAAGCTGTTTT+TGG | - | chr1_1:64720627-64720646 | Msa0036260:CDS | 25.0% |
| !! | TTTTGTGATTCTTCTCTATA+AGG | - | chr1_1:64720803-64720822 | Msa0036260:intron | 25.0% |
| !! | GCTCTCTTCTTAATATATTT+TGG | - | chr1_1:64721009-64721028 | Msa0036260:intron | 25.0% |
| !! | TTATCAATTTTACTTACCCA+AGG | + | chr1_1:64721067-64721086 | None:intergenic | 25.0% |
| ! | CTTGAATAAGAAGTTATAAC+AGG | - | chr1_1:64721185-64721204 | Msa0036260:intron | 25.0% |
| ! | GAGAAATTAATTGCAATATC+AGG | + | chr1_1:64721656-64721675 | None:intergenic | 25.0% |
| !! | ATACATTGTTAATTTGGTGA+GGG | + | chr1_1:64721812-64721831 | None:intergenic | 25.0% |
| !! | TTTGCTTTCTCTGAATTTTA+TGG | - | chr1_1:64721836-64721855 | Msa0036260:intron | 25.0% |
| ! | TCATTACTTGAAGGATTATT+AGG | + | chr1_1:64722253-64722272 | None:intergenic | 25.0% |
| ! | TTATAAAGAGTTTGAGAATG+GGG | + | chr1_1:64722541-64722560 | None:intergenic | 25.0% |
| ! | CTTATAAAGAGTTTGAGAAT+GGG | + | chr1_1:64722542-64722561 | None:intergenic | 25.0% |
| ! | ACTTATAAAGAGTTTGAGAA+TGG | + | chr1_1:64722543-64722562 | None:intergenic | 25.0% |
| ! | CGAAAATAAGTTTCATTTGA+GGG | + | chr1_1:64722683-64722702 | None:intergenic | 25.0% |
| ! | TCGAAAATAAGTTTCATTTG+AGG | + | chr1_1:64722684-64722703 | None:intergenic | 25.0% |
| ! | CAAAAAGCCAAAAAAGTTTA+CGG | - | chr1_1:64722797-64722816 | Msa0036260:intron | 25.0% |
| !!! | TATTACACCGTAAACTTTTT+TGG | + | chr1_1:64722807-64722826 | None:intergenic | 25.0% |
| ! | TTACGGTGTAATACAAATAA+AGG | - | chr1_1:64722814-64722833 | Msa0036260:intron | 25.0% |
| !!! | TGCTTTTAGTTATCATTGTT+GGG | + | chr1_1:64722905-64722924 | None:intergenic | 25.0% |
| !!! | TTGCTTTTAGTTATCATTGT+TGG | + | chr1_1:64722906-64722925 | None:intergenic | 25.0% |
| !! | TTTTTATAGTTTGGCCAATT+AGG | + | chr1_1:64723105-64723124 | None:intergenic | 25.0% |
| !! | TTCTTTTATCGAATCCTATT+TGG | + | chr1_1:64723370-64723389 | None:intergenic | 25.0% |
| ! | GTGAAATAGACTATCAAATA+AGG | + | chr1_1:64723420-64723439 | None:intergenic | 25.0% |
| ! | ATTTCACCAAAATTCCTAAT+TGG | - | chr1_1:64723433-64723452 | Msa0036260:intron | 25.0% |
| ! | TAACAAACGAGTCTTAAAAA+AGG | - | chr1_1:64723726-64723745 | Msa0036260:intron | 25.0% |
| ! | AACAAACGAGTCTTAAAAAA+GGG | - | chr1_1:64723727-64723746 | Msa0036260:intron | 25.0% |
| ! | TGAAAAGGCTCTTATAATTA+AGG | - | chr1_1:64723763-64723782 | Msa0036260:intron | 25.0% |
| !!! | GGATCTCATATAATTTTAGT+GGG | + | chr1_1:64724036-64724055 | None:intergenic | 25.0% |
| !! | TGGATCTCATATAATTTTAG+TGG | + | chr1_1:64724037-64724056 | None:intergenic | 25.0% |
| ! | TTAATCGGTTAAAATTCACA+TGG | + | chr1_1:64724075-64724094 | None:intergenic | 25.0% |
| ! | ATAAAGTTATCCTCAAGAAA+TGG | - | chr1_1:64724213-64724232 | Msa0036260:intron | 25.0% |
| !!! | TTCTGAATTTTTTCAACGTT+TGG | - | chr1_1:64724309-64724328 | Msa0036260:intron | 25.0% |
| ! | CTCGGAATTAAATTATTTCA+AGG | + | chr1_1:64724549-64724568 | None:intergenic | 25.0% |
| ! | CTTGAAATAATTTAATTCCG+AGG | - | chr1_1:64724547-64724566 | Msa0036260:intron | 25.0% |
| !! | GAAACACTTTTAAACACATT+TGG | - | chr1_1:64724745-64724764 | Msa0036260:intron | 25.0% |
| ! | CATTTGGCAATAAATTATTG+AGG | - | chr1_1:64724761-64724780 | Msa0036260:intron | 25.0% |
| ! | TCATAAGATAAAGGATAAGA+AGG | + | chr1_1:64724928-64724947 | None:intergenic | 25.0% |
| ! | TTAGAGTGATCATAAGATAA+AGG | + | chr1_1:64724937-64724956 | None:intergenic | 25.0% |
| ! | TTATTTATATACGGTTGGAA+AGG | + | chr1_1:64725038-64725057 | None:intergenic | 25.0% |
| !! | TAATACATACTGTTTGTTGA+AGG | + | chr1_1:64725319-64725338 | None:intergenic | 25.0% |
| !!! | ATTACCAAAAGGTATTATAC+TGG | + | chr1_1:64725534-64725553 | None:intergenic | 25.0% |
| ! | GTGAAATTGTAATTACCAAA+AGG | + | chr1_1:64725545-64725564 | None:intergenic | 25.0% |
| !!! | TTTTGGTTAATCTAATGTGT+TGG | - | chr1_1:64725605-64725624 | Msa0036260:intron | 25.0% |
| !! | ATTTATACTTCCTCTCTTTT+AGG | - | chr1_1:64725918-64725937 | Msa0036260:intron | 25.0% |
| !!! | TTTTTTCTATACTCACTGTT+TGG | - | chr1_1:64726117-64726136 | Msa0036260:intron | 25.0% |
| ! | TTGGTTATGATTCTTAATCA+TGG | - | chr1_1:64726136-64726155 | Msa0036260:intron | 25.0% |
| ! | GATTCTTAATCATGGTTTAT+TGG | - | chr1_1:64726144-64726163 | Msa0036260:intron | 25.0% |
| !! | TGTCTCTTTCTTTTATAAGT+TGG | - | chr1_1:64726451-64726470 | Msa0036260:CDS | 25.0% |
| !! | GTCTCTTTCTTTTATAAGTT+GGG | - | chr1_1:64726452-64726471 | Msa0036260:CDS | 25.0% |
| !!! | TACTATTTGAAAGCTGTTTT+TGG | - | chr1_1:64720627-64720646 | Msa0036260:CDS | 25.0% |
| ! | ATATCATACAATCATCAGTA+TGG | + | chr1_1:64726755-64726774 | None:intergenic | 25.0% |
| !! | GCTCTCTTCATAATATATTT+TGG | - | chr1_1:64726984-64727003 | Msa0036260:CDS | 25.0% |
| !! | TTATCAATTTTACTTACCCA+AGG | + | chr1_1:64721067-64721086 | None:intergenic | 25.0% |
| !!! | TCATCTAGTTGTTGTTATTT+TGG | - | chr1_1:64727810-64727829 | Msa0036260:intron | 25.0% |
| TTAGAACAAGATGATTGTTG+AGG | + | chr1_1:64719065-64719084 | None:intergenic | 30.0% | |
| TTGAAGGCCATTAATGTAAA+TGG | + | chr1_1:64719090-64719109 | None:intergenic | 30.0% | |
| ATGATGGTACTTCCAATATT+GGG | - | chr1_1:64719217-64719236 | Msa0036260:intron | 30.0% | |
| ATTACCAAAAGGAAATATGG+TGG | + | chr1_1:64719296-64719315 | None:intergenic | 30.0% | |
| TTGCAAATATTGCAAGCAAA+GGG | + | chr1_1:64719584-64719603 | None:intergenic | 30.0% | |
| ! | TCCTCAAAACTACATTTTTG+TGG | - | chr1_1:64720015-64720034 | Msa0036260:CDS | 30.0% |
| !! | ACCACAAAAATGTAGTTTTG+AGG | + | chr1_1:64720019-64720038 | None:intergenic | 30.0% |
| AATTATGGCTTACTTGTTTC+AGG | - | chr1_1:64720122-64720141 | Msa0036260:intron | 30.0% | |
| AGGAAGAATTGCATATAAAC+TGG | + | chr1_1:64720174-64720193 | None:intergenic | 30.0% | |
| GACGAAGATATAAATCTATG+AGG | - | chr1_1:64720268-64720287 | Msa0036260:CDS | 30.0% | |
| TCAGAAAATAATCACACAGA+TGG | + | chr1_1:64720355-64720374 | None:intergenic | 30.0% | |
| !! | TTTTTCAGTCCTACATTAAG+AGG | - | chr1_1:64720431-64720450 | Msa0036260:intron | 30.0% |
| !! | AATTGGTTCAATCTTTTCTC+AGG | - | chr1_1:64720692-64720711 | Msa0036260:CDS | 30.0% |
| ACTTCCAATACTTAATCCAT+TGG | - | chr1_1:64720881-64720900 | Msa0036260:CDS | 30.0% | |
| ATATGCTATTGATGCAAGTA+AGG | + | chr1_1:64720934-64720953 | None:intergenic | 30.0% | |
| GAGAGCTTAGATATGATATT+AGG | + | chr1_1:64720995-64721014 | None:intergenic | 30.0% | |
| !!! | AATATATTTTGGTGTAGGCT+TGG | - | chr1_1:64721020-64721039 | Msa0036260:intron | 30.0% |
| AAAAAGCTTACTGTGAATAC+AGG | + | chr1_1:64721158-64721177 | None:intergenic | 30.0% | |
| TGCACGTGTAAAAAATGTTA+CGG | + | chr1_1:64721450-64721469 | None:intergenic | 30.0% | |
| GATCTCACAATGTAGATATT+TGG | + | chr1_1:64721532-64721551 | None:intergenic | 30.0% | |
| ATTGATTGTAACTACAGAAG+TGG | + | chr1_1:64721623-64721642 | None:intergenic | 30.0% | |
| ACTTCTGTAGTTACAATCAA+TGG | - | chr1_1:64721622-64721641 | Msa0036260:CDS | 30.0% | |
| GAGTAATAAGTAGGTCAAAA+AGG | + | chr1_1:64721739-64721758 | None:intergenic | 30.0% | |
| !! | ATTTTGGAGGAGTAATAAGT+AGG | + | chr1_1:64721748-64721767 | None:intergenic | 30.0% |
| ! | CTACTTGCTTGTATAGATTT+TGG | + | chr1_1:64721764-64721783 | None:intergenic | 30.0% |
| ! | GATACATTGTTAATTTGGTG+AGG | + | chr1_1:64721813-64721832 | None:intergenic | 30.0% |
| TTATGGTGTAACTTGATTGT+AGG | - | chr1_1:64721853-64721872 | Msa0036260:intron | 30.0% | |
| TATGGTGTAACTTGATTGTA+GGG | - | chr1_1:64721854-64721873 | Msa0036260:intron | 30.0% | |
| ! | AAAGCACAAACTTTTATTGC+TGG | - | chr1_1:64721878-64721897 | Msa0036260:intron | 30.0% |
| ! | AAGCACAAACTTTTATTGCT+GGG | - | chr1_1:64721879-64721898 | Msa0036260:intron | 30.0% |
| ! | GTCTAATGAAAAGTTAGCTT+TGG | + | chr1_1:64721969-64721988 | None:intergenic | 30.0% |
| CTAAAACCTTTGCATTCAAA+GGG | + | chr1_1:64722071-64722090 | None:intergenic | 30.0% | |
| GTAGAGTAGATGAAAGAAAA+TGG | + | chr1_1:64722147-64722166 | None:intergenic | 30.0% | |
| AGAAGAGATAAACAACTAGA+GGG | + | chr1_1:64722169-64722188 | None:intergenic | 30.0% | |
| TAGAAGAGATAAACAACTAG+AGG | + | chr1_1:64722170-64722189 | None:intergenic | 30.0% | |
| !!! | ACTTTTTCAGATGATTTCTC+TGG | - | chr1_1:64722207-64722226 | Msa0036260:intron | 30.0% |
| TAATCCTTCAAGTAATGACT+TGG | - | chr1_1:64722255-64722274 | Msa0036260:intron | 30.0% | |
| TTCATACATATAGTTGGGTA+TGG | - | chr1_1:64722423-64722442 | Msa0036260:intron | 30.0% | |
| TCATACATATAGTTGGGTAT+GGG | - | chr1_1:64722424-64722443 | Msa0036260:intron | 30.0% | |
| TTTGACATTTGCCTAAGAAA+AGG | + | chr1_1:64722493-64722512 | None:intergenic | 30.0% | |
| TTATTGTCTCCATGTTTAAG+TGG | + | chr1_1:64722586-64722605 | None:intergenic | 30.0% | |
| CGAATTTGTGATGTGTAAAT+TGG | - | chr1_1:64722622-64722641 | Msa0036260:intron | 30.0% | |
| ! | TGGTGATCTAAAGTTTCATT+TGG | + | chr1_1:64722741-64722760 | None:intergenic | 30.0% |
| !! | CTTAACCATTTGGTTTGTTT+AGG | + | chr1_1:64722876-64722895 | None:intergenic | 30.0% |
| !! | TTTTAGTTATCATTGTTGGG+GGG | + | chr1_1:64722902-64722921 | None:intergenic | 30.0% |
| !! | CTTTTAGTTATCATTGTTGG+GGG | + | chr1_1:64722903-64722922 | None:intergenic | 30.0% |
| !! | GCTTTTAGTTATCATTGTTG+GGG | + | chr1_1:64722904-64722923 | None:intergenic | 30.0% |
| !!! | TTAAGCTTCTCTCTTTTTTG+TGG | + | chr1_1:64722951-64722970 | None:intergenic | 30.0% |
| AAGCCAAATTAAGATAAGAG+TGG | - | chr1_1:64723056-64723075 | Msa0036260:intron | 30.0% | |
| TGTCCACTCTTATCTTAATT+TGG | + | chr1_1:64723062-64723081 | None:intergenic | 30.0% | |
| ! | CTAGTGGATGAAAAATATAC+CGG | + | chr1_1:64723462-64723481 | None:intergenic | 30.0% |
| ! | GGACGAAAAAAATTCTGAAA+AGG | - | chr1_1:64723748-64723767 | Msa0036260:intron | 30.0% |
| ACATAATATATGCAAAGGTC+TGG | - | chr1_1:64723901-64723920 | Msa0036260:intron | 30.0% | |
| CATAATATATGCAAAGGTCT+GGG | - | chr1_1:64723902-64723921 | Msa0036260:intron | 30.0% | |
| ATAATATATGCAAAGGTCTG+GGG | - | chr1_1:64723903-64723922 | Msa0036260:intron | 30.0% | |
| !!! | TTTTTTTTTTGTGGTGTCGA+GGG | + | chr1_1:64723935-64723954 | None:intergenic | 30.0% |
| TACTGAAGAGAAAACTTGTA+AGG | - | chr1_1:64724690-64724709 | Msa0036260:intron | 30.0% | |
| !!! | TTTTTTCCAAATCTTGCTTG+TGG | + | chr1_1:64724794-64724813 | None:intergenic | 30.0% |
| CAAGCAAGATTTGGAAAAAA+AGG | - | chr1_1:64724794-64724813 | Msa0036260:intron | 30.0% | |
| GTGTCAATTTGTGTCAAATT+AGG | - | chr1_1:64724879-64724898 | Msa0036260:intron | 30.0% | |
| TCTTATGATCACTCTAACTT+TGG | - | chr1_1:64724940-64724959 | Msa0036260:intron | 30.0% | |
| TTAATTGTACCTTGTTCAGT+TGG | + | chr1_1:64725068-64725087 | None:intergenic | 30.0% | |
| TCCAAAGCTATTTACATCAA+TGG | - | chr1_1:64725293-64725312 | Msa0036260:intron | 30.0% | |
| TTTCTTTCCTTCTAGATTAC+TGG | - | chr1_1:64725422-64725441 | Msa0036260:intron | 30.0% | |
| GAAAATTCCAGTAATCTAGA+AGG | + | chr1_1:64725432-64725451 | None:intergenic | 30.0% | |
| !! | GATTACTGGAATTTTCAAGA+TGG | - | chr1_1:64725436-64725455 | Msa0036260:intron | 30.0% |
| TGTGTATGTCTTGTAATTTG+AGG | + | chr1_1:64725570-64725589 | None:intergenic | 30.0% | |
| ! | TTTACAATACTTTTCTCCAG+AGG | - | chr1_1:64725682-64725701 | Msa0036260:intron | 30.0% |
| ! | AAACAAATTGTCATTTCCTC+TGG | + | chr1_1:64725701-64725720 | None:intergenic | 30.0% |
| ! | TTTTCGCATATAATCAGTCA+AGG | - | chr1_1:64725799-64725818 | Msa0036260:intron | 30.0% |
| !! | AATCATGGTTTATTGGTTTC+AGG | - | chr1_1:64726151-64726170 | Msa0036260:intron | 30.0% |
| AGGAAGAAATGCATATAAAG+TGG | + | chr1_1:64726203-64726222 | None:intergenic | 30.0% | |
| !! | TTTTATAAGTTGGGAATGAC+CGG | - | chr1_1:64726461-64726480 | Msa0036260:CDS | 30.0% |
| GTTGAGGACTTCAATTAAAT+CGG | + | chr1_1:64726518-64726537 | None:intergenic | 30.0% | |
| !! | AATTGGTTCAATCTTTTCTC+AGG | - | chr1_1:64720692-64720711 | Msa0036260:CDS | 30.0% |
| GAGAGCTTAGATATGAAATT+AGG | + | chr1_1:64726970-64726989 | None:intergenic | 30.0% | |
| !!! | AATATATTTTGGTGTAGGCT+TGG | - | chr1_1:64721020-64721039 | Msa0036260:intron | 30.0% |
| AACTTTCATTATGGAAATGC+AGG | + | chr1_1:64727158-64727177 | None:intergenic | 30.0% | |
| AAAAGGAAAACAAACCTGAT+TGG | + | chr1_1:64727405-64727424 | None:intergenic | 30.0% | |
| TTGTGATGTAACTTCATTGT+AGG | - | chr1_1:64727514-64727533 | Msa0036260:intron | 30.0% | |
| TGTGATGTAACTTCATTGTA+GGG | - | chr1_1:64727515-64727534 | Msa0036260:intron | 30.0% | |
| ! | AAAGCACAAACTTTTATTGC+TGG | - | chr1_1:64721878-64721897 | Msa0036260:intron | 30.0% |
| ! | AAGCACAAACTTTTATTGCT+GGG | - | chr1_1:64721879-64721898 | Msa0036260:intron | 30.0% |
| CTAAAACCTTTGCATTCAAA+GGG | + | chr1_1:64722071-64722090 | None:intergenic | 30.0% | |
| TAACAACAACTAGATGATGT+AGG | + | chr1_1:64727807-64727826 | None:intergenic | 30.0% | |
| GGAAGTAACAAGTGGAATAA+TGG | + | chr1_1:64718969-64718988 | None:intergenic | 35.0% | |
| TACTTCCACTAAGCATTCAT+TGG | - | chr1_1:64718982-64719001 | Msa0036260:CDS | 35.0% | |
| !!! | CTTTTTTCCTTCTAGATTGC+TGG | - | chr1_1:64719184-64719203 | Msa0036260:intron | 35.0% |
| GAAAATTCCAGCAATCTAGA+AGG | + | chr1_1:64719194-64719213 | None:intergenic | 35.0% | |
| !! | TGCTGGAATTTTCAAGATGA+TGG | - | chr1_1:64719201-64719220 | Msa0036260:intron | 35.0% |
| ! | GATGATGGTACTTCCAATAT+TGG | - | chr1_1:64719216-64719235 | Msa0036260:intron | 35.0% |
| GACATAGTAACAAGGAGTAA+AGG | + | chr1_1:64719271-64719290 | None:intergenic | 35.0% | |
| GTTGCAAATATTGCAAGCAA+AGG | + | chr1_1:64719585-64719604 | None:intergenic | 35.0% | |
| CAATATTTGCAACTGTAGAG+TGG | - | chr1_1:64719592-64719611 | Msa0036260:intron | 35.0% | |
| TTCACTGTATTCCTGTTGAT+TGG | - | chr1_1:64719681-64719700 | Msa0036260:intron | 35.0% | |
| TGATATATCTTTCCTCTGTC+AGG | - | chr1_1:64719892-64719911 | Msa0036260:intron | 35.0% | |
| ! | TTTTCTGCTTCACATGTTGT+TGG | - | chr1_1:64719971-64719990 | Msa0036260:intron | 35.0% |
| TTTCTGCTTCACATGTTGTT+GGG | - | chr1_1:64719972-64719991 | Msa0036260:intron | 35.0% | |
| ! | TGTCTCTTTCTTTTATGAGC+TGG | - | chr1_1:64720463-64720482 | Msa0036260:CDS | 35.0% |
| ! | GTCTCTTTCTTTTATGAGCT+GGG | - | chr1_1:64720464-64720483 | Msa0036260:CDS | 35.0% |
| ATTATGAGACTGTCAAGCTA+TGG | + | chr1_1:64720597-64720616 | None:intergenic | 35.0% | |
| ATTCTCAGAACTTCTGATGA+TGG | - | chr1_1:64720665-64720684 | Msa0036260:CDS | 35.0% | |
| ! | CAATCTTTTCTCAGGTACAA+CGG | - | chr1_1:64720700-64720719 | Msa0036260:CDS | 35.0% |
| ATTGCAATCATCAGTATGGA+GGG | + | chr1_1:64720752-64720771 | None:intergenic | 35.0% | |
| ! | AAGCATTGCAATCATCAGTA+TGG | + | chr1_1:64720756-64720775 | None:intergenic | 35.0% |
| GTATTGGAAGTAACACAATC+TGG | + | chr1_1:64720872-64720891 | None:intergenic | 35.0% | |
| !! | CCAACCAATGGATTAAGTAT+TGG | + | chr1_1:64720888-64720907 | None:intergenic | 35.0% |
| CCAATACTTAATCCATTGGT+TGG | - | chr1_1:64720885-64720904 | Msa0036260:CDS | 35.0% | |
| TTGTAACAGTACATGATGCA+AGG | + | chr1_1:64721233-64721252 | None:intergenic | 35.0% | |
| TGAGTTTCATTCACAAATGC+AGG | - | chr1_1:64721328-64721347 | Msa0036260:intron | 35.0% | |
| ! | CCAAATGAGGCACTTAAATA+TGG | + | chr1_1:64721356-64721375 | None:intergenic | 35.0% |
| CCATATTTAAGTGCCTCATT+TGG | - | chr1_1:64721353-64721372 | Msa0036260:intron | 35.0% | |
| GACATAGATAATGCCAAATG+AGG | + | chr1_1:64721369-64721388 | None:intergenic | 35.0% | |
| ATCACATATATACTCACAGC+TGG | + | chr1_1:64721401-64721420 | None:intergenic | 35.0% | |
| ATACAAAAAAAGTGGCATCG+TGG | + | chr1_1:64721488-64721507 | None:intergenic | 35.0% | |
| GTAACTACAGAAGTGGATAA+CGG | + | chr1_1:64721616-64721635 | None:intergenic | 35.0% | |
| TAATTGCAATATCAGGAGAC+AGG | + | chr1_1:64721649-64721668 | None:intergenic | 35.0% | |
| AAAAGGACAACAAACCTGAT+TGG | + | chr1_1:64721722-64721741 | None:intergenic | 35.0% | |
| ! | CTTGCTTGTATAGATTTTGG+AGG | + | chr1_1:64721761-64721780 | None:intergenic | 35.0% |
| ! | AGCACAAACTTTTATTGCTG+GGG | - | chr1_1:64721880-64721899 | Msa0036260:intron | 35.0% |
| GTCAAAGGACTCATTACAAT+TGG | + | chr1_1:64721932-64721951 | None:intergenic | 35.0% | |
| GCTAAAACCTTTGCATTCAA+AGG | + | chr1_1:64722072-64722091 | None:intergenic | 35.0% | |
| TATATGTGCATCTGTATGCA+TGG | - | chr1_1:64722094-64722113 | Msa0036260:intron | 35.0% | |
| AATCAGCTATGATTCAGAAG+CGG | + | chr1_1:64722298-64722317 | None:intergenic | 35.0% | |
| ! | GCAATAGACATTTGAAGCAA+AGG | + | chr1_1:64722384-64722403 | None:intergenic | 35.0% |
| ! | AGAAAAGTGGACCTTTTCTT+AGG | - | chr1_1:64722479-64722498 | Msa0036260:intron | 35.0% |
| ACTACTCAACCACTTAAACA+TGG | - | chr1_1:64722574-64722593 | Msa0036260:intron | 35.0% | |
| !!! | ACTTTTTTGGCTTTTTGCTC+TGG | + | chr1_1:64722794-64722813 | None:intergenic | 35.0% |
| TTTAGTTATCATTGTTGGGG+GGG | + | chr1_1:64722901-64722920 | None:intergenic | 35.0% | |
| !!! | TCTCTCTTTTTTGTGGTAGA+AGG | + | chr1_1:64722944-64722963 | None:intergenic | 35.0% |
| !! | AATTTGGCTTTCGTGCATTT+GGG | + | chr1_1:64723046-64723065 | None:intergenic | 35.0% |
| !! | TAATTTGGCTTTCGTGCATT+TGG | + | chr1_1:64723047-64723066 | None:intergenic | 35.0% |
| TTATAGTTTGGCCAATTAGG+AGG | + | chr1_1:64723102-64723121 | None:intergenic | 35.0% | |
| AAGTGATCAAACAAGTGCAA+TGG | - | chr1_1:64723123-64723142 | Msa0036260:intron | 35.0% | |
| TGTCAAGTAGAACCAAAAAG+AGG | - | chr1_1:64723183-64723202 | Msa0036260:intron | 35.0% | |
| GTCAAGTAGAACCAAAAAGA+GGG | - | chr1_1:64723184-64723203 | Msa0036260:intron | 35.0% | |
| ! | TGTTTATCTTGCCCTCTTTT+TGG | + | chr1_1:64723198-64723217 | None:intergenic | 35.0% |
| CTACAAAGGACAATATGCAT+AGG | + | chr1_1:64723286-64723305 | None:intergenic | 35.0% | |
| CTATGCATATTGTCCTTTGT+AGG | - | chr1_1:64723284-64723303 | Msa0036260:intron | 35.0% | |
| TGTATCTCGTTAAGCCAAAT+AGG | - | chr1_1:64723353-64723372 | Msa0036260:intron | 35.0% | |
| CAAAATTCCTAATTGGAGAC+CGG | - | chr1_1:64723440-64723459 | Msa0036260:intron | 35.0% | |
| AAATATACCGGTCTCCAATT+AGG | + | chr1_1:64723450-64723469 | None:intergenic | 35.0% | |
| ! | CGGTATATTTTTCATCCACT+AGG | - | chr1_1:64723460-64723479 | Msa0036260:intron | 35.0% |
| GCTCTTATAATTAAGGACGA+AGG | - | chr1_1:64723770-64723789 | Msa0036260:intron | 35.0% | |
| CTTATAATTAAGGACGAAGG+TGG | - | chr1_1:64723773-64723792 | Msa0036260:intron | 35.0% | |
| !!! | GTTTTTTTTTTGTGGTGTCG+AGG | + | chr1_1:64723936-64723955 | None:intergenic | 35.0% |
| GGTTAAAATTCACATGGATC+CGG | + | chr1_1:64724069-64724088 | None:intergenic | 35.0% | |
| TTTATTTATCTTGAGGGGTG+CGG | + | chr1_1:64724194-64724213 | None:intergenic | 35.0% | |
| AGTTATCCTCAAGAAATGGA+AGG | - | chr1_1:64724217-64724236 | Msa0036260:intron | 35.0% | |
| GTTATCCTCAAGAAATGGAA+GGG | - | chr1_1:64724218-64724237 | Msa0036260:intron | 35.0% | |
| !! | TTTGGACAGCAGTGTTTTTA+AGG | - | chr1_1:64724327-64724346 | Msa0036260:intron | 35.0% |
| !! | TTGGACAGCAGTGTTTTTAA+GGG | - | chr1_1:64724328-64724347 | Msa0036260:intron | 35.0% |
| ! | GCCAAGCTTTTGTGAAAAAA+TGG | - | chr1_1:64724655-64724674 | Msa0036260:intron | 35.0% |
| !!! | GCCATTTTTTCACAAAAGCT+TGG | + | chr1_1:64724659-64724678 | None:intergenic | 35.0% |
| AAACTGAGCGTGGAAATATT+AGG | - | chr1_1:64724717-64724736 | Msa0036260:intron | 35.0% | |
| AACTGAGCGTGGAAATATTA+GGG | - | chr1_1:64724718-64724737 | Msa0036260:intron | 35.0% | |
| !! | ACACATCAAAGTATTGACGT+CGG | - | chr1_1:64724982-64725001 | Msa0036260:intron | 35.0% |
| AAGTTATGTCCAACTGAACA+AGG | - | chr1_1:64725056-64725075 | Msa0036260:intron | 35.0% | |
| GGAAGTAACAAGTGGAATAA+AGG | + | chr1_1:64718969-64718988 | None:intergenic | 35.0% | |
| TACTTCCACTAAGCATTCAT+TGG | - | chr1_1:64718982-64719001 | Msa0036260:CDS | 35.0% | |
| GCCATTGATGTAAATAGCTT+TGG | + | chr1_1:64725297-64725316 | None:intergenic | 35.0% | |
| !! | AGTGTTGGTTGATTTGATCA+TGG | + | chr1_1:64725345-64725364 | None:intergenic | 35.0% |
| !! | ATGGTGATACTTCCACTTTT+GGG | - | chr1_1:64725455-64725474 | Msa0036260:intron | 35.0% |
| ! | AGGTATTATACTGGTGGATA+TGG | + | chr1_1:64725525-64725544 | None:intergenic | 35.0% |
| ! | TCCACCAGTATAATACCTTT+TGG | - | chr1_1:64725527-64725546 | Msa0036260:intron | 35.0% |
| !! | ACCAAAAGGTATTATACTGG+TGG | + | chr1_1:64725531-64725550 | None:intergenic | 35.0% |
| GTATGTCTTGTAATTTGAGG+AGG | + | chr1_1:64725567-64725586 | None:intergenic | 35.0% | |
| ! | TTGTTGTAGCTTTACTTGCT+TGG | - | chr1_1:64725731-64725750 | Msa0036260:intron | 35.0% |
| ACTTGCTTGGAATCAATCTA+AGG | - | chr1_1:64725744-64725763 | Msa0036260:intron | 35.0% | |
| AAAGAGCAGCAGTATTTAGT+TGG | - | chr1_1:64725962-64725981 | Msa0036260:intron | 35.0% | |
| TTATTGGGAATGTCTTTGCT+CGG | - | chr1_1:64726013-64726032 | Msa0036260:CDS | 35.0% | |
| ! | TCCTCAAAACTGCATTTTTG+TGG | - | chr1_1:64726041-64726060 | Msa0036260:CDS | 35.0% |
| ! | ACCACAAAAATGCAGTTTTG+AGG | + | chr1_1:64726045-64726064 | None:intergenic | 35.0% |
| GACGAAGATACAAATCTATG+AGG | - | chr1_1:64726297-64726316 | Msa0036260:intron | 35.0% | |
| ! | ATTTTCAGTCCTGCATTAAG+AGG | - | chr1_1:64726419-64726438 | Msa0036260:intron | 35.0% |
| TAAATAGTAGTGACACAGCA+AGG | + | chr1_1:64726547-64726566 | None:intergenic | 35.0% | |
| ! | TGAGACTGTCGATTAAACTA+TGG | + | chr1_1:64726591-64726610 | None:intergenic | 35.0% |
| CATACAATCATCAGTATGGA+GGG | + | chr1_1:64726751-64726770 | None:intergenic | 35.0% | |
| TCATACAATCATCAGTATGG+AGG | + | chr1_1:64726752-64726771 | None:intergenic | 35.0% | |
| GTATTGGAAGCAATACAATC+TGG | + | chr1_1:64726847-64726866 | None:intergenic | 35.0% | |
| GCTTCCAATACTTAATCCTT+TGG | - | chr1_1:64726856-64726875 | Msa0036260:intron | 35.0% | |
| CCAACCAAAGGATTAAGTAT+TGG | + | chr1_1:64726863-64726882 | None:intergenic | 35.0% | |
| CCAATACTTAATCCTTTGGT+TGG | - | chr1_1:64726860-64726879 | Msa0036260:intron | 35.0% | |
| AAGGTCATTGTAACAGTACA+TGG | + | chr1_1:64727092-64727111 | None:intergenic | 35.0% | |
| TGAGTTTAATTCACTATGGC+AGG | - | chr1_1:64727180-64727199 | Msa0036260:CDS | 35.0% | |
| ATTAATCTACTACTCACAGC+AGG | + | chr1_1:64727253-64727272 | None:intergenic | 35.0% | |
| ! | AGCACAAACTTTTATTGCTG+GGG | - | chr1_1:64721880-64721899 | Msa0036260:intron | 35.0% |
| GTCAAAGGACTCATAACAAT+TGG | + | chr1_1:64727593-64727612 | None:intergenic | 35.0% | |
| GTATTCTACTCACAAGTCAA+AGG | + | chr1_1:64727608-64727627 | None:intergenic | 35.0% | |
| GCTAAAACCTTTGCATTCAA+AGG | + | chr1_1:64722072-64722091 | None:intergenic | 35.0% | |
| TATATGTGCATCTGTATGCA+TGG | - | chr1_1:64722094-64722113 | Msa0036260:intron | 35.0% | |
| TGCTTAGTGGAAGTAACAAG+TGG | + | chr1_1:64718977-64718996 | None:intergenic | 40.0% | |
| GCAATCCAATGAATGCTTAG+TGG | + | chr1_1:64718990-64719009 | None:intergenic | 40.0% | |
| TTGTTGAGGACATAAAGCAG+TGG | + | chr1_1:64719051-64719070 | None:intergenic | 40.0% | |
| TCTGAAAGCTGACCCAATAT+TGG | + | chr1_1:64719232-64719251 | None:intergenic | 40.0% | |
| ! | TCCACCACCATATTTCCTTT+TGG | - | chr1_1:64719289-64719308 | Msa0036260:intron | 40.0% |
| ACCAAAAGGAAATATGGTGG+TGG | + | chr1_1:64719293-64719312 | None:intergenic | 40.0% | |
| GTAAAGCTACACCAATCAAC+AGG | + | chr1_1:64719695-64719714 | None:intergenic | 40.0% | |
| AACAAAAGGGCAGCAGTATT+TGG | - | chr1_1:64719932-64719951 | Msa0036260:intron | 40.0% | |
| TAAATCTATGAGGAATGCCG+CGG | - | chr1_1:64720278-64720297 | Msa0036260:CDS | 40.0% | |
| CCTGAAGATTACTATTTCCG+CGG | + | chr1_1:64720298-64720317 | None:intergenic | 40.0% | |
| ! | TTTTATGAGCTGGGAATGTC+TGG | - | chr1_1:64720473-64720492 | Msa0036260:CDS | 40.0% |
| ! | TGGTATAACAACCGTTTTGC+TGG | - | chr1_1:64720493-64720512 | Msa0036260:intron | 40.0% |
| !! | TCAGAACTTCTGATGATGGT+CGG | - | chr1_1:64720669-64720688 | Msa0036260:CDS | 40.0% |
| CATTGCAATCATCAGTATGG+AGG | + | chr1_1:64720753-64720772 | None:intergenic | 40.0% | |
| ATCACTTTCTCTCCAACCAA+TGG | + | chr1_1:64720900-64720919 | None:intergenic | 40.0% | |
| !! | TTGGCTTTCTGGATTAGCAT+GGG | - | chr1_1:64721039-64721058 | Msa0036260:intron | 40.0% |
| TTACTGTGAATACAGGACAC+AGG | + | chr1_1:64721151-64721170 | None:intergenic | 40.0% | |
| GTATTGCACTCACAAGTCAA+AGG | + | chr1_1:64721947-64721966 | None:intergenic | 40.0% | |
| CCTTCCAAGTCATTACTTGA+AGG | + | chr1_1:64722262-64722281 | None:intergenic | 40.0% | |
| ! | CCTTCAAGTAATGACTTGGA+AGG | - | chr1_1:64722259-64722278 | Msa0036260:intron | 40.0% |
| ATCAGCTATGATTCAGAAGC+GGG | + | chr1_1:64722297-64722316 | None:intergenic | 40.0% | |
| GCTTCTGAATCATAGCTGAT+TGG | - | chr1_1:64722297-64722316 | Msa0036260:intron | 40.0% | |
| ! | ATAGTTGGGTATGGGTTACA+AGG | - | chr1_1:64722432-64722451 | Msa0036260:intron | 40.0% |
| CGATGCCTAAACAAACCAAA+TGG | - | chr1_1:64722868-64722887 | Msa0036260:intron | 40.0% | |
| TTAGTTATCATTGTTGGGGG+GGG | + | chr1_1:64722900-64722919 | None:intergenic | 40.0% | |
| TTTCGTGCATTTGGGTGTTA+CGG | + | chr1_1:64723038-64723057 | None:intergenic | 40.0% | |
| AAGAGTGGACATCAAACATC+TGG | - | chr1_1:64723071-64723090 | Msa0036260:intron | 40.0% | |
| CTACTGAAATGCCAAACCAA+CGG | - | chr1_1:64723151-64723170 | Msa0036260:intron | 40.0% | |
| TATTGTCCTTTGTAGGAAGC+CGG | - | chr1_1:64723291-64723310 | Msa0036260:intron | 40.0% | |
| ! | CGGTCTCCAATTAGGAATTT+TGG | + | chr1_1:64723442-64723461 | None:intergenic | 40.0% |
| CAGAATTTACGTCACTCCAT+TGG | + | chr1_1:64724294-64724313 | None:intergenic | 40.0% | |
| !! | TGGACAGCAGTGTTTTTAAG+GGG | - | chr1_1:64724329-64724348 | Msa0036260:intron | 40.0% |
| TGTGAAAAAATGGCAGTTCG+AGG | - | chr1_1:64724665-64724684 | Msa0036260:intron | 40.0% | |
| GTGAAAAAATGGCAGTTCGA+GGG | - | chr1_1:64724666-64724685 | Msa0036260:intron | 40.0% | |
| GTAAGGTATAAAACTGAGCG+TGG | - | chr1_1:64724707-64724726 | Msa0036260:intron | 40.0% | |
| GACGTCAATACTTTGATGTG+TGG | + | chr1_1:64724983-64725002 | None:intergenic | 40.0% | |
| GTTGGAAAGGAAGAATACAG+TGG | + | chr1_1:64725025-64725044 | None:intergenic | 40.0% | |
| TGCTTAGTGGAAGTAACAAG+TGG | + | chr1_1:64718977-64718996 | None:intergenic | 40.0% | |
| GCAATCCAATGAATGCTTAG+TGG | + | chr1_1:64718990-64719009 | None:intergenic | 40.0% | |
| TGGAGCAAGATGATTGTTGA+GGG | + | chr1_1:64725277-64725296 | None:intergenic | 40.0% | |
| TTGGAGCAAGATGATTGTTG+AGG | + | chr1_1:64725278-64725297 | None:intergenic | 40.0% | |
| ! | GATGGTGATACTTCCACTTT+TGG | - | chr1_1:64725454-64725473 | Msa0036260:intron | 40.0% |
| GATATGGTAAGAAGGAGTAG+AGG | + | chr1_1:64725509-64725528 | None:intergenic | 40.0% | |
| ! | TACTGGTGGATATGGTAAGA+AGG | + | chr1_1:64725517-64725536 | None:intergenic | 40.0% |
| AAATGTGCGAAGCACATAGT+AGG | + | chr1_1:64725782-64725801 | None:intergenic | 40.0% | |
| ACAACATCTGCCTAAAAGAG+AGG | + | chr1_1:64725931-64725950 | None:intergenic | 40.0% | |
| GCAGTATTTAGTTGGATCAC+TGG | - | chr1_1:64725970-64725989 | Msa0036260:intron | 40.0% | |
| TCTTCTGCTGCACATGTTAT+TGG | - | chr1_1:64725997-64726016 | Msa0036260:CDS | 40.0% | |
| CTTCTGCTGCACATGTTATT+GGG | - | chr1_1:64725998-64726017 | Msa0036260:CDS | 40.0% | |
| CCAGTTTCACAGTTTCAACT+AGG | + | chr1_1:64726223-64726242 | None:intergenic | 40.0% | |
| CCTAGTTGAAACTGTGAAAC+TGG | - | chr1_1:64726220-64726239 | Msa0036260:intron | 40.0% | |
| GAAACTGTGAAACTGGATAC+AGG | - | chr1_1:64726227-64726246 | Msa0036260:CDS | 40.0% | |
| ACAGGAAAGAACCAAGAGTT+AGG | - | chr1_1:64726245-64726264 | Msa0036260:CDS | 40.0% | |
| TAGTACAGAAGCCTAACTCT+TGG | + | chr1_1:64726259-64726278 | None:intergenic | 40.0% | |
| CCTGAAGATTACTATTTCCG+CGG | + | chr1_1:64720298-64720317 | None:intergenic | 40.0% | |
| CACAGCAAGGAAAAAAGTTG+AGG | + | chr1_1:64726534-64726553 | None:intergenic | 40.0% | |
| GTTCTCAGAACTTCTGATGA+TGG | - | chr1_1:64726663-64726682 | Msa0036260:CDS | 40.0% | |
| !! | TCAGAACTTCTGATGATGGT+CGG | - | chr1_1:64720669-64720688 | Msa0036260:CDS | 40.0% |
| TCAGGTATAATGCTTCTCAG+AGG | - | chr1_1:64726708-64726727 | Msa0036260:CDS | 40.0% | |
| ATCACTTTCTCTCCAACCAA+AGG | + | chr1_1:64720900-64720919 | None:intergenic | 40.0% | |
| !! | TTGGCTTTCTGGATTAGCAT+GGG | - | chr1_1:64721039-64721058 | Msa0036260:intron | 40.0% |
| AATGCTCCCTTTGAATGCAA+AGG | - | chr1_1:64727729-64727748 | Msa0036260:intron | 40.0% | |
| GATGATGTAGGAGACAGAAA+TGG | + | chr1_1:64727795-64727814 | None:intergenic | 40.0% | |
| TGCATGCTAAATCCTGATAC+TGG | - | chr1_1:64727924-64727943 | Msa0036260:CDS | 40.0% | |
| TCATCACTTGAACCAGTATC+AGG | + | chr1_1:64727939-64727958 | None:intergenic | 40.0% | |
| ! | TGGTTCAAGTGATGATGACT+TGG | - | chr1_1:64727944-64727963 | Msa0036260:CDS | 40.0% |
| ! | TTCAAGTGATGATGACTTGG+AGG | - | chr1_1:64727947-64727966 | Msa0036260:CDS | 40.0% |
| GGTCAGCTTTCAGATGAACA+TGG | - | chr1_1:64719238-64719257 | Msa0036260:intron | 45.0% | |
| !! | TGGTGGTGGACATAGTAACA+AGG | + | chr1_1:64719279-64719298 | None:intergenic | 45.0% |
| GAGTGGTTGCAACAACTGTA+TGG | - | chr1_1:64719609-64719628 | Msa0036260:intron | 45.0% | |
| TGGTTGCAACAACTGTATGG+TGG | - | chr1_1:64719612-64719631 | Msa0036260:intron | 45.0% | |
| ! | TTGGTGTAGCTTTACTCGCT+TGG | - | chr1_1:64719700-64719719 | Msa0036260:CDS | 45.0% |
| ACTCGCTTGGAATCAATCTG+AGG | - | chr1_1:64719713-64719732 | Msa0036260:CDS | 45.0% | |
| AATTGTGCGAAGCACGTAGT+AGG | + | chr1_1:64719751-64719770 | None:intergenic | 45.0% | |
| AAAGGGCAGCAGTATTTGGT+TGG | - | chr1_1:64719936-64719955 | Msa0036260:intron | 45.0% | |
| GCAGTATTTGGTTGGATCAC+TGG | - | chr1_1:64719944-64719963 | Msa0036260:intron | 45.0% | |
| ACATGTTGTTGGGAACGTCT+TGG | - | chr1_1:64719982-64720001 | Msa0036260:intron | 45.0% | |
| CCTAACTCTCGGTTCTTTGT+GGG | + | chr1_1:64720219-64720238 | None:intergenic | 45.0% | |
| TAGAGCAGAAGCCTAACTCT+CGG | + | chr1_1:64720230-64720249 | None:intergenic | 45.0% | |
| CCGCGGAAATAGTAATCTTC+AGG | - | chr1_1:64720295-64720314 | Msa0036260:intron | 45.0% | |
| CAGTCCTACATTAAGAGGCA+TGG | - | chr1_1:64720436-64720455 | Msa0036260:CDS | 45.0% | |
| AGAGCCATGCCTCTTAATGT+AGG | + | chr1_1:64720443-64720462 | None:intergenic | 45.0% | |
| CACAACAAGGCAAAACGTTG+AGG | + | chr1_1:64720546-64720565 | None:intergenic | 45.0% | |
| !! | CTTCTGATGATGGTCGGAAT+TGG | - | chr1_1:64720675-64720694 | Msa0036260:CDS | 45.0% |
| CATCAGTATGGAGGGATCAA+AGG | + | chr1_1:64720744-64720763 | None:intergenic | 45.0% | |
| !! | CTTGGCTTTCTGGATTAGCA+TGG | - | chr1_1:64721038-64721057 | Msa0036260:intron | 45.0% |
| ! | TACTCACAGCTGGTTTCACA+AGG | + | chr1_1:64721391-64721410 | None:intergenic | 45.0% |
| AGCATCAAGCTCAACCAATC+AGG | - | chr1_1:64721705-64721724 | Msa0036260:CDS | 45.0% | |
| GATGCTCCCTTTGAATGCAA+AGG | - | chr1_1:64722062-64722081 | Msa0036260:intron | 45.0% | |
| ! | TGGGTATGGGTTACAAGGTT+AGG | - | chr1_1:64722437-64722456 | Msa0036260:intron | 45.0% |
| CACACTTCCTCACTAGCAAA+AGG | - | chr1_1:64722764-64722783 | Msa0036260:intron | 45.0% | |
| TAGTTATCATTGTTGGGGGG+GGG | + | chr1_1:64722899-64722918 | None:intergenic | 45.0% | |
| ! | ATCTGGAGCTACCTCCTAAT+TGG | - | chr1_1:64723088-64723107 | Msa0036260:intron | 45.0% |
| TGACAGTGTGTTAGTGGTTG+CGG | + | chr1_1:64723246-64723265 | None:intergenic | 45.0% | |
| ACCACTAACACACTGTCATG+TGG | - | chr1_1:64723248-64723267 | Msa0036260:intron | 45.0% | |
| CCACTAACACACTGTCATGT+GGG | - | chr1_1:64723249-64723268 | Msa0036260:intron | 45.0% | |
| TATAGCATCTGCTCTGTGAC+CGG | + | chr1_1:64723313-64723332 | None:intergenic | 45.0% | |
| CACAGAGCAGATGCTATACA+AGG | - | chr1_1:64723315-64723334 | Msa0036260:intron | 45.0% | |
| GGTCTCATATTTGAGCCTAG+TGG | + | chr1_1:64723478-64723497 | None:intergenic | 45.0% | |
| TACCAACTGAGCTAAGCTCA+CGG | + | chr1_1:64723873-64723892 | None:intergenic | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+AGG | - | chr1_1:64723873-64723892 | Msa0036260:intron | 45.0% |
| ! | ATGAGATCCACGTGATTTGC+CGG | - | chr1_1:64724047-64724066 | Msa0036260:intron | 45.0% |
| TTACGTCACTCCATTGGCAT+GGG | + | chr1_1:64724288-64724307 | None:intergenic | 45.0% | |
| TTTACGTCACTCCATTGGCA+TGG | + | chr1_1:64724289-64724308 | None:intergenic | 45.0% | |
| AAAGAGTGAAAGTCAGCGTG+AGG | - | chr1_1:64724484-64724503 | Msa0036260:intron | 45.0% | |
| CGTTGACCACAAGCAAGATT+TGG | - | chr1_1:64724785-64724804 | Msa0036260:intron | 45.0% | |
| CTCATCTCAGAAACATGTCG+TGG | - | chr1_1:64725132-64725151 | Msa0036260:intron | 45.0% | |
| ATCTCAGAAACATGTCGTGG+TGG | - | chr1_1:64725135-64725154 | Msa0036260:intron | 45.0% | |
| TCTGAAAGCTGACCCAAAAG+TGG | + | chr1_1:64725470-64725489 | None:intergenic | 45.0% | |
| GGTCAGCTTTCAGATGAACA+CGG | - | chr1_1:64719238-64719257 | Msa0036260:intron | 45.0% | |
| CAAATCTATGAGGAATGCCG+CGG | - | chr1_1:64726307-64726326 | Msa0036260:intron | 45.0% | |
| CCGCGGAAATAGTAATCTTC+AGG | - | chr1_1:64720295-64720314 | Msa0036260:intron | 45.0% | |
| CAGCAAAACACTGTGTATGC+CGG | + | chr1_1:64726483-64726502 | None:intergenic | 45.0% | |
| !! | CTTCTGATGATGGTCGGAAT+TGG | - | chr1_1:64720675-64720694 | Msa0036260:CDS | 45.0% |
| CATCAGTATGGAGGGATCAA+AGG | + | chr1_1:64720744-64720763 | None:intergenic | 45.0% | |
| !! | CTTGGCTTTCTGGATTAGCA+TGG | - | chr1_1:64721038-64721057 | Msa0036260:intron | 45.0% |
| CTATGGCAGGTACCATACTT+AGG | - | chr1_1:64727193-64727212 | Msa0036260:CDS | 45.0% | |
| CCAAATGAGCCACCTAAGTA+TGG | + | chr1_1:64727208-64727227 | None:intergenic | 45.0% | |
| CCATACTTAGGTGGCTCATT+TGG | - | chr1_1:64727205-64727224 | Msa0036260:CDS | 45.0% | |
| TACTCACAGCAGGTTTCTCA+AGG | + | chr1_1:64727243-64727262 | None:intergenic | 45.0% | |
| AGCATCAAGCTCAACCAATC+AGG | - | chr1_1:64721705-64721724 | Msa0036260:CDS | 45.0% | |
| GCTGGGGCAAATTCAATATC+TGG | - | chr1_1:64727557-64727576 | Msa0036260:intron | 45.0% | |
| ! | AATTCAGAAGCGGGTCTTGT+TGG | + | chr1_1:64727977-64727996 | None:intergenic | 45.0% |
| !! | AAAAAGATTTATAATAAATA+AGG | - | chr1_1:64723667-64723686 | Msa0036260:intron | 5.0% |
| !! | AAAAGATTTATAATAAATAA+GGG | - | chr1_1:64723668-64723687 | Msa0036260:intron | 5.0% |
| !!! | AAAAAAAAACAATTTTTTTA+AGG | - | chr1_1:64724438-64724457 | Msa0036260:intron | 5.0% |
| TGACAACATCTGCCTGACAG+AGG | + | chr1_1:64719907-64719926 | None:intergenic | 50.0% | |
| CCCACAAAGAACCGAGAGTT+AGG | - | chr1_1:64720216-64720235 | Msa0036260:intron | 50.0% | |
| GCCTAACTCTCGGTTCTTTG+TGG | + | chr1_1:64720220-64720239 | None:intergenic | 50.0% | |
| ! | TTGGTGTAGGCTTGGCTTTC+TGG | - | chr1_1:64721028-64721047 | Msa0036260:intron | 50.0% |
| !! | TGGATTAGCATGGGCACCTT+GGG | - | chr1_1:64721048-64721067 | Msa0036260:intron | 50.0% |
| ! | GCTAGTGAGGAAGTGTGTGT+TGG | + | chr1_1:64722761-64722780 | None:intergenic | 50.0% |
| ! | TGGCACTCCTTTTGCTAGTG+AGG | + | chr1_1:64722774-64722793 | None:intergenic | 50.0% |
| ! | CATCACTTACGCCGTTGGTT+TGG | + | chr1_1:64723165-64723184 | None:intergenic | 50.0% |
| CTTGACATCACTTACGCCGT+TGG | + | chr1_1:64723170-64723189 | None:intergenic | 50.0% | |
| CCCACATGACAGTGTGTTAG+TGG | + | chr1_1:64723252-64723271 | None:intergenic | 50.0% | |
| ACCAACTGAGCTAAGCTCAC+GGG | + | chr1_1:64723872-64723891 | None:intergenic | 50.0% | |
| GATCGCCCTTCCATTTCTTG+AGG | + | chr1_1:64724226-64724245 | None:intergenic | 50.0% | |
| GGGACATGGCATACATGGAT+CGG | + | chr1_1:64724268-64724287 | None:intergenic | 50.0% | |
| TATGCCATGTCCCATGCCAA+TGG | - | chr1_1:64724275-64724294 | Msa0036260:intron | 50.0% | |
| ! | AGAAACATGTCGTGGTGGAG+TGG | - | chr1_1:64725140-64725159 | Msa0036260:intron | 50.0% |
| ! | GGAGTGGATTCTTTGAGCTG+AGG | - | chr1_1:64718943-64718962 | Msa0036260:CDS | 50.0% |
| CTGCATTTCTGTCGCGTATG+TGG | - | chr1_1:64725831-64725850 | Msa0036260:intron | 50.0% | |
| TTTCTGTCGCGTATGTGGTG+AGG | - | chr1_1:64725836-64725855 | Msa0036260:intron | 50.0% | |
| ! | CGGCATACACAGTGTTTTGC+TGG | - | chr1_1:64726481-64726500 | Msa0036260:intron | 50.0% |
| ! | TTGGTGTAGGCTTGGCTTTC+TGG | - | chr1_1:64721028-64721047 | Msa0036260:intron | 50.0% |
| !! | TGGATTAGCATGGGCACCTT+GGG | - | chr1_1:64721048-64721067 | Msa0036260:intron | 50.0% |
| TGGCAGGTACCATACTTAGG+TGG | - | chr1_1:64727196-64727215 | Msa0036260:CDS | 50.0% | |
| CTGCATCTCTGTCGCGTATG+TGG | - | chr1_1:64719800-64719819 | Msa0036260:intron | 55.0% | |
| !! | CTGGATTAGCATGGGCACCT+TGG | - | chr1_1:64721047-64721066 | Msa0036260:intron | 55.0% |
| TGTTAGTGGTTGCGGCATGG+AGG | + | chr1_1:64723238-64723257 | None:intergenic | 55.0% | |
| GTGTGTTAGTGGTTGCGGCA+TGG | + | chr1_1:64723241-64723260 | None:intergenic | 55.0% | |
| ! | CTGTGACCGGCTTCCTACAA+AGG | + | chr1_1:64723300-64723319 | None:intergenic | 55.0% |
| CCAACTGAGCTAAGCTCACG+GGG | + | chr1_1:64723871-64723890 | None:intergenic | 55.0% | |
| CATGGATCCGGCAAATCACG+TGG | + | chr1_1:64724057-64724076 | None:intergenic | 55.0% | |
| GGCATGGGACATGGCATACA+TGG | + | chr1_1:64724273-64724292 | None:intergenic | 55.0% | |
| CACTCCATTGGCATGGGACA+TGG | + | chr1_1:64724282-64724301 | None:intergenic | 55.0% | |
| TCCGAGGAGTTGCGATTGTG+TGG | - | chr1_1:64724563-64724582 | Msa0036260:intron | 55.0% | |
| CCCACACAATCGCAACTCCT+CGG | + | chr1_1:64724567-64724586 | None:intergenic | 55.0% | |
| CCGAGGAGTTGCGATTGTGT+GGG | - | chr1_1:64724564-64724583 | Msa0036260:intron | 55.0% | |
| CAGTCCTGCATTAAGAGGCG+TGG | - | chr1_1:64726424-64726443 | Msa0036260:CDS | 55.0% | |
| AGAGCCACGCCTCTTAATGC+AGG | + | chr1_1:64726431-64726450 | None:intergenic | 55.0% | |
| !! | CTGGATTAGCATGGGCACCT+TGG | - | chr1_1:64721047-64721066 | Msa0036260:intron | 55.0% |
| TGGGGGGGGGCTTAACCATT+TGG | + | chr1_1:64722886-64722905 | None:intergenic | 60.0% | |
| TGGTTGCGGCATGGAGGAAG+CGG | + | chr1_1:64723232-64723251 | None:intergenic | 60.0% | |
| CCCCGTGAGCTTAGCTCAGT+TGG | - | chr1_1:64723868-64723887 | Msa0036260:intron | 60.0% | |
| GCAAGAGCGAGTGTAGCACG+TGG | - | chr1_1:64724506-64724525 | Msa0036260:intron | 60.0% | |
| CCTGGCTGCGTACCTGTTTG+CGG | - | chr1_1:64724604-64724623 | Msa0036260:intron | 60.0% | |
| CTGGCTGCGTACCTGTTTGC+GGG | - | chr1_1:64724605-64724624 | Msa0036260:intron | 60.0% | |
| TGGCTGCGTACCTGTTTGCG+GGG | - | chr1_1:64724606-64724625 | Msa0036260:intron | 60.0% | |
| CTTGGCTTACACTCCGCGCA+CGG | + | chr1_1:64724641-64724660 | None:intergenic | 60.0% | |
| TTGCGGCATGGAGGAAGCGG+TGG | + | chr1_1:64723229-64723248 | None:intergenic | 65.0% | |
| CCGCAAACAGGTACGCAGCC+AGG | + | chr1_1:64724607-64724626 | None:intergenic | 65.0% | |
| GTACCTGTTTGCGGGGCGCA+TGG | - | chr1_1:64724613-64724632 | Msa0036260:intron | 65.0% | |
| !! | GCCAGGCGCATGGTGCTGCA+CGG | + | chr1_1:64724590-64724609 | None:intergenic | 70.0% |
| CAGGTACGCAGCCAGGCGCA+TGG | + | chr1_1:64724600-64724619 | None:intergenic | 70.0% | |
| GTGCCATGCGCCCCGCAAAC+AGG | + | chr1_1:64724619-64724638 | None:intergenic | 70.0% | |
| GCCGTGCAGCACCATGCGCC+TGG | - | chr1_1:64724586-64724605 | Msa0036260:intron | 75.0% | |
| ! | GGGGCGCATGGCACCGTGCG+CGG | - | chr1_1:64724625-64724644 | Msa0036260:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 64718933 | 64728004 | 64718933 | ID=Msa0036260;Name=Msa0036260 |
| chr1_1 | mRNA | 64718933 | 64728004 | 64718933 | ID=Msa0036260-mRNA-1;Parent=Msa0036260;Name=Msa0036260-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.36|0.23|1|0.88|0.84|26|0|813 |
| chr1_1 | exon | 64727822 | 64728004 | 64727822 | ID=Msa0036260-mRNA-1:exon:20816;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64727627 | 64727738 | 64727627 | ID=Msa0036260-mRNA-1:exon:20815;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64727116 | 64727228 | 64727116 | ID=Msa0036260-mRNA-1:exon:20814;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64726901 | 64727023 | 64726901 | ID=Msa0036260-mRNA-1:exon:20813;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64726621 | 64726793 | 64726621 | ID=Msa0036260-mRNA-1:exon:20812;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64726423 | 64726498 | 64726423 | ID=Msa0036260-mRNA-1:exon:20811;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64726224 | 64726310 | 64726224 | ID=Msa0036260-mRNA-1:exon:20810;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64725984 | 64726064 | 64725984 | ID=Msa0036260-mRNA-1:exon:20809;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64725868 | 64725900 | 64725868 | ID=Msa0036260-mRNA-1:exon:20808;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64725534 | 64725587 | 64725534 | ID=Msa0036260-mRNA-1:exon:20807;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64725211 | 64725252 | 64725211 | ID=Msa0036260-mRNA-1:exon:20806;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64725003 | 64725062 | 64725003 | ID=Msa0036260-mRNA-1:exon:20805;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64724831 | 64724892 | 64724831 | ID=Msa0036260-mRNA-1:exon:20804;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64721609 | 64721795 | 64721609 | ID=Msa0036260-mRNA-1:exon:20803;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64721389 | 64721500 | 64721389 | ID=Msa0036260-mRNA-1:exon:20802;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64721085 | 64721197 | 64721085 | ID=Msa0036260-mRNA-1:exon:20801;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64720875 | 64720997 | 64720875 | ID=Msa0036260-mRNA-1:exon:20800;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64720592 | 64720764 | 64720592 | ID=Msa0036260-mRNA-1:exon:20799;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64720435 | 64720510 | 64720435 | ID=Msa0036260-mRNA-1:exon:20798;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64720226 | 64720312 | 64720226 | ID=Msa0036260-mRNA-1:exon:20797;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64720009 | 64720089 | 64720009 | ID=Msa0036260-mRNA-1:exon:20796;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64719893 | 64719925 | 64719893 | ID=Msa0036260-mRNA-1:exon:20795;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64719682 | 64719735 | 64719682 | ID=Msa0036260-mRNA-1:exon:20794;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64719528 | 64719569 | 64719528 | ID=Msa0036260-mRNA-1:exon:20793;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64719342 | 64719401 | 64719342 | ID=Msa0036260-mRNA-1:exon:20792;Parent=Msa0036260-mRNA-1 |
| chr1_1 | exon | 64718933 | 64719034 | 64718933 | ID=Msa0036260-mRNA-1:exon:20791;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64727822 | 64728004 | 64727822 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64727627 | 64727738 | 64727627 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64727116 | 64727228 | 64727116 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64726901 | 64727023 | 64726901 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64726621 | 64726793 | 64726621 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64726423 | 64726498 | 64726423 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64726224 | 64726310 | 64726224 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64725984 | 64726064 | 64725984 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64725868 | 64725900 | 64725868 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64725534 | 64725587 | 64725534 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64725211 | 64725252 | 64725211 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64725003 | 64725062 | 64725003 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64724831 | 64724892 | 64724831 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64721609 | 64721795 | 64721609 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64721389 | 64721500 | 64721389 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64721085 | 64721197 | 64721085 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64720875 | 64720997 | 64720875 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64720592 | 64720764 | 64720592 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64720435 | 64720510 | 64720435 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64720226 | 64720312 | 64720226 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64720009 | 64720089 | 64720009 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64719893 | 64719925 | 64719893 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64719682 | 64719735 | 64719682 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64719528 | 64719569 | 64719528 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64719342 | 64719401 | 64719342 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| chr1_1 | CDS | 64718933 | 64719034 | 64718933 | ID=Msa0036260-mRNA-1:cds;Parent=Msa0036260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
