AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1031060


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1031060 MtrunA17_Chr7g0252501 84.768 151 23 0 1 151 80 230 7.03e-94 271
Msa1031060 MtrunA17_Chr7g0252361 75.658 152 36 1 1 151 214 365 1.54e-78 236
Msa1031060 MtrunA17_Chr3g0107871 76.159 151 31 2 1 149 193 340 4.03e-77 232
Msa1031060 MtrunA17_Chr7g0252351 95.000 60 3 0 92 151 1 60 1.16e-36 120
Msa1031060 MtrunA17_Chr3g0144871 45.752 153 76 3 2 149 217 367 3.02e-36 128
Msa1031060 MtrunA17_Chr6g0455081 47.581 124 60 2 30 150 9 130 1.52e-33 114
Msa1031060 MtrunA17_Chr4g0008111 35.714 154 86 3 2 149 211 357 1.69e-26 102
Msa1031060 MtrunA17_Chr1g0155451 37.419 155 88 2 2 150 65 216 3.12e-26 98.6
Msa1031060 MtrunA17_Chr8g0372821 35.185 162 91 4 2 151 211 370 7.56e-26 100
Msa1031060 MtrunA17_Chr3g0107591 33.333 162 94 3 2 151 210 369 1.23e-25 100
Msa1031060 MtrunA17_Chr6g0475221 37.013 154 89 3 1 151 206 354 9.22e-25 97.4
Msa1031060 MtrunA17_Chr8g0372671 32.903 155 94 2 1 149 210 360 4.82e-24 95.5
Msa1031060 MtrunA17_Chr5g0404631 34.810 158 93 3 2 149 222 379 7.16e-24 95.5
Msa1031060 MtrunA17_Chr1g0155471 40.984 122 64 2 31 150 9 124 8.90e-24 89.7
Msa1031060 MtrunA17_Chr6g0475241 33.121 157 89 4 1 151 211 357 1.21e-22 91.7
Msa1031060 MtrunA17_Chr8g0343971 30.968 155 93 3 2 149 211 358 3.08e-18 79.7
Msa1031060 MtrunA17_Chr8g0343981 30.128 156 92 3 1 149 210 355 9.78e-17 75.5
Msa1031060 MtrunA17_Chr3g0099271 31.034 145 83 3 2 134 57 196 1.63e-15 70.5
Msa1031060 MtrunA17_Chr5g0444921 30.818 159 91 4 2 148 238 389 1.70e-15 72.4
Msa1031060 MtrunA17_Chr3g0100101 31.298 131 77 2 2 124 229 354 1.34e-14 69.7
Msa1031060 MtrunA17_Chr5g0419851 29.221 154 93 2 2 149 277 420 2.02e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1031060 AT1G19640.1 34.591 159 93 3 2 149 229 387 1.35e-26 103
Msa1031060 AT3G11480.1 35.484 155 86 2 2 149 231 378 1.35e-21 89.4
Msa1031060 AT5G04370.1 36.774 155 86 4 2 149 240 389 9.79e-21 87.4
Msa1031060 AT5G04370.3 36.774 155 86 4 2 149 245 394 1.00e-20 87.4
Msa1031060 AT5G04370.2 36.774 155 86 4 2 149 259 408 1.01e-20 87.4
Msa1031060 AT5G66430.1 37.410 139 76 3 2 131 199 335 4.12e-20 85.1
Msa1031060 AT5G38020.2 36.986 146 73 5 2 131 167 309 1.31e-19 83.6
Msa1031060 AT5G38020.1 36.986 146 73 5 2 131 206 348 1.92e-19 83.6
Msa1031060 AT3G21950.1 36.364 143 78 4 2 131 206 348 7.99e-16 73.6
Msa1031060 AT4G36470.1 27.742 155 99 2 2 150 223 370 3.91e-15 71.6
Msa1031060 AT5G04380.2 31.387 137 85 2 2 131 165 299 5.97e-15 70.9
Msa1031060 AT5G04380.3 31.387 137 85 2 2 131 236 370 8.97e-15 70.5
Msa1031060 AT2G14060.1 28.667 150 82 3 2 135 214 354 1.55e-14 69.7
Msa1031060 AT5G55250.2 31.298 131 77 2 2 124 195 320 4.86e-13 65.5
Msa1031060 AT5G55250.1 31.298 131 77 2 2 124 233 358 5.55e-13 65.5
Msa1031060 AT1G15125.1 31.356 118 70 2 9 126 215 321 4.25e-12 62.8
Msa1031060 AT5G38100.3 32.143 112 62 2 20 130 216 314 1.93e-11 60.8
Msa1031060 AT5G38100.1 31.858 113 63 2 19 130 238 337 2.03e-11 60.8
Msa1031060 AT1G68040.1 32.576 132 72 5 20 146 238 357 2.61e-11 60.5
Msa1031060 AT3G21950.2 36.697 109 62 3 30 131 272 380 4.00e-11 60.1

Find 73 sgRNAs with CRISPR-Local

Find 521 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCATCTTACCATATTTA+AGG 0.065821 7_1:-65409226 None:intergenic
CATTCTTGGCCAAACCTTTC+GGG 0.134603 7_1:-65403872 None:intergenic
TGTAACCAACAAATAATTTA+AGG 0.184547 7_1:-65409390 None:intergenic
GTTCTCAAGGTTTGCAAATC+TGG 0.189499 7_1:+65409138 Msa1031060:CDS
CATATTAATGATATTCTTCT+TGG 0.199533 7_1:-65409260 None:intergenic
GTTTAGTGGTTCTCCATTCT+TGG 0.202312 7_1:-65403886 None:intergenic
CCATTCTTGGCCAAACCTTT+CGG 0.227156 7_1:-65403873 None:intergenic
TTTGGTTGAAGAAGCAAAAT+TGG 0.233886 7_1:+65408868 Msa1031060:CDS
ATTATTTGTTGGTTACATTT+TGG 0.234873 7_1:+65409396 Msa1031060:three_prime_UTR
GTTATTTGTTTGTTACATTT+TGG 0.250389 7_1:+65409336 Msa1031060:three_prime_UTR
TTACCATATTTAAGGATTCT+TGG 0.269472 7_1:-65409218 None:intergenic
ATTGTAACGTTAATAACTTA+TGG 0.280843 7_1:-65409361 None:intergenic
ATTGTAACGTTAATAACTTA+TGG 0.283326 7_1:-65409421 None:intergenic
GAATAAAATTTAGAATAAAA+TGG 0.295988 7_1:+65409282 Msa1031060:three_prime_UTR
AATCAACAATATCTTCTTGT+AGG 0.299467 7_1:-65409009 None:intergenic
TGACCAAGAATCCTTAAATA+TGG 0.324046 7_1:+65409215 Msa1031060:exon
TTGTAACGTTAATAACTTAT+GGG 0.344267 7_1:-65409360 None:intergenic
TTGTAACGTTAATAACTTAT+GGG 0.344267 7_1:-65409420 None:intergenic
CCTTTATGTTATTAGAGTTA+AGG 0.349929 7_1:+65409512 Msa1031060:three_prime_UTR
AAGTTATTAACGTTACAATT+TGG 0.356198 7_1:+65409425 Msa1031060:three_prime_UTR
TAAATATTTCCCTTGTTTAG+TGG 0.357448 7_1:-65403900 None:intergenic
CTTTATGTTATTAGAGTTAA+GGG 0.371408 7_1:+65409513 Msa1031060:three_prime_UTR
TGTTTCACTTCCTCTATAGT+AGG 0.377591 7_1:-65408917 None:intergenic
TGTAACAAACAAATAACTTA+AGG 0.379096 7_1:-65409330 None:intergenic
CCTTAACTCTAATAACATAA+AGG 0.404110 7_1:-65409512 None:intergenic
CATTTAGGCCCCGAAAGGTT+TGG 0.417248 7_1:+65403863 None:intergenic
TTAAAATATGCTTCATAGAC+TGG 0.421359 7_1:-65403945 None:intergenic
TAGTCCCTTAAATTATTTGT+TGG 0.439030 7_1:+65409385 Msa1031060:three_prime_UTR
TCTTCCTCCGTCAACCAATC+TGG 0.460750 7_1:+65409488 Msa1031060:three_prime_UTR
CCGAAAGGTTTGGCCAAGAA+TGG 0.461973 7_1:+65403873 Msa1031060:five_prime_UTR
GTAACAAACAAATAACTTAA+GGG 0.464278 7_1:-65409329 None:intergenic
TTCGAGGAATTAACAACTGA+TGG 0.468183 7_1:+65404008 Msa1031060:five_prime_UTR
ATGATGGCATTAACATTTGT+TGG 0.472815 7_1:+65404032 Msa1031060:CDS
ATAAACAGCCCTGTGATACT+TGG 0.473009 7_1:-65409068 None:intergenic
GTAACCAACAAATAATTTAA+GGG 0.476191 7_1:-65409389 None:intergenic
TCTATAGTAGGATGATATAC+AGG 0.482913 7_1:-65408905 None:intergenic
AAAAGTCTTCAATGTTTGAA+GGG 0.485869 7_1:-65408966 None:intergenic
TGTATATCATCCTACTATAG+AGG 0.486196 7_1:+65408907 Msa1031060:CDS
AATTCATAGCCAAGTATCAC+AGG 0.487711 7_1:+65409059 Msa1031060:CDS
TAAAAGTCTTCAATGTTTGA+AGG 0.490410 7_1:-65408967 None:intergenic
TCATGGATGAATTGTTCTCA+AGG 0.497534 7_1:+65409125 Msa1031060:CDS
AATTTAGAATAAAATGGTAA+AGG 0.516525 7_1:+65409288 Msa1031060:three_prime_UTR
ATTAACAACTGATGGGATGA+TGG 0.518595 7_1:+65404016 Msa1031060:exon
AATAACATAAAGGACCAGAT+TGG 0.527815 7_1:-65409502 None:intergenic
TTCTCAAGGGGTAATTGCCA+TGG 0.534080 7_1:+65404076 Msa1031060:CDS
TATGCTTCATAGACTGGTGG+AGG 0.535027 7_1:-65403939 None:intergenic
CCAAACCCGGCTATGAAAAG+AGG 0.536351 7_1:-65409094 None:intergenic
TTGTCGATAGCAAAATGAGA+GGG 0.543353 7_1:+65409035 Msa1031060:CDS
GGTTGACGGAGGAAGAGTTA+AGG 0.546741 7_1:-65409481 None:intergenic
ATTCTTGGCCAAACCTTTCG+GGG 0.560520 7_1:-65403871 None:intergenic
GGAAGTGAAACAAGTGATTG+AGG 0.563062 7_1:+65408928 Msa1031060:CDS
CCTTAAATATGGTAAGATGA+AGG 0.563859 7_1:+65409226 Msa1031060:exon
ACTCATTGAGATAGAGACAT+TGG 0.576407 7_1:+65409168 Msa1031060:CDS
AACTACCACTTCTTCTCAAG+GGG 0.577750 7_1:+65404064 Msa1031060:CDS
TGCCATGGTACTCAATGAGA+TGG 0.578688 7_1:+65404091 Msa1031060:CDS
ACAACTACCACTTCTTCTCA+AGG 0.579517 7_1:+65404062 Msa1031060:CDS
CAACTACCACTTCTTCTCAA+GGG 0.581594 7_1:+65404063 Msa1031060:CDS
TCGAGGAATTAACAACTGAT+GGG 0.582747 7_1:+65404009 Msa1031060:five_prime_UTR
GAATGGAGAACCACTAAACA+AGG 0.590677 7_1:+65403890 Msa1031060:five_prime_UTR
AATTACCCCTTGAGAAGAAG+TGG 0.590678 7_1:-65404069 None:intergenic
AAATATGCTTCATAGACTGG+TGG 0.602942 7_1:-65403942 None:intergenic
TAAAGGACCAGATTGGTTGA+CGG 0.603034 7_1:-65409495 None:intergenic
TGTGACATTTAGGCCCCGAA+AGG 0.611420 7_1:+65403858 None:intergenic
AAACAAGTGATTGAGGCAGA+AGG 0.616874 7_1:+65408935 Msa1031060:CDS
CGGGTTTGGAGAAAACATCA+TGG 0.634728 7_1:+65409108 Msa1031060:CDS
GTTGTCGATAGCAAAATGAG+AGG 0.657254 7_1:+65409034 Msa1031060:CDS
ATGCTTCATAGACTGGTGGA+GGG 0.673189 7_1:-65403938 None:intergenic
GACCATCTCATTGAGTACCA+TGG 0.681630 7_1:-65404093 None:intergenic
ACTCAATGAGATGGTCCAAG+AGG 0.686877 7_1:+65404100 Msa1031060:CDS
AATGGAGAACCACTAAACAA+GGG 0.694091 7_1:+65403891 Msa1031060:five_prime_UTR
AGGACCAGATTGGTTGACGG+AGG 0.698152 7_1:-65409492 None:intergenic
TGTCGATAGCAAAATGAGAG+GGG 0.698320 7_1:+65409036 Msa1031060:CDS
ATTCATAGCCAAGTATCACA+GGG 0.701859 7_1:+65409060 Msa1031060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCAAAATAAAAATCTTAAA+CGG + chr7_1:65404177-65404196 Msa1031060:intron 10.0%
!!! TTTTTTTTTTTCCTTTTTAA+GGG - chr7_1:65406748-65406767 None:intergenic 10.0%
!!! TAAGTAAATTTTTTTTTGTA+GGG - chr7_1:65406876-65406895 None:intergenic 10.0%
!!! ATAAGTAAATTTTTTTTTGT+AGG - chr7_1:65406877-65406896 None:intergenic 10.0%
!! TTAAAAAATTTAAGAGTTTA+AGG - chr7_1:65406938-65406957 None:intergenic 10.0%
!! AGATAAAAAGTAATAAAATT+TGG + chr7_1:65407639-65407658 Msa1031060:intron 10.0%
!! AAATGTTATTAAAATTAAGT+AGG + chr7_1:65407825-65407844 Msa1031060:intron 10.0%
!! AATGTTATTAAAATTAAGTA+GGG + chr7_1:65407826-65407845 Msa1031060:intron 10.0%
!! TATTATAGTCATTATAAAAA+GGG - chr7_1:65407900-65407919 None:intergenic 10.0%
!! TTATTATAGTCATTATAAAA+AGG - chr7_1:65407901-65407920 None:intergenic 10.0%
!!! ACTTTCTTTTTTTTTTTTTT+TGG + chr7_1:65408409-65408428 Msa1031060:intron 10.0%
!!! TTTTTATCTTTATTTTCATA+GGG - chr7_1:65408475-65408494 None:intergenic 10.0%
!!! TTTTTTATCTTTATTTTCAT+AGG - chr7_1:65408476-65408495 None:intergenic 10.0%
!!! GAATAAAATTTAGAATAAAA+TGG + chr7_1:65409282-65409301 Msa1031060:three_prime_UTR 10.0%
!!! AATAAATAAGGGTATATTAA+TGG + chr7_1:65406328-65406347 Msa1031060:intron 15.0%
!! AAAAATAATAAATGTTGCAT+TGG + chr7_1:65406353-65406372 Msa1031060:intron 15.0%
!!! ATTTTGAGAAAAAGAAAAAA+TGG + chr7_1:65406394-65406413 Msa1031060:intron 15.0%
!! TAAAATAAATATGGATATGT+TGG + chr7_1:65406450-65406469 Msa1031060:intron 15.0%
!! ACTAAAAATGTCTTATATTT+AGG + chr7_1:65406537-65406556 Msa1031060:intron 15.0%
!! CTAAAAATGTCTTATATTTA+GGG + chr7_1:65406538-65406557 Msa1031060:intron 15.0%
!! ATTATAGTAAACTTTATATC+GGG - chr7_1:65406697-65406716 None:intergenic 15.0%
!! CATTATAGTAAACTTTATAT+CGG - chr7_1:65406698-65406717 None:intergenic 15.0%
!!! TTTTTTTTTTCCTTTTTAAG+GGG - chr7_1:65406747-65406766 None:intergenic 15.0%
!!! GTTTTTTTTTTTCCTTTTTA+AGG - chr7_1:65406749-65406768 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - chr7_1:65407260-65407279 None:intergenic 15.0%
!!! AAACAAAATTTATTTTAGCA+GGG - chr7_1:65406909-65406928 None:intergenic 15.0%
!!! TAAACAAAATTTATTTTAGC+AGG - chr7_1:65406910-65406929 None:intergenic 15.0%
!! AGATATAAGTAACAAAAATA+TGG + chr7_1:65407069-65407088 Msa1031060:intron 15.0%
!!! AATTTTTGCGATATTTTTTT+CGG + chr7_1:65407104-65407123 Msa1031060:intron 15.0%
!! AAGCATAAATTAAACAAATT+TGG + chr7_1:65407188-65407207 Msa1031060:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG + chr7_1:65407260-65407279 Msa1031060:intron 15.0%
!!! AATAACTATCCTTTTTTATA+AGG + chr7_1:65407342-65407361 Msa1031060:intron 15.0%
!!! ATAACTATCCTTTTTTATAA+GGG + chr7_1:65407343-65407362 Msa1031060:intron 15.0%
!! ATAATTAACCCTTATAAAAA+AGG - chr7_1:65407354-65407373 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+GGG - chr7_1:65407260-65407279 None:intergenic 15.0%
!! AAATGCTATTAAAATTAAGT+AGG - chr7_1:65407259-65407278 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG - chr7_1:65407734-65407753 None:intergenic 15.0%
!!! AAATTTTGCGATAATTTTTT+GGG + chr7_1:65407673-65407692 Msa1031060:intron 15.0%
!!! TGTTTTGATTTTCAATATAT+AGG + chr7_1:65408359-65408378 Msa1031060:intron 15.0%
!!! GTTTTGATTTTCAATATATA+GGG + chr7_1:65408360-65408379 Msa1031060:intron 15.0%
!!! TCAACATATTACATTTTTTT+TGG + chr7_1:65408743-65408762 Msa1031060:intron 15.0%
!! TAGATAAAAAAAATAAACCT+TGG + chr7_1:65408794-65408813 Msa1031060:intron 15.0%
!!! AATTTAGAATAAAATGGTAA+AGG + chr7_1:65409288-65409307 Msa1031060:three_prime_UTR 15.0%
!! AGATTTCTATCAATATTTGT+AGG + chr7_1:65404204-65404223 Msa1031060:intron 20.0%
!! GATTTCTATCAATATTTGTA+GGG + chr7_1:65404205-65404224 Msa1031060:intron 20.0%
!! TGGATGAAATTCAATAAATA+AGG + chr7_1:65406316-65406335 Msa1031060:intron 20.0%
!! GGATGAAATTCAATAAATAA+GGG + chr7_1:65406317-65406336 Msa1031060:intron 20.0%
!! CGATATAAAGTTTACTATAA+TGG + chr7_1:65406696-65406715 Msa1031060:intron 20.0%
!!! GTTTTTCAACAATTTTTTAC+AGG - chr7_1:65407158-65407177 None:intergenic 20.0%
!!! CAAATTTTGCGATAATTTTT+TGG + chr7_1:65407672-65407691 Msa1031060:intron 20.0%
!! TAAACAAATTTGAATTGAGT+AGG + chr7_1:65407763-65407782 Msa1031060:intron 20.0%
!! AAACAAATTTGAATTGAGTA+GGG + chr7_1:65407764-65407783 Msa1031060:intron 20.0%
!! TAACTTCTGTCATTATATTT+AGG + chr7_1:65407918-65407937 Msa1031060:intron 20.0%
!! AACTTCTGTCATTATATTTA+GGG + chr7_1:65407919-65407938 Msa1031060:intron 20.0%
!!! AATTAATATGTTGCACATTT+TGG - chr7_1:65408326-65408345 None:intergenic 20.0%
!!! TGAAACCCATTTATTTTTAT+GGG + chr7_1:65408547-65408566 Msa1031060:intron 20.0%
!! GAAAACCCATAAAAATAAAT+GGG - chr7_1:65408555-65408574 None:intergenic 20.0%
!! AAAATCTGGGAATATAATTA+GGG - chr7_1:65408678-65408697 None:intergenic 20.0%
!!! ACATATTACATTTTTTTTGG+TGG + chr7_1:65408746-65408765 Msa1031060:intron 20.0%
!! ATAAGGAATCTTAATACAAA+AGG - chr7_1:65408837-65408856 None:intergenic 20.0%
!!! ACATTGAAGACTTTTAATAT+CGG + chr7_1:65408974-65408993 Msa1031060:CDS 20.0%
!! CATATTAATGATATTCTTCT+TGG - chr7_1:65409263-65409282 None:intergenic 20.0%
!! GTAACAAACAAATAACTTAA+GGG - chr7_1:65409332-65409351 None:intergenic 20.0%
!! TGTAACAAACAAATAACTTA+AGG - chr7_1:65409333-65409352 None:intergenic 20.0%
!!! GTTATTTGTTTGTTACATTT+TGG + chr7_1:65409336-65409355 Msa1031060:three_prime_UTR 20.0%
!! TTGTAACGTTAATAACTTAT+GGG - chr7_1:65409363-65409382 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG - chr7_1:65409364-65409383 None:intergenic 20.0%
!! GTAACCAACAAATAATTTAA+GGG - chr7_1:65409392-65409411 None:intergenic 20.0%
!! TGTAACCAACAAATAATTTA+AGG - chr7_1:65409393-65409412 None:intergenic 20.0%
!!! ATTATTTGTTGGTTACATTT+TGG + chr7_1:65409396-65409415 Msa1031060:three_prime_UTR 20.0%
!! TTGTAACGTTAATAACTTAT+GGG - chr7_1:65409363-65409382 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG - chr7_1:65409364-65409383 None:intergenic 20.0%
!! AAGTTATTAACGTTACAATT+TGG + chr7_1:65409365-65409384 Msa1031060:three_prime_UTR 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG - chr7_1:65409452-65409471 None:intergenic 20.0%
!! TAAATATTTCCCTTGTTTAG+TGG - chr7_1:65403903-65403922 None:intergenic 25.0%
! TTAAAATATGCTTCATAGAC+TGG - chr7_1:65403948-65403967 None:intergenic 25.0%
!!! TTTTATTTTGAACTGTTGAG+TGG - chr7_1:65404169-65404188 None:intergenic 25.0%
!!! TACAGTGTTTGTTTTTGTTA+AGG - chr7_1:65404490-65404509 None:intergenic 25.0%
! CAAACAACAAACAAATCAAA+AGG + chr7_1:65404926-65404945 Msa1031060:intron 25.0%
! ACAAACAAATCAAAAGGAAA+AGG + chr7_1:65404932-65404951 Msa1031060:intron 25.0%
! AAACGACTATAATTTAGAGA+TGG - chr7_1:65406184-65406203 None:intergenic 25.0%
! CTCTAAATTATAGTCGTTTA+AGG + chr7_1:65406185-65406204 Msa1031060:intron 25.0%
!! GAGGGAGTATAAAATAAATA+TGG + chr7_1:65406441-65406460 Msa1031060:intron 25.0%
!! CTCTTTTTATAAGACATCTT+TGG - chr7_1:65406505-65406524 None:intergenic 25.0%
!! AGTAGGGTTAATTATGTTTT+TGG + chr7_1:65406789-65406808 Msa1031060:intron 25.0%
!! TACAAGATTGCAATTTTGTA+GGG - chr7_1:65406816-65406835 None:intergenic 25.0%
!! TTACAAGATTGCAATTTTGT+AGG - chr7_1:65406817-65406836 None:intergenic 25.0%
! GTGTTAAGAACGTTATTAAA+AGG - chr7_1:65407134-65407153 None:intergenic 25.0%
! AAACAAATTTGGATTGAGTA+AGG + chr7_1:65407199-65407218 Msa1031060:intron 25.0%
!! TGAAGGGTTAATTATGTTTT+TGG - chr7_1:65407318-65407337 None:intergenic 25.0%
! AGGATAGTTATTACTTTGAA+GGG - chr7_1:65407334-65407353 None:intergenic 25.0%
! AAGGATAGTTATTACTTTGA+AGG - chr7_1:65407335-65407354 None:intergenic 25.0%
!!! AATCAAACTTTGTTTTAGCA+GGG - chr7_1:65407479-65407498 None:intergenic 25.0%
!!! TAATCAAACTTTGTTTTAGC+AGG - chr7_1:65407480-65407499 None:intergenic 25.0%
! AGTGCAGAAAAACAAAATTA+GGG + chr7_1:65407797-65407816 Msa1031060:intron 25.0%
! ACTTCTGTCATTATATTTAG+GGG + chr7_1:65407920-65407939 Msa1031060:intron 25.0%
! TATTAACATTATTGGGTAAG+TGG + chr7_1:65408496-65408515 Msa1031060:intron 25.0%
! ATTAACATTATTGGGTAAGT+GGG + chr7_1:65408497-65408516 Msa1031060:intron 25.0%
!! CATAAAAATAAATGGGTTTC+AGG - chr7_1:65408548-65408567 None:intergenic 25.0%
!!! CTGAAACCCATTTATTTTTA+TGG + chr7_1:65408546-65408565 Msa1031060:intron 25.0%
! GGAAAACCCATAAAAATAAA+TGG - chr7_1:65408556-65408575 None:intergenic 25.0%
! AAATCTGGGAATATAATTAG+GGG - chr7_1:65408677-65408696 None:intergenic 25.0%
! CAAAATCTGGGAATATAATT+AGG - chr7_1:65408679-65408698 None:intergenic 25.0%
! ATAGAAATGACACAAAATCT+GGG - chr7_1:65408691-65408710 None:intergenic 25.0%
! TATAGAAATGACACAAAATC+TGG - chr7_1:65408692-65408711 None:intergenic 25.0%
! AAAAGTCTTCAATGTTTGAA+GGG - chr7_1:65408969-65408988 None:intergenic 25.0%
! TAAAAGTCTTCAATGTTTGA+AGG - chr7_1:65408970-65408989 None:intergenic 25.0%
! AATCAACAATATCTTCTTGT+AGG - chr7_1:65409012-65409031 None:intergenic 25.0%
! TTACCATATTTAAGGATTCT+TGG - chr7_1:65409221-65409240 None:intergenic 25.0%
! TAGTCCCTTAAATTATTTGT+TGG + chr7_1:65409385-65409404 Msa1031060:three_prime_UTR 25.0%
! CGAAACCAAAAAATAAGTTA+AGG - chr7_1:65409453-65409472 None:intergenic 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG + chr7_1:65409456-65409475 Msa1031060:three_prime_UTR 25.0%
ATGATGGCATTAACATTTGT+TGG + chr7_1:65404032-65404051 Msa1031060:CDS 30.0%
!! GGGTCTTTTTGGAAAAATAA+CGG + chr7_1:65404262-65404281 Msa1031060:intron 30.0%
!! GGTCTTTTTGGAAAAATAAC+GGG + chr7_1:65404263-65404282 Msa1031060:intron 30.0%
CGGGAATTAAGAAAATTGAA+AGG + chr7_1:65404282-65404301 Msa1031060:intron 30.0%
AAAACAAACACTGTAAACAC+AGG + chr7_1:65404495-65404514 Msa1031060:intron 30.0%
!!! AATTTTTAGGGGTGTTCTTT+GGG - chr7_1:65404551-65404570 None:intergenic 30.0%
!!! TAATTTTTAGGGGTGTTCTT+TGG - chr7_1:65404552-65404571 None:intergenic 30.0%
!! TACGGGAGTTTAATTTTTAG+GGG - chr7_1:65404562-65404581 None:intergenic 30.0%
!! GTACGGGAGTTTAATTTTTA+GGG - chr7_1:65404563-65404582 None:intergenic 30.0%
!! AGTACGGGAGTTTAATTTTT+AGG - chr7_1:65404564-65404583 None:intergenic 30.0%
! GGTTTTTATGGTGTTTCTTT+CGG - chr7_1:65404669-65404688 None:intergenic 30.0%
!!! AGTTTGGTTTTGGGTTTTTA+TGG - chr7_1:65404681-65404700 None:intergenic 30.0%
!!! TTTGGATCAAGTTTGGTTTT+GGG - chr7_1:65404690-65404709 None:intergenic 30.0%
!! ATTTGGATCAAGTTTGGTTT+TGG - chr7_1:65404691-65404710 None:intergenic 30.0%
TCAGTTATTTGGATCAAGTT+TGG - chr7_1:65404697-65404716 None:intergenic 30.0%
!! ACTTTAAGACCAAAACAGAA+GGG + chr7_1:65404753-65404772 Msa1031060:intron 30.0%
GACTATAATTTAGAGATGGA+GGG - chr7_1:65406180-65406199 None:intergenic 30.0%
CCACTAACTACAACTAATAA+GGG - chr7_1:65406285-65406304 None:intergenic 30.0%
TCCACTAACTACAACTAATA+AGG - chr7_1:65406286-65406305 None:intergenic 30.0%
AGTTAGTGGAGTAATTAAGT+TGG + chr7_1:65406296-65406315 Msa1031060:intron 30.0%
! TTAACCCTACTTTGAAAGTT+AGG - chr7_1:65406780-65406799 None:intergenic 30.0%
! CAAGTTTAGAACACTATGAA+CGG + chr7_1:65406972-65406991 Msa1031060:intron 30.0%
!!! TTTTGCGATATTTTTTTCGG+AGG + chr7_1:65407107-65407126 Msa1031060:intron 30.0%
AAGTAAGGACTAAACTTACA+AGG + chr7_1:65407275-65407294 Msa1031060:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - chr7_1:65407857-65407876 None:intergenic 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - chr7_1:65407856-65407875 None:intergenic 30.0%
CAAGATTAGAACACTATGAA+AGG + chr7_1:65407542-65407561 Msa1031060:intron 30.0%
CAGTGCAGAAAAACAAAATT+AGG + chr7_1:65407796-65407815 Msa1031060:intron 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG + chr7_1:65407856-65407875 Msa1031060:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG + chr7_1:65407857-65407876 Msa1031060:intron 30.0%
!!! ATTTGATTTGGTTTTGGGTT+TGG - chr7_1:65407976-65407995 None:intergenic 30.0%
AACCCAAAACCAAATCAAAT+AGG + chr7_1:65407976-65407995 Msa1031060:intron 30.0%
ACCCAAAACCAAATCAAATA+GGG + chr7_1:65407977-65407996 Msa1031060:intron 30.0%
!!! ACCCTATTTGATTTGGTTTT+GGG - chr7_1:65407981-65408000 None:intergenic 30.0%
!!! TACCCTATTTGATTTGGTTT+TGG - chr7_1:65407982-65408001 None:intergenic 30.0%
!! TTATTTTACCTTACCCAAAC+TGG - chr7_1:65408007-65408026 None:intergenic 30.0%
!! ATAACCACTTGCTATACTAT+TGG + chr7_1:65408023-65408042 Msa1031060:intron 30.0%
!! TAACCACTTGCTATACTATT+GGG + chr7_1:65408024-65408043 Msa1031060:intron 30.0%
! TTGTTGCAGGTATTTTATGA+TGG - chr7_1:65408261-65408280 None:intergenic 30.0%
GTACAACAATTTGTATGCTT+TGG + chr7_1:65408431-65408450 Msa1031060:intron 30.0%
!! AAAAAATGGGTTGGGTAATT+GGG - chr7_1:65408599-65408618 None:intergenic 30.0%
!! AAAAAAATGGGTTGGGTAAT+TGG - chr7_1:65408600-65408619 None:intergenic 30.0%
!!! AATTACCCAACCCATTTTTT+TGG + chr7_1:65408599-65408618 Msa1031060:intron 30.0%
!!! ATTACCCAACCCATTTTTTT+GGG + chr7_1:65408600-65408619 Msa1031060:intron 30.0%
! AAAACCCAAAAAAATGGGTT+GGG - chr7_1:65408607-65408626 None:intergenic 30.0%
AAAAACCCAAAAAAATGGGT+TGG - chr7_1:65408608-65408627 None:intergenic 30.0%
!!! ACCCATTTTTTTGGGTTTTT+TGG + chr7_1:65408608-65408627 Msa1031060:intron 30.0%
CCCAAAAAACCCAAAAAAAT+GGG - chr7_1:65408612-65408631 None:intergenic 30.0%
!!! CCCATTTTTTTGGGTTTTTT+GGG + chr7_1:65408609-65408628 Msa1031060:intron 30.0%
ACCCAAAAAACCCAAAAAAA+TGG - chr7_1:65408613-65408632 None:intergenic 30.0%
!!! ATTTTTTTGGGTTTTTTGGG+TGG + chr7_1:65408612-65408631 Msa1031060:intron 30.0%
!!! TTTTTTTGGGTTTTTTGGGT+GGG + chr7_1:65408613-65408632 Msa1031060:intron 30.0%
!! ATATAATTAGGGGTGTTCAT+GGG - chr7_1:65408667-65408686 None:intergenic 30.0%
!! AATATAATTAGGGGTGTTCA+TGG - chr7_1:65408668-65408687 None:intergenic 30.0%
TTTGGTTGAAGAAGCAAAAT+TGG + chr7_1:65408868-65408887 Msa1031060:CDS 30.0%
TCTATAGTAGGATGATATAC+AGG - chr7_1:65408908-65408927 None:intergenic 30.0%
TGTATATCATCCTACTATAG+AGG + chr7_1:65408907-65408926 Msa1031060:CDS 30.0%
! TGAAGACTTTTAATATCGGT+TGG + chr7_1:65408978-65408997 Msa1031060:CDS 30.0%
!! GAAGACTTTTAATATCGGTT+GGG + chr7_1:65408979-65408998 Msa1031060:CDS 30.0%
TGACCAAGAATCCTTAAATA+TGG + chr7_1:65409215-65409234 Msa1031060:exon 30.0%
CCTTCATCTTACCATATTTA+AGG - chr7_1:65409229-65409248 None:intergenic 30.0%
CCTTAAATATGGTAAGATGA+AGG + chr7_1:65409226-65409245 Msa1031060:exon 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG + chr7_1:65409445-65409464 Msa1031060:three_prime_UTR 30.0%
AATAACATAAAGGACCAGAT+TGG - chr7_1:65409505-65409524 None:intergenic 30.0%
AATGGAGAACCACTAAACAA+GGG + chr7_1:65403891-65403910 Msa1031060:five_prime_UTR 35.0%
AAATATGCTTCATAGACTGG+TGG - chr7_1:65403945-65403964 None:intergenic 35.0%
!!! TTTTCTAAAGTCACGTTTCG+AGG + chr7_1:65403992-65404011 Msa1031060:five_prime_UTR 35.0%
TTCGAGGAATTAACAACTGA+TGG + chr7_1:65404008-65404027 Msa1031060:five_prime_UTR 35.0%
TCGAGGAATTAACAACTGAT+GGG + chr7_1:65404009-65404028 Msa1031060:five_prime_UTR 35.0%
ATTAACAACTGATGGGATGA+TGG + chr7_1:65404016-65404035 Msa1031060:exon 35.0%
CAAATCTCATCATTACCTCT+TGG - chr7_1:65404118-65404137 None:intergenic 35.0%
CCAAAAAGACCCTCTAATTA+GGG - chr7_1:65404254-65404273 None:intergenic 35.0%
TCCAAAAAGACCCTCTAATT+AGG - chr7_1:65404255-65404274 None:intergenic 35.0%
! TTTGTTAAGGTGTCTGTCTT+AGG - chr7_1:65404477-65404496 None:intergenic 35.0%
!!! ATTTTTAGGGGTGTTCTTTG+GGG - chr7_1:65404550-65404569 None:intergenic 35.0%
! TTTTATGGTGTTTCTTTCGG+TGG - chr7_1:65404666-65404685 None:intergenic 35.0%
!! ATCACTTTTGATTCGAGATC+GGG - chr7_1:65404722-65404741 None:intergenic 35.0%
!! GATCACTTTTGATTCGAGAT+CGG - chr7_1:65404723-65404742 None:intergenic 35.0%
!!! TTTTGGTCTTAAAGTCTGGT+GGG - chr7_1:65404748-65404767 None:intergenic 35.0%
!!! TCTGTTTTGGTCTTAAAGTC+TGG - chr7_1:65404752-65404771 None:intergenic 35.0%
!! GACTTTAAGACCAAAACAGA+AGG + chr7_1:65404752-65404771 Msa1031060:intron 35.0%
!! CAATCTTGTTTGGCTTGATA+TGG - chr7_1:65404809-65404828 None:intergenic 35.0%
TGTCTAGTTGCAATCTTGTT+TGG - chr7_1:65404819-65404838 None:intergenic 35.0%
TGTCTTACTTATTGTGTGCT+GGG - chr7_1:65404884-65404903 None:intergenic 35.0%
TTGTCTTACTTATTGTGTGC+TGG - chr7_1:65404885-65404904 None:intergenic 35.0%
ACAAACAACATGATAAGCGA+TGG + chr7_1:65404901-65404920 Msa1031060:intron 35.0%
! GTTAAGGTGTTTAAGGTGTT+TGG - chr7_1:65404983-65405002 None:intergenic 35.0%
! TTGGGTTGTTAAGGTGTTTA+AGG - chr7_1:65404990-65405009 None:intergenic 35.0%
!!! TTTGCGTTTTTGGGTTGTTA+AGG - chr7_1:65404999-65405018 None:intergenic 35.0%
!! TAGCTCTTGTTTGCGTTTTT+GGG - chr7_1:65405008-65405027 None:intergenic 35.0%
!! TTGATTTGGGTGATTTCCTT+TGG - chr7_1:65405069-65405088 None:intergenic 35.0%
TGCGTATGAGAGCTATTAAT+GGG - chr7_1:65405125-65405144 None:intergenic 35.0%
TTGCGTATGAGAGCTATTAA+TGG - chr7_1:65405126-65405145 None:intergenic 35.0%
!!! TCGAATTTTGCTTGATTTGG+TGG - chr7_1:65405263-65405282 None:intergenic 35.0%
! GGTTCGAATTTTGCTTGATT+TGG - chr7_1:65405266-65405285 None:intergenic 35.0%
! GATCTGTTTTCAGATCTAGT+TGG - chr7_1:65405795-65405814 None:intergenic 35.0%
AAGAAAAACGAAGGAGGAAA+GGG + chr7_1:65405994-65406013 Msa1031060:intron 35.0%
!! TTAGAGAGAGAAAGCGTTTA+TGG + chr7_1:65406053-65406072 Msa1031060:intron 35.0%
CGACTATAATTTAGAGATGG+AGG - chr7_1:65406181-65406200 None:intergenic 35.0%
CCCTTATTAGTTGTAGTTAG+TGG + chr7_1:65406282-65406301 Msa1031060:intron 35.0%
TGACAATTATTGTGAGACAG+AGG + chr7_1:65406422-65406441 Msa1031060:intron 35.0%
GACAATTATTGTGAGACAGA+GGG + chr7_1:65406423-65406442 Msa1031060:intron 35.0%
TGTCTTATATTTAGGGACGA+AGG + chr7_1:65406545-65406564 Msa1031060:intron 35.0%
TCGTCATATTCCCCTTAAAA+AGG + chr7_1:65406734-65406753 Msa1031060:intron 35.0%
TCCTACCTAACTTTCAAAGT+AGG + chr7_1:65406772-65406791 Msa1031060:intron 35.0%
CCTACCTAACTTTCAAAGTA+GGG + chr7_1:65406773-65406792 Msa1031060:intron 35.0%
!!! TGAGTGCAGAAGTTTTTTGT+AGG + chr7_1:65407230-65407249 Msa1031060:intron 35.0%
!!! GAGTGCAGAAGTTTTTTGTA+GGG + chr7_1:65407231-65407250 Msa1031060:intron 35.0%
!!! TGTTTTTGGTCCCTACAAAA+TGG - chr7_1:65406803-65406822 None:intergenic 35.0%
AAGTAGGGACTAAACTTACA+AGG - chr7_1:65407841-65407860 None:intergenic 35.0%
AAGTAGGGACTAAACTTACA+AGG + chr7_1:65407841-65407860 Msa1031060:intron 35.0%
!! ATTATATTTAGGGGTGTTCG+TGG + chr7_1:65407929-65407948 Msa1031060:intron 35.0%
!! TTATATTTAGGGGTGTTCGT+GGG + chr7_1:65407930-65407949 Msa1031060:intron 35.0%
! TGGACAAACCCACTAATTTT+TGG + chr7_1:65408053-65408072 Msa1031060:intron 35.0%
! GGACAAACCCACTAATTTTT+GGG + chr7_1:65408054-65408073 Msa1031060:intron 35.0%
!!! AAACCCACTAATTTTTGGGT+TGG + chr7_1:65408058-65408077 Msa1031060:intron 35.0%
!!! AACCCACTAATTTTTGGGTT+GGG + chr7_1:65408059-65408078 Msa1031060:intron 35.0%
AACCCAACCCAAAAATTAGT+GGG - chr7_1:65408064-65408083 None:intergenic 35.0%
!! ATGCAACTTTAGTTTGTTGC+AGG - chr7_1:65408274-65408293 None:intergenic 35.0%
! AGGGTACAATTTGCATGTTT+TGG + chr7_1:65408379-65408398 Msa1031060:intron 35.0%
!!! TATTGGGTAAGTGGGTTTTT+TGG + chr7_1:65408505-65408524 Msa1031060:intron 35.0%
!!! ATTGGGTAAGTGGGTTTTTT+GGG + chr7_1:65408506-65408525 Msa1031060:intron 35.0%
! GTGGGTATGGTTTCTAAAAA+TGG - chr7_1:65408577-65408596 None:intergenic 35.0%
TGTTTCACTTCCTCTATAGT+AGG - chr7_1:65408920-65408939 None:intergenic 35.0%
TTGTCGATAGCAAAATGAGA+GGG + chr7_1:65409035-65409054 Msa1031060:CDS 35.0%
AATTCATAGCCAAGTATCAC+AGG + chr7_1:65409059-65409078 Msa1031060:CDS 35.0%
ATTCATAGCCAAGTATCACA+GGG + chr7_1:65409060-65409079 Msa1031060:CDS 35.0%
! TATGAACCTCTTTTCATAGC+CGG + chr7_1:65409088-65409107 Msa1031060:CDS 35.0%
TCATGGATGAATTGTTCTCA+AGG + chr7_1:65409125-65409144 Msa1031060:CDS 35.0%
ACTCATTGAGATAGAGACAT+TGG + chr7_1:65409168-65409187 Msa1031060:CDS 35.0%
GTTTAGTGGTTCTCCATTCT+TGG - chr7_1:65403889-65403908 None:intergenic 40.0%
GAATGGAGAACCACTAAACA+AGG + chr7_1:65403890-65403909 Msa1031060:five_prime_UTR 40.0%
ACAACTACCACTTCTTCTCA+AGG + chr7_1:65404062-65404081 Msa1031060:CDS 40.0%
CAACTACCACTTCTTCTCAA+GGG + chr7_1:65404063-65404082 Msa1031060:CDS 40.0%
AACTACCACTTCTTCTCAAG+GGG + chr7_1:65404064-65404083 Msa1031060:CDS 40.0%
AATTACCCCTTGAGAAGAAG+TGG - chr7_1:65404072-65404091 None:intergenic 40.0%
AAAGACCCTCTAATTAGGGA+CGG - chr7_1:65404250-65404269 None:intergenic 40.0%
! CCCTAATTAGAGGGTCTTTT+TGG + chr7_1:65404251-65404270 Msa1031060:intron 40.0%
TGGACGACACAAGATACAAA+TGG + chr7_1:65404378-65404397 Msa1031060:intron 40.0%
TATGGTGTACCGTCTATATG+CGG - chr7_1:65404406-65404425 None:intergenic 40.0%
!! TTATCTTTGGGGGCTTTGTT+TGG - chr7_1:65404433-65404452 None:intergenic 40.0%
!! TGTTGGTGGGTTTATCTTTG+GGG - chr7_1:65404444-65404463 None:intergenic 40.0%
!! GTGTTGGTGGGTTTATCTTT+GGG - chr7_1:65404445-65404464 None:intergenic 40.0%
!! TGTGTTGGTGGGTTTATCTT+TGG - chr7_1:65404446-65404465 None:intergenic 40.0%
!!! TTTTTAGGGGTGTTCTTTGG+GGG - chr7_1:65404549-65404568 None:intergenic 40.0%
!!! GTTTTGGTCTTAAAGTCTGG+TGG - chr7_1:65404749-65404768 None:intergenic 40.0%
ATGGTAATTCTCTGGTCTAC+CGG - chr7_1:65404790-65404809 None:intergenic 40.0%
GGCTTGATATGGTAATTCTC+TGG - chr7_1:65404798-65404817 None:intergenic 40.0%
!!! GTTACTTTTGCTTCGAGATC+GGG - chr7_1:65404848-65404867 None:intergenic 40.0%
!!! GGTTACTTTTGCTTCGAGAT+CGG - chr7_1:65404849-65404868 None:intergenic 40.0%
GATCTCGAAGCAAAAGTAAC+CGG + chr7_1:65404848-65404867 Msa1031060:intron 40.0%
! AGGTGTTTAAGGTGTTTGGA+GGG - chr7_1:65404979-65404998 None:intergenic 40.0%
! AAGGTGTTTAAGGTGTTTGG+AGG - chr7_1:65404980-65404999 None:intergenic 40.0%
!! CTAGCTCTTGTTTGCGTTTT+TGG - chr7_1:65405009-65405028 None:intergenic 40.0%
ATTTGGGTGATTTCCTTTGG+AGG - chr7_1:65405066-65405085 None:intergenic 40.0%
TATGAGAGCTATTAATGGGG+TGG - chr7_1:65405121-65405140 None:intergenic 40.0%
GCGTATGAGAGCTATTAATG+GGG - chr7_1:65405124-65405143 None:intergenic 40.0%
!! TGTTGGTGATTTGATTGAGG+TGG - chr7_1:65405210-65405229 None:intergenic 40.0%
!! AGGTGTTGGTGATTTGATTG+AGG - chr7_1:65405213-65405232 None:intergenic 40.0%
CGATCTGTGTGATCCAATTT+CGG - chr7_1:65405408-65405427 None:intergenic 40.0%
!! CATCGATTGTGGTTTTTGTG+AGG - chr7_1:65405470-65405489 None:intergenic 40.0%
! TTTTCAGATCTAGTTGGAGG+AGG - chr7_1:65405789-65405808 None:intergenic 40.0%
! CTGTTTTCAGATCTAGTTGG+AGG - chr7_1:65405792-65405811 None:intergenic 40.0%
TTCATGTCCAGTTTCTGTTG+CGG - chr7_1:65405820-65405839 None:intergenic 40.0%
CAAGATGTAGATTCTAGCAG+CGG - chr7_1:65405951-65405970 None:intergenic 40.0%
GCTAGAATCTACATCTTGAG+TGG + chr7_1:65405953-65405972 Msa1031060:intron 40.0%
GAATCTACATCTTGAGTGGT+TGG + chr7_1:65405957-65405976 Msa1031060:intron 40.0%
ACATCTTGAGTGGTTGGATT+TGG + chr7_1:65405963-65405982 Msa1031060:intron 40.0%
AGTGGTTGGATTTGGATTGT+GGG + chr7_1:65405971-65405990 Msa1031060:intron 40.0%
GATTGTGGGAAGAAAAACGA+AGG + chr7_1:65405985-65406004 Msa1031060:intron 40.0%
GAAGAAAAACGAAGGAGGAA+AGG + chr7_1:65405993-65406012 Msa1031060:intron 40.0%
AGAAAAACGAAGGAGGAAAG+GGG + chr7_1:65405995-65406014 Msa1031060:intron 40.0%
CTTATATTTAGGGACGAAGG+CGG + chr7_1:65406548-65406567 Msa1031060:intron 40.0%
! CCCTACTTTGAAAGTTAGGT+AGG - chr7_1:65406776-65406795 None:intergenic 40.0%
!! TTACAAGGTCGCCATTTTGT+AGG + chr7_1:65407290-65407309 Msa1031060:intron 40.0%
!! TACAAGGTCGCCATTTTGTA+GGG + chr7_1:65407291-65407310 Msa1031060:intron 40.0%
! CTGGAGTACCCTATTTGATT+TGG - chr7_1:65407988-65408007 None:intergenic 40.0%
! TCAAATAGGGTACTCCAGTT+TGG + chr7_1:65407990-65408009 Msa1031060:intron 40.0%
! CAAATAGGGTACTCCAGTTT+GGG + chr7_1:65407991-65408010 Msa1031060:intron 40.0%
!! CACTTGCTATACTATTGGGT+GGG + chr7_1:65408028-65408047 Msa1031060:intron 40.0%
CAACCCAACCCAAAAATTAG+TGG - chr7_1:65408065-65408084 None:intergenic 40.0%
!!! CACTAATTTTTGGGTTGGGT+TGG + chr7_1:65408063-65408082 Msa1031060:intron 40.0%
!!! ATTTTTGGGTTGGGTTGGAT+TGG + chr7_1:65408068-65408087 Msa1031060:intron 40.0%
!!! TTTTTGGGTTGGGTTGGATT+GGG + chr7_1:65408069-65408088 Msa1031060:intron 40.0%
!!! TGGGTTTGACCAGGTTTTTT+GGG + chr7_1:65408632-65408651 Msa1031060:intron 40.0%
CAAATCACAAGCTAAAGCCA+AGG - chr7_1:65408814-65408833 None:intergenic 40.0%
GGAAGTGAAACAAGTGATTG+AGG + chr7_1:65408928-65408947 Msa1031060:CDS 40.0%
AAACAAGTGATTGAGGCAGA+AGG + chr7_1:65408935-65408954 Msa1031060:CDS 40.0%
GTTGTCGATAGCAAAATGAG+AGG + chr7_1:65409034-65409053 Msa1031060:CDS 40.0%
TGTCGATAGCAAAATGAGAG+GGG + chr7_1:65409036-65409055 Msa1031060:CDS 40.0%
ATAAACAGCCCTGTGATACT+TGG - chr7_1:65409071-65409090 None:intergenic 40.0%
! ATGAACCTCTTTTCATAGCC+GGG + chr7_1:65409089-65409108 Msa1031060:CDS 40.0%
! CATGATGTTTTCTCCAAACC+CGG - chr7_1:65409110-65409129 None:intergenic 40.0%
GTTCTCAAGGTTTGCAAATC+TGG + chr7_1:65409138-65409157 Msa1031060:CDS 40.0%
! TAAAGGACCAGATTGGTTGA+CGG - chr7_1:65409498-65409517 None:intergenic 40.0%
ATTCTTGGCCAAACCTTTCG+GGG - chr7_1:65403874-65403893 None:intergenic 45.0%
CATTCTTGGCCAAACCTTTC+GGG - chr7_1:65403875-65403894 None:intergenic 45.0%
CCATTCTTGGCCAAACCTTT+CGG - chr7_1:65403876-65403895 None:intergenic 45.0%
ATGCTTCATAGACTGGTGGA+GGG - chr7_1:65403941-65403960 None:intergenic 45.0%
TATGCTTCATAGACTGGTGG+AGG - chr7_1:65403942-65403961 None:intergenic 45.0%
TTCTCAAGGGGTAATTGCCA+TGG + chr7_1:65404076-65404095 Msa1031060:CDS 45.0%
TGCCATGGTACTCAATGAGA+TGG + chr7_1:65404091-65404110 Msa1031060:CDS 45.0%
GACCATCTCATTGAGTACCA+TGG - chr7_1:65404096-65404115 None:intergenic 45.0%
ACTCAATGAGATGGTCCAAG+AGG + chr7_1:65404100-65404119 Msa1031060:CDS 45.0%
TACCTCCGTCCCTAATTAGA+GGG + chr7_1:65404242-65404261 Msa1031060:intron 45.0%
!! CAAATGGTGCCGCATATAGA+CGG + chr7_1:65404394-65404413 Msa1031060:intron 45.0%
!! GTTGGTGGGTTTATCTTTGG+GGG - chr7_1:65404443-65404462 None:intergenic 45.0%
! TCTTAGGTGGTGATGTGTGT+TGG - chr7_1:65404461-65404480 None:intergenic 45.0%
! GTTAAGGTGTCTGTCTTAGG+TGG - chr7_1:65404474-65404493 None:intergenic 45.0%
!! TCAGCTTGGGTGTTGAAGTA+CGG - chr7_1:65404580-65404599 None:intergenic 45.0%
TCTTCTGGATAGGAGCTCTT+CGG - chr7_1:65404610-65404629 None:intergenic 45.0%
AGCTGCATCATCTTCTGGAT+AGG - chr7_1:65404620-65404639 None:intergenic 45.0%
TGGTGTTTCTTTCGGTGGAT+CGG - chr7_1:65404661-65404680 None:intergenic 45.0%
GAGATCGGGAGTCAGTTATT+TGG - chr7_1:65404708-65404727 None:intergenic 45.0%
TGGTAATTCTCTGGTCTACC+GGG - chr7_1:65404789-65404808 None:intergenic 45.0%
ACTTATTGTGTGCTGGGTTC+CGG - chr7_1:65404878-65404897 None:intergenic 45.0%
AAGGAAAAGGCTCAGCTCAA+CGG + chr7_1:65404945-65404964 Msa1031060:intron 45.0%
!! TGTCTTGGTGGATTTGGTGT+CGG - chr7_1:65405155-65405174 None:intergenic 45.0%
! TGATTTGATTGAGGTGGTGG+TGG - chr7_1:65405204-65405223 None:intergenic 45.0%
TGGTGATTTGATTGAGGTGG+TGG - chr7_1:65405207-65405226 None:intergenic 45.0%
TGTAAGGATCGTGGTGGTAA+TGG - chr7_1:65405312-65405331 None:intergenic 45.0%
GTTTGTCGTTGTAAGGATCG+TGG - chr7_1:65405321-65405340 None:intergenic 45.0%
CCTTACAACGACAAACGATC+CGG + chr7_1:65405325-65405344 Msa1031060:intron 45.0%
CTTACAACGACAAACGATCC+GGG + chr7_1:65405326-65405345 Msa1031060:intron 45.0%
CGTTGAAGGAGGATTAATCG+TGG + chr7_1:65405353-65405372 Msa1031060:intron 45.0%
TCTGTGTGATCCAATTTCGG+CGG - chr7_1:65405405-65405424 None:intergenic 45.0%
! TTGTGGTTTTTGTGAGGTGG+TGG - chr7_1:65405464-65405483 None:intergenic 45.0%
! CGATTGTGGTTTTTGTGAGG+TGG - chr7_1:65405467-65405486 None:intergenic 45.0%
ACCAAAGCACAATCCAACAG+CGG + chr7_1:65405609-65405628 Msa1031060:intron 45.0%
AGATCTGTGCAGATCTGTGT+TGG - chr7_1:65405699-65405718 None:intergenic 45.0%
TTCGCGTTTCGTTTCGTTGT+CGG - chr7_1:65405844-65405863 None:intergenic 45.0%
ACAACGAAACGAAACGCGAA+TGG + chr7_1:65405844-65405863 Msa1031060:intron 45.0%
AAACCGGAGTGAACAGTGAA+CGG + chr7_1:65405881-65405900 Msa1031060:intron 45.0%
GAGTGGTTGGATTTGGATTG+TGG + chr7_1:65405970-65405989 Msa1031060:intron 45.0%
TGTGGGAAGAAAAACGAAGG+AGG + chr7_1:65405988-65406007 Msa1031060:intron 45.0%
GAAAAACGAAGGAGGAAAGG+GGG + chr7_1:65405996-65406015 Msa1031060:intron 45.0%
GAAGTGTAGAGAGAAGTCAG+AGG + chr7_1:65406020-65406039 Msa1031060:intron 45.0%
CCACCCAATAGTATAGCAAG+TGG - chr7_1:65408030-65408049 None:intergenic 45.0%
!! CCACTTGCTATACTATTGGG+TGG + chr7_1:65408027-65408046 Msa1031060:intron 45.0%
! GCTATACTATTGGGTGGGTT+TGG + chr7_1:65408033-65408052 Msa1031060:intron 45.0%
!! GTTGGGTTGGATTGGGTAAT+GGG + chr7_1:65408076-65408095 Msa1031060:intron 45.0%
!! AATGGGTTGGGTAATTGGGT+GGG - chr7_1:65408595-65408614 None:intergenic 45.0%
!! AAATGGGTTGGGTAATTGGG+TGG - chr7_1:65408596-65408615 None:intergenic 45.0%
!!! TTTTTTGGGTGGGTTTGACC+AGG + chr7_1:65408623-65408642 Msa1031060:intron 45.0%
!!! GTGGGTTTGACCAGGTTTTT+TGG + chr7_1:65408631-65408650 Msa1031060:intron 45.0%
TTGGGTCAACCCAAAAAACC+TGG - chr7_1:65408644-65408663 None:intergenic 45.0%
!! ATTAGGGGTGTTCATGGGTT+GGG - chr7_1:65408662-65408681 None:intergenic 45.0%
!! AATTAGGGGTGTTCATGGGT+TGG - chr7_1:65408663-65408682 None:intergenic 45.0%
CGGGTTTGGAGAAAACATCA+TGG + chr7_1:65409108-65409127 Msa1031060:CDS 45.0%
!!! TAAGTAAATTTTTTTTTATA+GGG - chr7_1:65407446-65407465 None:intergenic 5.0%
!!! ATAAGTAAATTTTTTTTTAT+AGG - chr7_1:65407447-65407466 None:intergenic 5.0%
!! AAAAAATAGAAAAATAAATT+GGG - chr7_1:65408105-65408124 None:intergenic 5.0%
!! AAAAAAATAGAAAAATAAAT+TGG - chr7_1:65408106-65408125 None:intergenic 5.0%
!! ATAAAAAATATTAACATTAT+TGG + chr7_1:65408488-65408507 Msa1031060:intron 5.0%
!! TAAAAAATATTAACATTATT+GGG + chr7_1:65408489-65408508 Msa1031060:intron 5.0%
CCGAAAGGTTTGGCCAAGAA+TGG + chr7_1:65403873-65403892 Msa1031060:five_prime_UTR 50.0%
CTACCTCCGTCCCTAATTAG+AGG + chr7_1:65404241-65404260 Msa1031060:intron 50.0%
!! GGGGCTTTGTTTGGTGGTTA+TGG - chr7_1:65404424-65404443 None:intergenic 50.0%
!! TCTTTGGGGGCTTTGTTTGG+TGG - chr7_1:65404430-65404449 None:intergenic 50.0%
! AGGTGGTGATGTGTGTTGGT+GGG - chr7_1:65404457-65404476 None:intergenic 50.0%
! TAGGTGGTGATGTGTGTTGG+TGG - chr7_1:65404458-65404477 None:intergenic 50.0%
!! CAGCTTGGGTGTTGAAGTAC+GGG - chr7_1:65404579-65404598 None:intergenic 50.0%
CTTCGGATGTGGTTCAGCTT+GGG - chr7_1:65404593-65404612 None:intergenic 50.0%
TCTTCGGATGTGGTTCAGCT+TGG - chr7_1:65404594-65404613 None:intergenic 50.0%
GTGGAAGCTGCATCATCTTC+TGG - chr7_1:65404625-65404644 None:intergenic 50.0%
TGTTTCTTTCGGTGGATCGG+AGG - chr7_1:65404658-65404677 None:intergenic 50.0%
GTAATTCTCTGGTCTACCGG+GGG - chr7_1:65404787-65404806 None:intergenic 50.0%
GGTAATTCTCTGGTCTACCG+GGG - chr7_1:65404788-65404807 None:intergenic 50.0%
TTTGCTTCGAGATCGGGAGT+CGG - chr7_1:65404842-65404861 None:intergenic 50.0%
AGGAAAAGGCTCAGCTCAAC+GGG + chr7_1:65404946-65404965 Msa1031060:intron 50.0%
AGAGCTAGTGACGACGAACA+AGG + chr7_1:65405021-65405040 Msa1031060:intron 50.0%
AACAAGGACCCGTGTAACAG+AGG + chr7_1:65405037-65405056 Msa1031060:intron 50.0%
!! GAGGAGGTGGGTGTTGATTT+GGG - chr7_1:65405082-65405101 None:intergenic 50.0%
!! TGAGGAGGTGGGTGTTGATT+TGG - chr7_1:65405083-65405102 None:intergenic 50.0%
CGTTGTTTAGGTGAGGAGGT+GGG - chr7_1:65405094-65405113 None:intergenic 50.0%
AGAGCTATTAATGGGGTGGC+TGG - chr7_1:65405117-65405136 None:intergenic 50.0%
!! TGGTGGATTTGGTGTCGGAA+CGG - chr7_1:65405150-65405169 None:intergenic 50.0%
!! TGAGGCTGTCTTGGTGGATT+TGG - chr7_1:65405161-65405180 None:intergenic 50.0%
!! TTTGATTGAGGTGGTGGTGG+TGG - chr7_1:65405201-65405220 None:intergenic 50.0%
!! GTGGTAATGGTTGTTCGCGT+CGG - chr7_1:65405299-65405318 None:intergenic 50.0%
TGTCGTTGTAAGGATCGTGG+TGG - chr7_1:65405318-65405337 None:intergenic 50.0%
CCGGATCGTTTGTCGTTGTA+AGG - chr7_1:65405328-65405347 None:intergenic 50.0%
ATCCTCCTTCAACGAACTCC+CGG - chr7_1:65405347-65405366 None:intergenic 50.0%
ACATCTGCAACCGCCGAAAT+TGG + chr7_1:65405392-65405411 Msa1031060:intron 50.0%
!! TGGTTTTTGTGAGGTGGTGG+TGG - chr7_1:65405461-65405480 None:intergenic 50.0%
GCTGTTGGATTGTGCTTTGG+TGG - chr7_1:65405610-65405629 None:intergenic 50.0%
!! TTGGTTTTCCTCCTTCCTGG+CGG - chr7_1:65405680-65405699 None:intergenic 50.0%
!!! GTGTTGGTTTTCCTCCTTCC+TGG - chr7_1:65405683-65405702 None:intergenic 50.0%
ATTAGGTGGTTTCGGTGGTG+GGG - chr7_1:65405752-65405771 None:intergenic 50.0%
GATTAGGTGGTTTCGGTGGT+GGG - chr7_1:65405753-65405772 None:intergenic 50.0%
!! GGTCACGGATTAGGTGGTTT+CGG - chr7_1:65405760-65405779 None:intergenic 50.0%
!! TGAGATGGTCACGGATTAGG+TGG - chr7_1:65405766-65405785 None:intergenic 50.0%
AGGTGAGATGGTCACGGATT+AGG - chr7_1:65405769-65405788 None:intergenic 50.0%
TCTAGTTGGAGGAGGTGAGA+TGG - chr7_1:65405781-65405800 None:intergenic 50.0%
AGATCAGCCGCAACAGAAAC+TGG + chr7_1:65405810-65405829 Msa1031060:intron 50.0%
GGAGCAAAACGAAGCCAAAC+CGG + chr7_1:65405865-65405884 Msa1031060:intron 50.0%
GTTCACTGTTCACTCCGGTT+TGG - chr7_1:65405882-65405901 None:intergenic 50.0%
TCTCCGTTCACTGTTCACTC+CGG - chr7_1:65405887-65405906 None:intergenic 50.0%
GTGAACGGAGATGCTGAAGA+AGG + chr7_1:65405896-65405915 Msa1031060:intron 50.0%
AACGGAGATGCTGAAGAAGG+TGG + chr7_1:65405899-65405918 Msa1031060:intron 50.0%
AGATGCTGAAGAAGGTGGTG+CGG + chr7_1:65405904-65405923 Msa1031060:intron 50.0%
GATGTAGATTCTAGCAGCGG+TGG - chr7_1:65405948-65405967 None:intergenic 50.0%
!! TATTTAGGGGTGTTCGTGGG+TGG + chr7_1:65407933-65407952 Msa1031060:intron 50.0%
!! ATTTAGGGGTGTTCGTGGGT+GGG + chr7_1:65407934-65407953 Msa1031060:intron 50.0%
! AGGGTACTCCAGTTTGGGTA+AGG + chr7_1:65407996-65408015 Msa1031060:intron 50.0%
!! GGTTGGGTTGGATTGGGTAA+TGG + chr7_1:65408075-65408094 Msa1031060:intron 50.0%
GTTGGGTAATTGGGTGGGTA+TGG - chr7_1:65408590-65408609 None:intergenic 50.0%
CCAAACCCGGCTATGAAAAG+AGG - chr7_1:65409097-65409116 None:intergenic 50.0%
! CCTCTTTTCATAGCCGGGTT+TGG + chr7_1:65409094-65409113 Msa1031060:CDS 50.0%
GGTTGACGGAGGAAGAGTTA+AGG - chr7_1:65409484-65409503 None:intergenic 50.0%
TCTTCCTCCGTCAACCAATC+TGG + chr7_1:65409488-65409507 Msa1031060:three_prime_UTR 50.0%
GACCCTCTAATTAGGGACGG+AGG - chr7_1:65404247-65404266 None:intergenic 55.0%
TCCATACCTCACGTCTTGCG+GGG - chr7_1:65404362-65404381 None:intergenic 55.0%
GTCCATACCTCACGTCTTGC+GGG - chr7_1:65404363-65404382 None:intergenic 55.0%
CGTCCATACCTCACGTCTTG+CGG - chr7_1:65404364-65404383 None:intergenic 55.0%
GTAGTGACGATGGGTGGTTG+TGG - chr7_1:65404523-65404542 None:intergenic 55.0%
GGATAGGAGCTCTTCGGATG+TGG - chr7_1:65404604-65404623 None:intergenic 55.0%
!!! GTGAGGGTGCCCTTCTGTTT+TGG - chr7_1:65404765-65404784 None:intergenic 55.0%
AGCAAAAGTAACCGGCCCAC+CGG + chr7_1:65404856-65404875 Msa1031060:intron 55.0%
ATTGTGTGCTGGGTTCCGGT+GGG - chr7_1:65404874-65404893 None:intergenic 55.0%
TATTGTGTGCTGGGTTCCGG+TGG - chr7_1:65404875-65404894 None:intergenic 55.0%
TGGAGGCAGCCTCTGTTACA+CGG - chr7_1:65405049-65405068 None:intergenic 55.0%
GTAACAGAGGCTGCCTCCAA+AGG + chr7_1:65405050-65405069 Msa1031060:intron 55.0%
GCGTTGTTTAGGTGAGGAGG+TGG - chr7_1:65405095-65405114 None:intergenic 55.0%
CTGGCGTTGTTTAGGTGAGG+AGG - chr7_1:65405098-65405117 None:intergenic 55.0%
TGGCTGGCGTTGTTTAGGTG+AGG - chr7_1:65405101-65405120 None:intergenic 55.0%
!!! TGGTGGTGGTGGTTTTGCGT+GGG - chr7_1:65405190-65405209 None:intergenic 55.0%
! ACGTCACGTTGTGGAGGTGT+TGG - chr7_1:65405227-65405246 None:intergenic 55.0%
ACACCTCCACAACGTGACGT+CGG + chr7_1:65405227-65405246 Msa1031060:intron 55.0%
GTAATGGTTGTTCGCGTCGG+TGG - chr7_1:65405296-65405315 None:intergenic 55.0%
ACGATCCGGGAGTTCGTTGA+AGG + chr7_1:65405339-65405358 Msa1031060:intron 55.0%
ATCCGGGAGTTCGTTGAAGG+AGG + chr7_1:65405342-65405361 Msa1031060:intron 55.0%
!! TGGTGGTGTTACGTGGTGGA+GGG - chr7_1:65405444-65405463 None:intergenic 55.0%
! ACGTGGCTGGTCATCGATTG+TGG - chr7_1:65405481-65405500 None:intergenic 55.0%
!!! TTGGGTTTTGGCTACGTGGC+TGG - chr7_1:65405494-65405513 None:intergenic 55.0%
ATTTGGCAGCTGGAGCGGTT+GGG - chr7_1:65405512-65405531 None:intergenic 55.0%
TGGGTGTTCGGTCTCGCATT+TGG - chr7_1:65405529-65405548 None:intergenic 55.0%
ACAGTCTGCGCTCTGCTGTT+GGG - chr7_1:65405548-65405567 None:intergenic 55.0%
AACAGTCTGCGCTCTGCTGT+TGG - chr7_1:65405549-65405568 None:intergenic 55.0%
! GTGCTTTGGTGGTCGCGTTT+CGG - chr7_1:65405599-65405618 None:intergenic 55.0%
GCCGCTGTTGGATTGTGCTT+TGG - chr7_1:65405613-65405632 None:intergenic 55.0%
ACAATCCAACAGCGGCAGCT+TGG + chr7_1:65405617-65405636 Msa1031060:intron 55.0%
! TTAGGTGGTTTCGGTGGTGG+GGG - chr7_1:65405751-65405770 None:intergenic 55.0%
GGATTAGGTGGTTTCGGTGG+TGG - chr7_1:65405754-65405773 None:intergenic 55.0%
!! CACGGATTAGGTGGTTTCGG+TGG - chr7_1:65405757-65405776 None:intergenic 55.0%
TGGAGGAGGTGAGATGGTCA+CGG - chr7_1:65405775-65405794 None:intergenic 55.0%
AAGAAGGTGGTGCGGAGACA+AGG + chr7_1:65405912-65405931 Msa1031060:intron 55.0%
! TTCGTGGGTGGGTTTGGGTT+GGG + chr7_1:65407945-65407964 Msa1031060:intron 55.0%
! AGGACCAGATTGGTTGACGG+AGG - chr7_1:65409495-65409514 None:intergenic 55.0%
TACCTCACGTCTTGCGGGGA+TGG - chr7_1:65404358-65404377 None:intergenic 60.0%
TCCCCGCAAGACGTGAGGTA+TGG + chr7_1:65404358-65404377 Msa1031060:intron 60.0%
! TGGGGGTGCGTAGTGACGAT+GGG - chr7_1:65404532-65404551 None:intergenic 60.0%
! TTGGGGGTGCGTAGTGACGA+TGG - chr7_1:65404533-65404552 None:intergenic 60.0%
GATCGGAGGTCGAGAGGTTG+TGG - chr7_1:65404644-65404663 None:intergenic 60.0%
GGAGGCAGCCTCTGTTACAC+GGG - chr7_1:65405048-65405067 None:intergenic 60.0%
TGGGGTGGCTGGCGTTGTTT+AGG - chr7_1:65405106-65405125 None:intergenic 60.0%
GGTTCGTGAGGCTGTCTTGG+TGG - chr7_1:65405167-65405186 None:intergenic 60.0%
! GTTTTGCGTGGGGGTTCGTG+AGG - chr7_1:65405179-65405198 None:intergenic 60.0%
!!! GTGGTGGTGGTTTTGCGTGG+GGG - chr7_1:65405188-65405207 None:intergenic 60.0%
!!! GGTGGTGGTGGTTTTGCGTG+GGG - chr7_1:65405189-65405208 None:intergenic 60.0%
!!! GTGGTGGTGGTGGTTTTGCG+TGG - chr7_1:65405191-65405210 None:intergenic 60.0%
CTCCACAACGTGACGTCGGA+GGG + chr7_1:65405231-65405250 Msa1031060:intron 60.0%
TCCACAACGTGACGTCGGAG+GGG + chr7_1:65405232-65405251 Msa1031060:intron 60.0%
! GTTCGCGTCGGTGGCTGTTT+AGG - chr7_1:65405287-65405306 None:intergenic 60.0%
!! TGGTGTTACGTGGTGGAGGG+TGG - chr7_1:65405441-65405460 None:intergenic 60.0%
!! GTGGTGGTGTTACGTGGTGG+AGG - chr7_1:65405445-65405464 None:intergenic 60.0%
!! GTGGTGGTGGTGTTACGTGG+TGG - chr7_1:65405448-65405467 None:intergenic 60.0%
!! GAGGTGGTGGTGGTGTTACG+TGG - chr7_1:65405451-65405470 None:intergenic 60.0%
!!! GCGGTTGGGTTTTGGCTACG+TGG - chr7_1:65405498-65405517 None:intergenic 60.0%
! CAGCTGGAGCGGTTGGGTTT+TGG - chr7_1:65405506-65405525 None:intergenic 60.0%
CATTTGGCAGCTGGAGCGGT+TGG - chr7_1:65405513-65405532 None:intergenic 60.0%
CTCGCATTTGGCAGCTGGAG+CGG - chr7_1:65405517-65405536 None:intergenic 60.0%
TCGGTCTCGCATTTGGCAGC+TGG - chr7_1:65405522-65405541 None:intergenic 60.0%
GCGCTCTGCTGTTGGGTGTT+CGG - chr7_1:65405541-65405560 None:intergenic 60.0%
ACGCTGCTACAACCACCGCA+AGG + chr7_1:65405573-65405592 Msa1031060:intron 60.0%
TGTCACCAAGCTGCCGCTGT+TGG - chr7_1:65405625-65405644 None:intergenic 60.0%
! ACAGAAGCACAACCACCGCC+AGG + chr7_1:65405662-65405681 Msa1031060:intron 60.0%
AAGCACAACCACCGCCAGGA+AGG + chr7_1:65405666-65405685 Msa1031060:intron 60.0%
! GTTTTCCTCCTTCCTGGCGG+TGG - chr7_1:65405677-65405696 None:intergenic 60.0%
CTACCACCACCTCACACCAC+CGG + chr7_1:65405717-65405736 Msa1031060:intron 60.0%
!! TAGGTGGTTTCGGTGGTGGG+GGG - chr7_1:65405750-65405769 None:intergenic 60.0%
! GGGTGTTCGTGGGTGGGTTT+GGG + chr7_1:65407940-65407959 Msa1031060:intron 60.0%
! GTTCGTGGGTGGGTTTGGGT+TGG + chr7_1:65407944-65407963 Msa1031060:intron 60.0%
!! GGGTGGGTTTGGGTTGGGTT+TGG + chr7_1:65407950-65407969 Msa1031060:intron 60.0%
GGGTGCGTAGTGACGATGGG+TGG - chr7_1:65404529-65404548 None:intergenic 65.0%
TCGGTGGATCGGAGGTCGAG+AGG - chr7_1:65404650-65404669 None:intergenic 65.0%
CTCTGGTCTACCGGGGGTGA+GGG - chr7_1:65404781-65404800 None:intergenic 65.0%
TCTCTGGTCTACCGGGGGTG+AGG - chr7_1:65404782-65404801 None:intergenic 65.0%
GGGGGTTCGTGAGGCTGTCT+TGG - chr7_1:65405170-65405189 None:intergenic 65.0%
CCTCCGACGTCACGTTGTGG+AGG - chr7_1:65405233-65405252 None:intergenic 65.0%
CCTCCACAACGTGACGTCGG+AGG + chr7_1:65405230-65405249 Msa1031060:intron 65.0%
CCACAACGTGACGTCGGAGG+GGG + chr7_1:65405233-65405252 Msa1031060:intron 65.0%
! ACGTGGTGGAGGGTGGTGTG+TGG - chr7_1:65405434-65405453 None:intergenic 65.0%
GTGGTCGCGTTTCGGCCTTG+CGG - chr7_1:65405591-65405610 None:intergenic 65.0%
! GCGGCAGCTTGGTGACAGTC+AGG + chr7_1:65405628-65405647 Msa1031060:intron 65.0%
CACAACCACCGCCAGGAAGG+AGG + chr7_1:65405669-65405688 Msa1031060:intron 65.0%
! GGGGTGTTCGTGGGTGGGTT+TGG + chr7_1:65407939-65407958 Msa1031060:intron 65.0%
CGCCATCCCCGCAAGACGTG+AGG + chr7_1:65404353-65404372 Msa1031060:intron 70.0%
!! CAGAAGGGCACCCTCACCCC+CGG + chr7_1:65404768-65404787 Msa1031060:intron 70.0%
TGTGCTGGGTTCCGGTGGGC+CGG - chr7_1:65404870-65404889 None:intergenic 70.0%
CCCCCTCCGACGTCACGTTG+TGG - chr7_1:65405236-65405255 None:intergenic 70.0%
GTCGCGTTTCGGCCTTGCGG+TGG - chr7_1:65405588-65405607 None:intergenic 70.0%
GGTCCGGTGGTGTGAGGTGG+TGG - chr7_1:65405723-65405742 None:intergenic 70.0%
GGTGGTCCGGTGGTGTGAGG+TGG - chr7_1:65405726-65405745 None:intergenic 70.0%
! GGTGGTGGTCCGGTGGTGTG+AGG - chr7_1:65405729-65405748 None:intergenic 70.0%
!! GTTTCGGTGGTGGGGGGTGG+TGG - chr7_1:65405744-65405763 None:intergenic 70.0%
!! GTGGTTTCGGTGGTGGGGGG+TGG - chr7_1:65405747-65405766 None:intergenic 70.0%
!! GGTGGTGGGGGGTGGTGGTC+CGG - chr7_1:65405739-65405758 None:intergenic 75.0%
!! GGTGGGGGGTGGTGGTCCGG+TGG - chr7_1:65405736-65405755 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 65403866 65409533 65403866 ID=Msa1031060;Name=Msa1031060
chr7_1 mRNA 65403866 65409533 65403866 ID=Msa1031060-mRNA-1;Parent=Msa1031060;Name=Msa1031060-mRNA-1;_AED=0.40;_eAED=0.40;_QI=166|1|1|1|1|1|2|302|151
chr7_1 exon 65403866 65404121 65403866 ID=Msa1031060-mRNA-1:exon:14547;Parent=Msa1031060-mRNA-1
chr7_1 exon 65408866 65409533 65408866 ID=Msa1031060-mRNA-1:exon:14548;Parent=Msa1031060-mRNA-1
chr7_1 five_prime_UTR 65403866 65404031 65403866 ID=Msa1031060-mRNA-1:five_prime_utr;Parent=Msa1031060-mRNA-1
chr7_1 CDS 65404032 65404121 65404032 ID=Msa1031060-mRNA-1:cds;Parent=Msa1031060-mRNA-1
chr7_1 CDS 65408866 65409231 65408866 ID=Msa1031060-mRNA-1:cds;Parent=Msa1031060-mRNA-1
chr7_1 three_prime_UTR 65409232 65409533 65409232 ID=Msa1031060-mRNA-1:three_prime_utr;Parent=Msa1031060-mRNA-1
Gene Sequence

>Msa1031060

ATGATGGCATTAACATTTGTTGGCAGAGAAACAACTACCACTTCTTCTCAAGGGGTAATTGCCATGGTACTCAATGAGATGGTCCAAGAGGGTTTGGTTGAAGAAGCAAAATTGGACTTGTTTAATTTGCCTGTATATCATCCTACTATAGAGGAAGTGAAACAAGTGATTGAGGCAGAAGGATCTTTTACCCTTCAAACATTGAAGACTTTTAATATCGGTTGGGATGCAAACCTACAAGAAGATATTGTTGATTATGTTGTCGATAGCAAAATGAGAGGGGAATTCATAGCCAAGTATCACAGGGCTGTTTATGAACCTCTTTTCATAGCCGGGTTTGGAGAAAACATCATGGATGAATTGTTCTCAAGGTTTGCAAATCTGGTTGCACAACTCATTGAGATAGAGACATTGGAGTTTACTAATATTGTATTGTTCATGACCAAGAATCCTTAA

Protein sequence

>Msa1031060

MMALTFVGRETTTTSSQGVIAMVLNEMVQEGLVEEAKLDLFNLPVYHPTIEEVKQVIEAEGSFTLQTLKTFNIGWDANLQEDIVDYVVDSKMRGEFIAKYHRAVYEPLFIAGFGENIMDELFSRFANLVAQLIEIETLEFTNIVLFMTKNP*