AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0357470


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0357470 MtrunA17_Chr3g0095791 94.304 316 18 0 1 316 376 691 0.0 612
Msa0357470 MtrunA17_Chr2g0307191 78.797 316 67 0 1 316 377 692 0.0 530
Msa0357470 MtrunA17_Chr2g0298581 75.633 316 77 0 1 316 377 692 0.0 523
Msa0357470 MtrunA17_Chr3g0077511 67.508 317 101 1 2 316 378 694 6.74e-162 467
Msa0357470 MtrunA17_Chr1g0186381 35.331 317 196 5 2 314 400 711 1.28e-67 224
Msa0357470 MtrunA17_Chr4g0046401 35.897 312 199 1 4 314 401 712 5.27e-65 217
Msa0357470 MtrunA17_Chr3g0102531 29.787 329 210 5 7 314 378 706 7.73e-45 162
Msa0357470 MtrunA17_Chr3g0102541 29.934 304 206 3 19 316 409 711 3.91e-43 157
Msa0357470 MtrunA17_Chr3g0102551 29.268 287 198 2 31 312 426 712 7.18e-42 154
Msa0357470 MtrunA17_Chr2g0307221 73.333 75 20 0 88 162 1 75 1.19e-35 124
Msa0357470 MtrunA17_Chr8g0364641 30.097 309 200 6 16 315 639 940 2.29e-35 135
Msa0357470 MtrunA17_Chr3g0088821 28.477 302 208 5 17 314 739 1036 5.38e-34 132
Msa0357470 MtrunA17_Chr8g0352231 27.723 303 211 4 17 315 739 1037 6.03e-34 131
Msa0357470 MtrunA17_Chr8g0383701 28.716 296 202 5 24 315 765 1055 1.52e-33 130
Msa0357470 MtrunA17_Chr2g0322331 28.754 313 213 8 2 308 40 348 2.19e-33 126
Msa0357470 MtrunA17_Chr4g0073711 28.716 296 201 4 25 315 707 997 2.70e-33 129
Msa0357470 MtrunA17_Chr2g0296991 26.403 303 214 4 17 315 706 1003 4.56e-33 129
Msa0357470 MtrunA17_Chr7g0267731 27.063 303 213 5 17 315 647 945 1.11e-32 128
Msa0357470 MtrunA17_Chr8g0379241 27.393 303 210 4 17 314 650 947 5.25e-31 123
Msa0357470 MtrunA17_Chr2g0284211 26.316 304 214 4 16 314 637 935 8.88e-30 119
Msa0357470 MtrunA17_Chr3g0137951 27.575 301 202 6 23 315 753 1045 2.03e-29 118
Msa0357470 MtrunA17_Chr1g0183381 25.828 302 214 5 17 314 567 862 1.55e-28 115
Msa0357470 MtrunA17_Chr3g0078671 25.249 301 208 5 25 315 715 1008 8.72e-28 113
Msa0357470 MtrunA17_Chr1g0201731 28.239 301 207 4 19 315 761 1056 1.04e-27 113
Msa0357470 MtrunA17_Chr2g0322351 26.460 291 196 9 24 308 426 704 1.19e-26 110
Msa0357470 MtrunA17_Chr2g0297351 27.869 305 188 9 27 315 698 986 3.28e-25 106
Msa0357470 MtrunA17_Chr2g0322361 25.402 311 225 5 8 313 414 722 1.10e-24 104
Msa0357470 MtrunA17_Chr2g0322371 24.595 309 224 6 11 313 407 712 2.22e-24 103
Msa0357470 MtrunA17_Chr4g0025201 23.248 314 229 7 8 313 406 715 2.10e-21 94.7
Msa0357470 MtrunA17_Chr1g0165421 25.325 308 224 4 11 315 789 1093 1.74e-20 92.4
Msa0357470 MtrunA17_Chr5g0410641 23.649 296 220 5 23 315 791 1083 9.98e-20 90.1
Msa0357470 MtrunA17_Chr4g0039801 26.384 307 196 7 24 315 813 1104 9.25e-19 87.0
Msa0357470 MtrunA17_Chr1g0165411 25.085 295 215 4 24 315 774 1065 9.61e-19 87.0
Msa0357470 MtrunA17_Chr7g0269741 24.252 301 213 5 23 315 839 1132 1.64e-18 86.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0357470 AT4G24010.1 36.610 295 182 4 24 316 415 706 1.76e-59 203
Msa0357470 AT4G24000.2 32.639 288 190 3 24 309 213 498 2.37e-56 191
Msa0357470 AT4G24000.1 32.639 288 190 3 24 309 405 690 6.23e-55 190
Msa0357470 AT4G23990.2 32.000 300 200 3 12 309 208 505 1.91e-51 178
Msa0357470 AT4G23990.1 33.333 288 188 3 24 309 434 719 5.30e-50 177
Msa0357470 AT1G55850.1 29.861 288 199 2 30 314 417 704 5.35e-43 157
Msa0357470 AT5G17420.1 31.023 303 199 5 18 315 688 985 1.57e-38 145
Msa0357470 AT5G05170.1 27.541 305 205 6 18 314 727 1023 9.35e-33 128
Msa0357470 AT4G18780.1 28.213 319 217 5 1 314 630 941 1.76e-32 127
Msa0357470 AT4G32410.1 28.239 301 200 6 23 315 747 1039 4.09e-32 126
Msa0357470 AT5G09870.1 26.861 309 205 6 17 315 731 1028 4.23e-32 126
Msa0357470 AT5G64740.1 26.214 309 207 6 17 315 746 1043 1.04e-30 122
Msa0357470 AT5G44030.3 28.378 296 203 7 24 314 437 728 2.13e-30 121
Msa0357470 AT2G21770.1 25.974 308 207 6 18 315 750 1046 2.13e-30 121
Msa0357470 AT5G44030.2 28.283 297 204 7 24 315 745 1037 3.45e-30 121
Msa0357470 AT5G44030.1 28.283 297 204 7 24 315 716 1008 4.17e-30 120
Msa0357470 AT4G39350.1 27.273 308 205 5 17 315 745 1042 4.38e-30 120
Msa0357470 AT2G25540.1 26.246 301 206 6 23 315 727 1019 1.07e-29 119
Msa0357470 AT3G03050.1 23.529 289 215 4 27 312 819 1104 4.81e-24 103
Msa0357470 AT2G32530.1 27.551 294 185 8 3 277 413 697 1.32e-22 99.0
Msa0357470 AT2G33100.2 25.763 295 213 5 24 315 709 1000 7.60e-22 96.7
Msa0357470 AT2G33100.1 25.763 295 213 5 24 315 709 1000 7.60e-22 96.7
Msa0357470 AT4G38190.1 24.399 291 214 4 27 314 780 1067 2.11e-21 95.5
Msa0357470 AT2G32540.1 25.094 267 180 6 25 275 430 692 3.31e-20 91.7
Msa0357470 AT5G16910.1 23.051 295 221 4 24 315 816 1107 2.07e-19 89.4
Msa0357470 AT1G32180.1 24.430 307 228 3 11 314 638 943 1.31e-18 87.0
Msa0357470 AT1G32180.2 24.430 307 228 3 11 314 638 943 1.31e-18 87.0
Msa0357470 AT2G32610.1 26.316 304 180 9 4 277 408 697 2.75e-18 85.9
Msa0357470 AT1G02730.1 23.256 301 216 5 23 315 851 1144 5.62e-18 85.1
Msa0357470 AT4G15290.1 26.148 283 187 8 12 278 417 693 9.28e-18 84.3
Msa0357470 AT2G32620.1 25.828 302 178 11 3 277 413 695 2.14e-16 80.5
Msa0357470 AT2G32620.4 25.828 302 178 11 3 277 317 599 2.21e-16 80.1
Msa0357470 AT4G15320.4 24.648 284 191 7 12 278 432 709 7.15e-16 78.6
Msa0357470 AT4G15320.5 24.648 284 191 7 12 278 417 694 7.84e-16 78.6
Msa0357470 AT4G15320.3 24.648 284 191 7 12 278 417 694 1.03e-15 78.2
Msa0357470 AT2G32620.3 27.811 169 97 4 3 161 413 566 2.51e-13 70.9
Msa0357470 AT4G15320.2 27.333 150 107 2 12 161 463 610 4.31e-13 70.5
Msa0357470 AT4G15320.1 27.333 150 107 2 12 161 506 653 4.72e-13 70.1
Msa0357470 AT2G32620.2 29.787 141 90 3 3 143 413 544 3.08e-11 64.3

Find 65 sgRNAs with CRISPR-Local

Find 273 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAAACATTGTTTGCTTCTT+TGG 0.132316 3_1:+40668351 Msa0357470:CDS
TTTGCTTCTTTGGTGGTTTA+TGG 0.157159 3_1:+40668361 Msa0357470:CDS
TTGTTCATCCCACCAAATTC+TGG 0.226805 3_1:-40668130 None:intergenic
CCAGTTTGTGTTACTTTCAT+AGG 0.261272 3_1:-40663033 None:intergenic
CTTATAATCCCCTCAATAAT+AGG 0.283744 3_1:-40668462 None:intergenic
ACTATTGCCTACACACTATA+TGG 0.309599 3_1:+40667182 Msa0357470:CDS
AAAGGTTAGACAATGAATAA+TGG 0.332845 3_1:-40667132 None:intergenic
GTGTGTAGGCAATAGTATAT+TGG 0.358637 3_1:-40667175 None:intergenic
AAACTTGAGAGTACCGTTAC+TGG 0.362985 3_1:+40666927 Msa0357470:CDS
AATATAGCCCATTCACTTAC+GGG 0.364012 3_1:+40667096 Msa0357470:CDS
GTGGTGGCTCCTCCAGAATT+TGG 0.369642 3_1:+40668118 Msa0357470:CDS
TGAAGGTGCAACATTGTTCA+TGG 0.370739 3_1:+40668305 Msa0357470:CDS
AAGGTTAGACAATGAATAAT+GGG 0.392893 3_1:-40667131 None:intergenic
AGTTTGATTGTAAAATCAAT+TGG 0.395815 3_1:+40668156 Msa0357470:CDS
CCTATGAAAGTAACACAAAC+TGG 0.407291 3_1:+40663033 Msa0357470:CDS
TGTGTAGGCAATAGTATATT+GGG 0.407784 3_1:-40667174 None:intergenic
AAATATAGCCCATTCACTTA+CGG 0.428766 3_1:+40667095 Msa0357470:CDS
TCTAAGTTATCCTATTATTG+AGG 0.444182 3_1:+40668452 Msa0357470:CDS
CCTCAGATTTGCTTCTTGAA+AGG 0.449878 3_1:+40667212 Msa0357470:CDS
ATTATGAGCAACACAATCAA+TGG 0.451362 3_1:-40668330 None:intergenic
ACATCTGAACTTCTCTTGCT+TGG 0.451840 3_1:+40667065 Msa0357470:CDS
ACCTCCATCCTCTGCAATGA+AGG 0.452138 3_1:-40666956 None:intergenic
AACATTGTTTGCTTCTTTGG+TGG 0.455728 3_1:+40668354 Msa0357470:CDS
CTAAGTTATCCTATTATTGA+GGG 0.461749 3_1:+40668453 Msa0357470:CDS
CTTGAAATCCCGTAAGTGAA+TGG 0.463902 3_1:-40667104 None:intergenic
TTGAAATCCCGTAAGTGAAT+GGG 0.480525 3_1:-40667103 None:intergenic
TAAGTATGAAACGCAAGGTT+GGG 0.483268 3_1:+40668481 Msa0357470:CDS
TAAGGTAAAGCAATATGAGC+AGG 0.488142 3_1:+40668269 Msa0357470:CDS
ACCTCCTTCATTGCAGAGGA+TGG 0.492040 3_1:+40666952 Msa0357470:CDS
GATTGCTTCAGTTGGTAAAG+TGG 0.503160 3_1:+40667042 Msa0357470:CDS
CAAAGCAGTTGACAAAGATA+AGG 0.507849 3_1:+40668251 Msa0357470:CDS
AATATAATGTTGAATTTGAG+TGG 0.511523 3_1:-40668082 None:intergenic
AGGAATTTCTGTATTTCCAA+AGG 0.511930 3_1:+40667232 Msa0357470:CDS
TCAAATTCAACATTATATTG+AGG 0.524787 3_1:+40668086 Msa0357470:CDS
TGTGGTTGTGAAGTAGCAAA+AGG 0.531218 3_1:-40667150 None:intergenic
AAAATGGTTTGGGTTGAACA+AGG 0.531329 3_1:+40668209 Msa0357470:CDS
GGCAATAGTATATTGGGTTG+TGG 0.531752 3_1:-40667168 None:intergenic
GTGGCTCCTCCAGAATTTGG+TGG 0.535117 3_1:+40668121 Msa0357470:CDS
CAATCCCTCTTTCATGTCAG+TGG 0.552279 3_1:-40667024 None:intergenic
TGTTACAGGTTACAGAACCT+TGG 0.553078 3_1:+40668031 Msa0357470:intron
ATAAGTATGAAACGCAAGGT+TGG 0.556954 3_1:+40668480 Msa0357470:CDS
AAATGGTTTGGGTTGAACAA+GGG 0.557787 3_1:+40668210 Msa0357470:CDS
ATTGAGGTAATTTCAAGTGG+TGG 0.566111 3_1:+40668102 Msa0357470:CDS
TGCACCCACTGACATGAAAG+AGG 0.566701 3_1:+40667019 Msa0357470:CDS
TATATTGAGGTAATTTCAAG+TGG 0.585743 3_1:+40668099 Msa0357470:CDS
ATGGAGACTACTCAATGTGA+AGG 0.587324 3_1:+40668380 Msa0357470:CDS
TAAGTTATCCTATTATTGAG+GGG 0.588766 3_1:+40668454 Msa0357470:CDS
TGGCTCCTCCAGAATTTGGT+GGG 0.594327 3_1:+40668122 Msa0357470:CDS
GAAAGAGGGATTGCTTCAGT+TGG 0.598558 3_1:+40667034 Msa0357470:CDS
TTCATCCCACCAAATTCTGG+AGG 0.600177 3_1:-40668127 None:intergenic
AATCCCTCTTTCATGTCAGT+GGG 0.600324 3_1:-40667023 None:intergenic
AATGATTCCATATAGTGTGT+AGG 0.600717 3_1:-40667189 None:intergenic
GGCTACCTCCTTCATTGCAG+AGG 0.605797 3_1:+40666948 Msa0357470:CDS
TTTACAAGAAGCGAGTGTAG+TGG 0.619981 3_1:+40663001 Msa0357470:CDS
ATGAAGGAGGTAGCCAGTAA+CGG 0.622292 3_1:-40666940 None:intergenic
CCTTTCAAGAAGCAAATCTG+AGG 0.627942 3_1:-40667212 None:intergenic
AAGGTAAAGCAATATGAGCA+GGG 0.632419 3_1:+40668270 Msa0357470:CDS
TCCATCCTCTGCAATGAAGG+AGG 0.634394 3_1:-40666953 None:intergenic
GATTATAAGTATGAAACGCA+AGG 0.635785 3_1:+40668476 Msa0357470:CDS
GAGTCACTGAAAGCAATATG+TGG 0.636647 3_1:+40662939 Msa0357470:CDS
TCCTTCATTGCAGAGGATGG+AGG 0.645824 3_1:+40666955 Msa0357470:CDS
GCACCCACTGACATGAAAGA+GGG 0.658795 3_1:+40667020 Msa0357470:CDS
ACTGTAAACACTATAAACCA+AGG 0.661029 3_1:-40668048 None:intergenic
GGTGCACATCCTAAGAAACA+TGG 0.692331 3_1:-40667002 None:intergenic
TAACACAAACTGGAGTACTG+AGG 0.700667 3_1:+40663043 Msa0357470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAATATTTTAGTTTTTGA+TGG + chr3_1:40663140-40663159 Msa0357470:intron 10.0%
!!! TATTGTTTTTTAAAATTGAA+AGG - chr3_1:40663454-40663473 None:intergenic 10.0%
!!! TTTCTCTAAAAAATAAAATA+AGG + chr3_1:40663871-40663890 Msa0357470:intron 10.0%
!!! ATGTTTTCAAATTAAAAAAT+AGG + chr3_1:40663980-40663999 Msa0357470:intron 10.0%
!!! TGTTTTCAAATTAAAAAATA+GGG + chr3_1:40663981-40664000 Msa0357470:intron 10.0%
!! AGTACATATTTAATTATTAA+GGG - chr3_1:40664333-40664352 None:intergenic 10.0%
!! TAGTACATATTTAATTATTA+AGG - chr3_1:40664334-40664353 None:intergenic 10.0%
!! CTTTATAATTTAAATATCAA+TGG + chr3_1:40664438-40664457 Msa0357470:intron 10.0%
!!! TTGTTTCATATTTTATAATA+GGG + chr3_1:40664564-40664583 Msa0357470:intron 10.0%
!! TTACAAAAAAAATAAGATAA+AGG - chr3_1:40665564-40665583 None:intergenic 10.0%
!!! TTATTTTTTTTGTAACAATT+TGG + chr3_1:40665569-40665588 Msa0357470:intron 10.0%
!! TAATAAAAAAAATGAGAAAA+AGG + chr3_1:40666348-40666367 Msa0357470:intron 10.0%
!!! TTTAGAATGTATTTTTTATT+TGG - chr3_1:40666659-40666678 None:intergenic 10.0%
!! TAAAAAATACATTCTAAATA+TGG + chr3_1:40666661-40666680 Msa0357470:intron 10.0%
!! AAAAAATACATTCTAAATAT+GGG + chr3_1:40666662-40666681 Msa0357470:intron 10.0%
!!! ATAAAAAACTATTTTTGTAT+AGG + chr3_1:40667328-40667347 Msa0357470:intron 10.0%
!! TAAATTAATATACTTAATCA+AGG - chr3_1:40668007-40668026 None:intergenic 10.0%
!! TATTAATTTATTTATGTTAC+AGG + chr3_1:40668017-40668036 Msa0357470:intron 10.0%
!!! ATTTGAAGATCTTTTTATAA+AGG - chr3_1:40663197-40663216 None:intergenic 15.0%
!! TTATAAAAAGATCTTCAAAT+TGG + chr3_1:40663197-40663216 Msa0357470:intron 15.0%
!!! ATGTTTTTTTGTATGTTTTA+CGG + chr3_1:40663554-40663573 Msa0357470:intron 15.0%
!!! TTATTTGAATAACCATTTTA+TGG + chr3_1:40663635-40663654 Msa0357470:intron 15.0%
!!! TATTTGAATAACCATTTTAT+GGG + chr3_1:40663636-40663655 Msa0357470:intron 15.0%
!!! ATCTGAAATTTTTAAAATTG+AGG + chr3_1:40663953-40663972 Msa0357470:intron 15.0%
!! AAAAGTTAATCTTAATCATA+AGG + chr3_1:40664170-40664189 Msa0357470:intron 15.0%
!!! ATGTATATTTTAACATAAGA+GGG - chr3_1:40664245-40664264 None:intergenic 15.0%
!!! AATGTATATTTTAACATAAG+AGG - chr3_1:40664246-40664265 None:intergenic 15.0%
!!! GTGTAGATTTTATTTTTAAA+GGG - chr3_1:40664274-40664293 None:intergenic 15.0%
!!! AGTGTAGATTTTATTTTTAA+AGG - chr3_1:40664275-40664294 None:intergenic 15.0%
!! TATTTAATTATTAAGGGAAA+AGG - chr3_1:40664327-40664346 None:intergenic 15.0%
!!! ATGAATCTATTTTTCTTAAA+TGG - chr3_1:40664416-40664435 None:intergenic 15.0%
!! ACAATAATTACAGTAAAATA+TGG - chr3_1:40664529-40664548 None:intergenic 15.0%
!!! GTTGTTTCATATTTTATAAT+AGG + chr3_1:40664563-40664582 Msa0357470:intron 15.0%
!! ACAAAATTGAACAATAAAAA+TGG + chr3_1:40665383-40665402 Msa0357470:intron 15.0%
!! CAAAATTGAACAATAAAAAT+GGG + chr3_1:40665384-40665403 Msa0357470:intron 15.0%
!! TAACATTAATTCATGATATT+TGG + chr3_1:40666172-40666191 Msa0357470:intron 15.0%
!!! CTTATTTATTTGTAACATTT+TGG - chr3_1:40666434-40666453 None:intergenic 15.0%
!! AATCAAAATGTAATATACAT+TGG - chr3_1:40666578-40666597 None:intergenic 15.0%
!!! AATGTATATTACATTTTGAT+TGG + chr3_1:40666577-40666596 Msa0357470:intron 15.0%
!! ATATCAATCAAGTTAATAAT+GGG - chr3_1:40666880-40666899 None:intergenic 15.0%
!!! ACTTTGATGATAATAAATAG+AGG + chr3_1:40663608-40663627 Msa0357470:intron 20.0%
!! ACTAACAAGAGAAAATAAAA+AGG + chr3_1:40664021-40664040 Msa0357470:intron 20.0%
!!! TATGCATATTACATTTTGAT+TGG - chr3_1:40664103-40664122 None:intergenic 20.0%
!!! TGTATATTTTAACATAAGAG+GGG - chr3_1:40664244-40664263 None:intergenic 20.0%
!!! AATCTATTTTTCTTAAATGG+TGG - chr3_1:40664413-40664432 None:intergenic 20.0%
!!! ACTTAAAAAAAAAGTATTGC+GGG - chr3_1:40664670-40664689 None:intergenic 20.0%
!!! CACTTAAAAAAAAAGTATTG+CGG - chr3_1:40664671-40664690 None:intergenic 20.0%
!! TAAAGAAGAAATTTGAATGA+AGG - chr3_1:40664843-40664862 None:intergenic 20.0%
!! CAAAATTGAACAATCAAAAT+GGG - chr3_1:40664908-40664927 None:intergenic 20.0%
!! ACAAAATTGAACAATCAAAA+TGG - chr3_1:40664909-40664928 None:intergenic 20.0%
!!! ATCGTGACTTTTTTTTATTT+AGG + chr3_1:40664995-40665014 Msa0357470:intron 20.0%
!!! CTTTTTGATTTGATTTTTCT+TGG - chr3_1:40665244-40665263 None:intergenic 20.0%
!! TGAACACCTAAATATAATTA+AGG + chr3_1:40665520-40665539 Msa0357470:intron 20.0%
!! ATCTTGCCTTAATTATATTT+AGG - chr3_1:40665529-40665548 None:intergenic 20.0%
!!! ATCTTTATTTTTTCTCGTTT+AGG + chr3_1:40665598-40665617 Msa0357470:intron 20.0%
!! TAACATTAATTCACGATATT+TGG - chr3_1:40665828-40665847 None:intergenic 20.0%
!! TTGCAACATTTATGAAATTA+AGG - chr3_1:40665890-40665909 None:intergenic 20.0%
!! TTAATTTCATAAATGTTGCA+AGG + chr3_1:40665889-40665908 Msa0357470:intron 20.0%
!!! AAACTAAATCTCTTTTCTAT+AGG + chr3_1:40666109-40666128 Msa0357470:intron 20.0%
!!! AACTAAATCTCTTTTCTATA+GGG + chr3_1:40666110-40666129 Msa0357470:intron 20.0%
!!! ATCTTTATTTTTTTCCGTTT+AGG - chr3_1:40666405-40666424 None:intergenic 20.0%
!! ACGGAAAAAAATAAAGATAA+AGG + chr3_1:40666407-40666426 Msa0357470:intron 20.0%
!! TATAGACAAGATTACATTAT+AGG - chr3_1:40666465-40666484 None:intergenic 20.0%
!! ATTCTAAATATGGGTAATTA+AGG + chr3_1:40666671-40666690 Msa0357470:intron 20.0%
!! GATATCAATCAAGTTAATAA+TGG - chr3_1:40666881-40666900 None:intergenic 20.0%
!! CATGAAAAATATTAGTTGAT+AGG - chr3_1:40667452-40667471 None:intergenic 20.0%
!! TGCAAAATGACATAAAAAAA+TGG - chr3_1:40667963-40667982 None:intergenic 20.0%
!! AATATAATGTTGAATTTGAG+TGG - chr3_1:40668085-40668104 None:intergenic 20.0%
!! TCAAATTCAACATTATATTG+AGG + chr3_1:40668086-40668105 Msa0357470:CDS 20.0%
!! AGTTTGATTGTAAAATCAAT+TGG + chr3_1:40668156-40668175 Msa0357470:CDS 20.0%
!!! AAGGATTTTAATGAAATGTT+TGG + chr3_1:40668399-40668418 Msa0357470:CDS 20.0%
! AAAAGTTGAAATTGTAGCAA+TGG - chr3_1:40663107-40663126 None:intergenic 25.0%
! ATTTGAATTCACACCTTATA+AGG - chr3_1:40663366-40663385 None:intergenic 25.0%
!! TTTTTGAATTATGAGATGAG+AGG - chr3_1:40663426-40663445 None:intergenic 25.0%
!!! AGTATTGTTTTGAAAAGAAC+TGG - chr3_1:40663591-40663610 None:intergenic 25.0%
! CTACATTTCTTTGTATATCT+TGG - chr3_1:40663666-40663685 None:intergenic 25.0%
! CAAGATATACAAAGAAATGT+AGG + chr3_1:40663664-40663683 Msa0357470:intron 25.0%
!!! TTATTTTTAGCAATGTACTG+TGG - chr3_1:40663906-40663925 None:intergenic 25.0%
! ATAAGTCCTAAATTCTGTAA+TGG + chr3_1:40663922-40663941 Msa0357470:intron 25.0%
!! TTTTCTCCATTACAGAATTT+AGG - chr3_1:40663931-40663950 None:intergenic 25.0%
! TGTAATTCAAGCATCTTATA+GGG - chr3_1:40664303-40664322 None:intergenic 25.0%
! TTGTAATTCAAGCATCTTAT+AGG - chr3_1:40664304-40664323 None:intergenic 25.0%
! TACATCAAATTTCTTTCATC+TGG + chr3_1:40664741-40664760 Msa0357470:intron 25.0%
! GAATGTAAGTGATGAATTTA+AGG - chr3_1:40664771-40664790 None:intergenic 25.0%
! GAAACAAGAATTGATCAATA+GGG - chr3_1:40664871-40664890 None:intergenic 25.0%
! TGAAACAAGAATTGATCAAT+AGG - chr3_1:40664872-40664891 None:intergenic 25.0%
!! GTTAGCATATTTTATTAGGT+TGG - chr3_1:40665024-40665043 None:intergenic 25.0%
! AAGTCATCTGTTATACTTTA+AGG - chr3_1:40665191-40665210 None:intergenic 25.0%
! GAATGTAACCGATAAATTTA+AGG + chr3_1:40665422-40665441 Msa0357470:intron 25.0%
! CTGAATGTCCTTAAATTTAT+CGG - chr3_1:40665433-40665452 None:intergenic 25.0%
! AATTAAGGCAAGATTACATT+AGG + chr3_1:40665535-40665554 Msa0357470:intron 25.0%
! ATTAAGGCAAGATTACATTA+GGG + chr3_1:40665536-40665555 Msa0357470:intron 25.0%
! TGTGTTTAAAAGAAGATTTG+AGG - chr3_1:40666143-40666162 None:intergenic 25.0%
! TACAAAAGTTAAGATTGTTC+TGG + chr3_1:40665953-40665972 Msa0357470:intron 25.0%
! TGTGTTTAAAAGAAGATTTG+AGG + chr3_1:40666143-40666162 Msa0357470:intron 25.0%
!!! TGGTATTTTTGGATAAAGAT+AGG - chr3_1:40666985-40667004 None:intergenic 25.0%
! AAGGTTAGACAATGAATAAT+GGG - chr3_1:40667134-40667153 None:intergenic 25.0%
! AAAGGTTAGACAATGAATAA+TGG - chr3_1:40667135-40667154 None:intergenic 25.0%
! TTAATCGTAGTAATTACCTT+TGG - chr3_1:40667251-40667270 None:intergenic 25.0%
! TATACATAAACACTTATGCA+AGG - chr3_1:40667281-40667300 None:intergenic 25.0%
! TTGCATAAGTGTTTATGTAT+AGG + chr3_1:40667280-40667299 Msa0357470:intron 25.0%
! ATCAACTATAGTTAGTTGAT+AGG + chr3_1:40667399-40667418 Msa0357470:intron 25.0%
! TATATTGAGGTAATTTCAAG+TGG + chr3_1:40668099-40668118 Msa0357470:CDS 25.0%
! TTATAGAAGCAGCAAAAAAA+TGG + chr3_1:40668193-40668212 Msa0357470:CDS 25.0%
! ATAAACATTGTTTGCTTCTT+TGG + chr3_1:40668351-40668370 Msa0357470:CDS 25.0%
! TCTAAGTTATCCTATTATTG+AGG + chr3_1:40668452-40668471 Msa0357470:CDS 25.0%
! CTAAGTTATCCTATTATTGA+GGG + chr3_1:40668453-40668472 Msa0357470:CDS 25.0%
! TAAGTTATCCTATTATTGAG+GGG + chr3_1:40668454-40668473 Msa0357470:CDS 25.0%
!!! TGAGAGGATAATCTTATTTT+TGG + chr3_1:40668591-40668610 Msa0357470:three_prime_UTR 25.0%
TTTAATCAGTCAATGAACGT+TGG - chr3_1:40663276-40663295 None:intergenic 30.0%
CCATTCAAACAAACTTTCAT+TGG - chr3_1:40663326-40663345 None:intergenic 30.0%
! CCAATGAAAGTTTGTTTGAA+TGG + chr3_1:40663323-40663342 Msa0357470:intron 30.0%
GATGTCAATCATACCTTATA+AGG + chr3_1:40663350-40663369 Msa0357470:intron 30.0%
ATCTTGGTTATCCCATAAAA+TGG - chr3_1:40663650-40663669 None:intergenic 30.0%
!!! TATTTTAACATAAGAGGGGA+GGG - chr3_1:40664240-40664259 None:intergenic 30.0%
!!! ATATTTTAACATAAGAGGGG+AGG - chr3_1:40664241-40664260 None:intergenic 30.0%
! GCGTGTTAGCATATTTTATT+AGG - chr3_1:40665028-40665047 None:intergenic 30.0%
TTGTTTGGACTTAAAAGCTT+TGG - chr3_1:40665072-40665091 None:intergenic 30.0%
!!! GAGTTTGCTAGCATTTTTTT+CGG - chr3_1:40665134-40665153 None:intergenic 30.0%
! TTGATTTTTCTTGGTTGTGA+GGG - chr3_1:40665235-40665254 None:intergenic 30.0%
!! TTTGATTTTTCTTGGTTGTG+AGG - chr3_1:40665236-40665255 None:intergenic 30.0%
CTCACGAAAATTGAAAAATG+CGG + chr3_1:40665348-40665367 Msa0357470:intron 30.0%
TTAAGGCAAGATTACATTAG+GGG + chr3_1:40665537-40665556 Msa0357470:intron 30.0%
!! TGTGCTTTTAAGAGAGATAA+AGG - chr3_1:40665625-40665644 None:intergenic 30.0%
GAACATCTTCATCATATTTC+TGG - chr3_1:40666268-40666287 None:intergenic 30.0%
AGAAGATGATGAAGATTCAA+AGG - chr3_1:40665772-40665791 None:intergenic 30.0%
ATTTCATAAATGTTGCAAGG+CGG + chr3_1:40665892-40665911 Msa0357470:intron 30.0%
TCTAACTCAATATTCCAACA+CGG - chr3_1:40666032-40666051 None:intergenic 30.0%
GAACATCTTCATCATATTTC+TGG + chr3_1:40666268-40666287 Msa0357470:intron 30.0%
TGAGAGATAAAAGACCTAAA+CGG + chr3_1:40666388-40666407 Msa0357470:intron 30.0%
AAATACCCTCTAAACAAGAT+AGG + chr3_1:40666618-40666637 Msa0357470:intron 30.0%
AATACCCTCTAAACAAGATA+GGG + chr3_1:40666619-40666638 Msa0357470:intron 30.0%
! ATTACCCTATCTTGTTTAGA+GGG - chr3_1:40666626-40666645 None:intergenic 30.0%
AATATGGGTAATTAAGGATC+AGG + chr3_1:40666677-40666696 Msa0357470:intron 30.0%
! TTAACTTGATTGATATCCAC+AGG + chr3_1:40666884-40666903 Msa0357470:intron 30.0%
! CCTAAGAAACATGGTATTTT+TGG - chr3_1:40666996-40667015 None:intergenic 30.0%
CCAAAAATACCATGTTTCTT+AGG + chr3_1:40666993-40667012 Msa0357470:CDS 30.0%
AAATATAGCCCATTCACTTA+CGG + chr3_1:40667095-40667114 Msa0357470:CDS 30.0%
TGTGTAGGCAATAGTATATT+GGG - chr3_1:40667177-40667196 None:intergenic 30.0%
AATGATTCCATATAGTGTGT+AGG - chr3_1:40667192-40667211 None:intergenic 30.0%
AGGAATTTCTGTATTTCCAA+AGG + chr3_1:40667232-40667251 Msa0357470:CDS 30.0%
!! TTTTAGAGATGCAACTCAAA+AGG - chr3_1:40667521-40667540 None:intergenic 30.0%
GAAACAACTTATGTTACAAG+TGG + chr3_1:40667842-40667861 Msa0357470:intron 30.0%
ACTGTAAACACTATAAACCA+AGG - chr3_1:40668051-40668070 None:intergenic 30.0%
AAGCAGCAAAAAAATGGTTT+GGG + chr3_1:40668199-40668218 Msa0357470:CDS 30.0%
!! CAGGGTAAGTTTAATTTTGA+AGG + chr3_1:40668288-40668307 Msa0357470:CDS 30.0%
ATTATGAGCAACACAATCAA+TGG - chr3_1:40668333-40668352 None:intergenic 30.0%
CTTATAATCCCCTCAATAAT+AGG - chr3_1:40668465-40668484 None:intergenic 30.0%
GATTATAAGTATGAAACGCA+AGG + chr3_1:40668476-40668495 Msa0357470:CDS 30.0%
! TAAGCTTAGATGATTTTGAG+AGG + chr3_1:40668575-40668594 Msa0357470:three_prime_UTR 30.0%
!! CCAGTTTGTGTTACTTTCAT+AGG - chr3_1:40663036-40663055 None:intergenic 35.0%
CCTATGAAAGTAACACAAAC+TGG + chr3_1:40663033-40663052 Msa0357470:CDS 35.0%
! AGATGAGAGGTATGATTGAA+AGG - chr3_1:40663413-40663432 None:intergenic 35.0%
!! TGATTGGTTGATAACAAGAG+AGG - chr3_1:40664087-40664106 None:intergenic 35.0%
!! ATTTTAACATAAGAGGGGAG+GGG - chr3_1:40664239-40664258 None:intergenic 35.0%
!! ATGTTTTTGTTCTCACGTTC+GGG - chr3_1:40664818-40664837 None:intergenic 35.0%
!! GATGTTTTTGTTCTCACGTT+CGG - chr3_1:40664819-40664838 None:intergenic 35.0%
! AATTTGAAACTGCAGCAGTT+TGG - chr3_1:40664936-40664955 None:intergenic 35.0%
! GAGGCTTTTGTTCTTTTGTT+TGG - chr3_1:40665087-40665106 None:intergenic 35.0%
! ATACTTTAAGGATTGCTAGC+AGG - chr3_1:40665179-40665198 None:intergenic 35.0%
ACGGTAATTCTCACGATATT+TGG + chr3_1:40665303-40665322 Msa0357470:intron 35.0%
GAAGCTTCAAAGAAAGAAGA+TGG + chr3_1:40666238-40666257 Msa0357470:intron 35.0%
! TGATTGGTTGATATCATGAG+AGG + chr3_1:40666593-40666612 Msa0357470:intron 35.0%
! GATTGGTTGATATCATGAGA+GGG + chr3_1:40666594-40666613 Msa0357470:intron 35.0%
! GATTACCCTATCTTGTTTAG+AGG - chr3_1:40666627-40666646 None:intergenic 35.0%
AATATAGCCCATTCACTTAC+GGG + chr3_1:40667096-40667115 Msa0357470:CDS 35.0%
TTGAAATCCCGTAAGTGAAT+GGG - chr3_1:40667106-40667125 None:intergenic 35.0%
GTGTGTAGGCAATAGTATAT+TGG - chr3_1:40667178-40667197 None:intergenic 35.0%
ACTATTGCCTACACACTATA+TGG + chr3_1:40667182-40667201 Msa0357470:CDS 35.0%
! ATTGAGGTAATTTCAAGTGG+TGG + chr3_1:40668102-40668121 Msa0357470:CDS 35.0%
GAAGCAGCAAAAAAATGGTT+TGG + chr3_1:40668198-40668217 Msa0357470:CDS 35.0%
!! AAAATGGTTTGGGTTGAACA+AGG + chr3_1:40668209-40668228 Msa0357470:CDS 35.0%
!! AAATGGTTTGGGTTGAACAA+GGG + chr3_1:40668210-40668229 Msa0357470:CDS 35.0%
CAAAGCAGTTGACAAAGATA+AGG + chr3_1:40668251-40668270 Msa0357470:CDS 35.0%
TAAGGTAAAGCAATATGAGC+AGG + chr3_1:40668269-40668288 Msa0357470:CDS 35.0%
AAGGTAAAGCAATATGAGCA+GGG + chr3_1:40668270-40668289 Msa0357470:CDS 35.0%
AACATTGTTTGCTTCTTTGG+TGG + chr3_1:40668354-40668373 Msa0357470:CDS 35.0%
! TTTGCTTCTTTGGTGGTTTA+TGG + chr3_1:40668361-40668380 Msa0357470:CDS 35.0%
GATAGCTAACGAGAAAAAGT+TGG - chr3_1:40668425-40668444 None:intergenic 35.0%
ATAAGTATGAAACGCAAGGT+TGG + chr3_1:40668480-40668499 Msa0357470:CDS 35.0%
TAAGTATGAAACGCAAGGTT+GGG + chr3_1:40668481-40668500 Msa0357470:CDS 35.0%
! ACGTACTCATATGCTTTTCA+TGG - chr3_1:40668522-40668541 None:intergenic 35.0%
GAGTCACTGAAAGCAATATG+TGG + chr3_1:40662939-40662958 Msa0357470:CDS 40.0%
TTTACAAGAAGCGAGTGTAG+TGG + chr3_1:40663001-40663020 Msa0357470:CDS 40.0%
!! TAACACAAACTGGAGTACTG+AGG + chr3_1:40663043-40663062 Msa0357470:CDS 40.0%
! TACGTTACCCTCTCTTGTTT+AGG + chr3_1:40664051-40664070 Msa0357470:intron 40.0%
! ACGTTACCCTCTCTTGTTTA+GGG + chr3_1:40664052-40664071 Msa0357470:intron 40.0%
TTCAAGCATCTTATAGGGAG+AGG - chr3_1:40664298-40664317 None:intergenic 40.0%
!! TGTTTTTGTTCTCACGTTCG+GGG - chr3_1:40664817-40664836 None:intergenic 40.0%
! AAAAGCTTTGGCTGATAGTG+AGG - chr3_1:40665060-40665079 None:intergenic 40.0%
GCTGAAATGGTTATGTCATG+AGG - chr3_1:40665106-40665125 None:intergenic 40.0%
!! TTTTTCGGTTGCTGCTGAAA+TGG - chr3_1:40665119-40665138 None:intergenic 40.0%
AAACTCCCAAAACATCACAG+CGG + chr3_1:40665148-40665167 Msa0357470:intron 40.0%
!! TGACGTGGTTCTGGAAATAA+CGG + chr3_1:40665284-40665303 Msa0357470:intron 40.0%
! TGCAAAGCTGCTCTCAATTT+TGG + chr3_1:40665993-40666012 Msa0357470:intron 40.0%
! GCAAAGCTGCTCTCAATTTT+GGG + chr3_1:40665994-40666013 Msa0357470:intron 40.0%
! CAAAGCTGCTCTCAATTTTG+GGG + chr3_1:40665995-40666014 Msa0357470:intron 40.0%
!!! GGGTTATTTTTATGCCGTGT+TGG + chr3_1:40666015-40666034 Msa0357470:intron 40.0%
CAATGGACGACTTAAGTGAT+TGG + chr3_1:40666802-40666821 Msa0357470:intron 40.0%
GACGACTTAAGTGATTGGAA+TGG + chr3_1:40666807-40666826 Msa0357470:intron 40.0%
ACTTGATTGATATCCACAGG+TGG + chr3_1:40666887-40666906 Msa0357470:intron 40.0%
CTTGATTGATATCCACAGGT+GGG + chr3_1:40666888-40666907 Msa0357470:intron 40.0%
!! AAACTTGAGAGTACCGTTAC+TGG + chr3_1:40666927-40666946 Msa0357470:CDS 40.0%
AATCCCTCTTTCATGTCAGT+GGG - chr3_1:40667026-40667045 None:intergenic 40.0%
!! GATTGCTTCAGTTGGTAAAG+TGG + chr3_1:40667042-40667061 Msa0357470:CDS 40.0%
ACATCTGAACTTCTCTTGCT+TGG + chr3_1:40667065-40667084 Msa0357470:CDS 40.0%
CTTGAAATCCCGTAAGTGAA+TGG - chr3_1:40667107-40667126 None:intergenic 40.0%
TGTGGTTGTGAAGTAGCAAA+AGG - chr3_1:40667153-40667172 None:intergenic 40.0%
! GGCAATAGTATATTGGGTTG+TGG - chr3_1:40667171-40667190 None:intergenic 40.0%
CCTTTCAAGAAGCAAATCTG+AGG - chr3_1:40667215-40667234 None:intergenic 40.0%
! CCTCAGATTTGCTTCTTGAA+AGG + chr3_1:40667212-40667231 Msa0357470:CDS 40.0%
TGTTACAGGTTACAGAACCT+TGG + chr3_1:40668031-40668050 Msa0357470:intron 40.0%
TTGTTCATCCCACCAAATTC+TGG - chr3_1:40668133-40668152 None:intergenic 40.0%
! TGAAGGTGCAACATTGTTCA+TGG + chr3_1:40668305-40668324 Msa0357470:CDS 40.0%
ATGGAGACTACTCAATGTGA+AGG + chr3_1:40668380-40668399 Msa0357470:CDS 40.0%
! CGTTACCCTCTCTTGTTTAG+GGG + chr3_1:40664053-40664072 Msa0357470:intron 45.0%
! GTTACCCTCTCTTGTTTAGG+GGG + chr3_1:40664054-40664073 Msa0357470:intron 45.0%
ACTACCCCCTAAACAAGAGA+GGG - chr3_1:40664061-40664080 None:intergenic 45.0%
AACTACCCCCTAAACAAGAG+AGG - chr3_1:40664062-40664081 None:intergenic 45.0%
AAAAGTCACGATACCTGACG+CGG - chr3_1:40664987-40665006 None:intergenic 45.0%
! TGTTGCCGCTGTGATGTTTT+GGG - chr3_1:40665156-40665175 None:intergenic 45.0%
! GTTATTTCCAGAACCACGTC+AGG - chr3_1:40665285-40665304 None:intergenic 45.0%
CATAAATGTTGCAAGGCGGA+TGG + chr3_1:40665896-40665915 Msa0357470:intron 45.0%
AAAGTCAGGCAAAGGAGATC+TGG - chr3_1:40666764-40666783 None:intergenic 45.0%
ACACACTCAAAGTCAGGCAA+AGG - chr3_1:40666772-40666791 None:intergenic 45.0%
TACCTCACACACTCAAAGTC+AGG - chr3_1:40666778-40666797 None:intergenic 45.0%
AGTGTGTGAGGTAAACGCAA+TGG + chr3_1:40666785-40666804 Msa0357470:intron 45.0%
ATGAAGGAGGTAGCCAGTAA+CGG - chr3_1:40666943-40666962 None:intergenic 45.0%
GGTGCACATCCTAAGAAACA+TGG - chr3_1:40667005-40667024 None:intergenic 45.0%
CAATCCCTCTTTCATGTCAG+TGG - chr3_1:40667027-40667046 None:intergenic 45.0%
GAAAGAGGGATTGCTTCAGT+TGG + chr3_1:40667034-40667053 Msa0357470:CDS 45.0%
TTCATCCCACCAAATTCTGG+AGG - chr3_1:40668130-40668149 None:intergenic 45.0%
!! TAAAATATTAAATAAGTTAA+AGG - chr3_1:40663132-40663151 None:intergenic 5.0%
!!! ATTATTGTAATTTTATTTTT+TGG + chr3_1:40664541-40664560 Msa0357470:intron 5.0%
!! TAGAAAATAATAATAATATA+CGG + chr3_1:40666048-40666067 Msa0357470:intron 5.0%
!!! TATTAAAAAAAAACAATTTT+AGG - chr3_1:40666519-40666538 None:intergenic 5.0%
TCTCTCTCTCTCTCTCTCTC+TGG - chr3_1:40663704-40663723 None:intergenic 50.0%
!! GTTGTTTCTAGAACCGCGTC+AGG + chr3_1:40664971-40664990 Msa0357470:intron 50.0%
! GTGTTGCCGCTGTGATGTTT+TGG - chr3_1:40665157-40665176 None:intergenic 50.0%
TCAACTCACCATACCTGACG+TGG + chr3_1:40665269-40665288 Msa0357470:intron 50.0%
TTCCAGAACCACGTCAGGTA+TGG - chr3_1:40665280-40665299 None:intergenic 50.0%
AAATGTTGCAAGGCGGATGG+TGG + chr3_1:40665899-40665918 Msa0357470:intron 50.0%
AGGCTTAGTCACTAGCGGAA+GGG + chr3_1:40665922-40665941 Msa0357470:intron 50.0%
TAGTCACTAGCGGAAGGGTT+AGG + chr3_1:40665927-40665946 Msa0357470:intron 50.0%
AGGATCAGGATTCTCTCTCG+TGG + chr3_1:40666691-40666710 Msa0357470:intron 50.0%
TGGATGGTCCACATTCACAC+GGG - chr3_1:40666744-40666763 None:intergenic 50.0%
CTGGATGGTCCACATTCACA+CGG - chr3_1:40666745-40666764 None:intergenic 50.0%
TCAGGCAAAGGAGATCTGGA+TGG - chr3_1:40666760-40666779 None:intergenic 50.0%
TGCCTGACTTTGAGTGTGTG+AGG + chr3_1:40666773-40666792 Msa0357470:intron 50.0%
GCATAAGAGAATCCCACCTG+TGG - chr3_1:40666903-40666922 None:intergenic 50.0%
ACCTCCTTCATTGCAGAGGA+TGG + chr3_1:40666952-40666971 Msa0357470:CDS 50.0%
TCCATCCTCTGCAATGAAGG+AGG - chr3_1:40666956-40666975 None:intergenic 50.0%
TCCTTCATTGCAGAGGATGG+AGG + chr3_1:40666955-40666974 Msa0357470:CDS 50.0%
ACCTCCATCCTCTGCAATGA+AGG - chr3_1:40666959-40666978 None:intergenic 50.0%
TGCACCCACTGACATGAAAG+AGG + chr3_1:40667019-40667038 Msa0357470:CDS 50.0%
GCACCCACTGACATGAAAGA+GGG + chr3_1:40667020-40667039 Msa0357470:CDS 50.0%
TGGCTCCTCCAGAATTTGGT+GGG + chr3_1:40668122-40668141 Msa0357470:CDS 50.0%
TCACGTTCGGGGTTGTGGAA+TGG - chr3_1:40664806-40664825 None:intergenic 55.0%
TGTTCTCACGTTCGGGGTTG+TGG - chr3_1:40664811-40664830 None:intergenic 55.0%
! GCTTTGGCTGATAGTGAGGC+AGG - chr3_1:40665056-40665075 None:intergenic 55.0%
CACCATACCTGACGTGGTTC+TGG + chr3_1:40665275-40665294 Msa0357470:intron 55.0%
GGTGGAGGCTTAGTCACTAG+CGG + chr3_1:40665917-40665936 Msa0357470:intron 55.0%
GAGGCTTAGTCACTAGCGGA+AGG + chr3_1:40665921-40665940 Msa0357470:intron 55.0%
CTCTCTCGTGGCAATCTCAC+TGG + chr3_1:40666703-40666722 Msa0357470:intron 55.0%
TCCACATTCACACGGGAGTC+GGG - chr3_1:40666737-40666756 None:intergenic 55.0%
GTCCACATTCACACGGGAGT+CGG - chr3_1:40666738-40666757 None:intergenic 55.0%
GGCTACCTCCTTCATTGCAG+AGG + chr3_1:40666948-40666967 Msa0357470:CDS 55.0%
GTGGTGGCTCCTCCAGAATT+TGG + chr3_1:40668118-40668137 Msa0357470:CDS 55.0%
GTGGCTCCTCCAGAATTTGG+TGG + chr3_1:40668121-40668140 Msa0357470:CDS 55.0%
! TGTTGCAAGGCGGATGGTGG+AGG + chr3_1:40665902-40665921 Msa0357470:intron 60.0%
CACATTCACACGGGAGTCGG+GGG - chr3_1:40666735-40666754 None:intergenic 60.0%
CCACATTCACACGGGAGTCG+GGG - chr3_1:40666736-40666755 None:intergenic 60.0%
CCCCGACTCCCGTGTGAATG+TGG + chr3_1:40666733-40666752 Msa0357470:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 40662930 40668638 40662930 ID=Msa0357470;Name=Msa0357470
chr3_1 mRNA 40662930 40668638 40662930 ID=Msa0357470-mRNA-1;Parent=Msa0357470;Name=Msa0357470-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.5|0.33|1|1|1|3|132|316
chr3_1 exon 40662930 40663064 40662930 ID=Msa0357470-mRNA-1:exon:7080;Parent=Msa0357470-mRNA-1
chr3_1 exon 40666906 40667253 40666906 ID=Msa0357470-mRNA-1:exon:7081;Parent=Msa0357470-mRNA-1
chr3_1 exon 40668039 40668638 40668039 ID=Msa0357470-mRNA-1:exon:7082;Parent=Msa0357470-mRNA-1
chr3_1 CDS 40662930 40663064 40662930 ID=Msa0357470-mRNA-1:cds;Parent=Msa0357470-mRNA-1
chr3_1 CDS 40666906 40667253 40666906 ID=Msa0357470-mRNA-1:cds;Parent=Msa0357470-mRNA-1
chr3_1 CDS 40668039 40668506 40668039 ID=Msa0357470-mRNA-1:cds;Parent=Msa0357470-mRNA-1
chr3_1 three_prime_UTR 40668507 40668638 40668507 ID=Msa0357470-mRNA-1:three_prime_utr;Parent=Msa0357470-mRNA-1
Gene Sequence

>Msa0357470

ATGTATGTAGAGTCACTGAAAGCAATATGTGGTCAACAAACTACTAATCAAAATGCTTCAAGACATGTAGTTTTACAAGAAGCGAGTGTAGTGGCTTCTTGTTCCTATGAAAGTAACACAAACTGGAGTACTGAGGTGGGATTCTCTTATGCTATAAAACTTGAGAGTACCGTTACTGGCTACCTCCTTCATTGCAGAGGATGGAGGTCAACCTATCTTTATCCAAAAATACCATGTTTCTTAGGATGTGCACCCACTGACATGAAAGAGGGATTGCTTCAGTTGGTAAAGTGGACATCTGAACTTCTCTTGCTTGGAATCTCTAAATATAGCCCATTCACTTACGGGATTTCAAGATTGCCCATTATTCATTGTCTAACCTTTTGCTACTTCACAACCACAACCCAATATACTATTGCCTACACACTATATGGAATCATTCCTCAGATTTGCTTCTTGAAAGGAATTTCTGTATTTCCAAAGGTTACAGAACCTTGGTTTATAGTGTTTACAGTATTATATGTATCCACTCAAATTCAACATTATATTGAGGTAATTTCAAGTGGTGGCTCCTCCAGAATTTGGTGGGATGAACAAAGAAGTTTGATTGTAAAATCAATTGGATGTTTTTTTGCAATTATAGAAGCAGCAAAAAAATGGTTTGGGTTGAACAAGGGAAAATTCAATTTATCAAGCAAAGCAGTTGACAAAGATAAGGTAAAGCAATATGAGCAGGGTAAGTTTAATTTTGAAGGTGCAACATTGTTCATGGCACCATTGATTGTGTTGCTCATAATAAACATTGTTTGCTTCTTTGGTGGTTTATGGAGACTACTCAATGTGAAGGATTTTAATGAAATGTTTGGCCAACTTTTTCTCGTTAGCTATCTAATAGCTCTAAGTTATCCTATTATTGAGGGGATTATAAGTATGAAACGCAAGGTTGGGTAG

Protein sequence

>Msa0357470

MYVESLKAICGQQTTNQNASRHVVLQEASVVASCSYESNTNWSTEVGFSYAIKLESTVTGYLLHCRGWRSTYLYPKIPCFLGCAPTDMKEGLLQLVKWTSELLLLGISKYSPFTYGISRLPIIHCLTFCYFTTTTQYTIAYTLYGIIPQICFLKGISVFPKVTEPWFIVFTVLYVSTQIQHYIEVISSGGSSRIWWDEQRSLIVKSIGCFFAIIEAAKKWFGLNKGKFNLSSKAVDKDKVKQYEQGKFNFEGATLFMAPLIVLLIINIVCFFGGLWRLLNVKDFNEMFGQLFLVSYLIALSYPIIEGIISMKRKVG*