Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0622890 | XP_003597042.1 | 89.695 | 262 | 6 | 2 | 1 | 243 | 1 | 260 | 4.37e-161 | 456 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0622890 | sp|Q9FH37|ILR3_ARATH | 55.612 | 196 | 76 | 5 | 59 | 243 | 39 | 234 | 9.32e-65 | 204 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|---|---|
Msa0622890 | TF | bHLH |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004900 | Msa0622890 | 0.811121 | 8.203320e-51 | -8.615850e-47 |
Msa0004990 | Msa0622890 | 0.813749 | 2.186053e-51 | -8.615850e-47 |
Msa0011010 | Msa0622890 | 0.801759 | 7.738188e-49 | -8.615850e-47 |
Msa0012800 | Msa0622890 | 0.810965 | 8.867468e-51 | -8.615850e-47 |
Msa0021870 | Msa0622890 | 0.854028 | 1.616187e-61 | -8.615850e-47 |
Msa0024650 | Msa0622890 | 0.838843 | 2.260017e-57 | -8.615850e-47 |
Msa0025560 | Msa0622890 | 0.805473 | 1.312218e-49 | -8.615850e-47 |
Msa0031650 | Msa0622890 | 0.843712 | 1.183977e-58 | -8.615850e-47 |
Msa0036260 | Msa0622890 | 0.806441 | 8.212400e-50 | -8.615850e-47 |
Msa0036550 | Msa0622890 | 0.809522 | 1.815427e-50 | -8.615850e-47 |
Msa0038010 | Msa0622890 | 0.846542 | 2.035083e-59 | -8.615850e-47 |
Msa0048380 | Msa0622890 | 0.816601 | 5.083636e-52 | -8.615850e-47 |
Msa0053040 | Msa0622890 | 0.816616 | 5.044985e-52 | -8.615850e-47 |
Msa0070580 | Msa0622890 | -0.808605 | 2.852805e-50 | -8.615850e-47 |
Msa0078160 | Msa0622890 | -0.819285 | 1.258357e-52 | -8.615850e-47 |
Msa0078170 | Msa0622890 | -0.811459 | 6.926524e-51 | -8.615850e-47 |
Msa0080010 | Msa0622890 | 0.822721 | 2.035612e-53 | -8.615850e-47 |
Msa0084190 | Msa0622890 | 0.837763 | 4.289703e-57 | -8.615850e-47 |
Msa0085710 | Msa0622890 | 0.826574 | 2.518106e-54 | -8.615850e-47 |
Msa0093530 | Msa0622890 | 0.812333 | 4.468762e-51 | -8.615850e-47 |
Msa0098380 | Msa0622890 | 0.831359 | 1.745773e-55 | -8.615850e-47 |
Msa0100200 | Msa0622890 | 0.813965 | 1.959339e-51 | -8.615850e-47 |
Msa0117650 | Msa0622890 | 0.821817 | 3.300667e-53 | -8.615850e-47 |
Msa0120450 | Msa0622890 | 0.811719 | 6.081229e-51 | -8.615850e-47 |
Msa0604280 | Msa0622890 | 0.833407 | 5.428548e-56 | -8.615850e-47 |
Msa0614960 | Msa0622890 | 0.803429 | 3.500373e-49 | -8.615850e-47 |
Msa0619450 | Msa0622890 | -0.810169 | 1.317686e-50 | -8.615850e-47 |
Msa0619530 | Msa0622890 | -0.814001 | 1.924103e-51 | -8.615850e-47 |
Msa0622890 | Msa0624260 | -0.813687 | 2.255991e-51 | -8.615850e-47 |
Msa0622890 | Msa0624360 | -0.812897 | 3.363451e-51 | -8.615850e-47 |
Msa0622890 | Msa0628200 | 0.816281 | 5.994755e-52 | -8.615850e-47 |
Msa0622890 | Msa0637700 | 0.825579 | 4.341381e-54 | -8.615850e-47 |
Msa0622890 | Msa0638300 | -0.800584 | 1.345459e-48 | -8.615850e-47 |
Msa0622890 | Msa0643230 | 0.829436 | 5.152802e-55 | -8.615850e-47 |
Msa0622890 | Msa0644340 | 0.814682 | 1.360755e-51 | -8.615850e-47 |
Msa0622890 | Msa0647300 | 0.807110 | 5.932741e-50 | -8.615850e-47 |
Msa0622890 | Msa0651090 | 0.808855 | 2.522127e-50 | -8.615850e-47 |
Msa0622890 | Msa0652590 | 0.815367 | 9.584467e-52 | -8.615850e-47 |
Msa0622890 | Msa0655370 | 0.847688 | 9.872014e-60 | -8.615850e-47 |
Msa0622890 | Msa0658150 | 0.811292 | 7.531760e-51 | -8.615850e-47 |
Msa0622890 | Msa0659580 | -0.810821 | 9.526156e-51 | -8.615850e-47 |
Msa0622890 | Msa0662230 | -0.807466 | 4.984777e-50 | -8.615850e-47 |
Msa0622890 | Msa0667840 | -0.812689 | 3.736565e-51 | -8.615850e-47 |
Msa0622890 | Msa0677250 | -0.806809 | 6.868628e-50 | -8.615850e-47 |
Msa0622890 | Msa0679220 | 0.811661 | 6.261391e-51 | -8.615850e-47 |
Msa0622890 | Msa0680460 | 0.819005 | 1.457512e-52 | -8.615850e-47 |
Msa0622890 | Msa0682910 | 0.809220 | 2.107325e-50 | -8.615850e-47 |
Msa0622890 | Msa0685390 | -0.803075 | 4.144296e-49 | -8.615850e-47 |
Msa0622890 | Msa0686830 | 0.807881 | 4.069820e-50 | -8.615850e-47 |
Msa0622890 | Msa0689840 | 0.819690 | 1.017422e-52 | -8.615850e-47 |
Msa0622890 | Msa0699170 | 0.810335 | 1.213145e-50 | -8.615850e-47 |
Msa0622890 | Msa0703000 | 0.807177 | 5.740749e-50 | -8.615850e-47 |
Msa0622890 | Msa0711240 | 0.809616 | 1.732350e-50 | -8.615850e-47 |
Msa0622890 | Msa0714230 | -0.831766 | 1.385638e-55 | -8.615850e-47 |
Msa0622890 | Msa0716980 | 0.843391 | 1.442576e-58 | -8.615850e-47 |
Msa0622890 | Msa0717030 | 0.854313 | 1.338086e-61 | -8.615850e-47 |
Msa0622890 | Msa0719330 | -0.803994 | 2.672023e-49 | -8.615850e-47 |
Msa0622890 | Msa0722730 | 0.828532 | 8.532544e-55 | -8.615850e-47 |
Msa0622890 | Msa0730890 | 0.828735 | 7.619967e-55 | -8.615850e-47 |
Msa0622890 | Msa0734700 | 0.803283 | 3.753196e-49 | -8.615850e-47 |
Msa0622890 | Msa0743370 | 0.829523 | 4.907713e-55 | -8.615850e-47 |
Msa0622890 | Msa0747710 | 0.813959 | 1.965482e-51 | -8.615850e-47 |
Msa0622890 | Msa0750790 | 0.819901 | 9.106437e-53 | -8.615850e-47 |
Msa0622890 | Msa0750830 | 0.846752 | 1.782295e-59 | -8.615850e-47 |
Msa0622890 | Msa0756570 | 0.803761 | 2.988170e-49 | -8.615850e-47 |
Msa0622890 | Msa0758150 | 0.821761 | 3.400126e-53 | -8.615850e-47 |
Msa0622890 | Msa0766910 | -0.805354 | 1.390321e-49 | -8.615850e-47 |
Msa0622890 | Msa0773030 | 0.825018 | 5.892593e-54 | -8.615850e-47 |
Msa0622890 | Msa0776340 | 0.802170 | 6.371615e-49 | -8.615850e-47 |
Msa0622890 | Msa0777600 | 0.820280 | 7.455076e-53 | -8.615850e-47 |
Msa0622890 | Msa0784780 | -0.802127 | 6.502539e-49 | -8.615850e-47 |
Msa0622890 | Msa0792410 | 0.819405 | 1.181552e-52 | -8.615850e-47 |
Msa0622890 | Msa0795910 | -0.801327 | 9.487765e-49 | -8.615850e-47 |
Msa0622890 | Msa0798840 | 0.805854 | 1.091616e-49 | -8.615850e-47 |
Msa0622890 | Msa0799150 | -0.824355 | 8.444407e-54 | -8.615850e-47 |
Msa0622890 | Msa0800120 | 0.810849 | 9.392126e-51 | -8.615850e-47 |
Msa0622890 | Msa0800150 | 0.820357 | 7.157962e-53 | -8.615850e-47 |
Msa0622890 | Msa0812720 | 0.818177 | 2.245428e-52 | -8.615850e-47 |
Msa0622890 | Msa0813610 | 0.800809 | 1.210518e-48 | -8.615850e-47 |
Msa0622890 | Msa0813840 | 0.802353 | 5.841765e-49 | -8.615850e-47 |
Msa0622890 | Msa0814660 | 0.837053 | 6.522061e-57 | -8.615850e-47 |
Msa0622890 | Msa0817100 | 0.831211 | 1.898155e-55 | -8.615850e-47 |
Msa0622890 | Msa0817690 | 0.820978 | 5.154794e-53 | -8.615850e-47 |
Msa0622890 | Msa0831310 | 0.803545 | 3.312180e-49 | -8.615850e-47 |
Msa0622890 | Msa0833360 | -0.802844 | 4.626533e-49 | -8.615850e-47 |
Msa0622890 | Msa0838210 | 0.814664 | 1.372865e-51 | -8.615850e-47 |
Msa0622890 | Msa0840540 | 0.813757 | 2.177556e-51 | -8.615850e-47 |
Msa0622890 | Msa0846870 | 0.825448 | 4.663259e-54 | -8.615850e-47 |
Msa0622890 | Msa0847140 | 0.809412 | 1.916692e-50 | -8.615850e-47 |
Msa0622890 | Msa0853080 | 0.801127 | 1.042715e-48 | -8.615850e-47 |
Msa0622890 | Msa0854230 | 0.820170 | 7.899783e-53 | -8.615850e-47 |
Msa0622890 | Msa0854380 | 0.815835 | 7.542676e-52 | -8.615850e-47 |
Msa0622890 | Msa0855260 | 0.833072 | 6.577820e-56 | -8.615850e-47 |
Msa0622890 | Msa0874750 | 0.808957 | 2.399537e-50 | -8.615850e-47 |
Msa0622890 | Msa0890210 | 0.828299 | 9.709251e-55 | -8.615850e-47 |
Msa0622890 | Msa0896920 | 0.832597 | 8.632370e-56 | -8.615850e-47 |
Msa0622890 | Msa0904590 | 0.801507 | 8.714363e-49 | -8.615850e-47 |
Msa0622890 | Msa0910560 | 0.805874 | 1.081394e-49 | -8.615850e-47 |
Msa0622890 | Msa0910590 | 0.833097 | 6.485439e-56 | -8.615850e-47 |
Msa0622890 | Msa0913500 | 0.844561 | 7.005409e-59 | -8.615850e-47 |
Msa0622890 | Msa0925940 | 0.805338 | 1.401168e-49 | -8.615850e-47 |
Msa0622890 | Msa0931370 | 0.801901 | 7.234875e-49 | -8.615850e-47 |
Msa0622890 | Msa0937160 | -0.818852 | 1.579048e-52 | -8.615850e-47 |
Msa0622890 | Msa0948430 | 0.825325 | 4.984077e-54 | -8.615850e-47 |
Msa0622890 | Msa0950090 | 0.839107 | 1.931341e-57 | -8.615850e-47 |
Msa0622890 | Msa0973850 | 0.824515 | 7.743220e-54 | -8.615850e-47 |
Msa0622890 | Msa0974410 | -0.809079 | 2.258625e-50 | -8.615850e-47 |
Msa0622890 | Msa0985380 | 0.802243 | 6.153266e-49 | -8.615850e-47 |
Msa0622890 | Msa0985980 | -0.800353 | 1.499957e-48 | -8.615850e-47 |
Msa0622890 | Msa0987020 | 0.814902 | 1.215853e-51 | -8.615850e-47 |
Msa0622890 | Msa1003120 | 0.819478 | 1.137309e-52 | -8.615850e-47 |
Msa0622890 | Msa1006030 | 0.811620 | 6.390340e-51 | -8.615850e-47 |
Msa0622890 | Msa1007900 | 0.826543 | 2.561505e-54 | -8.615850e-47 |
Msa0622890 | Msa1007930 | 0.815206 | 1.040994e-51 | -8.615850e-47 |
Msa0622890 | Msa1019420 | 0.809558 | 1.782933e-50 | -8.615850e-47 |
Msa0622890 | Msa1024480 | 0.822863 | 1.886594e-53 | -8.615850e-47 |
Msa0622890 | Msa1029860 | 0.810611 | 1.057384e-50 | -8.615850e-47 |
Msa0622890 | Msa1031060 | 0.851602 | 7.975104e-61 | -8.615850e-47 |
Msa0622890 | Msa1034690 | 0.818678 | 1.729453e-52 | -8.615850e-47 |
Msa0622890 | Msa1035050 | 0.800790 | 1.221473e-48 | -8.615850e-47 |
Msa0622890 | Msa1036590 | 0.834065 | 3.716597e-56 | -8.615850e-47 |
Msa0622890 | Msa1040330 | 0.835447 | 1.669067e-56 | -8.615850e-47 |
Msa0622890 | Msa1042300 | 0.807835 | 4.161811e-50 | -8.615850e-47 |
Msa0622890 | Msa1044050 | -0.805173 | 1.516778e-49 | -8.615850e-47 |
Msa0622890 | Msa1047300 | 0.808918 | 2.445278e-50 | -8.615850e-47 |
Msa0622890 | Msa1047340 | 0.809261 | 2.065295e-50 | -8.615850e-47 |
Msa0622890 | Msa1049400 | 0.816702 | 4.827013e-52 | -8.615850e-47 |
Msa0622890 | Msa1062290 | 0.841258 | 5.300144e-58 | -8.615850e-47 |
Msa0622890 | Msa1063260 | 0.809377 | 1.949663e-50 | -8.615850e-47 |
Msa0622890 | Msa1075030 | 0.802729 | 4.885076e-49 | -8.615850e-47 |
Msa0622890 | Msa1075090 | 0.805256 | 1.457719e-49 | -8.615850e-47 |
Msa0622890 | Msa1076900 | 0.833681 | 4.638844e-56 | -8.615850e-47 |
Msa0622890 | Msa1078300 | 0.802030 | 6.806568e-49 | -8.615850e-47 |
Msa0622890 | Msa1084800 | 0.813632 | 2.320322e-51 | -8.615850e-47 |
Msa0622890 | Msa1085560 | 0.814652 | 1.381462e-51 | -8.615850e-47 |
Msa0622890 | Msa1085820 | 0.841395 | 4.878539e-58 | -8.615850e-47 |
Msa0622890 | Msa1087200 | 0.803069 | 4.157129e-49 | -8.615850e-47 |
Msa0622890 | Msa1090990 | 0.830530 | 2.787815e-55 | -8.615850e-47 |
Msa0622890 | Msa1099640 | 0.804730 | 1.877560e-49 | -8.615850e-47 |
Msa0622890 | Msa1099650 | 0.831102 | 2.018474e-55 | -8.615850e-47 |
Msa0622890 | Msa1100330 | 0.807345 | 5.288438e-50 | -8.615850e-47 |
Msa0622890 | Msa1103450 | 0.828531 | 8.538902e-55 | -8.615850e-47 |
Msa0622890 | Msa1107220 | 0.822537 | 2.246967e-53 | -8.615850e-47 |
Msa0622890 | Msa1107520 | 0.842357 | 2.716934e-58 | -8.615850e-47 |
Msa0622890 | Msa1109540 | 0.803817 | 2.908099e-49 | -8.615850e-47 |
Msa0622890 | Msa1111910 | 0.821006 | 5.077867e-53 | -8.615850e-47 |
Msa0622890 | Msa1115900 | 0.826251 | 3.004999e-54 | -8.615850e-47 |
Msa0622890 | Msa1119670 | 0.856529 | 3.025363e-62 | -8.615850e-47 |
Msa0622890 | Msa1124220 | 0.809925 | 1.487138e-50 | -8.615850e-47 |
Msa0622890 | Msa1127940 | 0.805497 | 1.297539e-49 | -8.615850e-47 |
Msa0622890 | Msa1128850 | -0.803283 | 3.754149e-49 | -8.615850e-47 |
Msa0622890 | Msa1131070 | 0.806195 | 9.255254e-50 | -8.615850e-47 |
Msa0622890 | Msa1131300 | -0.804722 | 1.884592e-49 | -8.615850e-47 |
Msa0622890 | Msa1132880 | -0.801314 | 9.546007e-49 | -8.615850e-47 |
Msa0622890 | Msa1133850 | 0.825151 | 5.480335e-54 | -8.615850e-47 |
Msa0622890 | Msa1136630 | 0.838916 | 2.163952e-57 | -8.615850e-47 |
Msa0622890 | Msa1136690 | 0.831709 | 1.431662e-55 | -8.615850e-47 |
Msa0622890 | Msa1143250 | 0.805091 | 1.577951e-49 | -8.615850e-47 |
Msa0622890 | Msa1160540 | 0.839470 | 1.554245e-57 | -8.615850e-47 |
Msa0622890 | Msa1162370 | 0.811417 | 7.075849e-51 | -8.615850e-47 |
Msa0622890 | Msa1163710 | 0.813576 | 2.387327e-51 | -8.615850e-47 |
Msa0622890 | Msa1165860 | 0.817434 | 3.305188e-52 | -8.615850e-47 |
Msa0622890 | Msa1185270 | 0.802111 | 6.549518e-49 | -8.615850e-47 |
Msa0622890 | Msa1187750 | 0.813770 | 2.163344e-51 | -8.615850e-47 |
Msa0622890 | Msa1190300 | -0.809352 | 1.973940e-50 | -8.615850e-47 |
Msa0622890 | Msa1191270 | 0.859756 | 3.318018e-63 | -8.615850e-47 |
Msa0622890 | Msa1191530 | -0.801166 | 1.023595e-48 | -8.615850e-47 |
Msa0622890 | Msa1205120 | 0.819010 | 1.453677e-52 | -8.615850e-47 |
Msa0622890 | Msa1206330 | 0.815444 | 9.214892e-52 | -8.615850e-47 |
Msa0622890 | Msa1206380 | 0.816529 | 5.276510e-52 | -8.615850e-47 |
Msa0622890 | Msa1211160 | 0.840743 | 7.235660e-58 | -8.615850e-47 |
Msa0622890 | Msa1211320 | 0.870437 | 1.460631e-66 | -8.615850e-47 |
Msa0622890 | Msa1216370 | 0.804035 | 2.619959e-49 | -8.615850e-47 |
Msa0622890 | Msa1223540 | 0.817855 | 2.655631e-52 | -8.615850e-47 |
Msa0622890 | Msa1223620 | 0.812917 | 3.330200e-51 | -8.615850e-47 |
Msa0622890 | Msa1223710 | 0.827459 | 1.546650e-54 | -8.615850e-47 |
Msa0622890 | Msa1223990 | 0.809056 | 2.285373e-50 | -8.615850e-47 |
Msa0622890 | Msa1231440 | 0.812861 | 3.425455e-51 | -8.615850e-47 |
Msa0622890 | Msa1233620 | 0.807314 | 5.369196e-50 | -8.615850e-47 |
Msa0622890 | Msa1239190 | 0.802864 | 4.582394e-49 | -8.615850e-47 |
Msa0622890 | Msa1241960 | 0.802279 | 6.049266e-49 | -8.615850e-47 |
Msa0622890 | Msa1255710 | 0.800202 | 1.609911e-48 | -8.615850e-47 |
Msa0622890 | Msa1259570 | 0.877902 | 4.327616e-69 | -8.615850e-47 |
Msa0622890 | Msa1263110 | 0.809795 | 1.585611e-50 | -8.615850e-47 |
Msa0622890 | Msa1263370 | 0.817175 | 3.779245e-52 | -8.615850e-47 |
Msa0622890 | Msa1263520 | 0.828245 | 1.000814e-54 | -8.615850e-47 |
Msa0622890 | Msa1265570 | 0.810310 | 1.228075e-50 | -8.615850e-47 |
Msa0622890 | Msa1268360 | 0.819332 | 1.227558e-52 | -8.615850e-47 |
Msa0622890 | Msa1269200 | 0.815856 | 7.460361e-52 | -8.615850e-47 |
Msa0622890 | Msa1269500 | 0.826461 | 2.679335e-54 | -8.615850e-47 |
Msa0622890 | Msa1273320 | 0.833672 | 4.662989e-56 | -8.615850e-47 |
Msa0622890 | Msa1278000 | 0.803353 | 3.630335e-49 | -8.615850e-47 |
Msa0622890 | Msa1281780 | 0.806206 | 9.206213e-50 | -8.615850e-47 |
Msa0622890 | Msa1295210 | -0.802125 | 6.505870e-49 | -8.615850e-47 |
Msa0622890 | Msa1299310 | 0.814282 | 1.668323e-51 | -8.615850e-47 |
Msa0622890 | Msa1300570 | 0.807845 | 4.142553e-50 | -8.615850e-47 |
Msa0622890 | Msa1302630 | 0.814015 | 1.910252e-51 | -8.615850e-47 |
Msa0622890 | Msa1314020 | 0.805100 | 1.571173e-49 | -8.615850e-47 |
Msa0622890 | Msa1320160 | 0.808104 | 3.649156e-50 | -8.615850e-47 |
Msa0622890 | Msa1321010 | 0.814134 | 1.798008e-51 | -8.615850e-47 |
Msa0622890 | Msa1322380 | 0.808354 | 3.227880e-50 | -8.615850e-47 |
Msa0622890 | Msa1329770 | 0.815167 | 1.062040e-51 | -8.615850e-47 |
Msa0622890 | Msa1334670 | 0.805552 | 1.263138e-49 | -8.615850e-47 |
Msa0622890 | Msa1335500 | 0.803640 | 3.165664e-49 | -8.615850e-47 |
Msa0622890 | Msa1338510 | 0.842208 | 2.975687e-58 | -8.615850e-47 |
Msa0622890 | Msa1339530 | 0.819405 | 1.181592e-52 | -8.615850e-47 |
Msa0622890 | Msa1344450 | 0.829204 | 5.866447e-55 | -8.615850e-47 |
Msa0622890 | Msa1349420 | 0.810609 | 1.058565e-50 | -8.615850e-47 |
Msa0622890 | Msa1355340 | 0.803534 | 3.329557e-49 | -8.615850e-47 |
Msa0622890 | Msa1357840 | 0.819678 | 1.023666e-52 | -8.615850e-47 |
Msa0622890 | Msa1359520 | 0.806672 | 7.343335e-50 | -8.615850e-47 |
Msa0622890 | Msa1362520 | 0.819211 | 1.308190e-52 | -8.615850e-47 |
Msa0622890 | Msa1362590 | 0.811497 | 6.797223e-51 | -8.615850e-47 |
Msa0622890 | Msa1363690 | 0.815178 | 1.056224e-51 | -8.615850e-47 |
Msa0622890 | Msa1364690 | 0.833141 | 6.324049e-56 | -8.615850e-47 |
Msa0622890 | Msa1365230 | 0.810999 | 8.718659e-51 | -8.615850e-47 |
Msa0622890 | Msa1377190 | 0.943070 | 2.329835e-102 | -8.615850e-47 |
Msa0622890 | Msa1377460 | 0.826178 | 3.127580e-54 | -8.615850e-47 |
Msa0622890 | Msa1378950 | 0.839223 | 1.801877e-57 | -8.615850e-47 |
Msa0622890 | Msa1379270 | -0.811224 | 7.789601e-51 | -8.615850e-47 |
Msa0622890 | Msa1384130 | 0.802785 | 4.758116e-49 | -8.615850e-47 |
Msa0622890 | Msa1395080 | 0.807993 | 3.852812e-50 | -8.615850e-47 |
Msa0622890 | Msa1395720 | 0.809471 | 1.861233e-50 | -8.615850e-47 |
Msa0622890 | Msa1396550 | 0.802171 | 6.368274e-49 | -8.615850e-47 |
Msa0622890 | Msa1409600 | 0.801749 | 7.772837e-49 | -8.615850e-47 |
Msa0622890 | Msa1417220 | 0.862618 | 4.461756e-64 | -8.615850e-47 |
Msa0622890 | Msa1421540 | 0.804318 | 2.288089e-49 | -8.615850e-47 |
Msa0622890 | Msa1430630 | -0.814051 | 1.875668e-51 | -8.615850e-47 |
Msa0622890 | Msa1434700 | 0.810855 | 9.366140e-51 | -8.615850e-47 |
Msa0622890 | Msa1437590 | 0.854284 | 1.363917e-61 | -8.615850e-47 |
Msa0622890 | Msa1445780 | 0.814825 | 1.264966e-51 | -8.615850e-47 |
Msa0622890 | Msa1453890 | 0.810589 | 1.069502e-50 | -8.615850e-47 |
Msa0622890 | Msa1458270 | 0.814499 | 1.493281e-51 | -8.615850e-47 |
Msa0622890 | Msa1462610 | 0.820978 | 5.154010e-53 | -8.615850e-47 |
Msa0622890 | Msa1463640 | 0.817283 | 3.574354e-52 | -8.615850e-47 |
Msa0126960 | Msa0622890 | 0.814155 | 1.779008e-51 | -8.615850e-47 |
Msa0130360 | Msa0622890 | 0.844475 | 7.386919e-59 | -8.615850e-47 |
Msa0132250 | Msa0622890 | 0.817591 | 3.045506e-52 | -8.615850e-47 |
Msa0136000 | Msa0622890 | 0.825642 | 4.193483e-54 | -8.615850e-47 |
Msa0136090 | Msa0622890 | 0.836757 | 7.761514e-57 | -8.615850e-47 |
Msa0150000 | Msa0622890 | 0.820283 | 7.442346e-53 | -8.615850e-47 |
Msa0154750 | Msa0622890 | 0.812010 | 5.256902e-51 | -8.615850e-47 |
Msa0163690 | Msa0622890 | 0.824397 | 8.251050e-54 | -8.615850e-47 |
Msa0168470 | Msa0622890 | -0.811868 | 5.644940e-51 | -8.615850e-47 |
Msa0171740 | Msa0622890 | 0.837740 | 4.348152e-57 | -8.615850e-47 |
Msa0175060 | Msa0622890 | 0.832549 | 8.870596e-56 | -8.615850e-47 |
Msa0188560 | Msa0622890 | 0.823005 | 1.747720e-53 | -8.615850e-47 |
Msa0193950 | Msa0622890 | 0.803884 | 2.817205e-49 | -8.615850e-47 |
Msa0199440 | Msa0622890 | 0.808506 | 2.995837e-50 | -8.615850e-47 |
Msa0206370 | Msa0622890 | 0.803778 | 2.963860e-49 | -8.615850e-47 |
Msa0213590 | Msa0622890 | -0.802028 | 6.812663e-49 | -8.615850e-47 |
Msa0219060 | Msa0622890 | 0.811842 | 5.717585e-51 | -8.615850e-47 |
Msa0219810 | Msa0622890 | 0.852451 | 4.577346e-61 | -8.615850e-47 |
Msa0224870 | Msa0622890 | 0.812577 | 3.953903e-51 | -8.615850e-47 |
Msa0230920 | Msa0622890 | 0.841195 | 5.507032e-58 | -8.615850e-47 |
Msa0235080 | Msa0622890 | 0.800906 | 1.157023e-48 | -8.615850e-47 |
Msa0374470 | Msa0622890 | 0.811488 | 6.827196e-51 | -8.615850e-47 |
Msa0374600 | Msa0622890 | 0.809767 | 1.607832e-50 | -8.615850e-47 |
Msa0375620 | Msa0622890 | 0.804895 | 1.734050e-49 | -8.615850e-47 |
Msa0391600 | Msa0622890 | 0.801721 | 7.877722e-49 | -8.615850e-47 |
Msa0405200 | Msa0622890 | 0.800340 | 1.508840e-48 | -8.615850e-47 |
Msa0414480 | Msa0622890 | 0.800833 | 1.197055e-48 | -8.615850e-47 |
Msa0415010 | Msa0622890 | 0.800688 | 1.281794e-48 | -8.615850e-47 |
Msa0423630 | Msa0622890 | 0.816750 | 4.707712e-52 | -8.615850e-47 |
Msa0430040 | Msa0622890 | -0.810142 | 1.335530e-50 | -8.615850e-47 |
Msa0433090 | Msa0622890 | 0.849713 | 2.710358e-60 | -8.615850e-47 |
Msa0449500 | Msa0622890 | 0.808469 | 3.049805e-50 | -8.615850e-47 |
Msa0459930 | Msa0622890 | 0.819150 | 1.350893e-52 | -8.615850e-47 |
Msa0464310 | Msa0622890 | 0.807739 | 4.363719e-50 | -8.615850e-47 |
Msa0464620 | Msa0622890 | 0.805186 | 1.507139e-49 | -8.615850e-47 |
Msa0469770 | Msa0622890 | -0.813779 | 2.153684e-51 | -8.615850e-47 |
Msa0471130 | Msa0622890 | -0.810912 | 9.101888e-51 | -8.615850e-47 |
Msa0481670 | Msa0622890 | 0.800987 | 1.113582e-48 | -8.615850e-47 |
Msa0244310 | Msa0622890 | 0.843550 | 1.307755e-58 | -8.615850e-47 |
Msa0245660 | Msa0622890 | 0.843980 | 1.003321e-58 | -8.615850e-47 |
Msa0247780 | Msa0622890 | 0.813228 | 2.846744e-51 | -8.615850e-47 |
Msa0248320 | Msa0622890 | 0.800425 | 1.450022e-48 | -8.615850e-47 |
Msa0261020 | Msa0622890 | -0.818918 | 1.525395e-52 | -8.615850e-47 |
Msa0264230 | Msa0622890 | 0.811844 | 5.711895e-51 | -8.615850e-47 |
Msa0273360 | Msa0622890 | 0.800547 | 1.369281e-48 | -8.615850e-47 |
Msa0273400 | Msa0622890 | 0.814063 | 1.864466e-51 | -8.615850e-47 |
Msa0278960 | Msa0622890 | 0.804069 | 2.578012e-49 | -8.615850e-47 |
Msa0280160 | Msa0622890 | 0.809739 | 1.630023e-50 | -8.615850e-47 |
Msa0282830 | Msa0622890 | 0.824878 | 6.356147e-54 | -8.615850e-47 |
Msa0303900 | Msa0622890 | 0.800372 | 1.486830e-48 | -8.615850e-47 |
Msa0307630 | Msa0622890 | 0.819892 | 9.148321e-53 | -8.615850e-47 |
Msa0314240 | Msa0622890 | 0.800258 | 1.567914e-48 | -8.615850e-47 |
Msa0318360 | Msa0622890 | 0.800437 | 1.441871e-48 | -8.615850e-47 |
Msa0321240 | Msa0622890 | 0.831004 | 2.133607e-55 | -8.615850e-47 |
Msa0322460 | Msa0622890 | 0.812357 | 4.416638e-51 | -8.615850e-47 |
Msa0325260 | Msa0622890 | 0.803036 | 4.221522e-49 | -8.615850e-47 |
Msa0331190 | Msa0622890 | 0.804518 | 2.079126e-49 | -8.615850e-47 |
Msa0333770 | Msa0622890 | 0.818192 | 2.228435e-52 | -8.615850e-47 |
Msa0336430 | Msa0622890 | 0.810957 | 8.903917e-51 | -8.615850e-47 |
Msa0336460 | Msa0622890 | 0.826859 | 2.152982e-54 | -8.615850e-47 |
Msa0336520 | Msa0622890 | 0.813949 | 1.975755e-51 | -8.615850e-47 |
Msa0336640 | Msa0622890 | 0.877702 | 5.085118e-69 | -8.615850e-47 |
Msa0354600 | Msa0622890 | 0.809623 | 1.726900e-50 | -8.615850e-47 |
Msa0356270 | Msa0622890 | 0.825592 | 4.310893e-54 | -8.615850e-47 |
Msa0356320 | Msa0622890 | 0.800803 | 1.214131e-48 | -8.615850e-47 |
Msa0357470 | Msa0622890 | 0.846129 | 2.636843e-59 | -8.615850e-47 |
Msa0357510 | Msa0622890 | 0.836331 | 9.962391e-57 | -8.615850e-47 |
Msa0357530 | Msa0622890 | 0.838917 | 2.162107e-57 | -8.615850e-47 |
Msa0357550 | Msa0622890 | 0.821917 | 3.129276e-53 | -8.615850e-47 |
Msa0357560 | Msa0622890 | 0.825506 | 4.517044e-54 | -8.615850e-47 |
Msa0497680 | Msa0622890 | 0.810834 | 9.463533e-51 | -8.615850e-47 |
Msa0524710 | Msa0622890 | 0.853485 | 2.316223e-61 | -8.615850e-47 |
Msa0525400 | Msa0622890 | 0.803203 | 3.898916e-49 | -8.615850e-47 |
Msa0531040 | Msa0622890 | 0.838614 | 2.590728e-57 | -8.615850e-47 |
Msa0540640 | Msa0622890 | 0.832036 | 1.188546e-55 | -8.615850e-47 |
Msa0547370 | Msa0622890 | 0.839029 | 2.022933e-57 | -8.615850e-47 |
Msa0549170 | Msa0622890 | 0.809490 | 1.844416e-50 | -8.615850e-47 |
Msa0554660 | Msa0622890 | 0.801413 | 9.109521e-49 | -8.615850e-47 |
Msa0561830 | Msa0622890 | 0.842874 | 1.980842e-58 | -8.615850e-47 |
Msa0566090 | Msa0622890 | -0.804973 | 1.669946e-49 | -8.615850e-47 |
Msa0566490 | Msa0622890 | 0.801894 | 7.259670e-49 | -8.615850e-47 |
Msa0568920 | Msa0622890 | 0.836138 | 1.115417e-56 | -8.615850e-47 |
Msa0580410 | Msa0622890 | -0.801071 | 1.070529e-48 | -8.615850e-47 |
Msa0587730 | Msa0622890 | 0.813487 | 2.496654e-51 | -8.615850e-47 |
Msa0587920 | Msa0622890 | 0.805433 | 1.337796e-49 | -8.615850e-47 |
Msa0587930 | Msa0622890 | 0.863670 | 2.109448e-64 | -8.615850e-47 |
Msa0588040 | Msa0622890 | 0.813950 | 1.974150e-51 | -8.615850e-47 |
Msa0597800 | Msa0622890 | 0.845233 | 4.614614e-59 | -8.615850e-47 |
Msa0597820 | Msa0622890 | 0.830503 | 2.831679e-55 | -8.615850e-47 |
Msa0598470 | Msa0622890 | -0.802877 | 4.554720e-49 | -8.615850e-47 |
Msa0602100 | Msa0622890 | 0.812314 | 4.513269e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0622890 | MtrunA17_Chr2g0323031 | 89.695 | 262 | 6 | 2 | 1 | 243 | 1 | 260 | 4.02e-165 | 456 |
Msa0622890 | MtrunA17_Chr4g0042041 | 54.545 | 242 | 87 | 6 | 12 | 243 | 9 | 237 | 1.46e-79 | 239 |
Msa0622890 | MtrunA17_Chr2g0319301 | 52.675 | 243 | 83 | 7 | 12 | 243 | 9 | 230 | 5.19e-75 | 227 |
Msa0622890 | MtrunA17_Chr1g0167821 | 48.108 | 185 | 93 | 3 | 62 | 243 | 62 | 246 | 1.51e-46 | 155 |
Msa0622890 | MtrunA17_Chr4g0038511 | 44.330 | 97 | 53 | 1 | 91 | 187 | 9 | 104 | 1.32e-18 | 82.8 |
Msa0622890 | MtrunA17_Chr1g0161461 | 44.565 | 92 | 50 | 1 | 93 | 184 | 82 | 172 | 1.54e-18 | 83.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0622890 | AT5G54680.1 | 55.612 | 196 | 76 | 5 | 59 | 243 | 39 | 234 | 9.47e-66 | 204 |
Msa0622890 | AT1G51070.1 | 55.440 | 193 | 78 | 5 | 59 | 243 | 34 | 226 | 1.34e-65 | 203 |
Msa0622890 | AT1G51070.2 | 55.155 | 194 | 79 | 5 | 58 | 243 | 99 | 292 | 1.78e-64 | 202 |
Msa0622890 | AT4G14410.2 | 50.888 | 169 | 71 | 5 | 81 | 243 | 115 | 277 | 2.54e-43 | 148 |
Msa0622890 | AT4G14410.3 | 50.888 | 169 | 71 | 5 | 81 | 243 | 115 | 277 | 2.54e-43 | 148 |
Msa0622890 | AT4G14410.1 | 50.888 | 169 | 71 | 5 | 81 | 243 | 121 | 283 | 3.12e-43 | 148 |
Msa0622890 | AT3G23210.2 | 50.286 | 175 | 77 | 6 | 76 | 243 | 120 | 291 | 1.11e-40 | 141 |
Msa0622890 | AT3G23210.1 | 50.000 | 174 | 79 | 5 | 76 | 243 | 149 | 320 | 1.91e-40 | 141 |
Msa0622890 | AT3G19860.2 | 46.809 | 94 | 49 | 1 | 91 | 184 | 61 | 153 | 1.12e-17 | 81.3 |
Msa0622890 | AT3G19860.1 | 46.809 | 94 | 49 | 1 | 91 | 184 | 8 | 100 | 1.30e-17 | 80.5 |
Msa0622890 | AT3G19860.3 | 46.809 | 94 | 49 | 1 | 91 | 184 | 39 | 131 | 1.69e-17 | 80.5 |
Msa0622890 | AT4G36060.4 | 44.792 | 96 | 52 | 1 | 89 | 184 | 27 | 121 | 3.98e-17 | 78.6 |
Msa0622890 | AT4G36060.2 | 44.792 | 96 | 52 | 1 | 89 | 184 | 27 | 121 | 5.00e-17 | 78.6 |
Msa0622890 | AT4G36060.3 | 44.792 | 96 | 52 | 1 | 89 | 184 | 45 | 139 | 1.02e-16 | 77.8 |
Msa0622890 | AT4G36060.1 | 44.792 | 96 | 52 | 1 | 89 | 184 | 45 | 139 | 1.16e-16 | 77.8 |
Find 76 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GACATGATTTAAAAGGTTTA+TGG | 0.124834 | 4_2:-75605609 | Msa0622890:intron |
TCTCAGCTTCATTTCTTAAT+TGG | 0.176160 | 4_2:+75605504 | None:intergenic |
TAAGCTAACCTTGTCTGTTT+TGG | 0.191189 | 4_2:+75605553 | None:intergenic |
TATTTCTGCTGCTGATTTCA+TGG | 0.212247 | 4_2:-75606864 | Msa0622890:CDS |
TCCATTTGGCTCTATGATTA+TGG | 0.214517 | 4_2:-75606902 | Msa0622890:CDS |
TCACAATAATATTATGGATA+TGG | 0.249624 | 4_2:-75606942 | None:intergenic |
CCACTGGTGGTTCCTCCATT+TGG | 0.268940 | 4_2:-75606916 | Msa0622890:CDS |
CTCAGCTTCATTTCTTAATT+GGG | 0.281253 | 4_2:+75605505 | None:intergenic |
ATGTTATTTGAACAACAATT+TGG | 0.295938 | 4_2:+75604219 | None:intergenic |
ACTAACAACTTTGTACAATA+AGG | 0.314876 | 4_2:+75604499 | None:intergenic |
ATCACGAAGCTCTTTCTTCT+CGG | 0.320152 | 4_2:+75604771 | None:intergenic |
TTATATTTGCAGCTTGGAAA+TGG | 0.339357 | 4_2:-75606491 | Msa0622890:intron |
CACTTTCTCACGACCTGCCT+TGG | 0.343619 | 4_2:+75605723 | None:intergenic |
ATGCCTTTCATTGGTTATCC+TGG | 0.370469 | 4_2:-75604625 | Msa0622890:CDS |
TGCTAACCACTTTAAGCAAC+TGG | 0.372348 | 4_2:+75604535 | None:intergenic |
CTGCTGCTTCTGCTTTCACC+TGG | 0.376252 | 4_2:-75606820 | Msa0622890:CDS |
CACAAGCTGATGCCTTTCAT+TGG | 0.397178 | 4_2:-75604634 | Msa0622890:CDS |
GGTTCATGAAGTGTTAGATT+TGG | 0.398133 | 4_2:-75604412 | Msa0622890:three_prime_UTR |
GATGCCTCAGCCTCAGTCTC+AGG | 0.418685 | 4_2:-75606798 | Msa0622890:CDS |
AAGATATATTACCGCTTTGA+AGG | 0.422144 | 4_2:+75606433 | None:intergenic |
AACTGCCACATTGAGATTCC+AGG | 0.422338 | 4_2:+75604607 | None:intergenic |
CATGAACCACGGGTGCGAAC+TGG | 0.441058 | 4_2:+75604427 | None:intergenic |
CTCCCTGGATTCAACTGTAA+TGG | 0.443647 | 4_2:-75606464 | Msa0622890:CDS |
CGACCTCCAGTTGCTTAAAG+TGG | 0.445912 | 4_2:-75604541 | Msa0622890:exon |
TCCTTTAGCAGCCATGGCAT+TGG | 0.447269 | 4_2:+75604669 | None:intergenic |
TTTCCATTACAGTTGAATCC+AGG | 0.459110 | 4_2:+75606461 | None:intergenic |
GAAGCTAGACAAAGAAAAGT+TGG | 0.461043 | 4_2:-75604734 | Msa0622890:CDS |
ACCCTCCTTCCTCTCATATG+AGG | 0.478847 | 4_2:-75606763 | Msa0622890:intron |
AAGCAACTGGAGGTCGAAGC+AGG | 0.492222 | 4_2:+75604548 | None:intergenic |
TCCAATGCCATGGCTGCTAA+AGG | 0.493863 | 4_2:-75604670 | Msa0622890:CDS |
TTCCATTACAGTTGAATCCA+GGG | 0.496195 | 4_2:+75606462 | None:intergenic |
TGTTCAAATCTACATGTAGT+TGG | 0.502227 | 4_2:-75604291 | Msa0622890:three_prime_UTR |
GAAGGGATAAATTGAATGAC+AGG | 0.502758 | 4_2:-75605699 | Msa0622890:intron |
AAATTCGACAACTTCTTACA+TGG | 0.505037 | 4_2:-75604454 | Msa0622890:three_prime_UTR |
AGTTTGTCCTTTAGCAGCCA+TGG | 0.506775 | 4_2:+75604663 | None:intergenic |
AGACTGAGGCTGAGGCATCC+AGG | 0.513096 | 4_2:+75606802 | None:intergenic |
ATTTGAACACTTGAAAATTG+TGG | 0.518101 | 4_2:+75604305 | None:intergenic |
CATTGGAGAGGAAGTTAGAC+TGG | 0.527913 | 4_2:+75604686 | None:intergenic |
GCCATAATCATAGAGCCAAA+TGG | 0.530360 | 4_2:+75606901 | None:intergenic |
CTTGGAAATGGATTACTCCC+TGG | 0.534671 | 4_2:-75606479 | Msa0622890:CDS |
AGATATATTACCGCTTTGAA+GGG | 0.546046 | 4_2:+75606434 | None:intergenic |
CGCTACAGTTGATACATCAC+AGG | 0.567747 | 4_2:-75604575 | Msa0622890:CDS |
ATGGATATGGATTCCACTGG+TGG | 0.573000 | 4_2:-75606929 | Msa0622890:CDS |
AAGGACAAAGTGAATCACTT+AGG | 0.573560 | 4_2:+75604154 | None:intergenic |
AACTTTGTACAATAAGGAAG+TGG | 0.574450 | 4_2:+75604505 | None:intergenic |
TGAGCCTGAGACTGAGGCTG+AGG | 0.575513 | 4_2:+75606794 | None:intergenic |
AAGCTGAGAGGCTCAAGGAA+AGG | 0.587154 | 4_2:-75605490 | Msa0622890:CDS |
TATGCATCTAGCTCCAAGGC+AGG | 0.594326 | 4_2:-75605736 | Msa0622890:CDS |
ATCTAACACTTCATGAACCA+CGG | 0.596586 | 4_2:+75604416 | None:intergenic |
CAATGAAAGGCATCAGCTTG+TGG | 0.597079 | 4_2:+75604635 | None:intergenic |
ATGATATGAGCCTGAGACTG+AGG | 0.597314 | 4_2:+75606788 | None:intergenic |
ACCTCATATGAGAGGAAGGA+GGG | 0.598698 | 4_2:+75606762 | None:intergenic |
GGTTAGCTTATTAAATGATG+CGG | 0.600148 | 4_2:-75605540 | Msa0622890:CDS |
AGTCACCTCATATGAGAGGA+AGG | 0.600170 | 4_2:+75606758 | None:intergenic |
ATTCCAGGATAACCAATGAA+AGG | 0.600579 | 4_2:+75604622 | None:intergenic |
GGTTAACCAGTTCGCACCCG+TGG | 0.600674 | 4_2:-75604433 | Msa0622890:three_prime_UTR |
TCTAACACTTCATGAACCAC+GGG | 0.603321 | 4_2:+75604417 | None:intergenic |
AAATGAAGCTGAGAGGCTCA+AGG | 0.603831 | 4_2:-75605495 | Msa0622890:CDS |
ATTAAATGATGCGGTTCGAG+TGG | 0.605944 | 4_2:-75605531 | Msa0622890:CDS |
CCAAATGGAGGAACCACCAG+TGG | 0.607270 | 4_2:+75606916 | None:intergenic |
TAACTTCCTCTCCAATGCCA+TGG | 0.610860 | 4_2:-75604680 | Msa0622890:CDS |
ATTATGGATATGGATTCCAC+TGG | 0.611334 | 4_2:-75606932 | Msa0622890:CDS |
ATCATATGCATCTAGCTCCA+AGG | 0.614949 | 4_2:-75605740 | Msa0622890:CDS |
TCAAAGTCACCTCATATGAG+AGG | 0.629158 | 4_2:+75606754 | None:intergenic |
TAGCAGCCATGGCATTGGAG+AGG | 0.631338 | 4_2:+75604674 | None:intergenic |
TGTGATGTATCAACTGTAGC+GGG | 0.634621 | 4_2:+75604577 | None:intergenic |
AGGTCGTGAGAAAGTGCGAA+GGG | 0.647351 | 4_2:-75605716 | Msa0622890:CDS |
CAGGTCGTGAGAAAGTGCGA+AGG | 0.654075 | 4_2:-75605717 | Msa0622890:CDS |
TAACCACTTTAAGCAACTGG+AGG | 0.675285 | 4_2:+75604538 | None:intergenic |
ATAATCATAGAGCCAAATGG+AGG | 0.683773 | 4_2:+75606904 | None:intergenic |
CACCTCATATGAGAGGAAGG+AGG | 0.683814 | 4_2:+75606761 | None:intergenic |
TACGCTGCCCAAAACAGACA+AGG | 0.685974 | 4_2:-75605561 | Msa0622890:CDS |
CTGTGATGTATCAACTGTAG+CGG | 0.693038 | 4_2:+75604576 | None:intergenic |
AATTAAGAAATGAAGCTGAG+AGG | 0.714845 | 4_2:-75605502 | Msa0622890:CDS |
GTTATCCTGGAATCTCAATG+TGG | 0.748590 | 4_2:-75604612 | Msa0622890:CDS |
TGGAAAGTAACCCTTCAAAG+CGG | 0.753113 | 4_2:-75606444 | Msa0622890:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTGTAAAAGATATTATATA+CGG | - | chr4_2:75605006-75605025 | Msa0622890:intron | 10.0% |
!! | TTTATATAAAAGATAGATAA+AGG | + | chr4_2:75606016-75606035 | None:intergenic | 10.0% |
!!! | AATTTTAAAAACAAACAATA+AGG | + | chr4_2:75606929-75606948 | None:intergenic | 10.0% |
!!! | GTATATAATATCTTTTACAA+AGG | + | chr4_2:75605007-75605026 | None:intergenic | 15.0% |
!!! | TTTTTCTTATCTTATTATAG+TGG | - | chr4_2:75605634-75605653 | Msa0622890:intron | 15.0% |
!! | AAAATAAATAACTAGTTGAT+GGG | + | chr4_2:75605944-75605963 | None:intergenic | 15.0% |
!! | TAAAATAAATAACTAGTTGA+TGG | + | chr4_2:75605945-75605964 | None:intergenic | 15.0% |
!!! | GATTTTGAATGAATTGATTT+TGG | - | chr4_2:75604394-75604413 | Msa0622890:three_prime_UTR | 20.0% |
!! | TAAGTTAGACAATAAATTTG+AGG | - | chr4_2:75604455-75604474 | Msa0622890:three_prime_UTR | 20.0% |
!! | TAAAAGATATTATATACGGT+TGG | - | chr4_2:75605010-75605029 | Msa0622890:intron | 20.0% |
!! | TTTCAATGACATGATTTAAA+AGG | - | chr4_2:75605445-75605464 | Msa0622890:intron | 20.0% |
!! | AAGTAAACTTACTTATATGA+GGG | + | chr4_2:75605760-75605779 | None:intergenic | 20.0% |
!! | ATATAAAAGATAGATAAAGG+CGG | + | chr4_2:75606013-75606032 | None:intergenic | 20.0% |
!! | TAGTAAACTAACTAATATGA+GGG | + | chr4_2:75606049-75606068 | None:intergenic | 20.0% |
!! | ATAGTAAACTAACTAATATG+AGG | + | chr4_2:75606050-75606069 | None:intergenic | 20.0% |
!!! | ATGTTATTTGAACAACAATT+TGG | + | chr4_2:75606845-75606864 | None:intergenic | 20.0% |
! | AAAATCAATTGTAGAAACTG+CGG | - | chr4_2:75604481-75604500 | Msa0622890:three_prime_UTR | 25.0% |
! | AATACTTTATATTTGCAGCT+TGG | - | chr4_2:75604564-75604583 | Msa0622890:CDS | 25.0% |
! | AATGTTGAACGATAAATTTG+AGG | - | chr4_2:75604725-75604744 | Msa0622890:CDS | 25.0% |
!! | CTTCGAGTTAGAATTAATTA+TGG | - | chr4_2:75604787-75604806 | Msa0622890:intron | 25.0% |
! | ATTACTTTATATTAGCAGCA+TGG | - | chr4_2:75604912-75604931 | Msa0622890:intron | 25.0% |
! | AAAACAACAATGAATAGAGA+GGG | + | chr4_2:75605253-75605272 | None:intergenic | 25.0% |
! | TAATATGCAACTGTAACTTT+AGG | - | chr4_2:75605287-75605306 | Msa0622890:intron | 25.0% |
! | GACATGATTTAAAAGGTTTA+TGG | - | chr4_2:75605452-75605471 | Msa0622890:intron | 25.0% |
! | CGAAAAAGTTAAAGAACTTA+AGG | - | chr4_2:75605608-75605627 | Msa0622890:intron | 25.0% |
! | AGTAAACTTACTTATATGAG+GGG | + | chr4_2:75605759-75605778 | None:intergenic | 25.0% |
! | CAAGTAAACTTACTTATATG+AGG | + | chr4_2:75605761-75605780 | None:intergenic | 25.0% |
! | TAAGATGATAACTAGTAGAT+AGG | + | chr4_2:75605804-75605823 | None:intergenic | 25.0% |
! | TACAAGTAGACTAAATTAAG+AGG | + | chr4_2:75605903-75605922 | None:intergenic | 25.0% |
!!! | CATAACTTTAGAATATGTTC+CGG | + | chr4_2:75606257-75606276 | None:intergenic | 25.0% |
! | ACTAACAACTTTGTACAATA+AGG | + | chr4_2:75606565-75606584 | None:intergenic | 25.0% |
! | ATTTGAACACTTGAAAATTG+TGG | + | chr4_2:75606759-75606778 | None:intergenic | 25.0% |
AAATCAATTGTAGAAACTGC+GGG | - | chr4_2:75604482-75604501 | Msa0622890:three_prime_UTR | 30.0% | |
TTATATTTGCAGCTTGGAAA+TGG | - | chr4_2:75604570-75604589 | Msa0622890:CDS | 30.0% | |
! | AGATATATTACCGCTTTGAA+GGG | + | chr4_2:75604630-75604649 | None:intergenic | 30.0% |
AAGATATATTACCGCTTTGA+AGG | + | chr4_2:75604631-75604650 | None:intergenic | 30.0% | |
CGAGTTAGAATTAATTATGG+TGG | - | chr4_2:75604790-75604809 | Msa0622890:intron | 30.0% | |
AACACTTCTTGAATCAAGTT+TGG | - | chr4_2:75604826-75604845 | Msa0622890:intron | 30.0% | |
TTATATTAGCAGCATGGAAA+TGG | - | chr4_2:75604918-75604937 | Msa0622890:intron | 30.0% | |
! | AGATATATTACCGCTTTGAA+GGG | + | chr4_2:75604630-75604649 | None:intergenic | 30.0% |
AAGATATATTACCGCTTTGA+AGG | + | chr4_2:75604631-75604650 | None:intergenic | 30.0% | |
AGAAAGATGACCTATATACT+CGG | - | chr4_2:75605094-75605113 | Msa0622890:intron | 30.0% | |
TCTTTAAACACCGAGTATAT+AGG | + | chr4_2:75605107-75605126 | None:intergenic | 30.0% | |
GAAAACAACAATGAATAGAG+AGG | + | chr4_2:75605254-75605273 | None:intergenic | 30.0% | |
!! | GGTTAGCTTATTAAATGATG+CGG | - | chr4_2:75605521-75605540 | Msa0622890:CDS | 30.0% |
CTCAGCTTCATTTCTTAATT+GGG | + | chr4_2:75605559-75605578 | None:intergenic | 30.0% | |
TCTCAGCTTCATTTCTTAAT+TGG | + | chr4_2:75605560-75605579 | None:intergenic | 30.0% | |
AATTAAGAAATGAAGCTGAG+AGG | - | chr4_2:75605559-75605578 | Msa0622890:CDS | 30.0% | |
!! | TATTTTAGAAGCTCTGCATA+TGG | + | chr4_2:75606165-75606184 | None:intergenic | 30.0% |
TAAAGTTATGTTTCCTTTGC+AGG | - | chr4_2:75606267-75606286 | Msa0622890:intron | 30.0% | |
AACTTTGTACAATAAGGAAG+TGG | + | chr4_2:75606559-75606578 | None:intergenic | 30.0% | |
AAATTCGACAACTTCTTACA+TGG | - | chr4_2:75606607-75606626 | Msa0622890:intron | 30.0% | |
TGTTCAAATCTACATGTAGT+TGG | - | chr4_2:75606770-75606789 | Msa0622890:CDS | 30.0% | |
ATAATCATAGAGCCAAATGG+AGG | + | chr4_2:75604160-75604179 | None:intergenic | 35.0% | |
!! | TCCATTTGGCTCTATGATTA+TGG | - | chr4_2:75604159-75604178 | Msa0622890:three_prime_UTR | 35.0% |
!! | TATTTCTGCTGCTGATTTCA+TGG | - | chr4_2:75604197-75604216 | Msa0622890:three_prime_UTR | 35.0% |
TCAAACACGCGCAAATTTAA+GGG | + | chr4_2:75604365-75604384 | None:intergenic | 35.0% | |
ATCAAACACGCGCAAATTTA+AGG | + | chr4_2:75604366-75604385 | None:intergenic | 35.0% | |
TTCCATTACAGTTGAATCCA+GGG | + | chr4_2:75604602-75604621 | None:intergenic | 35.0% | |
TTTCCATTACAGTTGAATCC+AGG | + | chr4_2:75604603-75604622 | None:intergenic | 35.0% | |
TGAATCAAGTTTGGTTACTC+CGG | - | chr4_2:75604835-75604854 | Msa0622890:intron | 35.0% | |
TCGATCACAAAGTGTATGTT+TGG | + | chr4_2:75604869-75604888 | None:intergenic | 35.0% | |
! | GATTCAACAGTACTGGAAAA+CGG | - | chr4_2:75604952-75604971 | Msa0622890:intron | 35.0% |
TGTAACGAAGACAGAGTAAA+AGG | + | chr4_2:75605227-75605246 | None:intergenic | 35.0% | |
! | GCAACTGTAACTTTAGGTTA+AGG | - | chr4_2:75605293-75605312 | Msa0622890:intron | 35.0% |
GAAGGGATAAATTGAATGAC+AGG | - | chr4_2:75605362-75605381 | Msa0622890:intron | 35.0% | |
! | AAGCTAACCTTGTCTGTTTT+GGG | + | chr4_2:75605510-75605529 | None:intergenic | 35.0% |
! | TAAGCTAACCTTGTCTGTTT+TGG | + | chr4_2:75605511-75605530 | None:intergenic | 35.0% |
TAGATAAAGATGTCGTCATG+TGG | + | chr4_2:75605714-75605733 | None:intergenic | 35.0% | |
!! | AAAATACTCTGGAGTGGATT+TGG | - | chr4_2:75606179-75606198 | Msa0622890:intron | 35.0% |
! | TTTAGAATATGTTCCGGACT+TGG | + | chr4_2:75606251-75606270 | None:intergenic | 35.0% |
GAAGCTAGACAAAGAAAAGT+TGG | - | chr4_2:75606327-75606346 | Msa0622890:intron | 35.0% | |
ATTCCAGGATAACCAATGAA+AGG | + | chr4_2:75606442-75606461 | None:intergenic | 35.0% | |
ATCTAACACTTCATGAACCA+CGG | + | chr4_2:75606648-75606667 | None:intergenic | 35.0% | |
! | GGTTCATGAAGTGTTAGATT+TGG | - | chr4_2:75606649-75606668 | Msa0622890:intron | 35.0% |
AAGGACAAAGTGAATCACTT+AGG | + | chr4_2:75606910-75606929 | None:intergenic | 35.0% | |
GCCATAATCATAGAGCCAAA+TGG | + | chr4_2:75604163-75604182 | None:intergenic | 40.0% | |
TCAAAGTCACCTCATATGAG+AGG | + | chr4_2:75604310-75604329 | None:intergenic | 40.0% | |
TGGAAAGTAACCCTTCAAAG+CGG | - | chr4_2:75604617-75604636 | Msa0622890:CDS | 40.0% | |
! | TGTATGTTTGGTTCCACTTC+CGG | + | chr4_2:75604857-75604876 | None:intergenic | 40.0% |
CATGGAAATGGAATACTCAC+TGG | - | chr4_2:75604930-75604949 | Msa0622890:intron | 40.0% | |
! | GAGTAAAAGGCGCAAATTGA+AGG | + | chr4_2:75605214-75605233 | None:intergenic | 40.0% |
! | ATCATATGCATCTAGCTCCA+AGG | - | chr4_2:75605321-75605340 | Msa0622890:intron | 40.0% |
ATTAAATGATGCGGTTCGAG+TGG | - | chr4_2:75605530-75605549 | Msa0622890:CDS | 40.0% | |
ACTTGTAAATGTGCTGAGCA+CGG | - | chr4_2:75605916-75605935 | Msa0622890:intron | 40.0% | |
AGATATGGTTGAGCACACAT+AGG | - | chr4_2:75606097-75606116 | Msa0622890:intron | 40.0% | |
!! | GCAGAGCTTCTAAAATACTC+TGG | - | chr4_2:75606168-75606187 | Msa0622890:intron | 40.0% |
!! | GCTTCTAAAATACTCTGGAG+TGG | - | chr4_2:75606173-75606192 | Msa0622890:intron | 40.0% |
GATTTGGACTTGTGGAACAA+AGG | - | chr4_2:75606195-75606214 | Msa0622890:intron | 40.0% | |
! | ACAAAGGTCTAGTTCAGAGA+TGG | - | chr4_2:75606211-75606230 | Msa0622890:intron | 40.0% |
ATCACGAAGCTCTTTCTTCT+CGG | + | chr4_2:75606293-75606312 | None:intergenic | 40.0% | |
! | ATGCCTTTCATTGGTTATCC+TGG | - | chr4_2:75606436-75606455 | Msa0622890:intron | 40.0% |
GTTATCCTGGAATCTCAATG+TGG | - | chr4_2:75606449-75606468 | Msa0622890:CDS | 40.0% | |
TGTGATGTATCAACTGTAGC+GGG | + | chr4_2:75606487-75606506 | None:intergenic | 40.0% | |
CTGTGATGTATCAACTGTAG+CGG | + | chr4_2:75606488-75606507 | None:intergenic | 40.0% | |
TAACCACTTTAAGCAACTGG+AGG | + | chr4_2:75606526-75606545 | None:intergenic | 40.0% | |
TGCTAACCACTTTAAGCAAC+TGG | + | chr4_2:75606529-75606548 | None:intergenic | 40.0% | |
TCTAACACTTCATGAACCAC+GGG | + | chr4_2:75606647-75606666 | None:intergenic | 40.0% | |
ATGGATATGGATTCCACTGG+TGG | - | chr4_2:75604132-75604151 | Msa0622890:three_prime_UTR | 45.0% | |
ATGATATGAGCCTGAGACTG+AGG | + | chr4_2:75604276-75604295 | None:intergenic | 45.0% | |
ACCTCATATGAGAGGAAGGA+GGG | + | chr4_2:75604302-75604321 | None:intergenic | 45.0% | |
AGTCACCTCATATGAGAGGA+AGG | + | chr4_2:75604306-75604325 | None:intergenic | 45.0% | |
!! | CTTGGAAATGGATTACTCCC+TGG | - | chr4_2:75604582-75604601 | Msa0622890:CDS | 45.0% |
CTCCCTGGATTCAACTGTAA+TGG | - | chr4_2:75604597-75604616 | Msa0622890:CDS | 45.0% | |
AAGTTTGGTTACTCCGGAAG+TGG | - | chr4_2:75604841-75604860 | Msa0622890:intron | 45.0% | |
CTCACTGGATTCAACAGTAC+TGG | - | chr4_2:75604945-75604964 | Msa0622890:intron | 45.0% | |
AAATGAAGCTGAGAGGCTCA+AGG | - | chr4_2:75605566-75605585 | Msa0622890:CDS | 45.0% | |
TAAGTTTACTTGCACCTGCG+CGG | - | chr4_2:75605769-75605788 | Msa0622890:intron | 45.0% | |
CTTGTAAATGTGCTGAGCAC+GGG | - | chr4_2:75605917-75605936 | Msa0622890:intron | 45.0% | |
! | TAGATAAAGGCGGTGTCAAG+TGG | + | chr4_2:75606003-75606022 | None:intergenic | 45.0% |
CCATATCTCGAGGTTCTCAT+TGG | + | chr4_2:75606085-75606104 | None:intergenic | 45.0% | |
CCAATGAGAACCTCGAGATA+TGG | - | chr4_2:75606082-75606101 | Msa0622890:intron | 45.0% | |
CATTGGAGAGGAAGTTAGAC+TGG | + | chr4_2:75606378-75606397 | None:intergenic | 45.0% | |
TAACTTCCTCTCCAATGCCA+TGG | - | chr4_2:75606381-75606400 | Msa0622890:intron | 45.0% | |
AGTTTGTCCTTTAGCAGCCA+TGG | + | chr4_2:75606401-75606420 | None:intergenic | 45.0% | |
!! | CAATGAAAGGCATCAGCTTG+TGG | + | chr4_2:75606429-75606448 | None:intergenic | 45.0% |
CACAAGCTGATGCCTTTCAT+TGG | - | chr4_2:75606427-75606446 | Msa0622890:intron | 45.0% | |
AACTGCCACATTGAGATTCC+AGG | + | chr4_2:75606457-75606476 | None:intergenic | 45.0% | |
! | CGCTACAGTTGATACATCAC+AGG | - | chr4_2:75606486-75606505 | Msa0622890:intron | 45.0% |
!!! | TATTTTATTTTTATAAAACA+CGG | - | chr4_2:75605958-75605977 | Msa0622890:intron | 5.0% |
ACCCTCCTTCCTCTCATATG+AGG | - | chr4_2:75604298-75604317 | Msa0622890:three_prime_UTR | 50.0% | |
CACCTCATATGAGAGGAAGG+AGG | + | chr4_2:75604303-75604322 | None:intergenic | 50.0% | |
TGGAAAACGGCCCTTCAAAG+CGG | - | chr4_2:75604965-75604984 | Msa0622890:intron | 50.0% | |
! | TATGCATCTAGCTCCAAGGC+AGG | - | chr4_2:75605325-75605344 | Msa0622890:intron | 50.0% |
! | AGGTCGTGAGAAAGTGCGAA+GGG | - | chr4_2:75605345-75605364 | Msa0622890:intron | 50.0% |
!! | TCTGTTTTGGGCAGCGTATC+AGG | + | chr4_2:75605498-75605517 | None:intergenic | 50.0% |
TACGCTGCCCAAAACAGACA+AGG | - | chr4_2:75605500-75605519 | Msa0622890:CDS | 50.0% | |
AAGCTGAGAGGCTCAAGGAA+AGG | - | chr4_2:75605571-75605590 | Msa0622890:CDS | 50.0% | |
AGTATCTACGTTGCGTCACG+TGG | - | chr4_2:75605839-75605858 | Msa0622890:intron | 50.0% | |
GTGTGCTCAACCATATCTCG+AGG | + | chr4_2:75606095-75606114 | None:intergenic | 50.0% | |
! | CTGGAGTGGATTTGGACTTG+TGG | - | chr4_2:75606187-75606206 | Msa0622890:intron | 50.0% |
! | TCTAGTTCAGAGATGGACCG+TGG | - | chr4_2:75606218-75606237 | Msa0622890:intron | 50.0% |
CTAGTTCAGAGATGGACCGT+GGG | - | chr4_2:75606219-75606238 | Msa0622890:intron | 50.0% | |
ATATGTTCCGGACTTGGCCA+CGG | + | chr4_2:75606245-75606264 | None:intergenic | 50.0% | |
TCTTTCTTCTCGGCCTGCAA+AGG | + | chr4_2:75606283-75606302 | None:intergenic | 50.0% | |
TCCAATGCCATGGCTGCTAA+AGG | - | chr4_2:75606391-75606410 | Msa0622890:intron | 50.0% | |
TCCTTTAGCAGCCATGGCAT+TGG | + | chr4_2:75606395-75606414 | None:intergenic | 50.0% | |
CGACCTCCAGTTGCTTAAAG+TGG | - | chr4_2:75606520-75606539 | Msa0622890:intron | 50.0% | |
CCAAATGGAGGAACCACCAG+TGG | + | chr4_2:75604148-75604167 | None:intergenic | 55.0% | |
CCACTGGTGGTTCCTCCATT+TGG | - | chr4_2:75604145-75604164 | Msa0622890:three_prime_UTR | 55.0% | |
! | CTGCTGCTTCTGCTTTCACC+TGG | - | chr4_2:75604241-75604260 | Msa0622890:three_prime_UTR | 55.0% |
CACTTTCTCACGACCTGCCT+TGG | + | chr4_2:75605341-75605360 | None:intergenic | 55.0% | |
! | CAGGTCGTGAGAAAGTGCGA+AGG | - | chr4_2:75605344-75605363 | Msa0622890:intron | 55.0% |
TGTCGTCATGTGGCACAACG+TGG | + | chr4_2:75605704-75605723 | None:intergenic | 55.0% | |
! | CGGTGTCAAGTGGCACAACA+TGG | + | chr4_2:75605993-75606012 | None:intergenic | 55.0% |
AAACCATGATCTGCACGCCG+TGG | + | chr4_2:75606128-75606147 | None:intergenic | 55.0% | |
! | TAGCAGCCATGGCATTGGAG+AGG | + | chr4_2:75606390-75606409 | None:intergenic | 55.0% |
AAGCAACTGGAGGTCGAAGC+AGG | + | chr4_2:75606516-75606535 | None:intergenic | 55.0% | |
! | AGACTGAGGCTGAGGCATCC+AGG | + | chr4_2:75604262-75604281 | None:intergenic | 60.0% |
GATGCCTCAGCCTCAGTCTC+AGG | - | chr4_2:75604263-75604282 | Msa0622890:three_prime_UTR | 60.0% | |
TGAGCCTGAGACTGAGGCTG+AGG | + | chr4_2:75604270-75604289 | None:intergenic | 60.0% | |
AGCACACATAGGCCTCGCCA+CGG | - | chr4_2:75606108-75606127 | Msa0622890:intron | 60.0% | |
GGTTAACCAGTTCGCACCCG+TGG | - | chr4_2:75606628-75606647 | Msa0622890:intron | 60.0% | |
CATGAACCACGGGTGCGAAC+TGG | + | chr4_2:75606637-75606656 | None:intergenic | 60.0% | |
ATAGGACCTATGCGCCGCGC+AGG | + | chr4_2:75605786-75605805 | None:intergenic | 65.0% | |
ATGATCTGCACGCCGTGGCG+AGG | + | chr4_2:75606123-75606142 | None:intergenic | 65.0% | |
TCGCCACGGCGTGCAGATCA+TGG | - | chr4_2:75606122-75606141 | Msa0622890:intron | 65.0% | |
CTTGCACCTGCGCGGCGCAT+AGG | - | chr4_2:75605777-75605796 | Msa0622890:intron | 70.0% | |
CAGAGATGGACCGTGGGCCG+TGG | - | chr4_2:75606225-75606244 | Msa0622890:intron | 70.0% | |
CCGGACTTGGCCACGGCCCA+CGG | + | chr4_2:75606238-75606257 | None:intergenic | 75.0% | |
CCGTGGGCCGTGGCCAAGTC+CGG | - | chr4_2:75606235-75606254 | Msa0622890:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 75604132 | 75606951 | 75604132 | ID=Msa0622890;Name=Msa0622890 |
chr4_2 | mRNA | 75604132 | 75606951 | 75604132 | ID=Msa0622890-mRNA-1;Parent=Msa0622890;Name=Msa0622890-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.75|1|1|1|1|5|414|243 |
chr4_2 | exon | 75604132 | 75604794 | 75604132 | ID=Msa0622890-mRNA-1:exon:22982;Parent=Msa0622890-mRNA-1 |
chr4_2 | exon | 75605454 | 75605616 | 75605454 | ID=Msa0622890-mRNA-1:exon:22981;Parent=Msa0622890-mRNA-1 |
chr4_2 | exon | 75605700 | 75605774 | 75605700 | ID=Msa0622890-mRNA-1:exon:22980;Parent=Msa0622890-mRNA-1 |
chr4_2 | exon | 75606445 | 75606501 | 75606445 | ID=Msa0622890-mRNA-1:exon:22979;Parent=Msa0622890-mRNA-1 |
chr4_2 | exon | 75606764 | 75606951 | 75606764 | ID=Msa0622890-mRNA-1:exon:22978;Parent=Msa0622890-mRNA-1 |
chr4_2 | CDS | 75606764 | 75606951 | 75606764 | ID=Msa0622890-mRNA-1:cds;Parent=Msa0622890-mRNA-1 |
chr4_2 | CDS | 75606445 | 75606501 | 75606445 | ID=Msa0622890-mRNA-1:cds;Parent=Msa0622890-mRNA-1 |
chr4_2 | CDS | 75605700 | 75605774 | 75605700 | ID=Msa0622890-mRNA-1:cds;Parent=Msa0622890-mRNA-1 |
chr4_2 | CDS | 75605454 | 75605616 | 75605454 | ID=Msa0622890-mRNA-1:cds;Parent=Msa0622890-mRNA-1 |
chr4_2 | CDS | 75604546 | 75604794 | 75604546 | ID=Msa0622890-mRNA-1:cds;Parent=Msa0622890-mRNA-1 |
chr4_2 | three_prime_UTR | 75604132 | 75604545 | 75604132 | ID=Msa0622890-mRNA-1:three_prime_utr;Parent=Msa0622890-mRNA-1 |
Gene Sequence |
Protein sequence |