Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0384170 | XP_013462134.1 | 90.000 | 40 | 4 | 0 | 1 | 40 | 1 | 40 | 1.59e-15 | 77.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0384170 | A0A072V2A3 | 90.000 | 40 | 4 | 0 | 1 | 40 | 1 | 40 | 7.61e-16 | 77.4 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004940 | Msa0384170 | 0.802003 | 6.893998e-49 | -8.615850e-47 |
| Msa0024650 | Msa0384170 | 0.828777 | 7.445186e-55 | -8.615850e-47 |
| Msa0025570 | Msa0384170 | 0.801000 | 1.106586e-48 | -8.615850e-47 |
| Msa0036260 | Msa0384170 | 0.801076 | 1.067826e-48 | -8.615850e-47 |
| Msa0038010 | Msa0384170 | 0.809256 | 2.069663e-50 | -8.615850e-47 |
| Msa0072030 | Msa0384170 | 0.807407 | 5.131852e-50 | -8.615850e-47 |
| Msa0084190 | Msa0384170 | 0.821020 | 5.041960e-53 | -8.615850e-47 |
| Msa0120070 | Msa0384170 | 0.803785 | 2.953422e-49 | -8.615850e-47 |
| Msa0120450 | Msa0384170 | 0.810163 | 1.321417e-50 | -8.615850e-47 |
| Msa0130360 | Msa0384170 | 0.805982 | 1.026267e-49 | -8.615850e-47 |
| Msa0132250 | Msa0384170 | 0.821780 | 3.366440e-53 | -8.615850e-47 |
| Msa0136090 | Msa0384170 | 0.813543 | 2.427652e-51 | -8.615850e-47 |
| Msa0163340 | Msa0384170 | 0.814670 | 1.368630e-51 | -8.615850e-47 |
| Msa0163370 | Msa0384170 | 0.825960 | 3.525752e-54 | -8.615850e-47 |
| Msa0188560 | Msa0384170 | 0.830731 | 2.489151e-55 | -8.615850e-47 |
| Msa0191100 | Msa0384170 | 0.815549 | 8.732949e-52 | -8.615850e-47 |
| Msa0195190 | Msa0384170 | 0.802595 | 5.207482e-49 | -8.615850e-47 |
| Msa0230920 | Msa0384170 | 0.822163 | 2.744283e-53 | -8.615850e-47 |
| Msa0235080 | Msa0384170 | 0.800723 | 1.260893e-48 | -8.615850e-47 |
| Msa0384170 | Msa0414480 | 0.816384 | 5.685575e-52 | -8.615850e-47 |
| Msa0384170 | Msa0425950 | 0.804047 | 2.605559e-49 | -8.615850e-47 |
| Msa0384170 | Msa0433090 | 0.807603 | 4.664134e-50 | -8.615850e-47 |
| Msa0384170 | Msa0434910 | 0.853723 | 1.979035e-61 | -8.615850e-47 |
| Msa0384170 | Msa0444210 | 0.833434 | 5.344079e-56 | -8.615850e-47 |
| Msa0384170 | Msa0464620 | 0.804854 | 1.768421e-49 | -8.615850e-47 |
| Msa0384170 | Msa0478860 | 0.910248 | 2.315724e-82 | -8.615850e-47 |
| Msa0384170 | Msa0524710 | 0.813600 | 2.358210e-51 | -8.615850e-47 |
| Msa0384170 | Msa0531030 | 0.802170 | 6.369333e-49 | -8.615850e-47 |
| Msa0384170 | Msa0531040 | 0.801895 | 7.257056e-49 | -8.615850e-47 |
| Msa0384170 | Msa0531080 | 0.803093 | 4.110068e-49 | -8.615850e-47 |
| Msa0384170 | Msa0548790 | 0.806776 | 6.980829e-50 | -8.615850e-47 |
| Msa0384170 | Msa0554660 | 0.822450 | 2.353884e-53 | -8.615850e-47 |
| Msa0384170 | Msa0561830 | 0.802368 | 5.798394e-49 | -8.615850e-47 |
| Msa0384170 | Msa0568920 | 0.805943 | 1.045835e-49 | -8.615850e-47 |
| Msa0384170 | Msa0587730 | 0.809730 | 1.637725e-50 | -8.615850e-47 |
| Msa0384170 | Msa0587920 | 0.813469 | 2.519399e-51 | -8.615850e-47 |
| Msa0384170 | Msa0587930 | 0.802226 | 6.203010e-49 | -8.615850e-47 |
| Msa0384170 | Msa0589740 | 0.813341 | 2.688385e-51 | -8.615850e-47 |
| Msa0384170 | Msa0604280 | 0.806515 | 7.925557e-50 | -8.615850e-47 |
| Msa0384170 | Msa0605470 | 0.807651 | 4.554766e-50 | -8.615850e-47 |
| Msa0384170 | Msa0614960 | 0.802822 | 4.675140e-49 | -8.615850e-47 |
| Msa0384170 | Msa0629720 | 0.805596 | 1.236543e-49 | -8.615850e-47 |
| Msa0384170 | Msa0643840 | 0.801097 | 1.057324e-48 | -8.615850e-47 |
| Msa0384170 | Msa0655370 | 0.803369 | 3.602654e-49 | -8.615850e-47 |
| Msa0384170 | Msa0655430 | 0.801520 | 8.662914e-49 | -8.615850e-47 |
| Msa0384170 | Msa0686830 | 0.801279 | 9.704028e-49 | -8.615850e-47 |
| Msa0384170 | Msa0699170 | 0.812339 | 4.456345e-51 | -8.615850e-47 |
| Msa0384170 | Msa0703000 | 0.800638 | 1.312374e-48 | -8.615850e-47 |
| Msa0384170 | Msa0709790 | 0.842166 | 3.052100e-58 | -8.615850e-47 |
| Msa0384170 | Msa0711230 | 0.813265 | 2.794295e-51 | -8.615850e-47 |
| Msa0384170 | Msa0716980 | 0.804945 | 1.692965e-49 | -8.615850e-47 |
| Msa0384170 | Msa0717030 | 0.825764 | 3.922437e-54 | -8.615850e-47 |
| Msa0384170 | Msa0727480 | 0.810359 | 1.198551e-50 | -8.615850e-47 |
| Msa0384170 | Msa0730890 | 0.808608 | 2.849382e-50 | -8.615850e-47 |
| Msa0384170 | Msa0750790 | 0.811826 | 5.766248e-51 | -8.615850e-47 |
| Msa0384170 | Msa0758150 | 0.810132 | 1.341687e-50 | -8.615850e-47 |
| Msa0384170 | Msa0768670 | 0.826631 | 2.439395e-54 | -8.615850e-47 |
| Msa0384170 | Msa0768720 | 0.809860 | 1.535828e-50 | -8.615850e-47 |
| Msa0384170 | Msa0776340 | 0.837422 | 5.246924e-57 | -8.615850e-47 |
| Msa0384170 | Msa0812720 | 0.800808 | 1.211344e-48 | -8.615850e-47 |
| Msa0384170 | Msa0813840 | 0.821316 | 4.309063e-53 | -8.615850e-47 |
| Msa0384170 | Msa0817100 | 0.809285 | 2.040370e-50 | -8.615850e-47 |
| Msa0384170 | Msa0847140 | 0.801745 | 7.788596e-49 | -8.615850e-47 |
| Msa0384170 | Msa0853080 | 0.806231 | 9.094089e-50 | -8.615850e-47 |
| Msa0384170 | Msa0854380 | 0.805810 | 1.115368e-49 | -8.615850e-47 |
| Msa0384170 | Msa0863860 | 0.800637 | 1.312909e-48 | -8.615850e-47 |
| Msa0384170 | Msa0890210 | 0.848820 | 4.803142e-60 | -8.615850e-47 |
| Msa0384170 | Msa0896920 | 0.846407 | 2.214060e-59 | -8.615850e-47 |
| Msa0384170 | Msa0898970 | 0.800648 | 1.305740e-48 | -8.615850e-47 |
| Msa0384170 | Msa0913550 | 0.805097 | 1.573579e-49 | -8.615850e-47 |
| Msa0384170 | Msa0933610 | 0.803166 | 3.968006e-49 | -8.615850e-47 |
| Msa0384170 | Msa0950090 | 0.802851 | 4.609879e-49 | -8.615850e-47 |
| Msa0384170 | Msa0962290 | 0.804798 | 1.816935e-49 | -8.615850e-47 |
| Msa0384170 | Msa0970790 | 0.820083 | 8.273254e-53 | -8.615850e-47 |
| Msa0384170 | Msa0996980 | 0.813210 | 2.872380e-51 | -8.615850e-47 |
| Msa0384170 | Msa1006170 | 0.827576 | 1.449255e-54 | -8.615850e-47 |
| Msa0384170 | Msa1024420 | 0.807766 | 4.306443e-50 | -8.615850e-47 |
| Msa0384170 | Msa1026050 | 0.815612 | 8.456140e-52 | -8.615850e-47 |
| Msa0384170 | Msa1029860 | 0.800911 | 1.154217e-48 | -8.615850e-47 |
| Msa0384170 | Msa1031060 | 0.836826 | 7.452563e-57 | -8.615850e-47 |
| Msa0384170 | Msa1041910 | 0.816220 | 6.188259e-52 | -8.615850e-47 |
| Msa0384170 | Msa1061670 | 0.821086 | 4.867910e-53 | -8.615850e-47 |
| Msa0384170 | Msa1064940 | 0.801501 | 8.738329e-49 | -8.615850e-47 |
| Msa0384170 | Msa1068730 | 0.802221 | 6.218273e-49 | -8.615850e-47 |
| Msa0384170 | Msa1075030 | 0.812428 | 4.260537e-51 | -8.615850e-47 |
| Msa0384170 | Msa1084800 | 0.819461 | 1.147410e-52 | -8.615850e-47 |
| Msa0384170 | Msa1085820 | 0.805122 | 1.554377e-49 | -8.615850e-47 |
| Msa0384170 | Msa1106960 | 0.815372 | 9.561315e-52 | -8.615850e-47 |
| Msa0384170 | Msa1107520 | 0.802118 | 6.529175e-49 | -8.615850e-47 |
| Msa0384170 | Msa1109540 | 0.803946 | 2.734885e-49 | -8.615850e-47 |
| Msa0384170 | Msa1109880 | 0.819337 | 1.224942e-52 | -8.615850e-47 |
| Msa0384170 | Msa1115900 | 0.834081 | 3.683846e-56 | -8.615850e-47 |
| Msa0384170 | Msa1119670 | 0.837577 | 4.787920e-57 | -8.615850e-47 |
| Msa0384170 | Msa1162370 | 0.810790 | 9.676725e-51 | -8.615850e-47 |
| Msa0384170 | Msa1167960 | 0.808223 | 3.442470e-50 | -8.615850e-47 |
| Msa0384170 | Msa1211940 | 0.800140 | 1.657436e-48 | -8.615850e-47 |
| Msa0384170 | Msa1223960 | 0.813362 | 2.660385e-51 | -8.615850e-47 |
| Msa0384170 | Msa1241960 | 0.802598 | 5.200217e-49 | -8.615850e-47 |
| Msa0384170 | Msa1259570 | 0.812216 | 4.740859e-51 | -8.615850e-47 |
| Msa0384170 | Msa1263110 | 0.801730 | 7.845749e-49 | -8.615850e-47 |
| Msa0384170 | Msa1269500 | 0.818351 | 2.051230e-52 | -8.615850e-47 |
| Msa0384170 | Msa1273320 | 0.807242 | 5.563044e-50 | -8.615850e-47 |
| Msa0384170 | Msa1311070 | 0.816174 | 6.336197e-52 | -8.615850e-47 |
| Msa0384170 | Msa1319010 | 0.804753 | 1.856713e-49 | -8.615850e-47 |
| Msa0384170 | Msa1322380 | 0.800546 | 1.370104e-48 | -8.615850e-47 |
| Msa0384170 | Msa1323120 | 0.808015 | 3.811976e-50 | -8.615850e-47 |
| Msa0384170 | Msa1338510 | 0.819862 | 9.294452e-53 | -8.615850e-47 |
| Msa0384170 | Msa1349420 | 0.810386 | 1.182777e-50 | -8.615850e-47 |
| Msa0384170 | Msa1357840 | 0.814098 | 1.831255e-51 | -8.615850e-47 |
| Msa0384170 | Msa1364690 | 0.805458 | 1.321924e-49 | -8.615850e-47 |
| Msa0384170 | Msa1377190 | 0.802222 | 6.216298e-49 | -8.615850e-47 |
| Msa0384170 | Msa1378950 | 0.808020 | 3.801359e-50 | -8.615850e-47 |
| Msa0384170 | Msa1384130 | 0.803612 | 3.208452e-49 | -8.615850e-47 |
| Msa0384170 | Msa1395080 | 0.801997 | 6.915195e-49 | -8.615850e-47 |
| Msa0384170 | Msa1409600 | 0.804420 | 2.179385e-49 | -8.615850e-47 |
| Msa0384170 | Msa1417220 | 0.812179 | 4.827890e-51 | -8.615850e-47 |
| Msa0384170 | Msa1437590 | 0.813237 | 2.833380e-51 | -8.615850e-47 |
| Msa0384170 | Msa1445780 | 0.813991 | 1.933796e-51 | -8.615850e-47 |
| Msa0384170 | Msa1458270 | 0.813652 | 2.296731e-51 | -8.615850e-47 |
| Msa0240580 | Msa0384170 | 0.805490 | 1.301589e-49 | -8.615850e-47 |
| Msa0245660 | Msa0384170 | 0.810703 | 1.010337e-50 | -8.615850e-47 |
| Msa0247780 | Msa0384170 | 0.806565 | 7.734015e-50 | -8.615850e-47 |
| Msa0278960 | Msa0384170 | 0.803626 | 3.186074e-49 | -8.615850e-47 |
| Msa0325260 | Msa0384170 | 0.804232 | 2.384266e-49 | -8.615850e-47 |
| Msa0333770 | Msa0384170 | 0.809382 | 1.944920e-50 | -8.615850e-47 |
| Msa0349910 | Msa0384170 | 0.800443 | 1.437676e-48 | -8.615850e-47 |
| Msa0356240 | Msa0384170 | 0.802171 | 6.365701e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0384170 | MtrunA17_Chr3g0141701 | 90.000 | 40 | 4 | 0 | 1 | 40 | 1 | 40 | 1.46e-19 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 16 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATTCCAACATTTGTGTTC+TGG | 0.239933 | 3_1:+87265572 | Msa0384170:CDS |
| AATTCCAACATTTGTGTTCT+GGG | 0.279236 | 3_1:+87265573 | Msa0384170:CDS |
| AGTAGGACACAGAGATTAAT+TGG | 0.288731 | 3_1:-87265756 | None:intergenic |
| ATCTCTGTGTCCTACTTTGC+AGG | 0.305738 | 3_1:+87265763 | Msa0384170:CDS |
| TTTGACTTGGACTTGTACTT+TGG | 0.409420 | 3_1:-87266598 | None:intergenic |
| CTCATGTATCTTGTTTGACT+TGG | 0.410489 | 3_1:-87266611 | None:intergenic |
| TGTTATATTTCCTGCAAAGT+AGG | 0.463380 | 3_1:-87265773 | None:intergenic |
| TTTACTATTTGATGCAAGGT+CGG | 0.516012 | 3_1:-87265650 | None:intergenic |
| TTGTACTTTGGAAGCATCAT+CGG | 0.516399 | 3_1:-87266586 | None:intergenic |
| ATTCTTTACTATTTGATGCA+AGG | 0.520583 | 3_1:-87265654 | None:intergenic |
| GTGTTGGTGTGATTATTGTA+AGG | 0.522525 | 3_1:-87265600 | None:intergenic |
| AAAGCCCAGAACACAAATGT+TGG | 0.544379 | 3_1:-87265577 | None:intergenic |
| GAAACAACAACAAAATCAAA+CGG | 0.548764 | 3_1:+87266648 | Msa0384170:CDS |
| AAATATAACAGAGACAATGA+AGG | 0.611259 | 3_1:+87265786 | Msa0384170:CDS |
| TACTTTGGAAGCATCATCGG+TGG | 0.630715 | 3_1:-87266583 | None:intergenic |
| TCGGACAAGAGAATTAGTGT+TGG | 0.641471 | 3_1:-87265616 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTAATTGTATCAATTT+TGG | - | chr3_1:87265716-87265735 | None:intergenic | 10.0% |
| !!! | AATTAATTTTCTCTTTAATT+AGG | + | chr3_1:87265726-87265745 | Msa0384170:intron | 10.0% |
| !!! | TTGTTTCTATTTATATAAAA+AGG | + | chr3_1:87266267-87266286 | Msa0384170:intron | 10.0% |
| !!! | TGTTTCTATTTATATAAAAA+GGG | + | chr3_1:87266268-87266287 | Msa0384170:intron | 10.0% |
| !!! | AAAATTAATTGTATCAATTT+TGG | - | chr3_1:87265716-87265735 | None:intergenic | 10.0% |
| !!! | AATTAATTTTCTCTTTAATT+AGG | + | chr3_1:87265726-87265745 | Msa0384170:intron | 10.0% |
| !!! | TTGTTTCTATTTATATAAAA+AGG | + | chr3_1:87266267-87266286 | Msa0384170:intron | 10.0% |
| !!! | TGTTTCTATTTATATAAAAA+GGG | + | chr3_1:87266268-87266287 | Msa0384170:intron | 10.0% |
| !! | TATTAAAAAATAATTCACTG+CGG | - | chr3_1:87266084-87266103 | None:intergenic | 15.0% |
| !! | GTTTCTATTTATATAAAAAG+GGG | + | chr3_1:87266269-87266288 | Msa0384170:intron | 15.0% |
| !! | TATTAAAAAATAATTCACTG+CGG | - | chr3_1:87266084-87266103 | None:intergenic | 15.0% |
| !! | GTTTCTATTTATATAAAAAG+GGG | + | chr3_1:87266269-87266288 | Msa0384170:intron | 15.0% |
| !! | ATTAAAAAATAATTCACTGC+GGG | - | chr3_1:87266083-87266102 | None:intergenic | 20.0% |
| !! | TATGTTAAGGAAATGTTAAA+GGG | - | chr3_1:87266161-87266180 | None:intergenic | 20.0% |
| !! | TTATGTTAAGGAAATGTTAA+AGG | - | chr3_1:87266162-87266181 | None:intergenic | 20.0% |
| !!! | AAATTGCCTTTGATTTTTAA+AGG | - | chr3_1:87266198-87266217 | None:intergenic | 20.0% |
| !!! | ATAATTTTTTACATTTGGGA+CGG | + | chr3_1:87266299-87266318 | Msa0384170:intron | 20.0% |
| !! | ATTAAAAAATAATTCACTGC+GGG | - | chr3_1:87266083-87266102 | None:intergenic | 20.0% |
| !! | TATGTTAAGGAAATGTTAAA+GGG | - | chr3_1:87266161-87266180 | None:intergenic | 20.0% |
| !! | TTATGTTAAGGAAATGTTAA+AGG | - | chr3_1:87266162-87266181 | None:intergenic | 20.0% |
| !!! | AAATTGCCTTTGATTTTTAA+AGG | - | chr3_1:87266198-87266217 | None:intergenic | 20.0% |
| !!! | ATAATTTTTTACATTTGGGA+CGG | + | chr3_1:87266299-87266318 | Msa0384170:intron | 20.0% |
| ! | ATTCTTTACTATTTGATGCA+AGG | - | chr3_1:87265657-87265676 | None:intergenic | 25.0% |
| ! | AAATATAACAGAGACAATGA+AGG | + | chr3_1:87265786-87265805 | Msa0384170:CDS | 25.0% |
| ! | ATATGAGAATAGGGTATATA+GGG | - | chr3_1:87265965-87265984 | None:intergenic | 25.0% |
| ! | TATATGAGAATAGGGTATAT+AGG | - | chr3_1:87265966-87265985 | None:intergenic | 25.0% |
| ! | GCAACTAAATCATTATGTTA+AGG | - | chr3_1:87266174-87266193 | None:intergenic | 25.0% |
| !! | CAAAGGCAATTTTTATAACA+TGG | + | chr3_1:87266206-87266225 | Msa0384170:intron | 25.0% |
| !!! | TAATTTTTTACATTTGGGAC+GGG | + | chr3_1:87266300-87266319 | Msa0384170:intron | 25.0% |
| ! | ATTCTTTACTATTTGATGCA+AGG | - | chr3_1:87265657-87265676 | None:intergenic | 25.0% |
| ! | AAATATAACAGAGACAATGA+AGG | + | chr3_1:87265786-87265805 | Msa0384170:CDS | 25.0% |
| ! | ATATGAGAATAGGGTATATA+GGG | - | chr3_1:87265965-87265984 | None:intergenic | 25.0% |
| ! | TATATGAGAATAGGGTATAT+AGG | - | chr3_1:87265966-87265985 | None:intergenic | 25.0% |
| ! | GCAACTAAATCATTATGTTA+AGG | - | chr3_1:87266174-87266193 | None:intergenic | 25.0% |
| !! | CAAAGGCAATTTTTATAACA+TGG | + | chr3_1:87266206-87266225 | Msa0384170:intron | 25.0% |
| !!! | TAATTTTTTACATTTGGGAC+GGG | + | chr3_1:87266300-87266319 | Msa0384170:intron | 25.0% |
| TAATTCCAACATTTGTGTTC+TGG | + | chr3_1:87265572-87265591 | Msa0384170:CDS | 30.0% | |
| AATTCCAACATTTGTGTTCT+GGG | + | chr3_1:87265573-87265592 | Msa0384170:CDS | 30.0% | |
| TTTACTATTTGATGCAAGGT+CGG | - | chr3_1:87265653-87265672 | None:intergenic | 30.0% | |
| !! | TGTATCAATTTTGGTGAACA+AGG | - | chr3_1:87265707-87265726 | None:intergenic | 30.0% |
| TGTTATATTTCCTGCAAAGT+AGG | - | chr3_1:87265776-87265795 | None:intergenic | 30.0% | |
| ATGAAGGTAAGAAGAATGAT+CGG | + | chr3_1:87265802-87265821 | Msa0384170:intron | 30.0% | |
| TGCTTTACAAAATTGCCATT+GGG | - | chr3_1:87266131-87266150 | None:intergenic | 30.0% | |
| ATGCTTTACAAAATTGCCAT+TGG | - | chr3_1:87266132-87266151 | None:intergenic | 30.0% | |
| ! | GTTGCTCCTTTAAAAATCAA+AGG | + | chr3_1:87266189-87266208 | Msa0384170:intron | 30.0% |
| CTAGATCATGTTACGTTATT+TGG | - | chr3_1:87266243-87266262 | None:intergenic | 30.0% | |
| CAAATAACGTAACATGATCT+AGG | + | chr3_1:87266241-87266260 | Msa0384170:intron | 30.0% | |
| !!! | TTTTCCCCGATTTTAAAACA+CGG | - | chr3_1:87266378-87266397 | None:intergenic | 30.0% |
| TGGCAATGGTAATAATGATA+CGG | - | chr3_1:87266508-87266527 | None:intergenic | 30.0% | |
| TAATTCCAACATTTGTGTTC+TGG | + | chr3_1:87265572-87265591 | Msa0384170:CDS | 30.0% | |
| AATTCCAACATTTGTGTTCT+GGG | + | chr3_1:87265573-87265592 | Msa0384170:CDS | 30.0% | |
| TTTACTATTTGATGCAAGGT+CGG | - | chr3_1:87265653-87265672 | None:intergenic | 30.0% | |
| !! | TGTATCAATTTTGGTGAACA+AGG | - | chr3_1:87265707-87265726 | None:intergenic | 30.0% |
| TGTTATATTTCCTGCAAAGT+AGG | - | chr3_1:87265776-87265795 | None:intergenic | 30.0% | |
| ATGAAGGTAAGAAGAATGAT+CGG | + | chr3_1:87265802-87265821 | Msa0384170:intron | 30.0% | |
| TGCTTTACAAAATTGCCATT+GGG | - | chr3_1:87266131-87266150 | None:intergenic | 30.0% | |
| ATGCTTTACAAAATTGCCAT+TGG | - | chr3_1:87266132-87266151 | None:intergenic | 30.0% | |
| ! | GTTGCTCCTTTAAAAATCAA+AGG | + | chr3_1:87266189-87266208 | Msa0384170:intron | 30.0% |
| CTAGATCATGTTACGTTATT+TGG | - | chr3_1:87266243-87266262 | None:intergenic | 30.0% | |
| CAAATAACGTAACATGATCT+AGG | + | chr3_1:87266241-87266260 | Msa0384170:intron | 30.0% | |
| !!! | TTTTCCCCGATTTTAAAACA+CGG | - | chr3_1:87266378-87266397 | None:intergenic | 30.0% |
| TGGCAATGGTAATAATGATA+CGG | - | chr3_1:87266508-87266527 | None:intergenic | 30.0% | |
| ! | GTGTTGGTGTGATTATTGTA+AGG | - | chr3_1:87265603-87265622 | None:intergenic | 35.0% |
| AGTAGGACACAGAGATTAAT+TGG | - | chr3_1:87265759-87265778 | None:intergenic | 35.0% | |
| TGAAGGTAAGAAGAATGATC+GGG | + | chr3_1:87265803-87265822 | Msa0384170:intron | 35.0% | |
| AGAATAGGGTATATAGGGAT+GGG | - | chr3_1:87265960-87265979 | None:intergenic | 35.0% | |
| CGGGTAAGTATATGAGAATA+GGG | - | chr3_1:87265974-87265993 | None:intergenic | 35.0% | |
| ACGGGTAAGTATATGAGAAT+AGG | - | chr3_1:87265975-87265994 | None:intergenic | 35.0% | |
| AAAATAATTCACTGCGGGTA+CGG | - | chr3_1:87266078-87266097 | None:intergenic | 35.0% | |
| !!! | TCTTTTTTTTCCAACCCCAA+TGG | + | chr3_1:87266113-87266132 | Msa0384170:intron | 35.0% |
| GCTTTACAAAATTGCCATTG+GGG | - | chr3_1:87266130-87266149 | None:intergenic | 35.0% | |
| !!! | CGATTTTAAAACACGGGTAT+GGG | - | chr3_1:87266371-87266390 | None:intergenic | 35.0% |
| !!! | CCATACCCGTGTTTTAAAAT+CGG | + | chr3_1:87266369-87266388 | Msa0384170:intron | 35.0% |
| !!! | CATACCCGTGTTTTAAAATC+GGG | + | chr3_1:87266370-87266389 | Msa0384170:intron | 35.0% |
| !!! | ATACCCGTGTTTTAAAATCG+GGG | + | chr3_1:87266371-87266390 | Msa0384170:intron | 35.0% |
| !!! | TTTCCCCGATTTTAAAACAC+GGG | - | chr3_1:87266377-87266396 | None:intergenic | 35.0% |
| TGATTATGATGCGATTGTGA+TGG | - | chr3_1:87266534-87266553 | None:intergenic | 35.0% | |
| !! | TTGTACTTTGGAAGCATCAT+CGG | - | chr3_1:87266589-87266608 | None:intergenic | 35.0% |
| !! | TTTGACTTGGACTTGTACTT+TGG | - | chr3_1:87266601-87266620 | None:intergenic | 35.0% |
| ! | CTCATGTATCTTGTTTGACT+TGG | - | chr3_1:87266614-87266633 | None:intergenic | 35.0% |
| ! | GTGTTGGTGTGATTATTGTA+AGG | - | chr3_1:87265603-87265622 | None:intergenic | 35.0% |
| AGTAGGACACAGAGATTAAT+TGG | - | chr3_1:87265759-87265778 | None:intergenic | 35.0% | |
| TGAAGGTAAGAAGAATGATC+GGG | + | chr3_1:87265803-87265822 | Msa0384170:intron | 35.0% | |
| AGAATAGGGTATATAGGGAT+GGG | - | chr3_1:87265960-87265979 | None:intergenic | 35.0% | |
| CGGGTAAGTATATGAGAATA+GGG | - | chr3_1:87265974-87265993 | None:intergenic | 35.0% | |
| ACGGGTAAGTATATGAGAAT+AGG | - | chr3_1:87265975-87265994 | None:intergenic | 35.0% | |
| AAAATAATTCACTGCGGGTA+CGG | - | chr3_1:87266078-87266097 | None:intergenic | 35.0% | |
| !!! | TCTTTTTTTTCCAACCCCAA+TGG | + | chr3_1:87266113-87266132 | Msa0384170:intron | 35.0% |
| GCTTTACAAAATTGCCATTG+GGG | - | chr3_1:87266130-87266149 | None:intergenic | 35.0% | |
| !!! | CGATTTTAAAACACGGGTAT+GGG | - | chr3_1:87266371-87266390 | None:intergenic | 35.0% |
| !!! | CCATACCCGTGTTTTAAAAT+CGG | + | chr3_1:87266369-87266388 | Msa0384170:intron | 35.0% |
| !!! | CATACCCGTGTTTTAAAATC+GGG | + | chr3_1:87266370-87266389 | Msa0384170:intron | 35.0% |
| !!! | ATACCCGTGTTTTAAAATCG+GGG | + | chr3_1:87266371-87266390 | Msa0384170:intron | 35.0% |
| !!! | TTTCCCCGATTTTAAAACAC+GGG | - | chr3_1:87266377-87266396 | None:intergenic | 35.0% |
| TGATTATGATGCGATTGTGA+TGG | - | chr3_1:87266534-87266553 | None:intergenic | 35.0% | |
| !! | TTGTACTTTGGAAGCATCAT+CGG | - | chr3_1:87266589-87266608 | None:intergenic | 35.0% |
| !! | TTTGACTTGGACTTGTACTT+TGG | - | chr3_1:87266601-87266620 | None:intergenic | 35.0% |
| ! | CTCATGTATCTTGTTTGACT+TGG | - | chr3_1:87266614-87266633 | None:intergenic | 35.0% |
| AAAGCCCAGAACACAAATGT+TGG | - | chr3_1:87265580-87265599 | None:intergenic | 40.0% | |
| TCGGACAAGAGAATTAGTGT+TGG | - | chr3_1:87265619-87265638 | None:intergenic | 40.0% | |
| !! | AAGGTCGGCTTTTGAATTCT+CGG | - | chr3_1:87265638-87265657 | None:intergenic | 40.0% |
| GAATAGGGTATATAGGGATG+GGG | - | chr3_1:87265959-87265978 | None:intergenic | 40.0% | |
| GAGAATAGGGTATATAGGGA+TGG | - | chr3_1:87265961-87265980 | None:intergenic | 40.0% | |
| AAATAATTCACTGCGGGTAC+GGG | - | chr3_1:87266077-87266096 | None:intergenic | 40.0% | |
| TACAAAATTGCCATTGGGGT+TGG | - | chr3_1:87266126-87266145 | None:intergenic | 40.0% | |
| !! | TTTTACATTTGGGACGGGTA+TGG | + | chr3_1:87266305-87266324 | Msa0384170:intron | 40.0% |
| ! | TTTACATTTGGGACGGGTAT+GGG | + | chr3_1:87266306-87266325 | Msa0384170:intron | 40.0% |
| ! | TTTAAAACACGGGTATGGGA+CGG | - | chr3_1:87266367-87266386 | None:intergenic | 40.0% |
| !!! | CCGATTTTAAAACACGGGTA+TGG | - | chr3_1:87266372-87266391 | None:intergenic | 40.0% |
| AAAGCCCAGAACACAAATGT+TGG | - | chr3_1:87265580-87265599 | None:intergenic | 40.0% | |
| TCGGACAAGAGAATTAGTGT+TGG | - | chr3_1:87265619-87265638 | None:intergenic | 40.0% | |
| !! | AAGGTCGGCTTTTGAATTCT+CGG | - | chr3_1:87265638-87265657 | None:intergenic | 40.0% |
| GAATAGGGTATATAGGGATG+GGG | - | chr3_1:87265959-87265978 | None:intergenic | 40.0% | |
| GAGAATAGGGTATATAGGGA+TGG | - | chr3_1:87265961-87265980 | None:intergenic | 40.0% | |
| AAATAATTCACTGCGGGTAC+GGG | - | chr3_1:87266077-87266096 | None:intergenic | 40.0% | |
| TACAAAATTGCCATTGGGGT+TGG | - | chr3_1:87266126-87266145 | None:intergenic | 40.0% | |
| !! | TTTTACATTTGGGACGGGTA+TGG | + | chr3_1:87266305-87266324 | Msa0384170:intron | 40.0% |
| ! | TTTACATTTGGGACGGGTAT+GGG | + | chr3_1:87266306-87266325 | Msa0384170:intron | 40.0% |
| ! | TTTAAAACACGGGTATGGGA+CGG | - | chr3_1:87266367-87266386 | None:intergenic | 40.0% |
| !!! | CCGATTTTAAAACACGGGTA+TGG | - | chr3_1:87266372-87266391 | None:intergenic | 40.0% |
| ATCTCTGTGTCCTACTTTGC+AGG | + | chr3_1:87265763-87265782 | Msa0384170:CDS | 45.0% | |
| TTCGATTTCTCATCCCCGTT+GGG | - | chr3_1:87266011-87266030 | None:intergenic | 45.0% | |
| AATAATTCACTGCGGGTACG+GGG | - | chr3_1:87266076-87266095 | None:intergenic | 45.0% | |
| TTAAAACACGGGTATGGGAC+GGG | - | chr3_1:87266366-87266385 | None:intergenic | 45.0% | |
| CTTTGACTGGGTTTGGGTAT+GGG | - | chr3_1:87266407-87266426 | None:intergenic | 45.0% | |
| ATACCCAAACCCAGTCAAAG+CGG | + | chr3_1:87266407-87266426 | Msa0384170:intron | 45.0% | |
| ! | GATTGTGATGGAGTTGGCAA+TGG | - | chr3_1:87266522-87266541 | None:intergenic | 45.0% |
| ! | TGATGCGATTGTGATGGAGT+TGG | - | chr3_1:87266528-87266547 | None:intergenic | 45.0% |
| !! | TACTTTGGAAGCATCATCGG+TGG | - | chr3_1:87266586-87266605 | None:intergenic | 45.0% |
| ATCTCTGTGTCCTACTTTGC+AGG | + | chr3_1:87265763-87265782 | Msa0384170:CDS | 45.0% | |
| TTCGATTTCTCATCCCCGTT+GGG | - | chr3_1:87266011-87266030 | None:intergenic | 45.0% | |
| AATAATTCACTGCGGGTACG+GGG | - | chr3_1:87266076-87266095 | None:intergenic | 45.0% | |
| TTAAAACACGGGTATGGGAC+GGG | - | chr3_1:87266366-87266385 | None:intergenic | 45.0% | |
| CTTTGACTGGGTTTGGGTAT+GGG | - | chr3_1:87266407-87266426 | None:intergenic | 45.0% | |
| ATACCCAAACCCAGTCAAAG+CGG | + | chr3_1:87266407-87266426 | Msa0384170:intron | 45.0% | |
| ! | GATTGTGATGGAGTTGGCAA+TGG | - | chr3_1:87266522-87266541 | None:intergenic | 45.0% |
| ! | TGATGCGATTGTGATGGAGT+TGG | - | chr3_1:87266528-87266547 | None:intergenic | 45.0% |
| !! | TACTTTGGAAGCATCATCGG+TGG | - | chr3_1:87266586-87266605 | None:intergenic | 45.0% |
| !!! | AAAAAATAATTTTTTACATT+TGG | + | chr3_1:87266294-87266313 | Msa0384170:intron | 5.0% |
| !!! | AAAAATAATTTTTTACATTT+GGG | + | chr3_1:87266295-87266314 | Msa0384170:intron | 5.0% |
| !!! | AAAAAATAATTTTTTACATT+TGG | + | chr3_1:87266294-87266313 | Msa0384170:intron | 5.0% |
| !!! | AAAAATAATTTTTTACATTT+GGG | + | chr3_1:87266295-87266314 | Msa0384170:intron | 5.0% |
| !! | TCTACAACCACTGACTTGGC+AGG | - | chr3_1:87265865-87265884 | None:intergenic | 50.0% |
| ! | CTGCTCTACAACCACTGACT+TGG | - | chr3_1:87265869-87265888 | None:intergenic | 50.0% |
| CAAGTCAGTGGTTGTAGAGC+AGG | + | chr3_1:87265867-87265886 | Msa0384170:intron | 50.0% | |
| CTGCAACTAGGCATGGCAAT+GGG | + | chr3_1:87265908-87265927 | Msa0384170:intron | 50.0% | |
| TGCAACTAGGCATGGCAATG+GGG | + | chr3_1:87265909-87265928 | Msa0384170:intron | 50.0% | |
| AGGGTATATAGGGATGGGGA+AGG | - | chr3_1:87265955-87265974 | None:intergenic | 50.0% | |
| TTGGGTATGGGTAGGGTAAC+GGG | - | chr3_1:87265993-87266012 | None:intergenic | 50.0% | |
| GTTGGGTATGGGTAGGGTAA+CGG | - | chr3_1:87265994-87266013 | None:intergenic | 50.0% | |
| GTTACCCTACCCATACCCAA+CGG | + | chr3_1:87265993-87266012 | Msa0384170:intron | 50.0% | |
| TTACCCTACCCATACCCAAC+GGG | + | chr3_1:87265994-87266013 | Msa0384170:intron | 50.0% | |
| TTCTCATCCCCGTTGGGTAT+GGG | - | chr3_1:87266005-87266024 | None:intergenic | 50.0% | |
| TTTCTCATCCCCGTTGGGTA+TGG | - | chr3_1:87266006-87266025 | None:intergenic | 50.0% | |
| GTTCGATTTCTCATCCCCGT+TGG | - | chr3_1:87266012-87266031 | None:intergenic | 50.0% | |
| ! | ATTTGGGACGGGTATGGGTA+TGG | + | chr3_1:87266311-87266330 | Msa0384170:intron | 50.0% |
| ! | TTTGGGACGGGTATGGGTAT+GGG | + | chr3_1:87266312-87266331 | Msa0384170:intron | 50.0% |
| CTGGGTTTGGGTATGGGTTT+GGG | - | chr3_1:87266401-87266420 | None:intergenic | 50.0% | |
| ACTGGGTTTGGGTATGGGTT+TGG | - | chr3_1:87266402-87266421 | None:intergenic | 50.0% | |
| GCTTTGACTGGGTTTGGGTA+TGG | - | chr3_1:87266408-87266427 | None:intergenic | 50.0% | |
| TACCCAAACCCAGTCAAAGC+GGG | + | chr3_1:87266408-87266427 | Msa0384170:intron | 50.0% | |
| AAAACCCGTCAAATCGGGGT+GGG | + | chr3_1:87266432-87266451 | Msa0384170:intron | 50.0% | |
| GATACGGTTGCAGCTAGACA+TGG | - | chr3_1:87266492-87266511 | None:intergenic | 50.0% | |
| !! | TCTACAACCACTGACTTGGC+AGG | - | chr3_1:87265865-87265884 | None:intergenic | 50.0% |
| ! | CTGCTCTACAACCACTGACT+TGG | - | chr3_1:87265869-87265888 | None:intergenic | 50.0% |
| CAAGTCAGTGGTTGTAGAGC+AGG | + | chr3_1:87265867-87265886 | Msa0384170:intron | 50.0% | |
| CTGCAACTAGGCATGGCAAT+GGG | + | chr3_1:87265908-87265927 | Msa0384170:intron | 50.0% | |
| TGCAACTAGGCATGGCAATG+GGG | + | chr3_1:87265909-87265928 | Msa0384170:intron | 50.0% | |
| AGGGTATATAGGGATGGGGA+AGG | - | chr3_1:87265955-87265974 | None:intergenic | 50.0% | |
| TTGGGTATGGGTAGGGTAAC+GGG | - | chr3_1:87265993-87266012 | None:intergenic | 50.0% | |
| GTTGGGTATGGGTAGGGTAA+CGG | - | chr3_1:87265994-87266013 | None:intergenic | 50.0% | |
| GTTACCCTACCCATACCCAA+CGG | + | chr3_1:87265993-87266012 | Msa0384170:intron | 50.0% | |
| TTACCCTACCCATACCCAAC+GGG | + | chr3_1:87265994-87266013 | Msa0384170:intron | 50.0% | |
| TTCTCATCCCCGTTGGGTAT+GGG | - | chr3_1:87266005-87266024 | None:intergenic | 50.0% | |
| TTTCTCATCCCCGTTGGGTA+TGG | - | chr3_1:87266006-87266025 | None:intergenic | 50.0% | |
| GTTCGATTTCTCATCCCCGT+TGG | - | chr3_1:87266012-87266031 | None:intergenic | 50.0% | |
| ! | ATTTGGGACGGGTATGGGTA+TGG | + | chr3_1:87266311-87266330 | Msa0384170:intron | 50.0% |
| ! | TTTGGGACGGGTATGGGTAT+GGG | + | chr3_1:87266312-87266331 | Msa0384170:intron | 50.0% |
| CTGGGTTTGGGTATGGGTTT+GGG | - | chr3_1:87266401-87266420 | None:intergenic | 50.0% | |
| ACTGGGTTTGGGTATGGGTT+TGG | - | chr3_1:87266402-87266421 | None:intergenic | 50.0% | |
| GCTTTGACTGGGTTTGGGTA+TGG | - | chr3_1:87266408-87266427 | None:intergenic | 50.0% | |
| TACCCAAACCCAGTCAAAGC+GGG | + | chr3_1:87266408-87266427 | Msa0384170:intron | 50.0% | |
| AAAACCCGTCAAATCGGGGT+GGG | + | chr3_1:87266432-87266451 | Msa0384170:intron | 50.0% | |
| GATACGGTTGCAGCTAGACA+TGG | - | chr3_1:87266492-87266511 | None:intergenic | 50.0% | |
| !! | ACAACCACTGACTTGGCAGG+TGG | - | chr3_1:87265862-87265881 | None:intergenic | 55.0% |
| TTGCCATGCCTAGTTGCAGC+TGG | - | chr3_1:87265907-87265926 | None:intergenic | 55.0% | |
| GCTGCAACTAGGCATGGCAA+TGG | + | chr3_1:87265907-87265926 | Msa0384170:intron | 55.0% | |
| AACTAGGCATGGCAATGGGG+CGG | + | chr3_1:87265912-87265931 | Msa0384170:intron | 55.0% | |
| TACCCTACCCATACCCAACG+GGG | + | chr3_1:87265995-87266014 | Msa0384170:intron | 55.0% | |
| ATCCCCGTTGGGTATGGGTA+GGG | - | chr3_1:87266000-87266019 | None:intergenic | 55.0% | |
| GACGGGTATGGGTATGGGTT+CGG | + | chr3_1:87266317-87266336 | Msa0384170:intron | 55.0% | |
| ACGGGTATGGGTATGGGTTC+GGG | + | chr3_1:87266318-87266337 | Msa0384170:intron | 55.0% | |
| TATGGGTATGGGTTCGGGGT+GGG | + | chr3_1:87266323-87266342 | Msa0384170:intron | 55.0% | |
| ACCCAAACCCAGTCAAAGCG+GGG | + | chr3_1:87266409-87266428 | Msa0384170:intron | 55.0% | |
| TCCCCGCTTTGACTGGGTTT+GGG | - | chr3_1:87266413-87266432 | None:intergenic | 55.0% | |
| TTCCCCGCTTTGACTGGGTT+TGG | - | chr3_1:87266414-87266433 | None:intergenic | 55.0% | |
| ! | GGGTTTTCCCCGCTTTGACT+GGG | - | chr3_1:87266419-87266438 | None:intergenic | 55.0% |
| GCGGGGAAAACCCGTCAAAT+CGG | + | chr3_1:87266426-87266445 | Msa0384170:intron | 55.0% | |
| CGGGGAAAACCCGTCAAATC+GGG | + | chr3_1:87266427-87266446 | Msa0384170:intron | 55.0% | |
| GGGGAAAACCCGTCAAATCG+GGG | + | chr3_1:87266428-87266447 | Msa0384170:intron | 55.0% | |
| GAAAACCCGTCAAATCGGGG+TGG | + | chr3_1:87266431-87266450 | Msa0384170:intron | 55.0% | |
| ! | CAAACCCACCCCGATTTGAC+GGG | - | chr3_1:87266439-87266458 | None:intergenic | 55.0% |
| ! | CCAAACCCACCCCGATTTGA+CGG | - | chr3_1:87266440-87266459 | None:intergenic | 55.0% |
| ! | CGTCAAATCGGGGTGGGTTT+GGG | + | chr3_1:87266438-87266457 | Msa0384170:intron | 55.0% |
| GCAACAATACCCGTCCCCAT+GGG | - | chr3_1:87266470-87266489 | None:intergenic | 55.0% | |
| !! | ACAACCACTGACTTGGCAGG+TGG | - | chr3_1:87265862-87265881 | None:intergenic | 55.0% |
| TTGCCATGCCTAGTTGCAGC+TGG | - | chr3_1:87265907-87265926 | None:intergenic | 55.0% | |
| GCTGCAACTAGGCATGGCAA+TGG | + | chr3_1:87265907-87265926 | Msa0384170:intron | 55.0% | |
| AACTAGGCATGGCAATGGGG+CGG | + | chr3_1:87265912-87265931 | Msa0384170:intron | 55.0% | |
| TACCCTACCCATACCCAACG+GGG | + | chr3_1:87265995-87266014 | Msa0384170:intron | 55.0% | |
| ATCCCCGTTGGGTATGGGTA+GGG | - | chr3_1:87266000-87266019 | None:intergenic | 55.0% | |
| GACGGGTATGGGTATGGGTT+CGG | + | chr3_1:87266317-87266336 | Msa0384170:intron | 55.0% | |
| ACGGGTATGGGTATGGGTTC+GGG | + | chr3_1:87266318-87266337 | Msa0384170:intron | 55.0% | |
| TATGGGTATGGGTTCGGGGT+GGG | + | chr3_1:87266323-87266342 | Msa0384170:intron | 55.0% | |
| ACCCAAACCCAGTCAAAGCG+GGG | + | chr3_1:87266409-87266428 | Msa0384170:intron | 55.0% | |
| TCCCCGCTTTGACTGGGTTT+GGG | - | chr3_1:87266413-87266432 | None:intergenic | 55.0% | |
| TTCCCCGCTTTGACTGGGTT+TGG | - | chr3_1:87266414-87266433 | None:intergenic | 55.0% | |
| ! | GGGTTTTCCCCGCTTTGACT+GGG | - | chr3_1:87266419-87266438 | None:intergenic | 55.0% |
| GCGGGGAAAACCCGTCAAAT+CGG | + | chr3_1:87266426-87266445 | Msa0384170:intron | 55.0% | |
| CGGGGAAAACCCGTCAAATC+GGG | + | chr3_1:87266427-87266446 | Msa0384170:intron | 55.0% | |
| GGGGAAAACCCGTCAAATCG+GGG | + | chr3_1:87266428-87266447 | Msa0384170:intron | 55.0% | |
| GAAAACCCGTCAAATCGGGG+TGG | + | chr3_1:87266431-87266450 | Msa0384170:intron | 55.0% | |
| ! | CAAACCCACCCCGATTTGAC+GGG | - | chr3_1:87266439-87266458 | None:intergenic | 55.0% |
| ! | CCAAACCCACCCCGATTTGA+CGG | - | chr3_1:87266440-87266459 | None:intergenic | 55.0% |
| ! | CGTCAAATCGGGGTGGGTTT+GGG | + | chr3_1:87266438-87266457 | Msa0384170:intron | 55.0% |
| GCAACAATACCCGTCCCCAT+GGG | - | chr3_1:87266470-87266489 | None:intergenic | 55.0% | |
| !! | ACCACTGACTTGGCAGGTGG+CGG | - | chr3_1:87265859-87265878 | None:intergenic | 60.0% |
| ! | CCTAGTTGCAGCTGGTGCTG+GGG | - | chr3_1:87265899-87265918 | None:intergenic | 60.0% |
| GCCTAGTTGCAGCTGGTGCT+GGG | - | chr3_1:87265900-87265919 | None:intergenic | 60.0% | |
| TGCCTAGTTGCAGCTGGTGC+TGG | - | chr3_1:87265901-87265920 | None:intergenic | 60.0% | |
| GCACCAGCTGCAACTAGGCA+TGG | + | chr3_1:87265901-87265920 | Msa0384170:intron | 60.0% | |
| ACTAGGCATGGCAATGGGGC+GGG | + | chr3_1:87265913-87265932 | Msa0384170:intron | 60.0% | |
| CATCCCCGTTGGGTATGGGT+AGG | - | chr3_1:87266001-87266020 | None:intergenic | 60.0% | |
| TTCACTGCGGGTACGGGGAT+GGG | - | chr3_1:87266071-87266090 | None:intergenic | 60.0% | |
| ATTCACTGCGGGTACGGGGA+TGG | - | chr3_1:87266072-87266091 | None:intergenic | 60.0% | |
| CGGGTATGGGTATGGGTTCG+GGG | + | chr3_1:87266319-87266338 | Msa0384170:intron | 60.0% | |
| GTATGGGTATGGGTTCGGGG+TGG | + | chr3_1:87266322-87266341 | Msa0384170:intron | 60.0% | |
| ACGGGTATGGGACGGGTAAC+GGG | - | chr3_1:87266359-87266378 | None:intergenic | 60.0% | |
| CACGGGTATGGGACGGGTAA+CGG | - | chr3_1:87266360-87266379 | None:intergenic | 60.0% | |
| ! | CGGGTTTTCCCCGCTTTGAC+TGG | - | chr3_1:87266420-87266439 | None:intergenic | 60.0% |
| ! | CCGTCAAATCGGGGTGGGTT+TGG | + | chr3_1:87266437-87266456 | Msa0384170:intron | 60.0% |
| ! | CAAATCGGGGTGGGTTTGGG+CGG | + | chr3_1:87266441-87266460 | Msa0384170:intron | 60.0% |
| ! | AAATCGGGGTGGGTTTGGGC+GGG | + | chr3_1:87266442-87266461 | Msa0384170:intron | 60.0% |
| GGCAACAATACCCGTCCCCA+TGG | - | chr3_1:87266471-87266490 | None:intergenic | 60.0% | |
| !! | ACCACTGACTTGGCAGGTGG+CGG | - | chr3_1:87265859-87265878 | None:intergenic | 60.0% |
| ! | CCTAGTTGCAGCTGGTGCTG+GGG | - | chr3_1:87265899-87265918 | None:intergenic | 60.0% |
| GCCTAGTTGCAGCTGGTGCT+GGG | - | chr3_1:87265900-87265919 | None:intergenic | 60.0% | |
| TGCCTAGTTGCAGCTGGTGC+TGG | - | chr3_1:87265901-87265920 | None:intergenic | 60.0% | |
| GCACCAGCTGCAACTAGGCA+TGG | + | chr3_1:87265901-87265920 | Msa0384170:intron | 60.0% | |
| ACTAGGCATGGCAATGGGGC+GGG | + | chr3_1:87265913-87265932 | Msa0384170:intron | 60.0% | |
| CATCCCCGTTGGGTATGGGT+AGG | - | chr3_1:87266001-87266020 | None:intergenic | 60.0% | |
| TTCACTGCGGGTACGGGGAT+GGG | - | chr3_1:87266071-87266090 | None:intergenic | 60.0% | |
| ATTCACTGCGGGTACGGGGA+TGG | - | chr3_1:87266072-87266091 | None:intergenic | 60.0% | |
| CGGGTATGGGTATGGGTTCG+GGG | + | chr3_1:87266319-87266338 | Msa0384170:intron | 60.0% | |
| GTATGGGTATGGGTTCGGGG+TGG | + | chr3_1:87266322-87266341 | Msa0384170:intron | 60.0% | |
| ACGGGTATGGGACGGGTAAC+GGG | - | chr3_1:87266359-87266378 | None:intergenic | 60.0% | |
| CACGGGTATGGGACGGGTAA+CGG | - | chr3_1:87266360-87266379 | None:intergenic | 60.0% | |
| ! | CGGGTTTTCCCCGCTTTGAC+TGG | - | chr3_1:87266420-87266439 | None:intergenic | 60.0% |
| ! | CCGTCAAATCGGGGTGGGTT+TGG | + | chr3_1:87266437-87266456 | Msa0384170:intron | 60.0% |
| ! | CAAATCGGGGTGGGTTTGGG+CGG | + | chr3_1:87266441-87266460 | Msa0384170:intron | 60.0% |
| ! | AAATCGGGGTGGGTTTGGGC+GGG | + | chr3_1:87266442-87266461 | Msa0384170:intron | 60.0% |
| GGCAACAATACCCGTCCCCA+TGG | - | chr3_1:87266471-87266490 | None:intergenic | 60.0% | |
| ACCGCCACCTGCCAAGTCAG+TGG | + | chr3_1:87265855-87265874 | Msa0384170:intron | 65.0% | |
| CCCCAGCACCAGCTGCAACT+AGG | + | chr3_1:87265896-87265915 | Msa0384170:intron | 65.0% | |
| CTAGGCATGGCAATGGGGCG+GGG | + | chr3_1:87265914-87265933 | Msa0384170:intron | 65.0% | |
| AACCCCATCCCCATCCCCGA+CGG | + | chr3_1:87266029-87266048 | Msa0384170:intron | 65.0% | |
| AACCCGTCGGGGATGGGGAT+GGG | - | chr3_1:87266035-87266054 | None:intergenic | 65.0% | |
| ! | ATCCCCATCCCCGACGGGTT+CGG | + | chr3_1:87266035-87266054 | Msa0384170:intron | 65.0% |
| ATGGGATCCCCGAACCCGTC+GGG | - | chr3_1:87266047-87266066 | None:intergenic | 65.0% | |
| GATGGGATCCCCGAACCCGT+CGG | - | chr3_1:87266048-87266067 | None:intergenic | 65.0% | |
| TCACTGCGGGTACGGGGATG+GGG | - | chr3_1:87266070-87266089 | None:intergenic | 65.0% | |
| CGGGTATGGGACGGGTAACG+GGG | - | chr3_1:87266358-87266377 | None:intergenic | 65.0% | |
| TGGGTTTGGGCGGGTACCCA+TGG | + | chr3_1:87266451-87266470 | Msa0384170:intron | 65.0% | |
| GGGTTTGGGCGGGTACCCAT+GGG | + | chr3_1:87266452-87266471 | Msa0384170:intron | 65.0% | |
| GGTTTGGGCGGGTACCCATG+GGG | + | chr3_1:87266453-87266472 | Msa0384170:intron | 65.0% | |
| ACCGCCACCTGCCAAGTCAG+TGG | + | chr3_1:87265855-87265874 | Msa0384170:intron | 65.0% | |
| CCCCAGCACCAGCTGCAACT+AGG | + | chr3_1:87265896-87265915 | Msa0384170:intron | 65.0% | |
| CTAGGCATGGCAATGGGGCG+GGG | + | chr3_1:87265914-87265933 | Msa0384170:intron | 65.0% | |
| AACCCCATCCCCATCCCCGA+CGG | + | chr3_1:87266029-87266048 | Msa0384170:intron | 65.0% | |
| AACCCGTCGGGGATGGGGAT+GGG | - | chr3_1:87266035-87266054 | None:intergenic | 65.0% | |
| ! | ATCCCCATCCCCGACGGGTT+CGG | + | chr3_1:87266035-87266054 | Msa0384170:intron | 65.0% |
| ATGGGATCCCCGAACCCGTC+GGG | - | chr3_1:87266047-87266066 | None:intergenic | 65.0% | |
| GATGGGATCCCCGAACCCGT+CGG | - | chr3_1:87266048-87266067 | None:intergenic | 65.0% | |
| TCACTGCGGGTACGGGGATG+GGG | - | chr3_1:87266070-87266089 | None:intergenic | 65.0% | |
| CGGGTATGGGACGGGTAACG+GGG | - | chr3_1:87266358-87266377 | None:intergenic | 65.0% | |
| TGGGTTTGGGCGGGTACCCA+TGG | + | chr3_1:87266451-87266470 | Msa0384170:intron | 65.0% | |
| GGGTTTGGGCGGGTACCCAT+GGG | + | chr3_1:87266452-87266471 | Msa0384170:intron | 65.0% | |
| GGTTTGGGCGGGTACCCATG+GGG | + | chr3_1:87266453-87266472 | Msa0384170:intron | 65.0% | |
| GCATGGCAATGGGGCGGGGT+GGG | + | chr3_1:87265918-87265937 | Msa0384170:intron | 70.0% | |
| CATGGCAATGGGGCGGGGTG+GGG | + | chr3_1:87265919-87265938 | Msa0384170:intron | 70.0% | |
| ACCCCATCCCCATCCCCGAC+GGG | + | chr3_1:87266030-87266049 | Msa0384170:intron | 70.0% | |
| ACCCGTCGGGGATGGGGATG+GGG | - | chr3_1:87266034-87266053 | None:intergenic | 70.0% | |
| GAACCCGTCGGGGATGGGGA+TGG | - | chr3_1:87266036-87266055 | None:intergenic | 70.0% | |
| ! | TCCCCATCCCCGACGGGTTC+GGG | + | chr3_1:87266036-87266055 | Msa0384170:intron | 70.0% |
| TCCCCGAACCCGTCGGGGAT+GGG | - | chr3_1:87266041-87266060 | None:intergenic | 70.0% | |
| ATCCCCGAACCCGTCGGGGA+TGG | - | chr3_1:87266042-87266061 | None:intergenic | 70.0% | |
| TGGGATCCCCGAACCCGTCG+GGG | - | chr3_1:87266046-87266065 | None:intergenic | 70.0% | |
| GCGGGTACGGGGATGGGGAT+GGG | - | chr3_1:87266065-87266084 | None:intergenic | 70.0% | |
| TGCGGGTACGGGGATGGGGA+TGG | - | chr3_1:87266066-87266085 | None:intergenic | 70.0% | |
| TGGGCGGGTACCCATGGGGA+CGG | + | chr3_1:87266457-87266476 | Msa0384170:intron | 70.0% | |
| GCATGGCAATGGGGCGGGGT+GGG | + | chr3_1:87265918-87265937 | Msa0384170:intron | 70.0% | |
| CATGGCAATGGGGCGGGGTG+GGG | + | chr3_1:87265919-87265938 | Msa0384170:intron | 70.0% | |
| ACCCCATCCCCATCCCCGAC+GGG | + | chr3_1:87266030-87266049 | Msa0384170:intron | 70.0% | |
| ACCCGTCGGGGATGGGGATG+GGG | - | chr3_1:87266034-87266053 | None:intergenic | 70.0% | |
| GAACCCGTCGGGGATGGGGA+TGG | - | chr3_1:87266036-87266055 | None:intergenic | 70.0% | |
| ! | TCCCCATCCCCGACGGGTTC+GGG | + | chr3_1:87266036-87266055 | Msa0384170:intron | 70.0% |
| TCCCCGAACCCGTCGGGGAT+GGG | - | chr3_1:87266041-87266060 | None:intergenic | 70.0% | |
| ATCCCCGAACCCGTCGGGGA+TGG | - | chr3_1:87266042-87266061 | None:intergenic | 70.0% | |
| TGGGATCCCCGAACCCGTCG+GGG | - | chr3_1:87266046-87266065 | None:intergenic | 70.0% | |
| GCGGGTACGGGGATGGGGAT+GGG | - | chr3_1:87266065-87266084 | None:intergenic | 70.0% | |
| TGCGGGTACGGGGATGGGGA+TGG | - | chr3_1:87266066-87266085 | None:intergenic | 70.0% | |
| TGGGCGGGTACCCATGGGGA+CGG | + | chr3_1:87266457-87266476 | Msa0384170:intron | 70.0% | |
| GGCATGGCAATGGGGCGGGG+TGG | + | chr3_1:87265917-87265936 | Msa0384170:intron | 75.0% | |
| GCAATGGGGCGGGGTGGGGA+CGG | + | chr3_1:87265923-87265942 | Msa0384170:intron | 75.0% | |
| CAATGGGGCGGGGTGGGGAC+GGG | + | chr3_1:87265924-87265943 | Msa0384170:intron | 75.0% | |
| CCCCGAACCCGTCGGGGATG+GGG | - | chr3_1:87266040-87266059 | None:intergenic | 75.0% | |
| ! | CCCCATCCCCGACGGGTTCG+GGG | + | chr3_1:87266037-87266056 | Msa0384170:intron | 75.0% |
| GGGCGGGTACCCATGGGGAC+GGG | + | chr3_1:87266458-87266477 | Msa0384170:intron | 75.0% | |
| GGCATGGCAATGGGGCGGGG+TGG | + | chr3_1:87265917-87265936 | Msa0384170:intron | 75.0% | |
| GCAATGGGGCGGGGTGGGGA+CGG | + | chr3_1:87265923-87265942 | Msa0384170:intron | 75.0% | |
| CAATGGGGCGGGGTGGGGAC+GGG | + | chr3_1:87265924-87265943 | Msa0384170:intron | 75.0% | |
| CCCCGAACCCGTCGGGGATG+GGG | - | chr3_1:87266040-87266059 | None:intergenic | 75.0% | |
| ! | CCCCATCCCCGACGGGTTCG+GGG | + | chr3_1:87266037-87266056 | Msa0384170:intron | 75.0% |
| GGGCGGGTACCCATGGGGAC+GGG | + | chr3_1:87266458-87266477 | Msa0384170:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 87265550 | 87266669 | 87265550 | ID=Msa0384170;Name=Msa0384170 |
| chr3_1 | mRNA | 87265550 | 87266669 | 87265550 | ID=Msa0384170-mRNA-1;Parent=Msa0384170;Name=Msa0384170-mRNA-1;_AED=0.22;_eAED=0.70;_QI=0|0|0|1|0|0|3|0|100 |
| chr3_1 | exon | 87265550 | 87265691 | 87265550 | ID=Msa0384170-mRNA-1:exon:23309;Parent=Msa0384170-mRNA-1 |
| chr3_1 | exon | 87265748 | 87265807 | 87265748 | ID=Msa0384170-mRNA-1:exon:23310;Parent=Msa0384170-mRNA-1 |
| chr3_1 | exon | 87266572 | 87266669 | 87266572 | ID=Msa0384170-mRNA-1:exon:23311;Parent=Msa0384170-mRNA-1 |
| chr3_1 | CDS | 87265550 | 87265691 | 87265550 | ID=Msa0384170-mRNA-1:cds;Parent=Msa0384170-mRNA-1 |
| chr3_1 | CDS | 87265748 | 87265807 | 87265748 | ID=Msa0384170-mRNA-1:cds;Parent=Msa0384170-mRNA-1 |
| chr3_1 | CDS | 87266572 | 87266669 | 87266572 | ID=Msa0384170-mRNA-1:cds;Parent=Msa0384170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
