AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0084190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0084190 MtrunA17_Chr1g0198441 89.819 442 15 1 402 813 1 442 0.0 792
Msa0084190 MtrunA17_Chr1g0198441 87.335 379 48 0 1 379 1 379 0.0 676
Msa0084190 MtrunA17_Chr1g0198451 97.361 379 10 0 1 379 1 379 0.0 746
Msa0084190 MtrunA17_Chr1g0198451 80.769 442 54 2 402 813 1 441 0.0 711
Msa0084190 MtrunA17_Chr1g0211401 35.979 378 232 3 10 379 4 379 8.35e-74 248
Msa0084190 MtrunA17_Chr1g0211401 35.038 391 244 3 411 793 4 392 1.97e-72 244
Msa0084190 MtrunA17_Chr3g0143461 33.898 354 218 2 64 406 3 351 5.03e-60 208
Msa0084190 MtrunA17_Chr3g0143461 33.432 338 214 2 465 791 3 340 4.91e-59 205
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0084190 AT5G42210.2 35.938 384 228 4 414 783 10 389 2.10e-75 251
Msa0084190 AT5G42210.2 35.279 377 234 2 13 379 10 386 1.84e-73 246
Msa0084190 AT5G42210.1 35.938 384 228 4 414 783 10 389 5.60e-75 251
Msa0084190 AT5G42210.1 35.279 377 234 2 13 379 10 386 5.38e-73 246
Msa0084190 AT2G16980.1 32.836 402 241 5 409 783 19 418 1.04e-61 214
Msa0084190 AT2G16980.1 32.828 396 241 3 8 378 19 414 7.23e-61 212
Msa0084190 AT2G16980.2 32.524 412 249 5 409 793 4 413 1.21e-61 215
Msa0084190 AT2G16980.2 32.828 396 241 3 8 378 4 399 1.79e-60 212
Msa0084190 AT2G16980.4 32.524 412 249 5 409 793 19 428 1.50e-61 216
Msa0084190 AT2G16980.4 32.828 396 241 3 8 378 19 414 2.65e-60 212
Msa0084190 AT2G16980.3 32.524 412 249 5 409 793 19 428 1.61e-61 216
Msa0084190 AT2G16980.3 32.828 396 241 3 8 378 19 414 3.10e-60 212
Msa0084190 AT2G16970.4 32.250 400 246 3 409 783 4 403 2.42e-60 210
Msa0084190 AT2G16970.4 31.818 396 245 3 8 378 4 399 2.12e-59 207
Msa0084190 AT2G16970.7 32.250 400 246 3 409 783 4 403 2.42e-60 210
Msa0084190 AT2G16970.7 31.818 396 245 3 8 378 4 399 2.12e-59 207
Msa0084190 AT2G16970.2 32.108 408 252 3 409 791 4 411 6.86e-60 211
Msa0084190 AT2G16970.2 31.818 396 245 3 8 378 4 399 1.18e-58 207
Msa0084190 AT2G16970.3 32.250 400 246 3 409 783 4 403 6.97e-60 210
Msa0084190 AT2G16970.3 31.818 396 245 3 8 378 4 399 5.09e-59 207
Msa0084190 AT2G16980.5 30.698 430 241 6 409 783 19 446 7.39e-57 202
Msa0084190 AT2G16980.5 30.660 424 241 4 8 378 19 442 5.06e-56 199
Msa0084190 AT2G16990.4 30.808 396 244 6 414 783 8 399 3.91e-56 198
Msa0084190 AT2G16990.4 29.639 388 251 2 13 378 8 395 3.77e-54 193
Msa0084190 AT2G16990.6 30.808 396 244 6 414 783 8 399 3.91e-56 198
Msa0084190 AT2G16990.6 29.639 388 251 2 13 378 8 395 3.77e-54 193
Msa0084190 AT2G16990.7 30.542 406 252 6 414 793 8 409 5.16e-56 199
Msa0084190 AT2G16990.7 29.639 388 251 2 13 378 8 395 1.35e-53 192
Msa0084190 AT2G16990.1 30.542 406 252 6 414 793 8 409 6.60e-56 199
Msa0084190 AT2G16990.1 29.639 388 251 2 13 378 8 395 1.79e-53 192
Msa0084190 AT2G16990.2 30.542 406 252 6 414 793 8 409 6.60e-56 199
Msa0084190 AT2G16990.2 29.639 388 251 2 13 378 8 395 1.79e-53 192
Msa0084190 AT2G16970.6 31.300 377 234 3 8 359 4 380 1.13e-53 191
Msa0084190 AT2G16970.6 32.759 348 209 3 409 731 4 351 2.94e-53 190
Msa0084190 AT2G16970.8 32.759 348 209 3 409 731 4 351 2.33e-53 190
Msa0084190 AT2G16970.8 32.184 348 211 3 8 330 4 351 6.70e-52 186
Msa0084190 AT2G16970.1 32.759 348 209 3 409 731 4 351 3.40e-53 190
Msa0084190 AT2G16970.1 32.184 348 211 3 8 330 4 351 9.44e-52 186
Msa0084190 AT2G16990.3 31.232 349 212 5 414 736 8 354 1.55e-47 174
Msa0084190 AT2G16990.3 28.994 338 218 2 13 328 8 345 3.18e-44 165
Msa0084190 AT2G16990.5 31.232 349 212 5 414 736 8 354 1.55e-47 174
Msa0084190 AT2G16990.5 28.994 338 218 2 13 328 8 345 3.18e-44 165
Msa0084190 AT2G16990.8 29.557 406 229 7 414 793 8 382 3.22e-46 171
Msa0084190 AT2G16990.8 28.608 388 228 3 13 378 8 368 4.52e-44 165
Msa0084190 AT2G16980.6 31.673 281 168 2 122 378 1 281 2.51e-33 132
Msa0084190 AT2G16980.6 30.303 297 179 4 523 793 1 295 5.11e-33 131
Msa0084190 AT2G16970.5 35.882 170 108 1 409 577 4 173 1.24e-27 115
Msa0084190 AT2G16970.5 34.706 170 110 1 8 176 4 173 1.39e-26 112
Msa0084190 AT2G16970.5 37.097 124 78 0 255 378 169 292 1.43e-18 88.6
Msa0084190 AT2G16970.5 33.117 154 103 0 638 791 151 304 5.48e-18 87.0

Find 148 sgRNAs with CRISPR-Local

Find 489 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGTGTAGGCTTGGCTTTC+TGG 0.046732 1_2:-63486989 Msa0084190:intron
TTGGTGTAGGCTTGGCTTTC+TGG 0.046732 1_2:-63492951 Msa0084190:intron
TCCAAAGCCATTTACATTAA+TGG 0.151907 1_2:-63494835 Msa0084190:CDS
TTGAAGACCATTAATGTAAA+TGG 0.184689 1_2:+63494828 None:intergenic
TTTCTTTCCTTCTAGATTAC+TGG 0.206606 1_2:-63488569 Msa0084190:intron
TCTTCTGCTGCACATGTTAT+TGG 0.211223 1_2:-63487994 Msa0084190:CDS
GATGGTGGTACTTCCACTTT+TGG 0.225106 1_2:-63488537 Msa0084190:CDS
AACAAAAGGGCAGCAGTATT+TGG 0.253401 1_2:-63494133 Msa0084190:CDS
GCTGGGGCAAATTCAATATC+TGG 0.260798 1_2:-63486443 Msa0084190:CDS
GATGATGGTACTTCCAATAT+TGG 0.263930 1_2:-63494699 Msa0084190:CDS
ACTTGCTTGGAATCAATCTA+AGG 0.285147 1_2:-63488247 Msa0084190:CDS
CCAAATGAGGCACTTAAATA+TGG 0.298481 1_2:+63492625 None:intergenic
GAAATTACCAAAAGGAAATA+TGG 0.304389 1_2:+63494619 None:intergenic
CTTCTGCTGCACATGTTATT+GGG 0.316928 1_2:-63487993 Msa0084190:CDS
ACCATTAATGTAAATGGCTT+TGG 0.317187 1_2:+63494834 None:intergenic
AGGTATTATACTGGTGGATA+TGG 0.324040 1_2:+63488469 None:intergenic
GCTTCCAATACTTAATCCTT+TGG 0.325570 1_2:-63487136 Msa0084190:CDS
TCTGAAAGCTGGCCCAATAT+TGG 0.326045 1_2:+63494686 None:intergenic
TCCACCACCATATTTCCTTT+TGG 0.332298 1_2:-63494626 Msa0084190:intron
GCCATTGATGTAAATAGCTT+TGG 0.356157 1_2:+63488697 None:intergenic
CCTAGTTGAAACTGTGAAAC+TGG 0.363738 1_2:-63487772 Msa0084190:CDS
AGGAAGAAATGCATATAAAC+TGG 0.364989 1_2:+63493894 None:intergenic
TCCACCAGTATAATACCTTT+TGG 0.371542 1_2:-63488464 Msa0084190:intron
TACTTCCACTAAGCATTCAT+TGG 0.375771 1_2:-63488796 Msa0084190:CDS
TACTTCCACTAAGCATTCAT+TGG 0.375771 1_2:-63494933 Msa0084190:CDS
TTGTTGTAGCTTTACTTGCT+TGG 0.379609 1_2:-63488260 Msa0084190:intron
CCATACCTAGGTGGCTCATT+TGG 0.381628 1_2:-63486788 Msa0084190:CDS
TTGGTGTAGCTTTACTTGCT+TGG 0.383852 1_2:-63494342 Msa0084190:intron
CCGCGGAAATAGTAATCTTC+AGG 0.389670 1_2:-63487668 Msa0084190:intron
CCGCGGAAATAGTAATCTTC+AGG 0.389670 1_2:-63493770 Msa0084190:intron
TTTCTGCTTCACATGTTGTT+GGG 0.389841 1_2:-63494093 Msa0084190:CDS
CTTCTGATGATGGTCGGAAT+TGG 0.392333 1_2:-63487319 Msa0084190:CDS
CTTCTGATGATGGTCGGAAT+TGG 0.392333 1_2:-63493384 Msa0084190:CDS
GCAGTATTTGGTTGGATCAC+TGG 0.394856 1_2:-63494121 Msa0084190:CDS
CCATATTTAAGTGCCTCATT+TGG 0.394933 1_2:-63492625 Msa0084190:CDS
TCCTCATAGATTTATATCTT+CGG 0.396596 1_2:+63493796 None:intergenic
TCATCACTTGAACCAGTATC+AGG 0.398176 1_2:+63486071 None:intergenic
AAAGAGCAGCAGTATTTAGT+TGG 0.403122 1_2:-63488029 Msa0084190:CDS
TGGATTAGCATGGGCACCTT+GGG 0.405021 1_2:-63486969 Msa0084190:intron
TGGATTAGCATGGGCACCTT+GGG 0.405021 1_2:-63492931 Msa0084190:intron
GGAAGTAACAAGTGGAATAA+TGG 0.425167 1_2:+63494949 None:intergenic
GCTAAAACCTTTGCATTCAA+AGG 0.425492 1_2:+63491905 None:intergenic
GGAAGTAACAAGTGAAATAA+AGG 0.430380 1_2:+63488812 None:intergenic
CTGGATTAGCATGGGCACCT+TGG 0.432018 1_2:-63486970 Msa0084190:CDS
CTGGATTAGCATGGGCACCT+TGG 0.432018 1_2:-63492932 Msa0084190:CDS
AATTCAGAAGCGGGTCTTGT+TGG 0.432583 1_2:+63486033 None:intergenic
ATGATGGTACTTCCAATATT+GGG 0.434227 1_2:-63494698 Msa0084190:CDS
TCCAAAGCTATTTACATCAA+TGG 0.440133 1_2:-63488698 Msa0084190:CDS
AATTGTGCGAAGCACGTAGT+AGG 0.440369 1_2:+63494294 None:intergenic
TGCATGCTAAATCCTGATAC+TGG 0.440797 1_2:-63486083 Msa0084190:CDS
GCCTAACTCTTGGATATTTG+TGG 0.444573 1_2:+63493848 None:intergenic
AGCATCAAGCTCAACCAATC+AGG 0.446005 1_2:-63486604 Msa0084190:intron
AGCATCAAGCTCAACCAATC+AGG 0.446005 1_2:-63492272 Msa0084190:intron
ATTACCAAAAGGTATTATAC+TGG 0.447589 1_2:+63488460 None:intergenic
CCAATACTTAATCCATTGGT+TGG 0.448307 1_2:-63493092 Msa0084190:CDS
GCAATCCAATGAATGCTTAG+TGG 0.451192 1_2:+63488791 None:intergenic
GCAATCCAATGAATGCTTAG+TGG 0.451192 1_2:+63494928 None:intergenic
CCAACCAATGGATTAAGTAT+TGG 0.453351 1_2:+63493092 None:intergenic
CCAATACTTAATCCTTTGGT+TGG 0.453681 1_2:-63487132 Msa0084190:CDS
ACTTCCAATACTTAATCCAT+TGG 0.457054 1_2:-63493096 Msa0084190:CDS
ATGTTGTCAATGAAAACAAA+AGG 0.465641 1_2:-63494147 Msa0084190:CDS
CCAACCAAAGGATTAAGTAT+TGG 0.467513 1_2:+63487132 None:intergenic
ACAGGAAAGAACCAAGAGTT+AGG 0.467535 1_2:-63487747 Msa0084190:CDS
CCTAACTCTTGGATATTTGT+GGG 0.469016 1_2:+63493849 None:intergenic
ATATGCTATTGATGCAAGTA+AGG 0.470324 1_2:+63487086 None:intergenic
ATATGCTATTGATGCAAGTA+AGG 0.470324 1_2:+63493046 None:intergenic
CTAAAACCTTTGCATTCAAA+GGG 0.470696 1_2:+63491906 None:intergenic
CTTGGCTTTCTGGATTAGCA+TGG 0.472037 1_2:-63486979 Msa0084190:CDS
CTTGGCTTTCTGGATTAGCA+TGG 0.472037 1_2:-63492941 Msa0084190:CDS
ATGCATATAAAGTGGACAAA+AGG 0.473052 1_2:+63487800 None:intergenic
CCCACAAATATCCAAGAGTT+AGG 0.475946 1_2:-63493849 Msa0084190:CDS
CCAGTTTCACAGTTTCAACT+AGG 0.478479 1_2:+63487772 None:intergenic
ACATGTTGTTGGGAACGTCT+TGG 0.481757 1_2:-63494083 Msa0084190:CDS
AAAAGGAAAACAAACCTGAT+TGG 0.484080 1_2:+63486590 None:intergenic
TAATACATACTGTTTGTTGA+AGG 0.491556 1_2:+63488675 None:intergenic
TGGAGCAAGATGATTGTTGA+GGG 0.492964 1_2:+63488717 None:intergenic
TAGAGCAGAAGCCTAACTCT+TGG 0.495111 1_2:+63493838 None:intergenic
AAATGTGCGAAGCACATAGT+AGG 0.495737 1_2:+63488212 None:intergenic
GTTCTCAGAACTTCTGATGA+TGG 0.496970 1_2:-63487329 Msa0084190:CDS
GTTCTCAGAACTTCTGATGA+TGG 0.496970 1_2:-63493394 Msa0084190:CDS
TTGGCTTTCTGGATTAGCAT+GGG 0.498516 1_2:-63486978 Msa0084190:CDS
TTGGCTTTCTGGATTAGCAT+GGG 0.498516 1_2:-63492940 Msa0084190:CDS
CTGCATTTCTGTCGCGTATG+TGG 0.504768 1_2:-63488160 Msa0084190:intron
CTGCATCTCTGTCGCGTATG+TGG 0.504768 1_2:-63494242 Msa0084190:intron
ATCAGTTATAATTCAGAAGC+GGG 0.507005 1_2:+63486024 None:intergenic
AGGAAATATGGTGGTGGACA+TGG 0.507063 1_2:+63494631 None:intergenic
GCAGTATTTAGTTGGATCAC+TGG 0.507206 1_2:-63488021 Msa0084190:CDS
CAGTCCCACATTAAGAGGCA+TGG 0.508067 1_2:-63493629 Msa0084190:CDS
AAAAGGACAACAAACCTGAT+TGG 0.508525 1_2:+63492258 None:intergenic
AAAGGGCAGCAGTATTTGGT+TGG 0.512553 1_2:-63494129 Msa0084190:CDS
AGGAAGAAATGCATATAAAG+TGG 0.514915 1_2:+63487792 None:intergenic
TCTGAAAGCTGACCCAAAAG+TGG 0.523725 1_2:+63488524 None:intergenic
TTATTGGGAACGTCTTTGCT+CGG 0.524226 1_2:-63487978 Msa0084190:CDS
GAAACTGTGAAACTGGATAC+AGG 0.524268 1_2:-63487765 Msa0084190:CDS
AATAGCCATGCCTCTTAATG+TGG 0.525630 1_2:+63493624 None:intergenic
ATCACTTTCTCTCCAACCAA+TGG 0.535617 1_2:+63493080 None:intergenic
TACTGGTGGATATGGTAAGA+AGG 0.538200 1_2:+63488477 None:intergenic
GGCCATGTTCATCTGAAAGC+TGG 0.540075 1_2:+63494675 None:intergenic
GACATAGATAATGCCAAATG+AGG 0.541816 1_2:+63492612 None:intergenic
GACGAAGATACAAATCTATG+AGG 0.550040 1_2:-63487695 Msa0084190:CDS
CCAAATGAGCCACCTAGGTA+TGG 0.550789 1_2:+63486788 None:intergenic
ATTTCGTATATAATCAGTAA+AGG 0.551876 1_2:-63494274 Msa0084190:CDS
TAACAAGGAGTAAAGGTTTG+CGG 0.552850 1_2:+63494654 None:intergenic
TGTTGTCAATGAAAACAAAA+GGG 0.564808 1_2:-63494146 Msa0084190:CDS
AGAAACATGTCGTGGTGGAG+TGG 0.565655 1_2:-63488851 Msa0084190:CDS
ATCACTTTCTCTCCAACCAA+AGG 0.567989 1_2:+63487120 None:intergenic
TTGGAGCAAGATGATTGTTG+AGG 0.568723 1_2:+63488716 None:intergenic
GACATGGTAACAAGGAGTAA+AGG 0.569010 1_2:+63494647 None:intergenic
AGAACCATGTCGTGGTGGAG+TGG 0.569202 1_2:-63494988 None:intergenic
TTGAAAACATACCAGCAAAA+CGG 0.572492 1_2:+63493561 None:intergenic
TTCAAGTGATGATGACTTGG+AGG 0.573020 1_2:-63486060 Msa0084190:CDS
GCCGAAGATATAAATCTATG+AGG 0.575578 1_2:-63493797 Msa0084190:CDS
CAGTCCTGCATTAAGAGGCG+TGG 0.579001 1_2:-63487568 Msa0084190:CDS
GATATGGTAAGAAGGAGTAG+AGG 0.581219 1_2:+63488485 None:intergenic
TTGGAGCAAGATGATTGTTG+AGG 0.583697 1_2:+63494853 None:intergenic
TACTCACGGCAGGTTTCTCA+AGG 0.586776 1_2:+63486753 None:intergenic
TCAGAACTTCTGATGATGGT+CGG 0.592201 1_2:-63487325 Msa0084190:CDS
TCAGAACTTCTGATGATGGT+CGG 0.592201 1_2:-63493390 Msa0084190:CDS
ACTTGCTTGGAATCAATCTG+AGG 0.592218 1_2:-63494329 Msa0084190:CDS
CAGCAAAACACTGTGTATGC+CGG 0.594917 1_2:+63487512 None:intergenic
AGAGCCACGCCTCTTAATGC+AGG 0.599418 1_2:+63487564 None:intergenic
TAGTACAGAAGCCTAACTCT+TGG 0.599829 1_2:+63487736 None:intergenic
GATGCTCCCTTTGAATGCAA+AGG 0.600708 1_2:-63491912 Msa0084190:CDS
ACCAAAAGGAAATATGGTGG+TGG 0.601761 1_2:+63494625 None:intergenic
ACCAAAAGGTATTATACTGG+TGG 0.609503 1_2:+63488463 None:intergenic
TAATGCCAAATGAGCCACCT+AGG 0.613139 1_2:+63486783 None:intergenic
TGCTTAGTGGAAGTAACAAG+TGG 0.613388 1_2:+63494941 None:intergenic
TGGTGGTGGACATGGTAACA+AGG 0.613830 1_2:+63494639 None:intergenic
TACTCACAGCTGGTTTCACA+AGG 0.613962 1_2:+63492590 None:intergenic
AATCAGTTATAATTCAGAAG+CGG 0.622840 1_2:+63486023 None:intergenic
TGGTTCAAGTGATGATGACT+TGG 0.630019 1_2:-63486063 Msa0084190:CDS
CCTGAAGATTACTATTTCCG+CGG 0.635434 1_2:+63493770 None:intergenic
ATAGCCATGCCTCTTAATGT+GGG 0.636523 1_2:+63493625 None:intergenic
GGCCAGCTTTCAGATGAACA+TGG 0.640180 1_2:-63494677 Msa0084190:CDS
CCTGAAGATTACTATTTCCG+CGG 0.641877 1_2:+63487668 None:intergenic
ATCTCAGAACCATGTCGTGG+TGG 0.645426 1_2:-63494993 None:intergenic
GAATCCACTCCACCACGACA+TGG 0.648232 1_2:+63494984 None:intergenic
ATTACCAAAAGGAAATATGG+TGG 0.656790 1_2:+63494622 None:intergenic
ATCTCAGAAACATGTCGTGG+TGG 0.661528 1_2:-63488856 Msa0084190:intron
GGTCAGCTTTCAGATGAACA+CGG 0.662882 1_2:-63488515 Msa0084190:CDS
CTCATCTCAGAAACATGTCG+TGG 0.663073 1_2:-63488859 Msa0084190:intron
ACTATGCAGGTACCATACCT+AGG 0.671765 1_2:-63486800 Msa0084190:intron
ATCATCTCAGAACCATGTCG+TGG 0.673274 1_2:-63494996 None:intergenic
TAAATCTATGAGGAATGCCG+CGG 0.674285 1_2:-63493787 Msa0084190:CDS
CAAATCTATGAGGAATGCCG+CGG 0.682083 1_2:-63487685 Msa0084190:CDS
AAAACATACCAGCAAAACGG+TGG 0.718416 1_2:+63493564 None:intergenic
TTGTTGAGGACATAAAGCAG+TGG 0.744421 1_2:+63494867 None:intergenic
ATGCAGGTACCATACCTAGG+TGG 0.748646 1_2:-63486797 Msa0084190:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTCTTAATCTAATATAT+TGG - chr1_2:63486413-63486432 Msa0084190:intron 10.0%
!! TGAAAAACATTATATTATTT+AGG + chr1_2:63487360-63487379 None:intergenic 10.0%
!! TAATCAAAATTAATGTAAAA+TGG + chr1_2:63489024-63489043 None:intergenic 10.0%
!! TGTAGATATATAATTAATTA+AGG - chr1_2:63489388-63489407 Msa0084190:intron 10.0%
!! ATATATTCATATATATAGTT+GGG - chr1_2:63489451-63489470 Msa0084190:intron 10.0%
!!! TTTTTTTTTTTTTTTGAACA+AGG - chr1_2:63489677-63489696 Msa0084190:intron 10.0%
!! TGTATTTATCAAAATTATAT+TGG + chr1_2:63490492-63490511 None:intergenic 10.0%
!! TAATAATAATATTTATCAGT+AGG + chr1_2:63490761-63490780 None:intergenic 10.0%
!!! TTTTAAATACTTTTTTTAAG+GGG - chr1_2:63491283-63491302 Msa0084190:intron 10.0%
!! TCAAAAAAAAAATTATTTCA+AGG + chr1_2:63491528-63491547 None:intergenic 10.0%
!! TAATAATATATTACTAATGT+TGG + chr1_2:63492376-63492395 None:intergenic 10.0%
!!! ATAATTTTATCATATATATG+AGG + chr1_2:63494293-63494312 None:intergenic 10.0%
!!! TTTAAAATCAAACATATGAT+TGG + chr1_2:63486512-63486531 None:intergenic 15.0%
!! AGAATATAATACAAAAAAAG+TGG + chr1_2:63488526-63488545 None:intergenic 15.0%
!! CATATATTCATATATATAGT+TGG - chr1_2:63489450-63489469 Msa0084190:intron 15.0%
!!! TAACATGATTTTTAATAACA+AGG + chr1_2:63489964-63489983 None:intergenic 15.0%
!!! TTTTTTTTACATTTACAACA+AGG + chr1_2:63490352-63490371 None:intergenic 15.0%
!!! ATAATTTTGATAAATACAGA+TGG - chr1_2:63490494-63490513 Msa0084190:intron 15.0%
!!! TTTATTGATTAAAATTTACC+TGG - chr1_2:63490950-63490969 Msa0084190:intron 15.0%
!!! ACTTTATTTATTTATCTTGA+GGG + chr1_2:63491140-63491159 None:intergenic 15.0%
!!! AACTTTATTTATTTATCTTG+AGG + chr1_2:63491141-63491160 None:intergenic 15.0%
!! AATATATTATTAATGAGTTG+AGG - chr1_2:63492384-63492403 Msa0084190:intron 15.0%
!!! TGAAAATTTTGACAATATTT+AGG + chr1_2:63493421-63493440 None:intergenic 15.0%
!! AAATTATATGAAATGTTGTT+TGG + chr1_2:63494487-63494506 None:intergenic 15.0%
!! GAAAAATTGAAATTACCAAA+AGG + chr1_2:63486399-63486418 None:intergenic 20.0%
!! ATTTCGTATATAATCAGTAA+AGG - chr1_2:63486733-63486752 Msa0084190:intron 20.0%
!! AATAGTTACAATCATTAGTT+TGG + chr1_2:63487705-63487724 None:intergenic 20.0%
!!! TTTTGTGATTCTTCTTTATA+AGG - chr1_2:63487750-63487769 Msa0084190:CDS 20.0%
!!! TTCATAATATATTTTGGTGT+AGG - chr1_2:63488043-63488062 Msa0084190:CDS 20.0%
!! ACTTGAATAAGAAGTTATAA+CGG - chr1_2:63488213-63488232 Msa0084190:CDS 20.0%
!! TACAAATTTACATGCTTATA+TGG - chr1_2:63488290-63488309 Msa0084190:intron 20.0%
!!! ATTTAATTTGTATGCACTAT+CGG + chr1_2:63488616-63488635 None:intergenic 20.0%
!! CATATGATACATTGTTAATT+TGG + chr1_2:63488848-63488867 None:intergenic 20.0%
!! ATCAATTGTACACATATATT+AGG - chr1_2:63489353-63489372 Msa0084190:intron 20.0%
!!! TTTGATCACTTTTTATAGTT+TGG + chr1_2:63490062-63490081 None:intergenic 20.0%
!! AAATTCAAATTCTTTAAGCA+AGG + chr1_2:63490454-63490473 None:intergenic 20.0%
!!! CATTTCTTTGTTTTTTTTTG+TGG + chr1_2:63490901-63490920 None:intergenic 20.0%
!! TTTAACACACTTTCTTTAAT+CGG + chr1_2:63491032-63491051 None:intergenic 20.0%
!! AAAAAATATGTGTTGAAATC+TGG - chr1_2:63491049-63491068 Msa0084190:intron 20.0%
!! AAAAATATGTGTTGAAATCT+GGG - chr1_2:63491050-63491069 Msa0084190:intron 20.0%
!! AAACTATTCACATGAAAATT+TGG - chr1_2:63491078-63491097 Msa0084190:intron 20.0%
!!! CTTTATTTATTTATCTTGAG+GGG + chr1_2:63491139-63491158 None:intergenic 20.0%
!! TTGTTATATTCATATGACAA+CGG + chr1_2:63491371-63491390 None:intergenic 20.0%
!! ATTAAATTATTTCAAGGCAT+CGG + chr1_2:63491551-63491570 None:intergenic 20.0%
!! ATAACTTATTTATATACGGT+TGG + chr1_2:63492059-63492078 None:intergenic 20.0%
!! GGACATAACTTATTTATATA+CGG + chr1_2:63492063-63492082 None:intergenic 20.0%
!!! CAAATACTAGTATGTTATTT+TGG - chr1_2:63492604-63492623 Msa0084190:CDS 20.0%
!! GTAAATCAACATAAATGTTA+AGG + chr1_2:63492673-63492692 None:intergenic 20.0%
!!! TTCTTAATATATTTTGGTGT+AGG - chr1_2:63494005-63494024 Msa0084190:intron 20.0%
!! TAAGCATGTAAATTTGTATA+AGG + chr1_2:63488288-63488307 None:intergenic 20.0%
!! TACAAATTTACATGCTTATA+TGG - chr1_2:63488290-63488309 Msa0084190:intron 20.0%
!! AAACTCAATAACTTTCATTA+TGG + chr1_2:63494182-63494201 None:intergenic 20.0%
!!! CATTGATTCTAACTATAAAA+TGG + chr1_2:63494319-63494338 None:intergenic 20.0%
!!! CATTTTATAGTTAGAATCAA+TGG - chr1_2:63494317-63494336 Msa0084190:CDS 20.0%
!! ACATGACAAGAAATATTTAA+TGG + chr1_2:63494361-63494380 None:intergenic 20.0%
!! CTTTCAAAATTAGTGTAAAA+TGG + chr1_2:63494659-63494678 None:intergenic 20.0%
!!! ATCATCTAATTGTTGTTTTT+TGG - chr1_2:63494813-63494832 Msa0084190:intron 20.0%
! TTGAAGACCATTAATGTAAA+TGG + chr1_2:63486182-63486201 None:intergenic 25.0%
! GAAATTACCAAAAGGAAATA+TGG + chr1_2:63486391-63486410 None:intergenic 25.0%
! ATGTTGTCAATGAAAACAAA+AGG - chr1_2:63486860-63486879 Msa0084190:intron 25.0%
! TGTTGTCAATGAAAACAAAA+GGG - chr1_2:63486861-63486880 Msa0084190:intron 25.0%
! AATTATAGCTTACTTGTTTC+AGG - chr1_2:63487064-63487083 Msa0084190:intron 25.0%
! TCCTCATAGATTTATATCTT+CGG + chr1_2:63487214-63487233 None:intergenic 25.0%
! GTTGAGGAATTCAATTAAAT+CGG + chr1_2:63487472-63487491 None:intergenic 25.0%
! TAAATAGTAGTAACACAACA+AGG + chr1_2:63487501-63487520 None:intergenic 25.0%
!!! TACTATTTGAAAGCTGTTTT+TGG - chr1_2:63487575-63487594 Msa0084190:intron 25.0%
!! GCTCTCTTCATAATATATTT+TGG - chr1_2:63488037-63488056 Msa0084190:CDS 25.0%
!! TTATCAATTTTACTTACCCA+AGG + chr1_2:63488095-63488114 None:intergenic 25.0%
! CTTGAATAAGAAGTTATAAC+GGG - chr1_2:63488214-63488233 Msa0084190:CDS 25.0%
! GAGAAATTAATTGCAATATC+AGG + chr1_2:63488686-63488705 None:intergenic 25.0%
!! ATACATTGTTAATTTGGTGA+GGG + chr1_2:63488842-63488861 None:intergenic 25.0%
!! TTTGCTTTCTCTGAATTTTA+TGG - chr1_2:63488869-63488888 Msa0084190:intron 25.0%
! TCATTACTTGAAGGATTATT+AGG + chr1_2:63489286-63489305 None:intergenic 25.0%
! TTATAAAGAGTTTGAGAATG+GGG + chr1_2:63489504-63489523 None:intergenic 25.0%
! CTTATAAAGAGTTTGAGAAT+GGG + chr1_2:63489505-63489524 None:intergenic 25.0%
! ACTTATAAAGAGTTTGAGAA+TGG + chr1_2:63489506-63489525 None:intergenic 25.0%
! TTATTGTCTTCATGTTTAAG+TGG + chr1_2:63489549-63489568 None:intergenic 25.0%
! CGAAAATAAGTTTCATTTGA+GGG + chr1_2:63489646-63489665 None:intergenic 25.0%
! TCGAAAATAAGTTTCATTTG+AGG + chr1_2:63489647-63489666 None:intergenic 25.0%
! CAAAAAGCCAAAAAAGTTTA+CGG - chr1_2:63489759-63489778 Msa0084190:intron 25.0%
!!! TATTACACCGTAAACTTTTT+TGG + chr1_2:63489769-63489788 None:intergenic 25.0%
! TTACGGTGTAATACAAATAA+AGG - chr1_2:63489776-63489795 Msa0084190:intron 25.0%
!!! TGCTTTTAGTTATCATTGTT+GGG + chr1_2:63489865-63489884 None:intergenic 25.0%
!!! TTGCTTTTAGTTATCATTGT+TGG + chr1_2:63489866-63489885 None:intergenic 25.0%
!! TTTTTATAGTTTGGCCAATT+AGG + chr1_2:63490053-63490072 None:intergenic 25.0%
!! TTCTTTTATCGAATCCTATT+TGG + chr1_2:63490325-63490344 None:intergenic 25.0%
! GTGAAATAGACTATCAAATA+AGG + chr1_2:63490375-63490394 None:intergenic 25.0%
! ATTTCACCAAAATTCCTAAT+TGG - chr1_2:63490388-63490407 Msa0084190:intron 25.0%
! TAACAAACGAGTCTTAAAAA+AGG - chr1_2:63490681-63490700 Msa0084190:intron 25.0%
! AACAAACGAGTCTTAAAAAA+GGG - chr1_2:63490682-63490701 Msa0084190:intron 25.0%
! GACAATACATAATATATGCA+AGG - chr1_2:63490853-63490872 Msa0084190:intron 25.0%
!!! GGATCTCATATAATTTTAGT+GGG + chr1_2:63490978-63490997 None:intergenic 25.0%
!! TGGATCTCATATAATTTTAG+TGG + chr1_2:63490979-63490998 None:intergenic 25.0%
! TTAATCGGTTAAAATTCACA+TGG + chr1_2:63491017-63491036 None:intergenic 25.0%
! ATAAAGTTATCCTCAAGAAA+TGG - chr1_2:63491153-63491172 Msa0084190:intron 25.0%
! CTCGGAATTAAATTATTTCA+AGG + chr1_2:63491557-63491576 None:intergenic 25.0%
! CTTGAAATAATTTAATTCCG+AGG - chr1_2:63491555-63491574 Msa0084190:intron 25.0%
!! GAAACACTTTTAAACACATT+TGG - chr1_2:63491762-63491781 Msa0084190:intron 25.0%
!!! TTTTTTCCAAATCTTGATTG+TGG + chr1_2:63491811-63491830 None:intergenic 25.0%
! ACAATCAAGATTTGGAAAAA+AGG - chr1_2:63491810-63491829 Msa0084190:intron 25.0%
! ATGTCAATTTGTGTCAAATT+AGG - chr1_2:63491895-63491914 Msa0084190:CDS 25.0%
! TCATAAGATAAAGGATAAGA+AGG + chr1_2:63491944-63491963 None:intergenic 25.0%
! TTAGAGTGATCATAAGATAA+AGG + chr1_2:63491953-63491972 None:intergenic 25.0%
! TTATTTATATACGGTTGGAA+AGG + chr1_2:63492054-63492073 None:intergenic 25.0%
!! TAATACATACTGTTTGTTGA+AGG + chr1_2:63492335-63492354 None:intergenic 25.0%
!!! ATTACCAAAAGGTATTATAC+TGG + chr1_2:63492550-63492569 None:intergenic 25.0%
! GTGAAATTGTAATTACCAAA+AGG + chr1_2:63492561-63492580 None:intergenic 25.0%
! TGTGTATGTCTTATAATTTG+AGG + chr1_2:63492586-63492605 None:intergenic 25.0%
!!! TTTTGGTTAATCTAATGTGT+TGG - chr1_2:63492621-63492640 Msa0084190:CDS 25.0%
!! ATTTATACTTCCTCTCTTTT+AGG - chr1_2:63492934-63492953 Msa0084190:CDS 25.0%
!!! TTTTTTCTATACTCACTGTT+TGG - chr1_2:63493132-63493151 Msa0084190:intron 25.0%
! TTGGTTATGATTCTTAATCA+TGG - chr1_2:63493151-63493170 Msa0084190:intron 25.0%
! GATTCTTAATCATGGTTTAT+TGG - chr1_2:63493159-63493178 Msa0084190:intron 25.0%
!! TGTCTCTTTCTTTTATAAGT+TGG - chr1_2:63493466-63493485 Msa0084190:intron 25.0%
!! GTCTCTTTCTTTTATAAGTT+GGG - chr1_2:63493467-63493486 Msa0084190:intron 25.0%
!!! TACTATTTCAAAGCTGTTTT+TGG - chr1_2:63493640-63493659 Msa0084190:intron 25.0%
! ATATCATACAATCATCAGTA+TGG + chr1_2:63493770-63493789 None:intergenic 25.0%
!! GCTCTCTTCTTAATATATTT+TGG - chr1_2:63493999-63494018 Msa0084190:intron 25.0%
!! TTATCAATTTTACTTACCCA+AGG + chr1_2:63488095-63488114 None:intergenic 25.0%
! GAAAATTAATCTACTACTCA+CGG + chr1_2:63494271-63494290 None:intergenic 25.0%
! AAATATTTAATGGCAATACC+AGG + chr1_2:63494351-63494370 None:intergenic 25.0%
! AATAGAATGAGACAAAGAAA+AGG + chr1_2:63494437-63494456 None:intergenic 25.0%
!! AATTTTGTGATGTAACTTCA+TGG - chr1_2:63494517-63494536 Msa0084190:intron 25.0%
! AAACAACAATTAGATGATGT+AGG + chr1_2:63494811-63494830 None:intergenic 25.0%
!!! ATTGTTGTTTTTTGGTACAA+TGG - chr1_2:63494821-63494840 Msa0084190:intron 25.0%
!!! TTGTTGTTTTTTGGTACAAT+GGG - chr1_2:63494822-63494841 Msa0084190:CDS 25.0%
TCCAAAGCCATTTACATTAA+TGG - chr1_2:63486172-63486191 Msa0084190:intron 30.0%
ACCATTAATGTAAATGGCTT+TGG + chr1_2:63486176-63486195 None:intergenic 30.0%
ATGATGGTACTTCCAATATT+GGG - chr1_2:63486309-63486328 Msa0084190:intron 30.0%
ATTACCAAAAGGAAATATGG+TGG + chr1_2:63486388-63486407 None:intergenic 30.0%
TCAACAAGAATACAGTGAAA+AGG + chr1_2:63486645-63486664 None:intergenic 30.0%
TTCACTGTATTCTTGTTGAT+TGG - chr1_2:63486646-63486665 Msa0084190:intron 30.0%
! TCCTCAAAACTACATTTTTG+TGG - chr1_2:63486957-63486976 Msa0084190:intron 30.0%
!! ACCACAAAAATGTAGTTTTG+AGG + chr1_2:63486961-63486980 None:intergenic 30.0%
AGGAAGAAATGCATATAAAC+TGG + chr1_2:63487116-63487135 None:intergenic 30.0%
!!! CTAGTTTTACAGTTTCAACT+AGG + chr1_2:63487136-63487155 None:intergenic 30.0%
! TGTCTCTTTCTTTTATGAGT+TGG - chr1_2:63487405-63487424 Msa0084190:intron 30.0%
! GTCTCTTTCTTTTATGAGTT+GGG - chr1_2:63487406-63487425 Msa0084190:intron 30.0%
TTGAAAACATACCAGCAAAA+CGG + chr1_2:63487449-63487468 None:intergenic 30.0%
!! AATTGGTTCAATCTTTTCAC+AGG - chr1_2:63487640-63487659 Msa0084190:intron 30.0%
! GTTACAATCATTAGTTTGGA+GGG + chr1_2:63487701-63487720 None:intergenic 30.0%
! AGTTACAATCATTAGTTTGG+AGG + chr1_2:63487702-63487721 None:intergenic 30.0%
TATAGCTGTTGAGTTTAATC+TGG - chr1_2:63487802-63487821 Msa0084190:CDS 30.0%
ACTTCCAATACTTAATCCAT+TGG - chr1_2:63487911-63487930 Msa0084190:intron 30.0%
ATATGCTATTGATGCAAGTA+AGG + chr1_2:63487964-63487983 None:intergenic 30.0%
GAGAGCTTAGATATGATATT+AGG + chr1_2:63488023-63488042 None:intergenic 30.0%
!!! AATATATTTTGGTGTAGGCT+TGG - chr1_2:63488048-63488067 Msa0084190:CDS 30.0%
AAAAGCTTACTGTGTAATAC+AGG + chr1_2:63488186-63488205 None:intergenic 30.0%
GATCTCACAATGTAGATATT+TGG + chr1_2:63488562-63488581 None:intergenic 30.0%
ATTGATTGTAACTACAGAAG+TGG + chr1_2:63488653-63488672 None:intergenic 30.0%
ACTTCTGTAGTTACAATCAA+TGG - chr1_2:63488652-63488671 Msa0084190:intron 30.0%
GAGTAATAAGTAGGTCAAAA+AGG + chr1_2:63488769-63488788 None:intergenic 30.0%
!! ATTTTGGAGGAGTAATAAGT+AGG + chr1_2:63488778-63488797 None:intergenic 30.0%
! CTACTTGCTTGTATAGATTT+TGG + chr1_2:63488794-63488813 None:intergenic 30.0%
! GATACATTGTTAATTTGGTG+AGG + chr1_2:63488843-63488862 None:intergenic 30.0%
TTATGGTGTAACTTGATTGT+AGG - chr1_2:63488886-63488905 Msa0084190:intron 30.0%
TATGGTGTAACTTGATTGTA+GGG - chr1_2:63488887-63488906 Msa0084190:intron 30.0%
! AAAGCACAAACTTTTATTGC+TGG - chr1_2:63488911-63488930 Msa0084190:intron 30.0%
! AAGCACAAACTTTTATTGCT+GGG - chr1_2:63488912-63488931 Msa0084190:intron 30.0%
CTAAAACCTTTGCATTCAAA+GGG + chr1_2:63489104-63489123 None:intergenic 30.0%
GTAGAGTAGATGAAAGAAAA+TGG + chr1_2:63489180-63489199 None:intergenic 30.0%
AGAAGAGATAAACAACTAGA+GGG + chr1_2:63489202-63489221 None:intergenic 30.0%
TAGAAGAGATAAACAACTAG+AGG + chr1_2:63489203-63489222 None:intergenic 30.0%
!!! ACTTTTTCAGATGATTTCTC+TGG - chr1_2:63489240-63489259 Msa0084190:intron 30.0%
TAATCCTTCAAGTAATGACT+TGG - chr1_2:63489288-63489307 Msa0084190:intron 30.0%
CGAATTTGTGATGAGTAAAT+TGG - chr1_2:63489585-63489604 Msa0084190:intron 30.0%
! TGGTGATCTAAAGTTTCATT+TGG + chr1_2:63489703-63489722 None:intergenic 30.0%
!! CTTAACCATTTGGTTTGTTT+AGG + chr1_2:63489838-63489857 None:intergenic 30.0%
!! TTTTAGTTATCATTGTTGGG+GGG + chr1_2:63489862-63489881 None:intergenic 30.0%
!! CTTTTAGTTATCATTGTTGG+GGG + chr1_2:63489863-63489882 None:intergenic 30.0%
!! GCTTTTAGTTATCATTGTTG+GGG + chr1_2:63489864-63489883 None:intergenic 30.0%
!!! TTAAGCTTCTCTCTTTTTTG+TGG + chr1_2:63489911-63489930 None:intergenic 30.0%
AAGCCAAATTAAGATAAGAG+TGG - chr1_2:63490016-63490035 Msa0084190:intron 30.0%
TGTCCACTCTTATCTTAATT+TGG + chr1_2:63490022-63490041 None:intergenic 30.0%
! CTAGTGGATGAAAAATATAC+CGG + chr1_2:63490417-63490436 None:intergenic 30.0%
! GGACGAAAAAAATTCTGAAA+GGG - chr1_2:63490703-63490722 Msa0084190:intron 30.0%
TGAAAGGGCTCTTATAATTA+AGG - chr1_2:63490718-63490737 Msa0084190:intron 30.0%
TACATAATATATGCAAGGTC+TGG - chr1_2:63490858-63490877 Msa0084190:intron 30.0%
ACATAATATATGCAAGGTCT+GGG - chr1_2:63490859-63490878 Msa0084190:intron 30.0%
!!! ATATAATTTTAGTGGGTTCC+AGG + chr1_2:63490971-63490990 None:intergenic 30.0%
TATTTATTTATCTTGAGGGG+CGG + chr1_2:63491136-63491155 None:intergenic 30.0%
TACTGAAGAGAAAACTTGTA+AGG - chr1_2:63491707-63491726 Msa0084190:intron 30.0%
TCTTATGATCACTCTAACTT+TGG - chr1_2:63491956-63491975 Msa0084190:intron 30.0%
TTAATTGTACCTTGTTCAGT+TGG + chr1_2:63492084-63492103 None:intergenic 30.0%
GGAAGTAACAAGTGAAATAA+AGG + chr1_2:63492198-63492217 None:intergenic 30.0%
TCCAAAGCTATTTACATCAA+TGG - chr1_2:63492309-63492328 Msa0084190:intron 30.0%
TTTCTTTCCTTCTAGATTAC+TGG - chr1_2:63492438-63492457 Msa0084190:intron 30.0%
GAAAATTCCAGTAATCTAGA+AGG + chr1_2:63492448-63492467 None:intergenic 30.0%
!! GATTACTGGAATTTTCAAGA+TGG - chr1_2:63492452-63492471 Msa0084190:intron 30.0%
GTATGTCTTATAATTTGAGG+AGG + chr1_2:63492583-63492602 None:intergenic 30.0%
! TTTACAATACTTTTCTCCAG+AGG - chr1_2:63492698-63492717 Msa0084190:intron 30.0%
! AAACAAATTGTCATTTCCTC+TGG + chr1_2:63492717-63492736 None:intergenic 30.0%
! TTTTCGCATATAATCAGTCA+AGG - chr1_2:63492815-63492834 Msa0084190:intron 30.0%
!! AATCATGGTTTATTGGTTTC+AGG - chr1_2:63493166-63493185 Msa0084190:intron 30.0%
ATGCATATAAAGTGGACAAA+AGG + chr1_2:63493210-63493229 None:intergenic 30.0%
AGGAAGAAATGCATATAAAG+TGG + chr1_2:63493218-63493237 None:intergenic 30.0%
!! TTTTATAAGTTGGGAATGAC+CGG - chr1_2:63493476-63493495 Msa0084190:intron 30.0%
GTTGAGGACTTCAATTAAAT+CGG + chr1_2:63493533-63493552 None:intergenic 30.0%
!! AATTGGTTCAATCTTTTCTC+AGG - chr1_2:63493705-63493724 Msa0084190:intron 30.0%
ATATGCTATTGATGCAAGTA+AGG + chr1_2:63487964-63487983 None:intergenic 30.0%
GAGAGCTTAGATATGATATT+AGG + chr1_2:63488023-63488042 None:intergenic 30.0%
!!! AATATATTTTGGTGTAGGCT+TGG - chr1_2:63488048-63488067 Msa0084190:CDS 30.0%
AACTTTCATTATGGAAATGC+AGG + chr1_2:63494173-63494192 None:intergenic 30.0%
TTGAGTTTAATTCACTATGC+AGG - chr1_2:63494194-63494213 Msa0084190:intron 30.0%
AAAAGGAAAACAAACCTGAT+TGG + chr1_2:63494420-63494439 None:intergenic 30.0%
!! TTTGGTTAGTCTTTCTGATT+AGG + chr1_2:63494469-63494488 None:intergenic 30.0%
! AAAGCACAAACTTTTATTGC+TGG - chr1_2:63488911-63488930 Msa0084190:intron 30.0%
! AAGCACAAACTTTTATTGCT+GGG - chr1_2:63488912-63488931 Msa0084190:intron 30.0%
CTAAAACCTTTGCATTCAAA+GGG + chr1_2:63489104-63489123 None:intergenic 30.0%
GGAAGTAACAAGTGGAATAA+TGG + chr1_2:63486061-63486080 None:intergenic 35.0%
TACTTCCACTAAGCATTCAT+TGG - chr1_2:63486074-63486093 Msa0084190:CDS 35.0%
!!! CTTTTTTCCTTCTAGATTGC+TGG - chr1_2:63486276-63486295 Msa0084190:intron 35.0%
GAAAATTCCAGCAATCTAGA+AGG + chr1_2:63486286-63486305 None:intergenic 35.0%
!! TGCTGGAATTTTCAAGATGA+TGG - chr1_2:63486293-63486312 Msa0084190:intron 35.0%
! GATGATGGTACTTCCAATAT+TGG - chr1_2:63486308-63486327 Msa0084190:intron 35.0%
TAACAAGGAGTAAAGGTTTG+CGG + chr1_2:63486356-63486375 None:intergenic 35.0%
TGATATATCTTTCCTCTGTC+AGG - chr1_2:63486834-63486853 Msa0084190:intron 35.0%
! TTTTCTGCTTCACATGTTGT+TGG - chr1_2:63486913-63486932 Msa0084190:intron 35.0%
TTTCTGCTTCACATGTTGTT+GGG - chr1_2:63486914-63486933 Msa0084190:intron 35.0%
CCTAACTCTTGGATATTTGT+GGG + chr1_2:63487161-63487180 None:intergenic 35.0%
GCCGAAGATATAAATCTATG+AGG - chr1_2:63487210-63487229 Msa0084190:intron 35.0%
!! TTTTTCAGTCCCACATTAAG+AGG - chr1_2:63487373-63487392 Msa0084190:intron 35.0%
!! TTTTATGAGTTGGGAATGTC+TGG - chr1_2:63487415-63487434 Msa0084190:intron 35.0%
CACAACAAGGAAAAAAGTTG+AGG + chr1_2:63487488-63487507 None:intergenic 35.0%
ACAGGTATAATGATTCTCAG+AGG - chr1_2:63487658-63487677 Msa0084190:intron 35.0%
GTATTGGAAGTAACACAATC+TGG + chr1_2:63487902-63487921 None:intergenic 35.0%
!! CCAACCAATGGATTAAGTAT+TGG + chr1_2:63487918-63487937 None:intergenic 35.0%
CCAATACTTAATCCATTGGT+TGG - chr1_2:63487915-63487934 Msa0084190:intron 35.0%
TTGTAACAGTACATGATGCA+AGG + chr1_2:63488262-63488281 None:intergenic 35.0%
TGAGTTTCATTCATCAATGC+AGG - chr1_2:63488357-63488376 Msa0084190:intron 35.0%
! CCAAATGAGGCACTTAAATA+TGG + chr1_2:63488385-63488404 None:intergenic 35.0%
CCATATTTAAGTGCCTCATT+TGG - chr1_2:63488382-63488401 Msa0084190:intron 35.0%
GACATAGATAATGCCAAATG+AGG + chr1_2:63488398-63488417 None:intergenic 35.0%
TTCGATGCACGTCTAAAAAA+AGG + chr1_2:63488485-63488504 None:intergenic 35.0%
ATACAAAAAAAGTGGCATCG+TGG + chr1_2:63488518-63488537 None:intergenic 35.0%
TAATTGCAATATCAGGAGAC+AGG + chr1_2:63488679-63488698 None:intergenic 35.0%
AAAAGGACAACAAACCTGAT+TGG + chr1_2:63488752-63488771 None:intergenic 35.0%
! CTTGCTTGTATAGATTTTGG+AGG + chr1_2:63488791-63488810 None:intergenic 35.0%
! AGCACAAACTTTTATTGCTG+GGG - chr1_2:63488913-63488932 Msa0084190:intron 35.0%
GTCAAAGGACTCATTACAAT+TGG + chr1_2:63488965-63488984 None:intergenic 35.0%
! GTCTAATGAGAAGTTAGCTT+TGG + chr1_2:63489002-63489021 None:intergenic 35.0%
GCTAAAACCTTTGCATTCAA+AGG + chr1_2:63489105-63489124 None:intergenic 35.0%
TATATGTGCATCTGTATGCA+TGG - chr1_2:63489127-63489146 Msa0084190:intron 35.0%
! GCAATAGACATTTGAAGCAA+AGG + chr1_2:63489417-63489436 None:intergenic 35.0%
!!! ACTTTTTTGGCTTTTTGCTG+TGG + chr1_2:63489756-63489775 None:intergenic 35.0%
TTTAGTTATCATTGTTGGGG+GGG + chr1_2:63489861-63489880 None:intergenic 35.0%
!!! TCTCTCTTTTTTGTGGTAGA+AGG + chr1_2:63489904-63489923 None:intergenic 35.0%
!! AATTTGGCTTTCGTGCATTT+GGG + chr1_2:63490006-63490025 None:intergenic 35.0%
!! TAATTTGGCTTTCGTGCATT+TGG + chr1_2:63490007-63490026 None:intergenic 35.0%
TGGACATCAAACATCCTAAT+TGG - chr1_2:63490036-63490055 Msa0084190:intron 35.0%
AAGTGATCAAACAAGTGCAA+TGG - chr1_2:63490071-63490090 Msa0084190:intron 35.0%
TGTCAAGTAGAACCAAAAAG+AGG - chr1_2:63490131-63490150 Msa0084190:intron 35.0%
GTCAAGTAGAACCAAAAAGA+GGG - chr1_2:63490132-63490151 Msa0084190:intron 35.0%
! TGTTTATCTTGCCCTCTTTT+TGG + chr1_2:63490146-63490165 None:intergenic 35.0%
CTACAAAGGACAATATGCAT+AGG + chr1_2:63490241-63490260 None:intergenic 35.0%
CTATGCATATTGTCCTTTGT+AGG - chr1_2:63490239-63490258 Msa0084190:intron 35.0%
TGTATCTCGTTAAGCCAAAT+AGG - chr1_2:63490308-63490327 Msa0084190:intron 35.0%
CAAAATTCCTAATTGGAGAC+CGG - chr1_2:63490395-63490414 Msa0084190:intron 35.0%
AAATATACCGGTCTCCAATT+AGG + chr1_2:63490405-63490424 None:intergenic 35.0%
! CGGTATATTTTTCATCCACT+AGG - chr1_2:63490415-63490434 Msa0084190:intron 35.0%
GGGACGAAAAAAATTCTGAA+AGG - chr1_2:63490702-63490721 Msa0084190:intron 35.0%
GCTCTTATAATTAAGGACGA+AGG - chr1_2:63490725-63490744 Msa0084190:intron 35.0%
CTTATAATTAAGGACGAAGG+TGG - chr1_2:63490728-63490747 Msa0084190:intron 35.0%
CATAATATATGCAAGGTCTG+GGG - chr1_2:63490860-63490879 Msa0084190:intron 35.0%
!!! GTTTTTTTTTGTGGTGTCGA+GGG + chr1_2:63490892-63490911 None:intergenic 35.0%
!!! TGTTTTTTTTTGTGGTGTCG+AGG + chr1_2:63490893-63490912 None:intergenic 35.0%
GGTTAAAATTCACATGGATC+CGG + chr1_2:63491011-63491030 None:intergenic 35.0%
AGTTATCCTCAAGAAATGGA+AGG - chr1_2:63491157-63491176 Msa0084190:intron 35.0%
GTTATCCTCAAGAAATGGAA+GGG - chr1_2:63491158-63491177 Msa0084190:intron 35.0%
! GCCAAGCTTTTGTGAAAAAA+TGG - chr1_2:63491672-63491691 Msa0084190:intron 35.0%
!!! GCCATTTTTTCACAAAAGCT+TGG + chr1_2:63491676-63491695 None:intergenic 35.0%
AAACTGAGCGTGGAAATATT+AGG - chr1_2:63491734-63491753 Msa0084190:intron 35.0%
AACTGAGCGTGGAAATATTA+GGG - chr1_2:63491735-63491754 Msa0084190:intron 35.0%
TGTTGACCACAATCAAGATT+TGG - chr1_2:63491802-63491821 Msa0084190:intron 35.0%
!! ACACATCAAAGTATTGACGT+CGG - chr1_2:63491998-63492017 Msa0084190:intron 35.0%
AAGTTATGTCCAACTGAACA+AGG - chr1_2:63492072-63492091 Msa0084190:CDS 35.0%
TACTTCCACTAAGCATTCAT+TGG - chr1_2:63486074-63486093 Msa0084190:CDS 35.0%
GCCATTGATGTAAATAGCTT+TGG + chr1_2:63492313-63492332 None:intergenic 35.0%
!! TACTGGAATTTTCAAGATGG+TGG - chr1_2:63492455-63492474 Msa0084190:intron 35.0%
! AGGTATTATACTGGTGGATA+TGG + chr1_2:63492541-63492560 None:intergenic 35.0%
! TCCACCAGTATAATACCTTT+TGG - chr1_2:63492543-63492562 Msa0084190:intron 35.0%
!! ACCAAAAGGTATTATACTGG+TGG + chr1_2:63492547-63492566 None:intergenic 35.0%
! TTGTTGTAGCTTTACTTGCT+TGG - chr1_2:63492747-63492766 Msa0084190:intron 35.0%
ACTTGCTTGGAATCAATCTA+AGG - chr1_2:63492760-63492779 Msa0084190:intron 35.0%
AAAGAGCAGCAGTATTTAGT+TGG - chr1_2:63492978-63492997 Msa0084190:intron 35.0%
! TCCTCAAAACTGCATTTTTG+TGG - chr1_2:63493057-63493076 Msa0084190:CDS 35.0%
! ACCACAAAAATGCAGTTTTG+AGG + chr1_2:63493061-63493080 None:intergenic 35.0%
GACGAAGATACAAATCTATG+AGG - chr1_2:63493312-63493331 Msa0084190:intron 35.0%
! ATTTTCAGTCCTGCATTAAG+AGG - chr1_2:63493434-63493453 Msa0084190:CDS 35.0%
TAAATAGTAGTGACACAGCA+AGG + chr1_2:63493562-63493581 None:intergenic 35.0%
! TGAGACTGTCGATTAAACTA+TGG + chr1_2:63493606-63493625 None:intergenic 35.0%
CATACAATCATCAGTATGGA+GGG + chr1_2:63493766-63493785 None:intergenic 35.0%
TCATACAATCATCAGTATGG+AGG + chr1_2:63493767-63493786 None:intergenic 35.0%
GTATTGGAAGCAATACAATC+TGG + chr1_2:63493862-63493881 None:intergenic 35.0%
GCTTCCAATACTTAATCCTT+TGG - chr1_2:63493871-63493890 Msa0084190:CDS 35.0%
CCAACCAAAGGATTAAGTAT+TGG + chr1_2:63493878-63493897 None:intergenic 35.0%
CCAATACTTAATCCTTTGGT+TGG - chr1_2:63493875-63493894 Msa0084190:CDS 35.0%
AAGGTCATTGTAACAGTACA+TGG + chr1_2:63494107-63494126 None:intergenic 35.0%
TTGTGATGTAACTTCATGGT+AGG - chr1_2:63494521-63494540 Msa0084190:intron 35.0%
TGTGATGTAACTTCATGGTA+GGG - chr1_2:63494522-63494541 Msa0084190:intron 35.0%
! AGCACAAACTTTTATTGCTG+GGG - chr1_2:63488913-63488932 Msa0084190:intron 35.0%
GTCAAAGGACTCATTACAAT+TGG + chr1_2:63488965-63488984 None:intergenic 35.0%
GCTAAAACCTTTGCATTCAA+AGG + chr1_2:63489105-63489124 None:intergenic 35.0%
TGCTTAGTGGAAGTAACAAG+TGG + chr1_2:63486069-63486088 None:intergenic 40.0%
GCAATCCAATGAATGCTTAG+TGG + chr1_2:63486082-63486101 None:intergenic 40.0%
TTGTTGAGGACATAAAGCAG+TGG + chr1_2:63486143-63486162 None:intergenic 40.0%
TTGGAGCAAGATGATTGTTG+AGG + chr1_2:63486157-63486176 None:intergenic 40.0%
GACATGGTAACAAGGAGTAA+AGG + chr1_2:63486363-63486382 None:intergenic 40.0%
! TCCACCACCATATTTCCTTT+TGG - chr1_2:63486381-63486400 Msa0084190:intron 40.0%
ACCAAAAGGAAATATGGTGG+TGG + chr1_2:63486385-63486404 None:intergenic 40.0%
! TTGGTGTAGCTTTACTTGCT+TGG - chr1_2:63486665-63486684 Msa0084190:intron 40.0%
ACTTGCTTGGAATCAATCTG+AGG - chr1_2:63486678-63486697 Msa0084190:intron 40.0%
AACAAAAGGGCAGCAGTATT+TGG - chr1_2:63486874-63486893 Msa0084190:intron 40.0%
CCCACAAATATCCAAGAGTT+AGG - chr1_2:63487158-63487177 Msa0084190:intron 40.0%
GCCTAACTCTTGGATATTTG+TGG + chr1_2:63487162-63487181 None:intergenic 40.0%
TAAATCTATGAGGAATGCCG+CGG - chr1_2:63487220-63487239 Msa0084190:intron 40.0%
CCTGAAGATTACTATTTCCG+CGG + chr1_2:63487240-63487259 None:intergenic 40.0%
ATAGCCATGCCTCTTAATGT+GGG + chr1_2:63487385-63487404 None:intergenic 40.0%
AATAGCCATGCCTCTTAATG+TGG + chr1_2:63487386-63487405 None:intergenic 40.0%
AAAACATACCAGCAAAACGG+TGG + chr1_2:63487446-63487465 None:intergenic 40.0%
GTTATGAGACTGTCAAGCTA+TGG + chr1_2:63487545-63487564 None:intergenic 40.0%
GTTCTCAGAACTTCTGATGA+TGG - chr1_2:63487613-63487632 Msa0084190:intron 40.0%
!! TCAGAACTTCTGATGATGGT+CGG - chr1_2:63487617-63487636 Msa0084190:intron 40.0%
! CATTAGTTTGGAGGGATCAA+AGG + chr1_2:63487693-63487712 None:intergenic 40.0%
ACAATCTGGAAGAAGTTGAC+AGG + chr1_2:63487888-63487907 None:intergenic 40.0%
ATCACTTTCTCTCCAACCAA+TGG + chr1_2:63487930-63487949 None:intergenic 40.0%
!! TTGGCTTTCTGGATTAGCAT+GGG - chr1_2:63488067-63488086 Msa0084190:intron 40.0%
ATCACATATCTACTCACAGC+TGG + chr1_2:63488430-63488449 None:intergenic 40.0%
CAATGTAGATATTTGGCGAG+AGG + chr1_2:63488555-63488574 None:intergenic 40.0%
GTATTGCACTCACAAGTCAA+AGG + chr1_2:63488980-63488999 None:intergenic 40.0%
CCTTCCAAGTCATTACTTGA+AGG + chr1_2:63489295-63489314 None:intergenic 40.0%
! CCTTCAAGTAATGACTTGGA+AGG - chr1_2:63489292-63489311 Msa0084190:intron 40.0%
AATCAGCTATGATCCAGAAG+CGG + chr1_2:63489331-63489350 None:intergenic 40.0%
CGATGCCTAAACAAACCAAA+TGG - chr1_2:63489830-63489849 Msa0084190:intron 40.0%
TTTCGTGCATTTGGGTGTTA+CGG + chr1_2:63489998-63490017 None:intergenic 40.0%
CTACTGAAATGCCAAACCAA+CGG - chr1_2:63490099-63490118 Msa0084190:intron 40.0%
CAGTTGTGTGTTAATGGTTG+CGG + chr1_2:63490194-63490213 None:intergenic 40.0%
GACAACCAGTTGTGTGTTAA+TGG + chr1_2:63490200-63490219 None:intergenic 40.0%
TATTGTCCTTTGTAGGAAGC+CGG - chr1_2:63490246-63490265 Msa0084190:intron 40.0%
! CGGTCTCCAATTAGGAATTT+TGG + chr1_2:63490397-63490416 None:intergenic 40.0%
CAGAATTTACGTCACTCCAT+TGG + chr1_2:63491234-63491253 None:intergenic 40.0%
TGTGAAAAAATGGCAGTTCG+AGG - chr1_2:63491682-63491701 Msa0084190:intron 40.0%
GTGAAAAAATGGCAGTTCGA+GGG - chr1_2:63491683-63491702 Msa0084190:intron 40.0%
GTAAGGTATAAAACTGAGCG+TGG - chr1_2:63491724-63491743 Msa0084190:intron 40.0%
GACGTCAATACTTTGATGTG+TGG + chr1_2:63491999-63492018 None:intergenic 40.0%
GTTGGAAAGGAAGAATACAG+TGG + chr1_2:63492041-63492060 None:intergenic 40.0%
GCAATCCAATGAATGCTTAG+TGG + chr1_2:63486082-63486101 None:intergenic 40.0%
TGGAGCAAGATGATTGTTGA+GGG + chr1_2:63486156-63486175 None:intergenic 40.0%
TTGGAGCAAGATGATTGTTG+AGG + chr1_2:63486157-63486176 None:intergenic 40.0%
!! ATGGTGGTACTTCCACTTTT+GGG - chr1_2:63492471-63492490 Msa0084190:intron 40.0%
GATATGGTAAGAAGGAGTAG+AGG + chr1_2:63492525-63492544 None:intergenic 40.0%
! TACTGGTGGATATGGTAAGA+AGG + chr1_2:63492533-63492552 None:intergenic 40.0%
AAATGTGCGAAGCACATAGT+AGG + chr1_2:63492798-63492817 None:intergenic 40.0%
ACAACATCTGCCTAAAAGAG+AGG + chr1_2:63492947-63492966 None:intergenic 40.0%
GCAGTATTTAGTTGGATCAC+TGG - chr1_2:63492986-63493005 Msa0084190:intron 40.0%
TCTTCTGCTGCACATGTTAT+TGG - chr1_2:63493013-63493032 Msa0084190:intron 40.0%
CTTCTGCTGCACATGTTATT+GGG - chr1_2:63493014-63493033 Msa0084190:intron 40.0%
TTATTGGGAACGTCTTTGCT+CGG - chr1_2:63493029-63493048 Msa0084190:intron 40.0%
CCAGTTTCACAGTTTCAACT+AGG + chr1_2:63493238-63493257 None:intergenic 40.0%
CCTAGTTGAAACTGTGAAAC+TGG - chr1_2:63493235-63493254 Msa0084190:intron 40.0%
GAAACTGTGAAACTGGATAC+AGG - chr1_2:63493242-63493261 Msa0084190:intron 40.0%
ACAGGAAAGAACCAAGAGTT+AGG - chr1_2:63493260-63493279 Msa0084190:intron 40.0%
TAGTACAGAAGCCTAACTCT+TGG + chr1_2:63493274-63493293 None:intergenic 40.0%
CCTGAAGATTACTATTTCCG+CGG + chr1_2:63487240-63487259 None:intergenic 40.0%
CACAGCAAGGAAAAAAGTTG+AGG + chr1_2:63493549-63493568 None:intergenic 40.0%
GTTCTCAGAACTTCTGATGA+TGG - chr1_2:63487613-63487632 Msa0084190:intron 40.0%
!! TCAGAACTTCTGATGATGGT+CGG - chr1_2:63487617-63487636 Msa0084190:intron 40.0%
TCAGGTATAATGCTTCTCAG+AGG - chr1_2:63493723-63493742 Msa0084190:intron 40.0%
ATCACTTTCTCTCCAACCAA+AGG + chr1_2:63487930-63487949 None:intergenic 40.0%
!! TTGGCTTTCTGGATTAGCAT+GGG - chr1_2:63488067-63488086 Msa0084190:intron 40.0%
ATTAATCTACTACTCACGGC+AGG + chr1_2:63494267-63494286 None:intergenic 40.0%
GTATTCCACTCACAAGTCAA+AGG + chr1_2:63494615-63494634 None:intergenic 40.0%
TCTATGTGCATCCATATGCA+TGG - chr1_2:63494765-63494784 Msa0084190:intron 40.0%
TAGATAGCTCACCATGCATA+TGG + chr1_2:63494779-63494798 None:intergenic 40.0%
TGCATGCTAAATCCTGATAC+TGG - chr1_2:63494924-63494943 Msa0084190:CDS 40.0%
TCATCACTTGAACCAGTATC+AGG + chr1_2:63494939-63494958 None:intergenic 40.0%
! TGGTTCAAGTGATGATGACT+TGG - chr1_2:63494944-63494963 Msa0084190:CDS 40.0%
! TTCAAGTGATGATGACTTGG+AGG - chr1_2:63494947-63494966 Msa0084190:CDS 40.0%
TCTGAAAGCTGGCCCAATAT+TGG + chr1_2:63486324-63486343 None:intergenic 45.0%
!! AGGAAATATGGTGGTGGACA+TGG + chr1_2:63486379-63486398 None:intergenic 45.0%
AATTGTGCGAAGCACGTAGT+AGG + chr1_2:63486716-63486735 None:intergenic 45.0%
AAAGGGCAGCAGTATTTGGT+TGG - chr1_2:63486878-63486897 Msa0084190:intron 45.0%
GCAGTATTTGGTTGGATCAC+TGG - chr1_2:63486886-63486905 Msa0084190:intron 45.0%
ACATGTTGTTGGGAACGTCT+TGG - chr1_2:63486924-63486943 Msa0084190:intron 45.0%
TAGAGCAGAAGCCTAACTCT+TGG + chr1_2:63487172-63487191 None:intergenic 45.0%
CCGCGGAAATAGTAATCTTC+AGG - chr1_2:63487237-63487256 Msa0084190:intron 45.0%
! TGGTATAACCACCGTTTTGC+TGG - chr1_2:63487435-63487454 Msa0084190:intron 45.0%
!! CTTCTGATGATGGTCGGAAT+TGG - chr1_2:63487623-63487642 Msa0084190:intron 45.0%
!! CTTGGCTTTCTGGATTAGCA+TGG - chr1_2:63488066-63488085 Msa0084190:intron 45.0%
! TACTCACAGCTGGTTTCACA+AGG + chr1_2:63488420-63488439 None:intergenic 45.0%
AGCATCAAGCTCAACCAATC+AGG - chr1_2:63488735-63488754 Msa0084190:CDS 45.0%
GATGCTCCCTTTGAATGCAA+AGG - chr1_2:63489095-63489114 Msa0084190:intron 45.0%
ATCAGCTATGATCCAGAAGC+GGG + chr1_2:63489330-63489349 None:intergenic 45.0%
GCTTCTGGATCATAGCTGAT+TGG - chr1_2:63489330-63489349 Msa0084190:intron 45.0%
CACACTTCCTCACTAGCAAA+AGG - chr1_2:63489726-63489745 Msa0084190:intron 45.0%
CGCAACCATTAACACACAAC+TGG - chr1_2:63490192-63490211 Msa0084190:intron 45.0%
ACACACAACTGGTTGTCATG+TGG - chr1_2:63490203-63490222 Msa0084190:intron 45.0%
CACACAACTGGTTGTCATGT+GGG - chr1_2:63490204-63490223 Msa0084190:intron 45.0%
TATAGCATCTGCTCTGTGAC+CGG + chr1_2:63490268-63490287 None:intergenic 45.0%
GGTCTCATATTTGAGCCTAG+TGG + chr1_2:63490433-63490452 None:intergenic 45.0%
TACCAACTGAGCTAAGCTCA+CGG + chr1_2:63490831-63490850 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+AGG - chr1_2:63490831-63490850 Msa0084190:intron 45.0%
! ATGAGATCCACGTGATTTGC+CGG - chr1_2:63490989-63491008 Msa0084190:intron 45.0%
TTACGTCACTCCATTGGCAT+GGG + chr1_2:63491228-63491247 None:intergenic 45.0%
TTTACGTCACTCCATTGGCA+TGG + chr1_2:63491229-63491248 None:intergenic 45.0%
AAAGAGTGAAAGTCAGCGTG+AGG - chr1_2:63491463-63491482 Msa0084190:intron 45.0%
TTGCGATTCTGTCTCATGTG+TGG - chr1_2:63491580-63491599 Msa0084190:intron 45.0%
TGCGATTCTGTCTCATGTGT+GGG - chr1_2:63491581-63491600 Msa0084190:intron 45.0%
CTCATCTCAGAAACATGTCG+TGG - chr1_2:63492148-63492167 Msa0084190:intron 45.0%
ATCTCAGAAACATGTCGTGG+TGG - chr1_2:63492151-63492170 Msa0084190:intron 45.0%
!! GATGGTGGTACTTCCACTTT+TGG - chr1_2:63492470-63492489 Msa0084190:intron 45.0%
TCTGAAAGCTGACCCAAAAG+TGG + chr1_2:63492486-63492505 None:intergenic 45.0%
GGTCAGCTTTCAGATGAACA+CGG - chr1_2:63492492-63492511 Msa0084190:intron 45.0%
CAAATCTATGAGGAATGCCG+CGG - chr1_2:63493322-63493341 Msa0084190:intron 45.0%
CCGCGGAAATAGTAATCTTC+AGG - chr1_2:63487237-63487256 Msa0084190:intron 45.0%
CAGCAAAACACTGTGTATGC+CGG + chr1_2:63493498-63493517 None:intergenic 45.0%
!! CTTCTGATGATGGTCGGAAT+TGG - chr1_2:63487623-63487642 Msa0084190:intron 45.0%
CATCAGTATGGAGGGATCAA+AGG + chr1_2:63493758-63493777 None:intergenic 45.0%
!! CTTGGCTTTCTGGATTAGCA+TGG - chr1_2:63488066-63488085 Msa0084190:intron 45.0%
ACTATGCAGGTACCATACCT+AGG - chr1_2:63494207-63494226 Msa0084190:intron 45.0%
TAATGCCAAATGAGCCACCT+AGG + chr1_2:63494227-63494246 None:intergenic 45.0%
TAATGGCAATACCAGGAGTC+AGG + chr1_2:63494344-63494363 None:intergenic 45.0%
AGCATCAAGCTCAACCAATC+AGG - chr1_2:63488735-63488754 Msa0084190:CDS 45.0%
GCTGGGGCAAATTCAATATC+TGG - chr1_2:63494564-63494583 Msa0084190:intron 45.0%
!! TGAGTCCTTTGACTTGTGAG+TGG - chr1_2:63488972-63488991 Msa0084190:intron 45.0%
CTTTGCATTCAAAGGGAGCA+TGG + chr1_2:63489097-63489116 None:intergenic 45.0%
CATGCTCCCTTTGAATGCAA+AGG - chr1_2:63494733-63494752 Msa0084190:intron 45.0%
! AATTCAGAAGCGGGTCTTGT+TGG + chr1_2:63494977-63494996 None:intergenic 45.0%
!! AAAAAGATTTATAATAAATA+AGG - chr1_2:63490622-63490641 Msa0084190:intron 5.0%
!! AAAAGATTTATAATAAATAA+GGG - chr1_2:63490623-63490642 Msa0084190:intron 5.0%
!!! TTTTTTAAATACTTTTTTTA+AGG - chr1_2:63491281-63491300 Msa0084190:intron 5.0%
!!! TTTTTAAATACTTTTTTTAA+GGG - chr1_2:63491282-63491301 Msa0084190:intron 5.0%
!!! AAAAAAAAACAATTTTTTTA+AGG - chr1_2:63491393-63491412 Msa0084190:intron 5.0%
GGCCAGCTTTCAGATGAACA+TGG - chr1_2:63486330-63486349 Msa0084190:intron 50.0%
GGCCATGTTCATCTGAAAGC+TGG + chr1_2:63486335-63486354 None:intergenic 50.0%
!! TGGTGGTGGACATGGTAACA+AGG + chr1_2:63486371-63486390 None:intergenic 50.0%
TGACAACATCTGCCTGACAG+AGG + chr1_2:63486849-63486868 None:intergenic 50.0%
CAGTCCCACATTAAGAGGCA+TGG - chr1_2:63487378-63487397 Msa0084190:intron 50.0%
! TTGGTGTAGGCTTGGCTTTC+TGG - chr1_2:63488056-63488075 Msa0084190:intron 50.0%
!! TGGATTAGCATGGGCACCTT+GGG - chr1_2:63488076-63488095 Msa0084190:intron 50.0%
! GCTAGTGAGGAAGTGTGTGT+TGG + chr1_2:63489723-63489742 None:intergenic 50.0%
! TGGCACTCCTTTTGCTAGTG+AGG + chr1_2:63489736-63489755 None:intergenic 50.0%
! CATCACTTACGCCGTTGGTT+TGG + chr1_2:63490113-63490132 None:intergenic 50.0%
CTTGACATCACTTACGCCGT+TGG + chr1_2:63490118-63490137 None:intergenic 50.0%
TGTTAATGGTTGCGGCATGG+AGG + chr1_2:63490186-63490205 None:intergenic 50.0%
GTGTGTTAATGGTTGCGGCA+TGG + chr1_2:63490189-63490208 None:intergenic 50.0%
ACCAACTGAGCTAAGCTCAC+GGG + chr1_2:63490830-63490849 None:intergenic 50.0%
GATCGCCCTTCCATTTCTTG+AGG + chr1_2:63491166-63491185 None:intergenic 50.0%
GGGACATGGCATACATGGAT+CGG + chr1_2:63491208-63491227 None:intergenic 50.0%
TATGCCATGTCCCATGCCAA+TGG - chr1_2:63491215-63491234 Msa0084190:intron 50.0%
GAGACAGAATCGCAACTCCT+CGG + chr1_2:63491575-63491594 None:intergenic 50.0%
! AGAAACATGTCGTGGTGGAG+TGG - chr1_2:63492156-63492175 Msa0084190:intron 50.0%
CTGCATTTCTGTCGCGTATG+TGG - chr1_2:63492847-63492866 Msa0084190:intron 50.0%
TTTCTGTCGCGTATGTGGTG+AGG - chr1_2:63492852-63492871 Msa0084190:intron 50.0%
! CGGCATACACAGTGTTTTGC+TGG - chr1_2:63493496-63493515 Msa0084190:intron 50.0%
! TTGGTGTAGGCTTGGCTTTC+TGG - chr1_2:63488056-63488075 Msa0084190:intron 50.0%
!! TGGATTAGCATGGGCACCTT+GGG - chr1_2:63488076-63488095 Msa0084190:intron 50.0%
ATGCAGGTACCATACCTAGG+TGG - chr1_2:63494210-63494229 Msa0084190:intron 50.0%
CCAAATGAGCCACCTAGGTA+TGG + chr1_2:63494222-63494241 None:intergenic 50.0%
CCATACCTAGGTGGCTCATT+TGG - chr1_2:63494219-63494238 Msa0084190:intron 50.0%
TACTCACGGCAGGTTTCTCA+AGG + chr1_2:63494257-63494276 None:intergenic 50.0%
GAATCAATGGTCCTGACTCC+TGG - chr1_2:63494330-63494349 Msa0084190:CDS 50.0%
CTGCATCTCTGTCGCGTATG+TGG - chr1_2:63486765-63486784 Msa0084190:CDS 55.0%
!! CTGGATTAGCATGGGCACCT+TGG - chr1_2:63488075-63488094 Msa0084190:intron 55.0%
CAACACAGAAGACCCGCTTC+TGG - chr1_2:63489315-63489334 Msa0084190:intron 55.0%
GTTGGGGGGGCTTAACCATT+TGG + chr1_2:63489848-63489867 None:intergenic 55.0%
! CTGTGACCGGCTTCCTACAA+AGG + chr1_2:63490255-63490274 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+GGG + chr1_2:63490829-63490848 None:intergenic 55.0%
CATGGATCCGGCAAATCACG+TGG + chr1_2:63490999-63491018 None:intergenic 55.0%
GGCATGGGACATGGCATACA+TGG + chr1_2:63491213-63491232 None:intergenic 55.0%
CACTCCATTGGCATGGGACA+TGG + chr1_2:63491222-63491241 None:intergenic 55.0%
CCTGGTTGCGTACCTGTTTG+CGG - chr1_2:63491621-63491640 Msa0084190:intron 55.0%
CTGGTTGCGTACCTGTTTGC+GGG - chr1_2:63491622-63491641 Msa0084190:intron 55.0%
TGGTTGCGTACCTGTTTGCG+GGG - chr1_2:63491623-63491642 Msa0084190:intron 55.0%
CAGTCCTGCATTAAGAGGCG+TGG - chr1_2:63493439-63493458 Msa0084190:intron 55.0%
AGAGCCACGCCTCTTAATGC+AGG + chr1_2:63493446-63493465 None:intergenic 55.0%
!! CTGGATTAGCATGGGCACCT+TGG - chr1_2:63488075-63488094 Msa0084190:intron 55.0%
TGGTTGCGGCATGGAGGAAG+CGG + chr1_2:63490180-63490199 None:intergenic 60.0%
CCCCGTGAGCTTAGCTCAGT+TGG - chr1_2:63490826-63490845 Msa0084190:intron 60.0%
GCAAGAGCGAGTGTAGCACG+TGG - chr1_2:63491485-63491504 Msa0084190:intron 60.0%
CCGCAAACAGGTACGCAACC+AGG + chr1_2:63491624-63491643 None:intergenic 60.0%
GTACCTGTTTGCGGGGTGCA+TGG - chr1_2:63491630-63491649 Msa0084190:intron 60.0%
CTTGGCTTACACTCCGCGCA+CGG + chr1_2:63491658-63491677 None:intergenic 60.0%
TTGCGGCATGGAGGAAGCGG+TGG + chr1_2:63490177-63490196 None:intergenic 65.0%
!! ACCAGGCGCATGGTGCTGCA+CGG + chr1_2:63491607-63491626 None:intergenic 65.0%
CAGGTACGCAACCAGGCGCA+TGG + chr1_2:63491617-63491636 None:intergenic 65.0%
GTGCCATGCACCCCGCAAAC+AGG + chr1_2:63491636-63491655 None:intergenic 65.0%
GCCGTGCAGCACCATGCGCC+TGG - chr1_2:63491603-63491622 Msa0084190:intron 75.0%
GGGGTGCATGGCACCGTGCG+CGG - chr1_2:63491642-63491661 Msa0084190:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 63486025 63495004 63486025 ID=Msa0084190;Name=Msa0084190
chr1_2 mRNA 63486025 63495004 63486025 ID=Msa0084190-mRNA-1;Parent=Msa0084190;Name=Msa0084190-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.36|0.23|1|0.88|0.84|26|0|813
chr1_2 exon 63494822 63495004 63494822 ID=Msa0084190-mRNA-1:exon:21302;Parent=Msa0084190-mRNA-1
chr1_2 exon 63494627 63494738 63494627 ID=Msa0084190-mRNA-1:exon:21301;Parent=Msa0084190-mRNA-1
chr1_2 exon 63494243 63494355 63494243 ID=Msa0084190-mRNA-1:exon:21300;Parent=Msa0084190-mRNA-1
chr1_2 exon 63494051 63494173 63494051 ID=Msa0084190-mRNA-1:exon:21299;Parent=Msa0084190-mRNA-1
chr1_2 exon 63493771 63493943 63493771 ID=Msa0084190-mRNA-1:exon:21298;Parent=Msa0084190-mRNA-1
chr1_2 exon 63493573 63493648 63493573 ID=Msa0084190-mRNA-1:exon:21297;Parent=Msa0084190-mRNA-1
chr1_2 exon 63493368 63493454 63493368 ID=Msa0084190-mRNA-1:exon:21296;Parent=Msa0084190-mRNA-1
chr1_2 exon 63493046 63493126 63493046 ID=Msa0084190-mRNA-1:exon:21295;Parent=Msa0084190-mRNA-1
chr1_2 exon 63492932 63492964 63492932 ID=Msa0084190-mRNA-1:exon:21294;Parent=Msa0084190-mRNA-1
chr1_2 exon 63492597 63492650 63492597 ID=Msa0084190-mRNA-1:exon:21293;Parent=Msa0084190-mRNA-1
chr1_2 exon 63492273 63492314 63492273 ID=Msa0084190-mRNA-1:exon:21292;Parent=Msa0084190-mRNA-1
chr1_2 exon 63492062 63492121 63492062 ID=Msa0084190-mRNA-1:exon:21291;Parent=Msa0084190-mRNA-1
chr1_2 exon 63491890 63491951 63491890 ID=Msa0084190-mRNA-1:exon:21290;Parent=Msa0084190-mRNA-1
chr1_2 exon 63488685 63488871 63488685 ID=Msa0084190-mRNA-1:exon:21289;Parent=Msa0084190-mRNA-1
chr1_2 exon 63488465 63488576 63488465 ID=Msa0084190-mRNA-1:exon:21288;Parent=Msa0084190-mRNA-1
chr1_2 exon 63488161 63488273 63488161 ID=Msa0084190-mRNA-1:exon:21287;Parent=Msa0084190-mRNA-1
chr1_2 exon 63487951 63488073 63487951 ID=Msa0084190-mRNA-1:exon:21286;Parent=Msa0084190-mRNA-1
chr1_2 exon 63487669 63487841 63487669 ID=Msa0084190-mRNA-1:exon:21285;Parent=Msa0084190-mRNA-1
chr1_2 exon 63487512 63487587 63487512 ID=Msa0084190-mRNA-1:exon:21284;Parent=Msa0084190-mRNA-1
chr1_2 exon 63487303 63487389 63487303 ID=Msa0084190-mRNA-1:exon:21283;Parent=Msa0084190-mRNA-1
chr1_2 exon 63487086 63487166 63487086 ID=Msa0084190-mRNA-1:exon:21282;Parent=Msa0084190-mRNA-1
chr1_2 exon 63486970 63487002 63486970 ID=Msa0084190-mRNA-1:exon:21281;Parent=Msa0084190-mRNA-1
chr1_2 exon 63486760 63486813 63486760 ID=Msa0084190-mRNA-1:exon:21280;Parent=Msa0084190-mRNA-1
chr1_2 exon 63486605 63486646 63486605 ID=Msa0084190-mRNA-1:exon:21279;Parent=Msa0084190-mRNA-1
chr1_2 exon 63486427 63486486 63486427 ID=Msa0084190-mRNA-1:exon:21278;Parent=Msa0084190-mRNA-1
chr1_2 exon 63486025 63486126 63486025 ID=Msa0084190-mRNA-1:exon:21277;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63494822 63495004 63494822 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63494627 63494738 63494627 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63494243 63494355 63494243 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63494051 63494173 63494051 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63493771 63493943 63493771 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63493573 63493648 63493573 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63493368 63493454 63493368 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63493046 63493126 63493046 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63492932 63492964 63492932 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63492597 63492650 63492597 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63492273 63492314 63492273 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63492062 63492121 63492062 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63491890 63491951 63491890 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63488685 63488871 63488685 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63488465 63488576 63488465 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63488161 63488273 63488161 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63487951 63488073 63487951 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63487669 63487841 63487669 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63487512 63487587 63487512 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63487303 63487389 63487303 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63487086 63487166 63487086 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63486970 63487002 63486970 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63486760 63486813 63486760 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63486605 63486646 63486605 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63486427 63486486 63486427 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
chr1_2 CDS 63486025 63486126 63486025 ID=Msa0084190-mRNA-1:cds;Parent=Msa0084190-mRNA-1
Gene Sequence

>Msa0084190

ATGTCGTGGTGGAGTGGATTCTTTGAGCTGAGACCATTATTCCACTTGTTACTTCCACTAAGCATTCATTGGATTGCTGAAGAAATGACAGTTTCTGTTCTTGTTGATGTTACAACCACTGCTTTATGTCCTCAACAATCATCTTGCTCCAAAGCCATTTACATTAATGGTCTTCAAGAAACAATTGCTGGAATTTTCAAGATGATGGTACTTCCAATATTGGGCCAGCTTTCAGATGAACATGGCCGCAAACCTTTACTCCTTGTTACCATGTCCACCACCATATTTCCTTTTGCTTTACTTGCTTGGAATCAATCTGAGGAATTTGTATATGCCTACTACGTGCTTCGCACAATTTCGTATATAATCAGTAAAGGAAGTATTTTCTGCATCTCTGTCGCGTATGTGGCAGATGTTGTCAATGAAAACAAAAGGGCAGCAGTATTTGGTTGGATCACTGGTCTCTTTTCTGCTTCACATGTTGTTGGGAACGTCTTGGCTCGATTTCTTCCTCAAAACTACATTTTTGTGGTTTCAATAGCACTATTGATATTTTGTCCAGTTTATATGCATTTCTTCCTAGTTGAAACTGTAAAACTAGCTCCCACAAATATCCAAGAGTTAGGCTTCTGCTCTAAAGTTAGTTATGTTGTTAGCCGAAGATATAAATCTATGAGGAATGCCGCGGAAATAGTAATCTTCAGTCCCACATTAAGAGGCATGGCTATTGTCTCTTTCTTTTATGAGTTGGGAATGTCTGGTATAACCACCGTTTTGCTGTACTATTTGAAAGCTGTTTTTGGTTTTAACAAAAATCAGTTCTCAGAACTTCTGATGATGGTCGGAATTGGTTCAATCTTTTCACAGATTGTGTTACTTCCAATACTTAATCCATTGGTTGGAGAGAAAGTGATTCTATGCTCAGCCTTACTTGCATCAATAGCATATGCTTGGCTTTCTGGATTAGCATGGGCACCTTGGGTACCATATTTAAGTGCCTCATTTGGCATTATCTATGTCCTTGTGAAACCAGCTACATATGCTATCATTTCAAGAGCATCAAGCTCAACCAATCAGGGAAAAGCACAAACTTTTATTGCTGGGGCACAATCTATATCTGATTTACTATCACCAATTCATTGTTTTTATCTAGCGATGCTCCCTTTGAATGCAAAGGTTTTAGCATTATATGTGCATCTAAACATGTCGTGGTGGAGTGGATTCTTTGAGCTGAGACCTTTATTTCACTTGTTACTTCCACTAAGCATTCATTGGATTGCTGAAGCAATGACAGTTTCTGTTCTTGTTGATGTTACAACATCTGCTTTGTGCCCTCAACAATCATCTTGCTCCAAAGCTATTTACATCAATGGCCTTCAACAAACAATTACTGGAATTTTCAAGATGGTGGTACTTCCACTTTTGGGTCAGCTTTCAGATGAACACGGTCGCAAACCTCTACTCCTTCTTACCATATCCACCAGTATAATACCTTTTGCTTTACTTGCTTGGAATCAATCTAAGGAATTTGTATATGCCTACTATGTGCTTCGCACATTTTCGCATATAATCAGTCAAGGAAGTATCTTCTGCATTTCTGTCGCGTATGTGGCAGATGTTGTTCATGAAAGCAAAAGAGCAGCAGTATTTAGTTGGATCACTGGTCTCTCTTCTGCTGCACATGTTATTGGGAACGTCTTTGCTCGGTTTCTTCCTCAAAACTGCATTTTTGTGGTTTCAATAGCACTATTGACCTTTTGTCCACTTTATATGCATTTCTTCCTAGTTGAAACTGTGAAACTGGATACAGGAAAGAACCAAGAGTTAGGCTTCTGTACTAGAGTTATTTATGTTCTTAGACGAAGATACAAATCTATGAGGAATGCCGCGGAAATAGTAATCTTCAGTCCTGCATTAAGAGGCGTGGCTCTTGTCTCTTTCTTTTATAAGTTGGGAATGACCGGCATACACAGTGTTTTGCTGTACTATTTCAAAGCTGTTTTTGGTTTCAACAAAAATCAGTTCTCAGAACTTCTGATGATGGTCGGAATTGGTTCAATCTTTTCTCAGATTGTATTGCTTCCAATACTTAATCCTTTGGTTGGAGAGAAAGTGATTCTATGCTCAGCCTTACTTGCATCAATAGCATATGCTTGGCTTTCTGGATTAGCATGGGCACCTTGGGTACCATACCTAGGTGGCTCATTTGGCATTATCTATATCCTTGAGAAACCTGCCACATATGCTATTATTTCAAAAGCATCAAGCTCAACCAATCAGGGAAAAGCACAAACTTTTATTGCTGGGGCAAATTCAATATCTGGTTTACTATCACCAATTATAATTTCTCTGATTTTTGCTTGCATGCTAAATCCTGATACTGGTTCAAGTGATGATGACTTGGAGGATAACCAACAAGACCCGCTTCTGAATTATAACTGA
Protein sequence

>Msa0084190

MSWWSGFFELRPLFHLLLPLSIHWIAEEMTVSVLVDVTTTALCPQQSSCSKAIYINGLQETIAGIFKMMVLPILGQLSDEHGRKPLLLVTMSTTIFPFALLAWNQSEEFVYAYYVLRTISYIISKGSIFCISVAYVADVVNENKRAAVFGWITGLFSASHVVGNVLARFLPQNYIFVVSIALLIFCPVYMHFFLVETVKLAPTNIQELGFCSKVSYVVSRRYKSMRNAAEIVIFSPTLRGMAIVSFFYELGMSGITTVLLYYLKAVFGFNKNQFSELLMMVGIGSIFSQIVLLPILNPLVGEKVILCSALLASIAYAWLSGLAWAPWVPYLSASFGIIYVLVKPATYAIISRASSSTNQGKAQTFIAGAQSISDLLSPIHCFYLAMLPLNAKVLALYVHLNMSWWSGFFELRPLFHLLLPLSIHWIAEAMTVSVLVDVTTSALCPQQSSCSKAIYINGLQQTITGIFKMVVLPLLGQLSDEHGRKPLLLLTISTSIIPFALLAWNQSKEFVYAYYVLRTFSHIISQGSIFCISVAYVADVVHESKRAAVFSWITGLSSAAHVIGNVFARFLPQNCIFVVSIALLTFCPLYMHFFLVETVKLDTGKNQELGFCTRVIYVLRRRYKSMRNAAEIVIFSPALRGVALVSFFYKLGMTGIHSVLLYYFKAVFGFNKNQFSELLMMVGIGSIFSQIVLLPILNPLVGEKVILCSALLASIAYAWLSGLAWAPWVPYLGGSFGIIYILEKPATYAIISKASSSTNQGKAQTFIAGANSISGLLSPIIISLIFACMLNPDTGSSDDDLEDNQQDPLLNYN*