Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1318120 | XP_013444796.1 | 94.374 | 551 | 27 | 2 | 1 | 550 | 1 | 548 | 0.0 | 1037 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1318120 | sp|Q8VZL4|MSL1_ARATH | 67.010 | 388 | 128 | 0 | 162 | 549 | 108 | 495 | 0.0 | 555 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1318120 | A0A072TNQ4 | 94.374 | 551 | 27 | 2 | 1 | 550 | 1 | 548 | 0.0 | 1037 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008340 | Msa1318120 | 0.805742 | 1.152375e-49 | -8.615850e-47 |
| Msa0011720 | Msa1318120 | 0.815322 | 9.809695e-52 | -8.615850e-47 |
| Msa0024680 | Msa1318120 | 0.812933 | 3.304336e-51 | -8.615850e-47 |
| Msa0089360 | Msa1318120 | 0.808696 | 2.728048e-50 | -8.615850e-47 |
| Msa0094950 | Msa1318120 | 0.800405 | 1.463918e-48 | -8.615850e-47 |
| Msa0096670 | Msa1318120 | 0.823541 | 1.310687e-53 | -8.615850e-47 |
| Msa0105420 | Msa1318120 | 0.828926 | 6.852915e-55 | -8.615850e-47 |
| Msa0109950 | Msa1318120 | 0.807446 | 5.034760e-50 | -8.615850e-47 |
| Msa0110970 | Msa1318120 | 0.802831 | 4.654495e-49 | -8.615850e-47 |
| Msa0114540 | Msa1318120 | -0.818375 | 2.025657e-52 | -8.615850e-47 |
| Msa0120330 | Msa1318120 | 0.805528 | 1.277946e-49 | -8.615850e-47 |
| Msa0616020 | Msa1318120 | 0.800375 | 1.484498e-48 | -8.615850e-47 |
| Msa0638690 | Msa1318120 | 0.803055 | 4.184302e-49 | -8.615850e-47 |
| Msa0669850 | Msa1318120 | 0.804282 | 2.328086e-49 | -8.615850e-47 |
| Msa0670980 | Msa1318120 | 0.815144 | 1.074320e-51 | -8.615850e-47 |
| Msa0680240 | Msa1318120 | 0.804149 | 2.480792e-49 | -8.615850e-47 |
| Msa0684500 | Msa1318120 | 0.800754 | 1.242689e-48 | -8.615850e-47 |
| Msa0697400 | Msa1318120 | 0.800610 | 1.329238e-48 | -8.615850e-47 |
| Msa0741900 | Msa1318120 | 0.801805 | 7.569726e-49 | -8.615850e-47 |
| Msa0797750 | Msa1318120 | 0.802068 | 6.686920e-49 | -8.615850e-47 |
| Msa0804680 | Msa1318120 | 0.810574 | 1.077525e-50 | -8.615850e-47 |
| Msa0124340 | Msa1318120 | 0.802090 | 6.614650e-49 | -8.615850e-47 |
| Msa0143080 | Msa1318120 | 0.824313 | 8.637074e-54 | -8.615850e-47 |
| Msa0168100 | Msa1318120 | 0.809222 | 2.104657e-50 | -8.615850e-47 |
| Msa0172350 | Msa1318120 | 0.813307 | 2.735072e-51 | -8.615850e-47 |
| Msa0185590 | Msa1318120 | 0.803166 | 3.968276e-49 | -8.615850e-47 |
| Msa0194280 | Msa1318120 | 0.820652 | 6.126648e-53 | -8.615850e-47 |
| Msa0207000 | Msa1318120 | 0.820313 | 7.325994e-53 | -8.615850e-47 |
| Msa0222920 | Msa1318120 | 0.825477 | 4.588730e-54 | -8.615850e-47 |
| Msa0227510 | Msa1318120 | 0.819199 | 1.316694e-52 | -8.615850e-47 |
| Msa0236980 | Msa1318120 | 0.822491 | 2.303182e-53 | -8.615850e-47 |
| Msa1235630 | Msa1318120 | 0.803216 | 3.875697e-49 | -8.615850e-47 |
| Msa1237030 | Msa1318120 | 0.840735 | 7.269870e-58 | -8.615850e-47 |
| Msa1243010 | Msa1318120 | 0.804569 | 2.028458e-49 | -8.615850e-47 |
| Msa1255190 | Msa1318120 | 0.801668 | 8.076511e-49 | -8.615850e-47 |
| Msa1265070 | Msa1318120 | 0.818720 | 1.691662e-52 | -8.615850e-47 |
| Msa1267840 | Msa1318120 | 0.822524 | 2.262723e-53 | -8.615850e-47 |
| Msa1274520 | Msa1318120 | 0.811541 | 6.649057e-51 | -8.615850e-47 |
| Msa1280130 | Msa1318120 | 0.811778 | 5.903937e-51 | -8.615850e-47 |
| Msa1283990 | Msa1318120 | 0.816387 | 5.676211e-52 | -8.615850e-47 |
| Msa1284300 | Msa1318120 | 0.801789 | 7.629894e-49 | -8.615850e-47 |
| Msa1284490 | Msa1318120 | 0.813466 | 2.523973e-51 | -8.615850e-47 |
| Msa1295630 | Msa1318120 | 0.824708 | 6.974163e-54 | -8.615850e-47 |
| Msa1299360 | Msa1318120 | 0.805698 | 1.177572e-49 | -8.615850e-47 |
| Msa1315870 | Msa1318120 | 0.813922 | 2.002315e-51 | -8.615850e-47 |
| Msa1318120 | Msa1320740 | 0.800840 | 1.193524e-48 | -8.615850e-47 |
| Msa1318120 | Msa1337730 | 0.808845 | 2.535601e-50 | -8.615850e-47 |
| Msa1318120 | Msa1362510 | 0.823539 | 1.311775e-53 | -8.615850e-47 |
| Msa1318120 | Msa1363590 | 0.804147 | 2.483773e-49 | -8.615850e-47 |
| Msa1318120 | Msa1390310 | 0.815356 | 9.640789e-52 | -8.615850e-47 |
| Msa1318120 | Msa1417530 | 0.810379 | 1.187143e-50 | -8.615850e-47 |
| Msa1318120 | Msa1444450 | 0.803578 | 3.261218e-49 | -8.615850e-47 |
| Msa1318120 | Msa1466460 | 0.823417 | 1.400873e-53 | -8.615850e-47 |
| Msa0369570 | Msa1318120 | 0.825245 | 5.206362e-54 | -8.615850e-47 |
| Msa0415810 | Msa1318120 | 0.800617 | 1.325253e-48 | -8.615850e-47 |
| Msa0423360 | Msa1318120 | -0.813144 | 2.969172e-51 | -8.615850e-47 |
| Msa0437710 | Msa1318120 | 0.811238 | 7.735984e-51 | -8.615850e-47 |
| Msa0993530 | Msa1318120 | 0.825270 | 5.135435e-54 | -8.615850e-47 |
| Msa0996080 | Msa1318120 | 0.833295 | 5.790886e-56 | -8.615850e-47 |
| Msa1018050 | Msa1318120 | 0.825148 | 5.488587e-54 | -8.615850e-47 |
| Msa1020710 | Msa1318120 | 0.812441 | 4.232485e-51 | -8.615850e-47 |
| Msa1026760 | Msa1318120 | 0.813156 | 2.952216e-51 | -8.615850e-47 |
| Msa1026790 | Msa1318120 | 0.815536 | 8.791052e-52 | -8.615850e-47 |
| Msa1037920 | Msa1318120 | 0.822964 | 1.786734e-53 | -8.615850e-47 |
| Msa1044340 | Msa1318120 | 0.821456 | 3.998045e-53 | -8.615850e-47 |
| Msa1049010 | Msa1318120 | 0.827301 | 1.687202e-54 | -8.615850e-47 |
| Msa1089530 | Msa1318120 | 0.812694 | 3.725992e-51 | -8.615850e-47 |
| Msa0243690 | Msa1318120 | 0.805208 | 1.491627e-49 | -8.615850e-47 |
| Msa0259560 | Msa1318120 | 0.819472 | 1.140871e-52 | -8.615850e-47 |
| Msa0260240 | Msa1318120 | 0.801205 | 1.005030e-48 | -8.615850e-47 |
| Msa0260280 | Msa1318120 | 0.802086 | 6.627374e-49 | -8.615850e-47 |
| Msa0264350 | Msa1318120 | 0.839992 | 1.136744e-57 | -8.615850e-47 |
| Msa0267760 | Msa1318120 | 0.812532 | 4.042917e-51 | -8.615850e-47 |
| Msa0274290 | Msa1318120 | 0.804439 | 2.159094e-49 | -8.615850e-47 |
| Msa0277530 | Msa1318120 | 0.812228 | 4.712653e-51 | -8.615850e-47 |
| Msa0278620 | Msa1318120 | 0.813673 | 2.271799e-51 | -8.615850e-47 |
| Msa0281360 | Msa1318120 | 0.808736 | 2.674477e-50 | -8.615850e-47 |
| Msa0296760 | Msa1318120 | 0.811743 | 6.008335e-51 | -8.615850e-47 |
| Msa0302450 | Msa1318120 | 0.806526 | 7.881657e-50 | -8.615850e-47 |
| Msa0304260 | Msa1318120 | 0.816438 | 5.530192e-52 | -8.615850e-47 |
| Msa0304300 | Msa1318120 | 0.829957 | 3.848705e-55 | -8.615850e-47 |
| Msa0304920 | Msa1318120 | 0.808188 | 3.500652e-50 | -8.615850e-47 |
| Msa0314210 | Msa1318120 | 0.820697 | 5.979956e-53 | -8.615850e-47 |
| Msa0318000 | Msa1318120 | 0.813070 | 3.083284e-51 | -8.615850e-47 |
| Msa0323180 | Msa1318120 | 0.820869 | 5.461545e-53 | -8.615850e-47 |
| Msa0328210 | Msa1318120 | 0.820567 | 6.405924e-53 | -8.615850e-47 |
| Msa0334040 | Msa1318120 | 0.803037 | 4.220100e-49 | -8.615850e-47 |
| Msa0335040 | Msa1318120 | 0.804674 | 1.929091e-49 | -8.615850e-47 |
| Msa0342100 | Msa1318120 | 0.802985 | 4.326901e-49 | -8.615850e-47 |
| Msa0342200 | Msa1318120 | 0.815176 | 1.057159e-51 | -8.615850e-47 |
| Msa1129980 | Msa1318120 | 0.809530 | 1.808135e-50 | -8.615850e-47 |
| Msa1134110 | Msa1318120 | 0.801767 | 7.710190e-49 | -8.615850e-47 |
| Msa1136230 | Msa1318120 | 0.802020 | 6.839140e-49 | -8.615850e-47 |
| Msa1165870 | Msa1318120 | 0.800609 | 1.330022e-48 | -8.615850e-47 |
| Msa1177830 | Msa1318120 | 0.956521 | 2.424527e-114 | -8.615850e-47 |
| Msa1211090 | Msa1318120 | 0.811602 | 6.449403e-51 | -8.615850e-47 |
| Msa0503590 | Msa1318120 | 0.802004 | 6.890094e-49 | -8.615850e-47 |
| Msa0509970 | Msa1318120 | 0.811966 | 5.373482e-51 | -8.615850e-47 |
| Msa0521880 | Msa1318120 | 0.802304 | 5.977291e-49 | -8.615850e-47 |
| Msa0526710 | Msa1318120 | 0.813865 | 2.061673e-51 | -8.615850e-47 |
| Msa0527590 | Msa1318120 | 0.812411 | 4.297665e-51 | -8.615850e-47 |
| Msa0535030 | Msa1318120 | 0.806861 | 6.698329e-50 | -8.615850e-47 |
| Msa0535060 | Msa1318120 | 0.807824 | 4.184669e-50 | -8.615850e-47 |
| Msa0560470 | Msa1318120 | 0.806040 | 9.977967e-50 | -8.615850e-47 |
| Msa0574890 | Msa1318120 | 0.808942 | 2.417015e-50 | -8.615850e-47 |
| Msa0591770 | Msa1318120 | 0.809485 | 1.848436e-50 | -8.615850e-47 |
| Msa0845750 | Msa1318120 | 0.802964 | 4.370013e-49 | -8.615850e-47 |
| Msa0862100 | Msa1318120 | 0.804583 | 2.015226e-49 | -8.615850e-47 |
| Msa0872310 | Msa1318120 | 0.807748 | 4.343232e-50 | -8.615850e-47 |
| Msa0883030 | Msa1318120 | 0.815200 | 1.044476e-51 | -8.615850e-47 |
| Msa0890250 | Msa1318120 | 0.818626 | 1.776791e-52 | -8.615850e-47 |
| Msa0893810 | Msa1318120 | 0.811246 | 7.705763e-51 | -8.615850e-47 |
| Msa0896210 | Msa1318120 | 0.829827 | 4.139273e-55 | -8.615850e-47 |
| Msa0896220 | Msa1318120 | 0.825196 | 5.348544e-54 | -8.615850e-47 |
| Msa0930780 | Msa1318120 | 0.839914 | 1.191286e-57 | -8.615850e-47 |
| Msa0955300 | Msa1318120 | 0.823306 | 1.487257e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1318120 | MtrunA17_Chr8g0348501 | 94.374 | 551 | 27 | 2 | 1 | 550 | 1 | 548 | 0.0 | 1037 |
| Msa1318120 | MtrunA17_Chr3g0132961 | 23.111 | 225 | 163 | 4 | 330 | 544 | 239 | 463 | 2.36e-12 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1318120 | AT4G00290.1 | 67.010 | 388 | 128 | 0 | 162 | 549 | 108 | 495 | 0.0 | 555 |
| Msa1318120 | AT4G00234.1 | 54.167 | 264 | 113 | 2 | 105 | 368 | 7 | 262 | 4.00e-92 | 283 |
| Msa1318120 | AT1G58200.2 | 24.873 | 197 | 141 | 3 | 355 | 544 | 257 | 453 | 1.65e-13 | 73.9 |
| Msa1318120 | AT1G58200.1 | 24.873 | 197 | 141 | 3 | 355 | 544 | 257 | 453 | 1.65e-13 | 73.9 |
| Msa1318120 | AT5G10490.3 | 22.791 | 215 | 145 | 4 | 344 | 544 | 242 | 449 | 5.54e-12 | 68.9 |
| Msa1318120 | AT5G10490.1 | 22.791 | 215 | 145 | 4 | 344 | 544 | 244 | 451 | 5.75e-12 | 68.9 |
| Msa1318120 | AT5G10490.2 | 22.791 | 215 | 145 | 4 | 344 | 544 | 216 | 423 | 7.32e-12 | 68.6 |
Find 143 sgRNAs with CRISPR-Local
Find 372 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGACTCAGTTTAGAAATT+TGG | 0.094573 | 8_4:-20037032 | Msa1318120:CDS |
| CTCAATTTGAAGAGGGATTT+TGG | 0.122310 | 8_4:+20033192 | None:intergenic |
| TTGAGGAAATTTCACAAATA+TGG | 0.164828 | 8_4:-20036548 | Msa1318120:CDS |
| CTTTAATATCATTCGATATA+TGG | 0.170635 | 8_4:+20033152 | None:intergenic |
| GGGTGGTGATTCGGTTGTTT+CGG | 0.248572 | 8_4:-20036780 | Msa1318120:CDS |
| GGTGGTGATTCGGTTGTTTC+GGG | 0.258012 | 8_4:-20036779 | Msa1318120:CDS |
| CAGACTCAGTTTAGAAATTT+GGG | 0.265782 | 8_4:-20037031 | Msa1318120:CDS |
| CATATATCGAATGATATTAA+AGG | 0.266364 | 8_4:-20033151 | Msa1318120:CDS |
| AGAAATTTGGGTTCTTTATC+AGG | 0.275868 | 8_4:-20037019 | Msa1318120:CDS |
| GTTTAACAATGTCTGCTATT+AGG | 0.276214 | 8_4:-20037240 | Msa1318120:exon |
| GGAAGACCCAGTGCGATATT+TGG | 0.288817 | 8_4:-20036444 | Msa1318120:CDS |
| AAGAAAACAAATATTGAAAA+AGG | 0.312178 | 8_4:-20037523 | Msa1318120:five_prime_UTR |
| AATACAGTAATGACATTGTT+TGG | 0.312825 | 8_4:+20037288 | None:intergenic |
| TCTAATTCGACGATGACTAA+TGG | 0.316756 | 8_4:-20036905 | Msa1318120:CDS |
| TCTATTTGTGATTGGTATAA+TGG | 0.317516 | 8_4:-20035906 | Msa1318120:CDS |
| GCAAGATTCAATGACCCATT+AGG | 0.322768 | 8_4:+20037133 | None:intergenic |
| TAATGATTTGAACTGCTTGC+AGG | 0.324391 | 8_4:+20032136 | None:intergenic |
| TTTAATATCATTCGATATAT+GGG | 0.328592 | 8_4:+20033153 | None:intergenic |
| AATTATCACTCTAACCCTAA+TGG | 0.334727 | 8_4:-20037148 | Msa1318120:CDS |
| CAAGATTCAATGACCCATTA+GGG | 0.335100 | 8_4:+20037134 | None:intergenic |
| AATGAGTTCGGCACAATGAC+TGG | 0.346967 | 8_4:+20034280 | None:intergenic |
| GGTAAGAATGGCACGATAAT+CGG | 0.349808 | 8_4:+20033213 | None:intergenic |
| TCTATTGGTCTATTTGTGAT+TGG | 0.352282 | 8_4:-20035914 | Msa1318120:CDS |
| TGAGTCTGAGCAAACATCTT+AGG | 0.352880 | 8_4:+20037046 | None:intergenic |
| TCTTAACATGGTGGTCGTTC+CGG | 0.362031 | 8_4:-20036624 | Msa1318120:CDS |
| TTTCGGGTGATTTGGTTGAT+AGG | 0.363794 | 8_4:-20036763 | Msa1318120:CDS |
| CTGCTTCAAGGAAACTTGTC+AGG | 0.369298 | 8_4:-20036506 | Msa1318120:CDS |
| CATTTGTGAGAATGCCAAAA+AGG | 0.370440 | 8_4:+20036418 | None:intergenic |
| CTGTGTAGTCAGATATCATT+TGG | 0.375797 | 8_4:-20031944 | Msa1318120:three_prime_UTR |
| GGGTTCTTTATCAGGTCATA+GGG | 0.376925 | 8_4:-20037011 | Msa1318120:CDS |
| TGGGTTCTTTATCAGGTCAT+AGG | 0.377124 | 8_4:-20037012 | Msa1318120:CDS |
| CTAATTCGACGATGACTAAT+GGG | 0.378728 | 8_4:-20036904 | Msa1318120:CDS |
| GTGAGTGATGTGAAGGGTGG+GGG | 0.382712 | 8_4:-20036800 | Msa1318120:CDS |
| TGTGATTGGTATAATGGCTT+TGG | 0.384174 | 8_4:-20035900 | Msa1318120:CDS |
| CAAAATCCCTCTTCAAATTG+AGG | 0.387715 | 8_4:-20033191 | Msa1318120:CDS |
| TTCGGTTGTTTCGGGTGATT+TGG | 0.393366 | 8_4:-20036771 | Msa1318120:CDS |
| ATTATCACTCTAACCCTAAT+GGG | 0.397693 | 8_4:-20037147 | Msa1318120:CDS |
| GAAGGTCAAGTGGTGGAAAT+TGG | 0.405677 | 8_4:-20034340 | Msa1318120:CDS |
| ACTTTAACTGCTACTCTAGT+AGG | 0.408075 | 8_4:-20036593 | Msa1318120:CDS |
| CTAGACAAAATCTCGTCTAT+TGG | 0.408910 | 8_4:-20035929 | Msa1318120:CDS |
| ATCTCTTCATAGTTCAATCA+AGG | 0.411159 | 8_4:-20037203 | Msa1318120:CDS |
| TCAAGAAACTGTTGAGCATA+TGG | 0.413338 | 8_4:+20036659 | None:intergenic |
| AAGAATCATGGTGTTGCTCT+TGG | 0.420133 | 8_4:-20032114 | Msa1318120:CDS |
| GGTGTGAGTGATGTGAAGGG+TGG | 0.422401 | 8_4:-20036803 | Msa1318120:CDS |
| ACAATGACTGGGAACTTCTC+AGG | 0.423538 | 8_4:+20034292 | None:intergenic |
| TGGTATAATGGCTTTGGCTG+AGG | 0.423669 | 8_4:-20035894 | Msa1318120:CDS |
| CTGACGTTAGAAAATTGCTT+TGG | 0.433422 | 8_4:+20031973 | None:intergenic |
| ATATGCTGGTGATAAGGTTA+AGG | 0.437929 | 8_4:-20036702 | Msa1318120:CDS |
| AGTTTCATATGCTGGTGATA+AGG | 0.445569 | 8_4:-20036708 | Msa1318120:CDS |
| CTTAAATCCTCAATTTGAAG+AGG | 0.446210 | 8_4:+20033184 | None:intergenic |
| TGTGAGTGATGTGAAGGGTG+GGG | 0.447946 | 8_4:-20036801 | Msa1318120:CDS |
| TTTCCTTGAAGCAGAGAAAC+CGG | 0.450831 | 8_4:+20036515 | None:intergenic |
| GTGTGAGTGATGTGAAGGGT+GGG | 0.450840 | 8_4:-20036802 | Msa1318120:CDS |
| CTGCTGTTTCTTGTCACGCA+TGG | 0.451338 | 8_4:-20033083 | Msa1318120:CDS |
| CGCAATACCTTGCACCCACT+TGG | 0.452124 | 8_4:-20036069 | Msa1318120:CDS |
| CCTAGGTGAATTAAACCCTT+GGG | 0.455004 | 8_4:+20036961 | None:intergenic |
| CCAGACCCGATGAATACATT+CGG | 0.455688 | 8_4:+20036873 | None:intergenic |
| TATTTAATGCAGTGCTGTAA+TGG | 0.456761 | 8_4:-20036113 | Msa1318120:intron |
| CACATTGCCAAGTACGTCTC+TGG | 0.457162 | 8_4:+20034929 | None:intergenic |
| AGTCCGGTTTCTCTGCTTCA+AGG | 0.460352 | 8_4:-20036518 | Msa1318120:CDS |
| CCCTAGGTGAATTAAACCCT+TGG | 0.464043 | 8_4:+20036960 | None:intergenic |
| GTATTCATCGGGTCTGGGAG+GGG | 0.467947 | 8_4:-20036867 | Msa1318120:CDS |
| TGAAATTTCCTCAAAATCCT+CGG | 0.473995 | 8_4:+20036557 | None:intergenic |
| AAATATGCAGAACTGACTCT+TGG | 0.474237 | 8_4:-20033055 | Msa1318120:CDS |
| CGAATGTATTCATCGGGTCT+GGG | 0.479654 | 8_4:-20036872 | Msa1318120:CDS |
| GTTGAGGCAGTTTCATATGC+TGG | 0.479769 | 8_4:-20036716 | Msa1318120:CDS |
| AAAGTGTACTTGGACTTGAT+AGG | 0.481759 | 8_4:-20035967 | Msa1318120:CDS |
| GTTCAAATCATTAAGAATCA+TGG | 0.482628 | 8_4:-20032126 | Msa1318120:CDS |
| ATTGTTACAGTTGGCGGTGT+AGG | 0.488263 | 8_4:-20035848 | Msa1318120:CDS |
| TTTGCTGCCAGAGACGTACT+TGG | 0.490169 | 8_4:-20034936 | Msa1318120:CDS |
| ACTTTGTGGCTCATATAACT+TGG | 0.493805 | 8_4:+20031866 | None:intergenic |
| TTGTCGAGTCAAAGTGTACT+TGG | 0.494844 | 8_4:-20035977 | Msa1318120:CDS |
| CAAATATGGAATGCAAAGTC+CGG | 0.495989 | 8_4:-20036534 | Msa1318120:CDS |
| AGTTCCCGAATGTATTCATC+GGG | 0.500710 | 8_4:-20036878 | Msa1318120:CDS |
| GTGCAATCTATTGTTACAGT+TGG | 0.501112 | 8_4:-20035857 | Msa1318120:CDS |
| TCATCGGGTCTGGGAGGGGA+AGG | 0.505783 | 8_4:-20036863 | Msa1318120:CDS |
| ATGGTGGTCGTTCCGGTTGG+TGG | 0.509478 | 8_4:-20036617 | Msa1318120:CDS |
| GTGAAACAGAAGTGGGTGTT+GGG | 0.512236 | 8_4:-20036829 | Msa1318120:CDS |
| AAGGTAACCAAATATCGCAC+TGG | 0.515597 | 8_4:+20036437 | None:intergenic |
| CTGCAGGCTGGATCGATAGA+AGG | 0.517005 | 8_4:-20034358 | Msa1318120:intron |
| GACTGGTGTGAGTGATGTGA+AGG | 0.517005 | 8_4:-20036807 | Msa1318120:CDS |
| AATACCTTGCACCCACTTGG+AGG | 0.517555 | 8_4:-20036066 | Msa1318120:CDS |
| GAGTTCCCGAATGTATTCAT+CGG | 0.520182 | 8_4:-20036879 | Msa1318120:CDS |
| CAATCTATTGTTACAGTTGG+CGG | 0.523929 | 8_4:-20035854 | Msa1318120:CDS |
| TTTGGCTGAGGCTTGTGGTG+TGG | 0.528203 | 8_4:-20035882 | Msa1318120:CDS |
| TATCGTATCTCCAATTGAGA+AGG | 0.528797 | 8_4:+20034875 | None:intergenic |
| TGTATTCATCGGGTCTGGGA+GGG | 0.528892 | 8_4:-20036868 | Msa1318120:CDS |
| AACATGGTGGTCGTTCCGGT+TGG | 0.531909 | 8_4:-20036620 | Msa1318120:CDS |
| TTAAATCCTCAATTTGAAGA+GGG | 0.533390 | 8_4:+20033185 | None:intergenic |
| AAGTGTACTTGGACTTGATA+GGG | 0.534927 | 8_4:-20035966 | Msa1318120:CDS |
| GCAGTTAAAGTACCACCAAC+CGG | 0.537668 | 8_4:+20036605 | None:intergenic |
| ATACCTTGCACCCACTTGGA+GGG | 0.537762 | 8_4:-20036065 | Msa1318120:CDS |
| TCTCTTCATAGTTCAATCAA+GGG | 0.546374 | 8_4:-20037202 | Msa1318120:CDS |
| ACAGAAGTGGGTGTTGGGAC+TGG | 0.546763 | 8_4:-20036824 | Msa1318120:CDS |
| ATGGCTTTGGCTGAGGCTTG+TGG | 0.548571 | 8_4:-20035887 | Msa1318120:CDS |
| ATCGTATCTCCAATTGAGAA+GGG | 0.549105 | 8_4:+20034876 | None:intergenic |
| ATGACATTGTTTGGAATCAA+CGG | 0.550329 | 8_4:+20037297 | None:intergenic |
| CACCCCTCCAAGTGGGTGCA+AGG | 0.550981 | 8_4:+20036062 | None:intergenic |
| ATCGTCGAATTAGAAACAAA+AGG | 0.551686 | 8_4:+20036914 | None:intergenic |
| TATTGCGAAGCTATAGCTGT+TGG | 0.552357 | 8_4:+20036085 | None:intergenic |
| CATGCGTGACAAGAAACAGC+AGG | 0.554317 | 8_4:+20033084 | None:intergenic |
| AATGCTGCATTTGAAACCCA+AGG | 0.554701 | 8_4:-20036977 | Msa1318120:CDS |
| GTTACAGTTGGCGGTGTAGG+AGG | 0.557616 | 8_4:-20035845 | Msa1318120:intron |
| CAGACCCGATGAATACATTC+GGG | 0.564141 | 8_4:+20036874 | None:intergenic |
| GTACTTGGCAATGTGTTTAG+CGG | 0.569884 | 8_4:-20034921 | Msa1318120:CDS |
| AAGAATGGTGAAACAGAAGT+GGG | 0.570567 | 8_4:-20036836 | Msa1318120:CDS |
| TGCTTCAAGGAAACTTGTCA+GGG | 0.571013 | 8_4:-20036505 | Msa1318120:CDS |
| CCAAGGGTTTAATTCACCTA+GGG | 0.571704 | 8_4:-20036960 | Msa1318120:CDS |
| TACCTTGCACCCACTTGGAG+GGG | 0.573754 | 8_4:-20036064 | Msa1318120:CDS |
| AAGGTTAAGGAAGGTTCTGA+TGG | 0.574954 | 8_4:-20036689 | Msa1318120:CDS |
| ACTGGTGTGAGTGATGTGAA+GGG | 0.576942 | 8_4:-20036806 | Msa1318120:CDS |
| GGTGAAACAGAAGTGGGTGT+TGG | 0.578120 | 8_4:-20036830 | Msa1318120:CDS |
| TAACTGCTACTCTAGTAGGT+TGG | 0.579158 | 8_4:-20036589 | Msa1318120:CDS |
| ATGAGTTCGGCACAATGACT+GGG | 0.582174 | 8_4:+20034281 | None:intergenic |
| TTCACATCCTTATCTTAACA+TGG | 0.583287 | 8_4:-20036636 | Msa1318120:CDS |
| TAAGAATGGTGAAACAGAAG+TGG | 0.583533 | 8_4:-20036837 | Msa1318120:CDS |
| ACGACCACCATGTTAAGATA+AGG | 0.587531 | 8_4:+20036629 | None:intergenic |
| ATGCTGCATTTGAAACCCAA+GGG | 0.595801 | 8_4:-20036976 | Msa1318120:CDS |
| AGTGGTGTACCATGTTCTTG+AGG | 0.596617 | 8_4:+20033026 | None:intergenic |
| TTGATAGGATGAAAGATACA+TGG | 0.604293 | 8_4:-20036748 | Msa1318120:CDS |
| TTAATATCATTCGATATATG+GGG | 0.608231 | 8_4:+20033154 | None:intergenic |
| ATGTATTCATCGGGTCTGGG+AGG | 0.608880 | 8_4:-20036869 | Msa1318120:CDS |
| GGAGGGGAAGGAATTAAGAA+TGG | 0.615992 | 8_4:-20036851 | Msa1318120:CDS |
| GCTGGTGATAAGGTTAAGGA+AGG | 0.616487 | 8_4:-20036698 | Msa1318120:CDS |
| TACATGGAAGAGTGTTGTTG+AGG | 0.617826 | 8_4:-20036732 | Msa1318120:CDS |
| CCCAAGGGTTTAATTCACCT+AGG | 0.618679 | 8_4:-20036961 | Msa1318120:CDS |
| TAGGTTGGTTCATCTTGCCG+AGG | 0.629438 | 8_4:-20036574 | Msa1318120:CDS |
| TGGATACAACCTCAAGAACA+TGG | 0.631811 | 8_4:-20033035 | Msa1318120:intron |
| ATCACTGCACCCCTCCAAGT+GGG | 0.633969 | 8_4:+20036055 | None:intergenic |
| ACAACACTGAAACATACCCT+AGG | 0.634808 | 8_4:+20036944 | None:intergenic |
| GGTTCTTTATCAGGTCATAG+GGG | 0.634891 | 8_4:-20037010 | Msa1318120:CDS |
| GAAGGGCTTAGAAAACTGCA+TGG | 0.635418 | 8_4:+20034893 | None:intergenic |
| AGGTAACCAAATATCGCACT+GGG | 0.640694 | 8_4:+20036438 | None:intergenic |
| ATCGATAGAAGGTCAAGTGG+TGG | 0.642083 | 8_4:-20034347 | Msa1318120:CDS |
| AATGGCACGATAATCGGCAC+GGG | 0.646394 | 8_4:+20033219 | None:intergenic |
| GAATGGCACGATAATCGGCA+CGG | 0.661082 | 8_4:+20033218 | None:intergenic |
| TGGATCGATAGAAGGTCAAG+TGG | 0.662346 | 8_4:-20034350 | Msa1318120:CDS |
| AATCACTGCACCCCTCCAAG+TGG | 0.673475 | 8_4:+20036054 | None:intergenic |
| GCTTCAAGGAAACTTGTCAG+GGG | 0.689372 | 8_4:-20036504 | Msa1318120:CDS |
| GTGTTGCTCTTGGAAGCACA+TGG | 0.692094 | 8_4:-20032104 | Msa1318120:CDS |
| TAAGTAACATACTCAACACA+AGG | 0.692833 | 8_4:-20032073 | Msa1318120:exon |
| ACATCCTTATCTTAACATGG+TGG | 0.693432 | 8_4:-20036633 | Msa1318120:CDS |
| ATGCGTGACAAGAAACAGCA+GGG | 0.693975 | 8_4:+20033085 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAGATTAATTAAATTTGA+AGG | + | chr8_4:20032048-20032067 | None:intergenic | 10.0% |
| !! | ATTATAAAAAAATTATGTTG+CGG | - | chr8_4:20033206-20033225 | Msa1318120:CDS | 10.0% |
| !!! | ATTTTTATGCTTATAAAATA+AGG | - | chr8_4:20034402-20034421 | Msa1318120:intron | 10.0% |
| !!! | TTTTTATGCTTATAAAATAA+GGG | - | chr8_4:20034403-20034422 | Msa1318120:intron | 10.0% |
| !! | TAATGAAGTAAAATAAAATT+TGG | - | chr8_4:20034877-20034896 | Msa1318120:CDS | 10.0% |
| !! | AACAAAAAAAAAAAAAAAAG+GGG | + | chr8_4:20035193-20035212 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTGTTTTTTG+AGG | - | chr8_4:20035198-20035217 | Msa1318120:intron | 10.0% |
| !!! | TTTTTTTTTTTGTTTTTTGA+GGG | - | chr8_4:20035199-20035218 | Msa1318120:intron | 10.0% |
| !!! | GTATTTTAAATTCATTTATT+TGG | - | chr8_4:20035942-20035961 | Msa1318120:CDS | 10.0% |
| !!! | ATTTTAAATTCATTTATTTG+GGG | - | chr8_4:20035944-20035963 | Msa1318120:CDS | 10.0% |
| !! | AAGAAAACAAATATTGAAAA+AGG | - | chr8_4:20031894-20031913 | Msa1318120:three_prime_UTR | 15.0% |
| !!! | TTTACATTCTTAAAACTTTT+TGG | - | chr8_4:20033630-20033649 | Msa1318120:intron | 15.0% |
| !!! | TTTGATGCTTTTTTTTTTTT+GGG | + | chr8_4:20034001-20034020 | None:intergenic | 15.0% |
| !!! | ATTTGATGCTTTTTTTTTTT+TGG | + | chr8_4:20034002-20034021 | None:intergenic | 15.0% |
| !! | ATCAGTTATAAGAAAAATAA+AGG | - | chr8_4:20034237-20034256 | Msa1318120:intron | 15.0% |
| !!! | TTTTATTTCTATCTTTATAC+AGG | - | chr8_4:20034445-20034464 | Msa1318120:intron | 15.0% |
| !! | ACAAAAAAAAAAAAAAAAGG+GGG | + | chr8_4:20035192-20035211 | None:intergenic | 15.0% |
| !! | TAGATAAAATGAATACATTA+TGG | - | chr8_4:20035674-20035693 | Msa1318120:intron | 15.0% |
| !! | AAAAGATTATTGAGATTATA+AGG | + | chr8_4:20036066-20036085 | None:intergenic | 15.0% |
| !! | TTTAATATCATTCGATATAT+GGG | + | chr8_4:20036267-20036286 | None:intergenic | 15.0% |
| !!! | ATTTGTTTTAAAAATGCTTT+GGG | - | chr8_4:20036479-20036498 | Msa1318120:CDS | 15.0% |
| !!! | GTTATTTTTTTCTATTGAAA+AGG | - | chr8_4:20036676-20036695 | Msa1318120:CDS | 15.0% |
| !! | AACCATTTAAAAAAAATTAG+AGG | - | chr8_4:20037130-20037149 | Msa1318120:CDS | 15.0% |
| !!! | TACCTCTAATTTTTTTTAAA+TGG | + | chr8_4:20037135-20037154 | None:intergenic | 15.0% |
| !!! | GTTTTAAAATGTAAAAAATC+TGG | - | chr8_4:20037409-20037428 | Msa1318120:intron | 15.0% |
| !!! | AGTGATAATTTTGAACATTT+TGG | + | chr8_4:20032259-20032278 | None:intergenic | 20.0% |
| !! | ATACAAAAAGAGATAAAAAC+AGG | + | chr8_4:20033062-20033081 | None:intergenic | 20.0% |
| !!! | TCTTTTTGTATTATGTGTTT+AGG | - | chr8_4:20033071-20033090 | Msa1318120:CDS | 20.0% |
| !!! | CTTTTTGTATTATGTGTTTA+GGG | - | chr8_4:20033072-20033091 | Msa1318120:CDS | 20.0% |
| !! | TTCTTATAAGTATATCAATC+TGG | - | chr8_4:20033743-20033762 | Msa1318120:intron | 20.0% |
| !! | CATAAAAATAAATAAGCAAC+AGG | + | chr8_4:20034391-20034410 | None:intergenic | 20.0% |
| !! | ATTTCTTGTAAAAAGTAAAC+CGG | + | chr8_4:20034608-20034627 | None:intergenic | 20.0% |
| !!! | AAATATGATTTTTTGAACCA+TGG | - | chr8_4:20034624-20034643 | Msa1318120:intron | 20.0% |
| !!! | ATGTTGCAATTATGTTTTTT+AGG | - | chr8_4:20034688-20034707 | Msa1318120:intron | 20.0% |
| !!! | TGTTGCAATTATGTTTTTTA+GGG | - | chr8_4:20034689-20034708 | Msa1318120:intron | 20.0% |
| !! | CAATTATTTGTTTACATCTA+GGG | - | chr8_4:20034720-20034739 | Msa1318120:intron | 20.0% |
| !! | AATTATTTGTTTACATCTAG+GGG | - | chr8_4:20034721-20034740 | Msa1318120:intron | 20.0% |
| !!! | ATTTAACGTTGTTCTAATTT+TGG | + | chr8_4:20034846-20034865 | None:intergenic | 20.0% |
| !! | AATTAGAACAACGTTAAATA+AGG | - | chr8_4:20034847-20034866 | Msa1318120:intron | 20.0% |
| !! | ATTAGAACAACGTTAAATAA+GGG | - | chr8_4:20034848-20034867 | Msa1318120:intron | 20.0% |
| !! | TGAAGTAAAATAAAATTTGG+AGG | - | chr8_4:20034880-20034899 | Msa1318120:CDS | 20.0% |
| !! | CAAAAAAAAAAAAAAAAGGG+GGG | + | chr8_4:20035191-20035210 | None:intergenic | 20.0% |
| !! | TTATGATTTAAAAAACACCA+AGG | + | chr8_4:20035638-20035657 | None:intergenic | 20.0% |
| !! | ATAAGAAGTAACAAACATAT+TGG | + | chr8_4:20035733-20035752 | None:intergenic | 20.0% |
| !! | TTAATATCATTCGATATATG+GGG | + | chr8_4:20036266-20036285 | None:intergenic | 20.0% |
| !! | CTTTAATATCATTCGATATA+TGG | + | chr8_4:20036268-20036287 | None:intergenic | 20.0% |
| !! | CATATATCGAATGATATTAA+AGG | - | chr8_4:20036266-20036285 | Msa1318120:intron | 20.0% |
| !!! | CATTTGTTTTAAAAATGCTT+TGG | - | chr8_4:20036478-20036497 | Msa1318120:CDS | 20.0% |
| !! | AATAGAAAAAAATAACAAGC+AGG | + | chr8_4:20036672-20036691 | None:intergenic | 20.0% |
| !! | TCTATCATGTTAAAAATCTA+GGG | + | chr8_4:20037060-20037079 | None:intergenic | 20.0% |
| !! | TTCTATCATGTTAAAAATCT+AGG | + | chr8_4:20037061-20037080 | None:intergenic | 20.0% |
| !! | TCTTTTCTTCATACATACTT+AGG | - | chr8_4:20031972-20031991 | Msa1318120:three_prime_UTR | 25.0% |
| !! | CTTTTCTTCATACATACTTA+GGG | - | chr8_4:20031973-20031992 | Msa1318120:three_prime_UTR | 25.0% |
| ! | AGAATTAAAAAGCTTGGAAT+AGG | + | chr8_4:20032021-20032040 | None:intergenic | 25.0% |
| ! | GGTTTAAGAATTAAAAAGCT+TGG | + | chr8_4:20032027-20032046 | None:intergenic | 25.0% |
| ! | AATACAGTAATGACATTGTT+TGG | + | chr8_4:20032132-20032151 | None:intergenic | 25.0% |
| !! | ACTATGAAGAGATTTTACAT+GGG | + | chr8_4:20032207-20032226 | None:intergenic | 25.0% |
| !! | AACTATGAAGAGATTTTACA+TGG | + | chr8_4:20032208-20032227 | None:intergenic | 25.0% |
| !! | AACATTTTGGACATTGAAAT+TGG | + | chr8_4:20032246-20032265 | None:intergenic | 25.0% |
| ! | TTGAGGAAATTTCACAAATA+TGG | - | chr8_4:20032869-20032888 | Msa1318120:intron | 25.0% |
| !! | TTCCTTATGAAAAAAGCTTT+TGG | - | chr8_4:20032942-20032961 | Msa1318120:intron | 25.0% |
| !! | TCCTTATGAAAAAAGCTTTT+GGG | - | chr8_4:20032943-20032962 | Msa1318120:intron | 25.0% |
| ! | TTAAATAAAGGTCTGGATAT+GGG | + | chr8_4:20033232-20033251 | None:intergenic | 25.0% |
| ! | TTTAAATAAAGGTCTGGATA+TGG | + | chr8_4:20033233-20033252 | None:intergenic | 25.0% |
| !!! | ATACACACGGTTTTAAATAA+AGG | + | chr8_4:20033244-20033263 | None:intergenic | 25.0% |
| ! | TAGTCAAAAAATGATACACA+CGG | + | chr8_4:20033257-20033276 | None:intergenic | 25.0% |
| ! | TCTATTTGTGATTGGTATAA+TGG | - | chr8_4:20033511-20033530 | Msa1318120:intron | 25.0% |
| !! | TTTTCCTTTTACTAGACTTT+TGG | - | chr8_4:20033655-20033674 | Msa1318120:intron | 25.0% |
| ! | AAAACCAAAAGTCTAGTAAA+AGG | + | chr8_4:20033662-20033681 | None:intergenic | 25.0% |
| ! | TCACCTTAAAATGAATAAGT+GGG | + | chr8_4:20033952-20033971 | None:intergenic | 25.0% |
| ! | TTCACCTTAAAATGAATAAG+TGG | + | chr8_4:20033953-20033972 | None:intergenic | 25.0% |
| !!! | AAGATTGTTTTGTAATCCTT+TGG | - | chr8_4:20034032-20034051 | Msa1318120:intron | 25.0% |
| ! | TATTTAGTGTTTCCTATTGT+AGG | - | chr8_4:20034075-20034094 | Msa1318120:intron | 25.0% |
| ! | ATCTTAAAATGTCTTGAGTT+GGG | - | chr8_4:20034128-20034147 | Msa1318120:intron | 25.0% |
| ! | GGACTAAATATTGTATAACT+TGG | - | chr8_4:20034149-20034168 | Msa1318120:intron | 25.0% |
| ! | TATGCTTATAAAATAAGGGA+TGG | - | chr8_4:20034407-20034426 | Msa1318120:intron | 25.0% |
| !!! | TTATGTTTTTTAGGGAAGAA+TGG | - | chr8_4:20034697-20034716 | Msa1318120:intron | 25.0% |
| ! | GCAATTATTTGTTTACATCT+AGG | - | chr8_4:20034719-20034738 | Msa1318120:intron | 25.0% |
| ! | TCTATGAAATTCGAAAATTC+TGG | - | chr8_4:20034966-20034985 | Msa1318120:intron | 25.0% |
| !!! | TTCGAAAATTCTGGAATATT+TGG | - | chr8_4:20034975-20034994 | Msa1318120:intron | 25.0% |
| ! | AACGAAAATCATGATTGATT+TGG | + | chr8_4:20035392-20035411 | None:intergenic | 25.0% |
| !! | AAATCAATCATGATTTTCGT+TGG | - | chr8_4:20035391-20035410 | Msa1318120:intron | 25.0% |
| !! | GTTTGTTACTTCTTATTTAG+TGG | - | chr8_4:20035737-20035756 | Msa1318120:intron | 25.0% |
| ! | CTTATTTAGTGGAATAACAA+TGG | - | chr8_4:20035748-20035767 | Msa1318120:intron | 25.0% |
| ! | GAAATTTGAATATATCTGTG+AGG | - | chr8_4:20035970-20035989 | Msa1318120:CDS | 25.0% |
| ! | TTCAAAATTTACATATCCTC+TGG | + | chr8_4:20036004-20036023 | None:intergenic | 25.0% |
| ! | TTAAATCCTCAATTTGAAGA+GGG | + | chr8_4:20036235-20036254 | None:intergenic | 25.0% |
| !! | TCAAATGCAAAAGTTTTCTT+AGG | - | chr8_4:20036299-20036318 | Msa1318120:intron | 25.0% |
| ! | AGCATTAGATAGTAAGTTAT+TGG | - | chr8_4:20036967-20036986 | Msa1318120:CDS | 25.0% |
| ! | GCATTAGATAGTAAGTTATT+GGG | - | chr8_4:20036968-20036987 | Msa1318120:CDS | 25.0% |
| ! | GAAAATAGTCCAATAATTAG+AGG | - | chr8_4:20037078-20037097 | Msa1318120:CDS | 25.0% |
| !! | AGAGGTAAATAGTCTATTTT+AGG | - | chr8_4:20037148-20037167 | Msa1318120:CDS | 25.0% |
| ! | AAAAGATGTACAACCAAATA+TGG | + | chr8_4:20037185-20037204 | None:intergenic | 25.0% |
| ! | GTTCAAATCATTAAGAATCA+TGG | - | chr8_4:20037291-20037310 | Msa1318120:five_prime_UTR | 25.0% |
| ! | ATGACATTGTTTGGAATCAA+CGG | + | chr8_4:20032123-20032142 | None:intergenic | 30.0% |
| GTTTAACAATGTCTGCTATT+AGG | - | chr8_4:20032177-20032196 | Msa1318120:CDS | 30.0% | |
| ATCTCTTCATAGTTCAATCA+AGG | - | chr8_4:20032214-20032233 | Msa1318120:intron | 30.0% | |
| TCTCTTCATAGTTCAATCAA+GGG | - | chr8_4:20032215-20032234 | Msa1318120:intron | 30.0% | |
| AATTATCACTCTAACCCTAA+TGG | - | chr8_4:20032269-20032288 | Msa1318120:intron | 30.0% | |
| ATTATCACTCTAACCCTAAT+GGG | - | chr8_4:20032270-20032289 | Msa1318120:intron | 30.0% | |
| !!! | ACCCATTTTTTGAATAACGA+CGG | + | chr8_4:20032343-20032362 | None:intergenic | 30.0% |
| TCAGACTCAGTTTAGAAATT+TGG | - | chr8_4:20032385-20032404 | Msa1318120:intron | 30.0% | |
| CAGACTCAGTTTAGAAATTT+GGG | - | chr8_4:20032386-20032405 | Msa1318120:intron | 30.0% | |
| ! | AGAAATTTGGGTTCTTTATC+AGG | - | chr8_4:20032398-20032417 | Msa1318120:intron | 30.0% |
| ATCGTCGAATTAGAAACAAA+AGG | + | chr8_4:20032506-20032525 | None:intergenic | 30.0% | |
| TTGATAGGATGAAAGATACA+TGG | - | chr8_4:20032669-20032688 | Msa1318120:intron | 30.0% | |
| TTCACATCCTTATCTTAACA+TGG | - | chr8_4:20032781-20032800 | Msa1318120:intron | 30.0% | |
| TGAAATTTCCTCAAAATCCT+CGG | + | chr8_4:20032863-20032882 | None:intergenic | 30.0% | |
| !!! | AAGCTTTTTTCATAAGGAAC+TGG | + | chr8_4:20032941-20032960 | None:intergenic | 30.0% |
| ! | CCTTATGAAAAAAGCTTTTG+GGG | - | chr8_4:20032944-20032963 | Msa1318120:intron | 30.0% |
| TTAAATAGTTGTCGAGGTAA+CGG | - | chr8_4:20033097-20033116 | Msa1318120:CDS | 30.0% | |
| CGTCAGAATCTTTGATATTA+TGG | - | chr8_4:20033129-20033148 | Msa1318120:CDS | 30.0% | |
| TATTTAATGCAGTGCTGTAA+TGG | - | chr8_4:20033304-20033323 | Msa1318120:intron | 30.0% | |
| ! | CAGTGATTCTTTCTTTTGTA+TGG | - | chr8_4:20033378-20033397 | Msa1318120:intron | 30.0% |
| ! | TTGTATGGTTTTTGCATAGA+TGG | - | chr8_4:20033393-20033412 | Msa1318120:intron | 30.0% |
| !! | GGAAAACAAATGTTTTTGCA+CGG | - | chr8_4:20033414-20033433 | Msa1318120:intron | 30.0% |
| ! | TCTATTGGTCTATTTGTGAT+TGG | - | chr8_4:20033503-20033522 | Msa1318120:intron | 30.0% |
| !! | TTGGTTTTCTACAATGTTGA+TGG | - | chr8_4:20033674-20033693 | Msa1318120:intron | 30.0% |
| GCTCTTTAATATAAGCAAAC+TGG | + | chr8_4:20033821-20033840 | None:intergenic | 30.0% | |
| GATGCTTAATATAAGCAAAC+TGG | + | chr8_4:20033848-20033867 | None:intergenic | 30.0% | |
| ATAATGCACAATATGTGCAA+GGG | - | chr8_4:20033905-20033924 | Msa1318120:intron | 30.0% | |
| CACCTTAAAATGAATAAGTG+GGG | + | chr8_4:20033951-20033970 | None:intergenic | 30.0% | |
| GATCTTAAAATGTCTTGAGT+TGG | - | chr8_4:20034127-20034146 | Msa1318120:intron | 30.0% | |
| ! | GTATTTTCATGTGTTCCAAT+TGG | - | chr8_4:20034271-20034290 | Msa1318120:CDS | 30.0% |
| ! | TAAGGGATGGAAAATTTTCA+TGG | - | chr8_4:20034420-20034439 | Msa1318120:intron | 30.0% |
| GCATAGATGTGTAAAACAAA+TGG | + | chr8_4:20034655-20034674 | None:intergenic | 30.0% | |
| TTGCAACATAACTGCAAATA+AGG | + | chr8_4:20034677-20034696 | None:intergenic | 30.0% | |
| AGATATTGCATGTACATTCA+AGG | - | chr8_4:20034791-20034810 | Msa1318120:intron | 30.0% | |
| GATATTGCATGTACATTCAA+GGG | - | chr8_4:20034792-20034811 | Msa1318120:intron | 30.0% | |
| AATCAGGGTTAAAACATTTG+AGG | - | chr8_4:20034818-20034837 | Msa1318120:intron | 30.0% | |
| ATCAGGGTTAAAACATTTGA+GGG | - | chr8_4:20034819-20034838 | Msa1318120:intron | 30.0% | |
| TCTCGTAGTAATACATTTGT+TGG | + | chr8_4:20034909-20034928 | None:intergenic | 30.0% | |
| TGGCTAGAAAAAAATGAGTT+CGG | + | chr8_4:20035152-20035171 | None:intergenic | 30.0% | |
| AAAAAAAAAAAGGGGGGAAA+AGG | + | chr8_4:20035185-20035204 | None:intergenic | 30.0% | |
| ACTGACTACTTCTAAATTGT+GGG | + | chr8_4:20035279-20035298 | None:intergenic | 30.0% | |
| AAGAAGCAAAGCAATAAAGT+AGG | + | chr8_4:20035302-20035321 | None:intergenic | 30.0% | |
| AACAGAATAATAACTCAGTG+AGG | + | chr8_4:20035509-20035528 | None:intergenic | 30.0% | |
| ! | TTTCATCAGTTTTCAAACTG+AGG | - | chr8_4:20035888-20035907 | Msa1318120:CDS | 30.0% |
| TCAAGTAAGCCAATCAAATA+AGG | + | chr8_4:20035914-20035933 | None:intergenic | 30.0% | |
| CTTAAATCCTCAATTTGAAG+AGG | + | chr8_4:20036236-20036255 | None:intergenic | 30.0% | |
| CATCCTTTATTGCATTTGTT+TGG | - | chr8_4:20036642-20036661 | Msa1318120:CDS | 30.0% | |
| AAGCCAAACAAATGCAATAA+AGG | + | chr8_4:20036648-20036667 | None:intergenic | 30.0% | |
| ATATCTCACTGTCTCTTAAT+TGG | - | chr8_4:20036711-20036730 | Msa1318120:CDS | 30.0% | |
| AACTAGGGTTTCAATAACAT+AGG | + | chr8_4:20037015-20037034 | None:intergenic | 30.0% | |
| GAAAAGAACAATGACAACTA+GGG | + | chr8_4:20037030-20037049 | None:intergenic | 30.0% | |
| ! | GTTAAAAATCTAGGGTTTCA+GGG | + | chr8_4:20037052-20037071 | None:intergenic | 30.0% |
| ! | TGTTAAAAATCTAGGGTTTC+AGG | + | chr8_4:20037053-20037072 | None:intergenic | 30.0% |
| GGTTTAGTCTATTATTTCCA+TGG | + | chr8_4:20037114-20037133 | None:intergenic | 30.0% | |
| CAACCAAATATGGTGAAATT+AGG | + | chr8_4:20037175-20037194 | None:intergenic | 30.0% | |
| TAAGTAACATACTCAACACA+AGG | - | chr8_4:20037344-20037363 | Msa1318120:intron | 30.0% | |
| ! | TCAACACAAGGACAATTTTT+AGG | - | chr8_4:20037356-20037375 | Msa1318120:intron | 30.0% |
| CAAGATTCAATGACCCATTA+GGG | + | chr8_4:20032286-20032305 | None:intergenic | 35.0% | |
| AGCCGTCGTTATTCAAAAAA+TGG | - | chr8_4:20032338-20032357 | Msa1318120:intron | 35.0% | |
| GCCGTCGTTATTCAAAAAAT+GGG | - | chr8_4:20032339-20032358 | Msa1318120:intron | 35.0% | |
| TCTAATTCGACGATGACTAA+TGG | - | chr8_4:20032512-20032531 | Msa1318120:intron | 35.0% | |
| CTAATTCGACGATGACTAAT+GGG | - | chr8_4:20032513-20032532 | Msa1318120:intron | 35.0% | |
| TAAGAATGGTGAAACAGAAG+TGG | - | chr8_4:20032580-20032599 | Msa1318120:intron | 35.0% | |
| AAGAATGGTGAAACAGAAGT+GGG | - | chr8_4:20032581-20032600 | Msa1318120:intron | 35.0% | |
| AGTTTCATATGCTGGTGATA+AGG | - | chr8_4:20032709-20032728 | Msa1318120:intron | 35.0% | |
| ATATGCTGGTGATAAGGTTA+AGG | - | chr8_4:20032715-20032734 | Msa1318120:intron | 35.0% | |
| TCAAGAAACTGTTGAGCATA+TGG | + | chr8_4:20032761-20032780 | None:intergenic | 35.0% | |
| ACATCCTTATCTTAACATGG+TGG | - | chr8_4:20032784-20032803 | Msa1318120:intron | 35.0% | |
| ACTTTAACTGCTACTCTAGT+AGG | - | chr8_4:20032824-20032843 | Msa1318120:intron | 35.0% | |
| CAAATATGGAATGCAAAGTC+CGG | - | chr8_4:20032883-20032902 | Msa1318120:intron | 35.0% | |
| !!! | CCCCAAAAGCTTTTTTCATA+AGG | + | chr8_4:20032947-20032966 | None:intergenic | 35.0% |
| ! | GCGATATTTGGTTACCTTTT+TGG | - | chr8_4:20032985-20033004 | Msa1318120:intron | 35.0% |
| CATTTGTGAGAATGCCAAAA+AGG | + | chr8_4:20033002-20033021 | None:intergenic | 35.0% | |
| !!! | AGGGTTTTAAATAGTTGTCG+AGG | - | chr8_4:20033091-20033110 | Msa1318120:CDS | 35.0% |
| TAAATAGTTGTCGAGGTAAC+GGG | - | chr8_4:20033098-20033117 | Msa1318120:CDS | 35.0% | |
| !!! | CACGGTTTTAAATAAAGGTC+TGG | + | chr8_4:20033239-20033258 | None:intergenic | 35.0% |
| AAAGTGTACTTGGACTTGAT+AGG | - | chr8_4:20033450-20033469 | Msa1318120:intron | 35.0% | |
| AAGTGTACTTGGACTTGATA+GGG | - | chr8_4:20033451-20033470 | Msa1318120:intron | 35.0% | |
| CTAGACAAAATCTCGTCTAT+TGG | - | chr8_4:20033488-20033507 | Msa1318120:intron | 35.0% | |
| TGTGATTGGTATAATGGCTT+TGG | - | chr8_4:20033517-20033536 | Msa1318120:intron | 35.0% | |
| GTGCAATCTATTGTTACAGT+TGG | - | chr8_4:20033560-20033579 | Msa1318120:intron | 35.0% | |
| CAATCTATTGTTACAGTTGG+CGG | - | chr8_4:20033563-20033582 | Msa1318120:intron | 35.0% | |
| !! | GTTTTCTACAATGTTGATGG+AGG | - | chr8_4:20033677-20033696 | Msa1318120:intron | 35.0% |
| GATAATGCACAATATGTGCA+AGG | - | chr8_4:20033904-20033923 | Msa1318120:intron | 35.0% | |
| ! | CACCCCACTTATTCATTTTA+AGG | - | chr8_4:20033946-20033965 | Msa1318120:intron | 35.0% |
| TCAAAGATAGAATGCACCAA+AGG | + | chr8_4:20034051-20034070 | None:intergenic | 35.0% | |
| TTCTCATTCGATCCTACAAT+AGG | + | chr8_4:20034090-20034109 | None:intergenic | 35.0% | |
| ATCTGTCTCTTCAAAGATTG+AGG | + | chr8_4:20034191-20034210 | None:intergenic | 35.0% | |
| ! | TTTTCTAAGCCCTTCTCAAT+TGG | - | chr8_4:20034532-20034551 | Msa1318120:intron | 35.0% |
| ATCGTATCTCCAATTGAGAA+GGG | + | chr8_4:20034544-20034563 | None:intergenic | 35.0% | |
| TATCGTATCTCCAATTGAGA+AGG | + | chr8_4:20034545-20034564 | None:intergenic | 35.0% | |
| TGCAAATTAGTGATCGTTAC+CGG | - | chr8_4:20034586-20034605 | Msa1318120:intron | 35.0% | |
| TAAAACAAATGGCGAATCCA+TGG | + | chr8_4:20034644-20034663 | None:intergenic | 35.0% | |
| TACATTCAAGGGTAGAATCA+GGG | - | chr8_4:20034803-20034822 | Msa1318120:intron | 35.0% | |
| TCAGGGTTAAAACATTTGAG+GGG | - | chr8_4:20034820-20034839 | Msa1318120:intron | 35.0% | |
| !!! | GAACTCATTTTTTTCTAGCC+AGG | - | chr8_4:20035151-20035170 | Msa1318120:intron | 35.0% |
| !!! | TCATTTTTTTCTAGCCAGGT+AGG | - | chr8_4:20035155-20035174 | Msa1318120:intron | 35.0% |
| !!! | TTTTTTGAGGGATTCTGTAC+AGG | - | chr8_4:20035211-20035230 | Msa1318120:intron | 35.0% |
| GACTGACTACTTCTAAATTG+TGG | + | chr8_4:20035280-20035299 | None:intergenic | 35.0% | |
| TTGAGTGTTCAGAACAGATA+TGG | + | chr8_4:20035364-20035383 | None:intergenic | 35.0% | |
| TTCCAAGAAATAGTTTGAGC+AGG | - | chr8_4:20035537-20035556 | Msa1318120:intron | 35.0% | |
| GTTCTATCTTACTAGATTGC+AGG | - | chr8_4:20035601-20035620 | Msa1318120:intron | 35.0% | |
| TAAAAAACACCAAGGAGAAC+AGG | + | chr8_4:20035630-20035649 | None:intergenic | 35.0% | |
| !!! | TGTTTTTTTTCCCAGTCGAA+TGG | + | chr8_4:20035797-20035816 | None:intergenic | 35.0% |
| TACTATGTTATGCTCCTTCA+TGG | - | chr8_4:20035823-20035842 | Msa1318120:intron | 35.0% | |
| GAATCAAAATCAGACCATGA+AGG | + | chr8_4:20035840-20035859 | None:intergenic | 35.0% | |
| !! | AAACTGAGGCCTTATTTGAT+TGG | - | chr8_4:20035902-20035921 | Msa1318120:CDS | 35.0% |
| TAAGGCAACAACTTATGCAT+CGG | + | chr8_4:20036048-20036067 | None:intergenic | 35.0% | |
| TAAGATCAACAGCATAAGCA+AGG | + | chr8_4:20036089-20036108 | None:intergenic | 35.0% | |
| CAAAGTTAGCATGGAAAAGA+GGG | + | chr8_4:20036159-20036178 | None:intergenic | 35.0% | |
| ACAAAGTTAGCATGGAAAAG+AGG | + | chr8_4:20036160-20036179 | None:intergenic | 35.0% | |
| ! | CTTTTCCATGCTAACTTTGT+AGG | - | chr8_4:20036160-20036179 | Msa1318120:intron | 35.0% |
| AATTGCCTACAAAGTTAGCA+TGG | + | chr8_4:20036168-20036187 | None:intergenic | 35.0% | |
| !! | AAGAGGGATTTTGGTAAGAA+TGG | + | chr8_4:20036219-20036238 | None:intergenic | 35.0% |
| ! | CTCAATTTGAAGAGGGATTT+TGG | + | chr8_4:20036228-20036247 | None:intergenic | 35.0% |
| CAAAATCCCTCTTCAAATTG+AGG | - | chr8_4:20036226-20036245 | Msa1318120:intron | 35.0% | |
| ! | AAATATGCAGAACTGACTCT+TGG | - | chr8_4:20036362-20036381 | Msa1318120:intron | 35.0% |
| TTAATTCAGACTCAGATGAG+TGG | + | chr8_4:20036412-20036431 | None:intergenic | 35.0% | |
| AGTGTGAAGCAAGCATAATA+TGG | + | chr8_4:20036442-20036461 | None:intergenic | 35.0% | |
| ! | AAAGCATCACGTAGAAGTAA+TGG | - | chr8_4:20036773-20036792 | Msa1318120:CDS | 35.0% |
| ! | AAGAAGGTATAGAAGCATAG+CGG | - | chr8_4:20036811-20036830 | Msa1318120:CDS | 35.0% |
| ! | TGGGCCTTTTAGATTTCTAT+TGG | - | chr8_4:20036987-20037006 | Msa1318120:CDS | 35.0% |
| ! | GGGCCTTTTAGATTTCTATT+GGG | - | chr8_4:20036988-20037007 | Msa1318120:CDS | 35.0% |
| GGTCCCAATAGAAATCTAAA+AGG | + | chr8_4:20036994-20037013 | None:intergenic | 35.0% | |
| GGAAAAGAACAATGACAACT+AGG | + | chr8_4:20037031-20037050 | None:intergenic | 35.0% | |
| AGTCCAATAATTAGAGGTTG+AGG | - | chr8_4:20037084-20037103 | Msa1318120:CDS | 35.0% | |
| GTCCAATAATTAGAGGTTGA+GGG | - | chr8_4:20037085-20037104 | Msa1318120:CDS | 35.0% | |
| GGACCTAATTTCACCATATT+TGG | - | chr8_4:20037169-20037188 | Msa1318120:CDS | 35.0% | |
| TAATGATTTGAACTGCTTGC+AGG | + | chr8_4:20037284-20037303 | None:intergenic | 35.0% | |
| CTGACGTTAGAAAATTGCTT+TGG | + | chr8_4:20037447-20037466 | None:intergenic | 35.0% | |
| ! | AGCAATTTTCTAACGTCAGT+TGG | - | chr8_4:20037448-20037467 | Msa1318120:intron | 35.0% |
| CTGTGTAGTCAGATATCATT+TGG | - | chr8_4:20037473-20037492 | Msa1318120:intron | 35.0% | |
| !! | ATTCGTCGTTTTCGTCTTCA+CGG | - | chr8_4:20031942-20031961 | Msa1318120:three_prime_UTR | 40.0% |
| GCAAGATTCAATGACCCATT+AGG | + | chr8_4:20032287-20032306 | None:intergenic | 40.0% | |
| TGAGTCTGAGCAAACATCTT+AGG | + | chr8_4:20032374-20032393 | None:intergenic | 40.0% | |
| TGGGTTCTTTATCAGGTCAT+AGG | - | chr8_4:20032405-20032424 | Msa1318120:intron | 40.0% | |
| GGGTTCTTTATCAGGTCATA+GGG | - | chr8_4:20032406-20032425 | Msa1318120:intron | 40.0% | |
| GGTTCTTTATCAGGTCATAG+GGG | - | chr8_4:20032407-20032426 | Msa1318120:intron | 40.0% | |
| ! | AATGCTGCATTTGAAACCCA+AGG | - | chr8_4:20032440-20032459 | Msa1318120:intron | 40.0% |
| ! | ATGCTGCATTTGAAACCCAA+GGG | - | chr8_4:20032441-20032460 | Msa1318120:intron | 40.0% |
| CCTAGGTGAATTAAACCCTT+GGG | + | chr8_4:20032459-20032478 | None:intergenic | 40.0% | |
| CCAAGGGTTTAATTCACCTA+GGG | - | chr8_4:20032457-20032476 | Msa1318120:intron | 40.0% | |
| ACAACACTGAAACATACCCT+AGG | + | chr8_4:20032476-20032495 | None:intergenic | 40.0% | |
| GAGTTCCCGAATGTATTCAT+CGG | - | chr8_4:20032538-20032557 | Msa1318120:intron | 40.0% | |
| AGTTCCCGAATGTATTCATC+GGG | - | chr8_4:20032539-20032558 | Msa1318120:intron | 40.0% | |
| !! | TTTCGGGTGATTTGGTTGAT+AGG | - | chr8_4:20032654-20032673 | Msa1318120:intron | 40.0% |
| !! | TACATGGAAGAGTGTTGTTG+AGG | - | chr8_4:20032685-20032704 | Msa1318120:intron | 40.0% |
| ! | AAGGTTAAGGAAGGTTCTGA+TGG | - | chr8_4:20032728-20032747 | Msa1318120:intron | 40.0% |
| ACGACCACCATGTTAAGATA+AGG | + | chr8_4:20032791-20032810 | None:intergenic | 40.0% | |
| TAACTGCTACTCTAGTAGGT+TGG | - | chr8_4:20032828-20032847 | Msa1318120:intron | 40.0% | |
| TTTCCTTGAAGCAGAGAAAC+CGG | + | chr8_4:20032905-20032924 | None:intergenic | 40.0% | |
| TGCTTCAAGGAAACTTGTCA+GGG | - | chr8_4:20032912-20032931 | Msa1318120:intron | 40.0% | |
| !!! | AAAAAGCTTTTGGGGTGCTA+TGG | - | chr8_4:20032952-20032971 | Msa1318120:intron | 40.0% |
| AGGTAACCAAATATCGCACT+GGG | + | chr8_4:20032982-20033001 | None:intergenic | 40.0% | |
| AAGGTAACCAAATATCGCAC+TGG | + | chr8_4:20032983-20033002 | None:intergenic | 40.0% | |
| TATTGCGAAGCTATAGCTGT+TGG | + | chr8_4:20033335-20033354 | None:intergenic | 40.0% | |
| TTGTCGAGTCAAAGTGTACT+TGG | - | chr8_4:20033440-20033459 | Msa1318120:intron | 40.0% | |
| CCAAATGAGCTAAGCTCATA+GGG | + | chr8_4:20033879-20033898 | None:intergenic | 40.0% | |
| ACCAAATGAGCTAAGCTCAT+AGG | + | chr8_4:20033880-20033899 | None:intergenic | 40.0% | |
| TGAGCTTAGCTCATTTGGTA+AGG | - | chr8_4:20033881-20033900 | Msa1318120:intron | 40.0% | |
| GAGCTTAGCTCATTTGGTAA+GGG | - | chr8_4:20033882-20033901 | Msa1318120:intron | 40.0% | |
| ! | AATGAATAAGTGGGGTGTCT+GGG | + | chr8_4:20033943-20033962 | None:intergenic | 40.0% |
| ! | AAATGAATAAGTGGGGTGTC+TGG | + | chr8_4:20033944-20033963 | None:intergenic | 40.0% |
| GTACTTGGCAATGTGTTTAG+CGG | - | chr8_4:20034496-20034515 | Msa1318120:intron | 40.0% | |
| GTACATTCAAGGGTAGAATC+AGG | - | chr8_4:20034802-20034821 | Msa1318120:intron | 40.0% | |
| TGAGAAATTGTGCAAACTGC+AGG | - | chr8_4:20035043-20035062 | Msa1318120:intron | 40.0% | |
| AAAAAAAGGGGGGAAAAGGA+AGG | + | chr8_4:20035181-20035200 | None:intergenic | 40.0% | |
| CTTCAGCAAAACAGAGAAGT+AGG | - | chr8_4:20035252-20035271 | Msa1318120:intron | 40.0% | |
| ATACACAACAGACATGCAGT+GGG | + | chr8_4:20035464-20035483 | None:intergenic | 40.0% | |
| AATACACAACAGACATGCAG+TGG | + | chr8_4:20035465-20035484 | None:intergenic | 40.0% | |
| ! | AGCCTGCTCAAACTATTTCT+TGG | + | chr8_4:20035542-20035561 | None:intergenic | 40.0% |
| ACAATGCATTACCATTCGAC+TGG | - | chr8_4:20035783-20035802 | Msa1318120:intron | 40.0% | |
| CAATGCATTACCATTCGACT+GGG | - | chr8_4:20035784-20035803 | Msa1318120:intron | 40.0% | |
| !! | ACTTGCTGTTTCAGTCATCA+TGG | - | chr8_4:20036120-20036139 | Msa1318120:intron | 40.0% |
| GGTAAGAATGGCACGATAAT+CGG | + | chr8_4:20036207-20036226 | None:intergenic | 40.0% | |
| TGGATACAACCTCAAGAACA+TGG | - | chr8_4:20036382-20036401 | Msa1318120:intron | 40.0% | |
| TCTATACCTTCTTGGCTACT+TGG | + | chr8_4:20036804-20036823 | None:intergenic | 40.0% | |
| GCTATGCTTCTATACCTTCT+TGG | + | chr8_4:20036812-20036831 | None:intergenic | 40.0% | |
| CTCCCTCAACCTCTAATTAT+TGG | + | chr8_4:20037090-20037109 | None:intergenic | 40.0% | |
| !! | AAGAATCATGGTGTTGCTCT+TGG | - | chr8_4:20037303-20037322 | Msa1318120:five_prime_UTR | 40.0% |
| CCCAAGGGTTTAATTCACCT+AGG | - | chr8_4:20032456-20032475 | Msa1318120:intron | 45.0% | |
| CCCTAGGTGAATTAAACCCT+TGG | + | chr8_4:20032460-20032479 | None:intergenic | 45.0% | |
| CAGACCCGATGAATACATTC+GGG | + | chr8_4:20032546-20032565 | None:intergenic | 45.0% | |
| CCAGACCCGATGAATACATT+CGG | + | chr8_4:20032547-20032566 | None:intergenic | 45.0% | |
| CGAATGTATTCATCGGGTCT+GGG | - | chr8_4:20032545-20032564 | Msa1318120:intron | 45.0% | |
| GGAGGGGAAGGAATTAAGAA+TGG | - | chr8_4:20032566-20032585 | Msa1318120:intron | 45.0% | |
| GTGAAACAGAAGTGGGTGTT+GGG | - | chr8_4:20032588-20032607 | Msa1318120:intron | 45.0% | |
| ACTGGTGTGAGTGATGTGAA+GGG | - | chr8_4:20032611-20032630 | Msa1318120:intron | 45.0% | |
| ! | TTCGGTTGTTTCGGGTGATT+TGG | - | chr8_4:20032646-20032665 | Msa1318120:intron | 45.0% |
| GTTGAGGCAGTTTCATATGC+TGG | - | chr8_4:20032701-20032720 | Msa1318120:intron | 45.0% | |
| GCTGGTGATAAGGTTAAGGA+AGG | - | chr8_4:20032719-20032738 | Msa1318120:intron | 45.0% | |
| TCTTAACATGGTGGTCGTTC+CGG | - | chr8_4:20032793-20032812 | Msa1318120:intron | 45.0% | |
| ! | GCAGTTAAAGTACCACCAAC+CGG | + | chr8_4:20032815-20032834 | None:intergenic | 45.0% |
| ! | TCATCTTGCCGAGGATTTTG+AGG | - | chr8_4:20032852-20032871 | Msa1318120:intron | 45.0% |
| CTGCTTCAAGGAAACTTGTC+AGG | - | chr8_4:20032911-20032930 | Msa1318120:intron | 45.0% | |
| GCTTCAAGGAAACTTGTCAG+GGG | - | chr8_4:20032913-20032932 | Msa1318120:intron | 45.0% | |
| !! | TGGTATAATGGCTTTGGCTG+AGG | - | chr8_4:20033523-20033542 | Msa1318120:intron | 45.0% |
| ATTGTTACAGTTGGCGGTGT+AGG | - | chr8_4:20033569-20033588 | Msa1318120:intron | 45.0% | |
| CCCTATGAGCTTAGCTCATT+TGG | - | chr8_4:20033876-20033895 | Msa1318120:intron | 45.0% | |
| GGTGAATTTCTCTAGCCACT+AGG | - | chr8_4:20033967-20033986 | Msa1318120:intron | 45.0% | |
| !! | TTTTGGGTCAAGTAGCCTAG+TGG | + | chr8_4:20033985-20034004 | None:intergenic | 45.0% |
| AGGATCGAATGAGAATGTGC+TGG | - | chr8_4:20034095-20034114 | Msa1318120:intron | 45.0% | |
| CACATGTCTCAGTCACCAAT+TGG | + | chr8_4:20034289-20034308 | None:intergenic | 45.0% | |
| TTAGTGTAAGACTCACGAGC+TGG | + | chr8_4:20034317-20034336 | None:intergenic | 45.0% | |
| GAAGGGCTTAGAAAACTGCA+TGG | + | chr8_4:20034527-20034546 | None:intergenic | 45.0% | |
| AAATTGTGCAAACTGCAGGC+TGG | - | chr8_4:20035047-20035066 | Msa1318120:intron | 45.0% | |
| TGGATCGATAGAAGGTCAAG+TGG | - | chr8_4:20035067-20035086 | Msa1318120:intron | 45.0% | |
| ATCGATAGAAGGTCAAGTGG+TGG | - | chr8_4:20035070-20035089 | Msa1318120:intron | 45.0% | |
| ! | GAAGGTCAAGTGGTGGAAAT+TGG | - | chr8_4:20035077-20035096 | Msa1318120:intron | 45.0% |
| ACAATGACTGGGAACTTCTC+AGG | + | chr8_4:20035128-20035147 | None:intergenic | 45.0% | |
| ATGAGTTCGGCACAATGACT+GGG | + | chr8_4:20035139-20035158 | None:intergenic | 45.0% | |
| AATGAGTTCGGCACAATGAC+TGG | + | chr8_4:20035140-20035159 | None:intergenic | 45.0% | |
| GTGAGGCATGAGAATACTCT+TGG | + | chr8_4:20035492-20035511 | None:intergenic | 45.0% | |
| ATGCGTGACAAGAAACAGCA+GGG | + | chr8_4:20036335-20036354 | None:intergenic | 45.0% | |
| AGTGGTGTACCATGTTCTTG+AGG | + | chr8_4:20036394-20036413 | None:intergenic | 45.0% | |
| AAACGCCAACCTATTACCTC+CGG | - | chr8_4:20036560-20036579 | Msa1318120:CDS | 45.0% | |
| ATGTTGCATCGCGAGTTTGA+GGG | - | chr8_4:20036942-20036961 | Msa1318120:CDS | 45.0% | |
| !! | AAACAAAAAAAAAAAAAAAA+GGG | + | chr8_4:20035194-20035213 | None:intergenic | 5.0% |
| !! | AAAACAAAAAAAAAAAAAAA+AGG | + | chr8_4:20035195-20035214 | None:intergenic | 5.0% |
| !!! | TATTTTAAATTCATTTATTT+GGG | - | chr8_4:20035943-20035962 | Msa1318120:CDS | 5.0% |
| CCGAATGTATTCATCGGGTC+TGG | - | chr8_4:20032544-20032563 | Msa1318120:intron | 50.0% | |
| ATGTATTCATCGGGTCTGGG+AGG | - | chr8_4:20032548-20032567 | Msa1318120:intron | 50.0% | |
| TGTATTCATCGGGTCTGGGA+GGG | - | chr8_4:20032549-20032568 | Msa1318120:intron | 50.0% | |
| GGTGAAACAGAAGTGGGTGT+TGG | - | chr8_4:20032587-20032606 | Msa1318120:intron | 50.0% | |
| GACTGGTGTGAGTGATGTGA+AGG | - | chr8_4:20032610-20032629 | Msa1318120:intron | 50.0% | |
| GTGTGAGTGATGTGAAGGGT+GGG | - | chr8_4:20032615-20032634 | Msa1318120:intron | 50.0% | |
| TGTGAGTGATGTGAAGGGTG+GGG | - | chr8_4:20032616-20032635 | Msa1318120:intron | 50.0% | |
| !! | GGGTGGTGATTCGGTTGTTT+CGG | - | chr8_4:20032637-20032656 | Msa1318120:intron | 50.0% |
| !! | GGTGGTGATTCGGTTGTTTC+GGG | - | chr8_4:20032638-20032657 | Msa1318120:intron | 50.0% |
| !! | TAGGTTGGTTCATCTTGCCG+AGG | - | chr8_4:20032843-20032862 | Msa1318120:intron | 50.0% |
| AGTCCGGTTTCTCTGCTTCA+AGG | - | chr8_4:20032899-20032918 | Msa1318120:intron | 50.0% | |
| GGAAGACCCAGTGCGATATT+TGG | - | chr8_4:20032973-20032992 | Msa1318120:intron | 50.0% | |
| AATACCTTGCACCCACTTGG+AGG | - | chr8_4:20033351-20033370 | Msa1318120:intron | 50.0% | |
| ATACCTTGCACCCACTTGGA+GGG | - | chr8_4:20033352-20033371 | Msa1318120:intron | 50.0% | |
| TTTGCTGCCAGAGACGTACT+TGG | - | chr8_4:20034481-20034500 | Msa1318120:intron | 50.0% | |
| CACATTGCCAAGTACGTCTC+TGG | + | chr8_4:20034491-20034510 | None:intergenic | 50.0% | |
| ! | TGTTTTGCTGAAGCGACTGC+AGG | + | chr8_4:20035245-20035264 | None:intergenic | 50.0% |
| CTGTGAGGAAACTTCTCCAG+AGG | - | chr8_4:20035985-20036004 | Msa1318120:CDS | 50.0% | |
| AATGGCACGATAATCGGCAC+GGG | + | chr8_4:20036201-20036220 | None:intergenic | 50.0% | |
| GAATGGCACGATAATCGGCA+CGG | + | chr8_4:20036202-20036221 | None:intergenic | 50.0% | |
| CATGCGTGACAAGAAACAGC+AGG | + | chr8_4:20036336-20036355 | None:intergenic | 50.0% | |
| !! | CTGCTGTTTCTTGTCACGCA+TGG | - | chr8_4:20036334-20036353 | Msa1318120:intron | 50.0% |
| ACTTTCTGACTAGCACACGC+CGG | + | chr8_4:20036582-20036601 | None:intergenic | 50.0% | |
| CATGTTGCATCGCGAGTTTG+AGG | - | chr8_4:20036941-20036960 | Msa1318120:CDS | 50.0% | |
| TGTTGCATCGCGAGTTTGAG+GGG | - | chr8_4:20036943-20036962 | Msa1318120:CDS | 50.0% | |
| TTAGAGGTTGAGGGAGACCA+TGG | - | chr8_4:20037094-20037113 | Msa1318120:CDS | 50.0% | |
| ! | GTGTTGCTCTTGGAAGCACA+TGG | - | chr8_4:20037313-20037332 | Msa1318120:intron | 50.0% |
| GTATTCATCGGGTCTGGGAG+GGG | - | chr8_4:20032550-20032569 | Msa1318120:intron | 55.0% | |
| !! | ACAGAAGTGGGTGTTGGGAC+TGG | - | chr8_4:20032593-20032612 | Msa1318120:intron | 55.0% |
| GGTGTGAGTGATGTGAAGGG+TGG | - | chr8_4:20032614-20032633 | Msa1318120:intron | 55.0% | |
| GTGAGTGATGTGAAGGGTGG+GGG | - | chr8_4:20032617-20032636 | Msa1318120:intron | 55.0% | |
| AACATGGTGGTCGTTCCGGT+TGG | - | chr8_4:20032797-20032816 | Msa1318120:intron | 55.0% | |
| !! | AGTTGTCGAGGTAACGGGTG+TGG | - | chr8_4:20033103-20033122 | Msa1318120:CDS | 55.0% |
| CGCAATACCTTGCACCCACT+TGG | - | chr8_4:20033348-20033367 | Msa1318120:intron | 55.0% | |
| TACCTTGCACCCACTTGGAG+GGG | - | chr8_4:20033353-20033372 | Msa1318120:intron | 55.0% | |
| ATCACTGCACCCCTCCAAGT+GGG | + | chr8_4:20033365-20033384 | None:intergenic | 55.0% | |
| AATCACTGCACCCCTCCAAG+TGG | + | chr8_4:20033366-20033385 | None:intergenic | 55.0% | |
| !! | ATGGCTTTGGCTGAGGCTTG+TGG | - | chr8_4:20033530-20033549 | Msa1318120:intron | 55.0% |
| TTTGGCTGAGGCTTGTGGTG+TGG | - | chr8_4:20033535-20033554 | Msa1318120:intron | 55.0% | |
| GTTACAGTTGGCGGTGTAGG+AGG | - | chr8_4:20033572-20033591 | Msa1318120:intron | 55.0% | |
| CACAATATGTGCAAGGGCCG+AGG | - | chr8_4:20033911-20033930 | Msa1318120:intron | 55.0% | |
| CTGCAGGCTGGATCGATAGA+AGG | - | chr8_4:20035059-20035078 | Msa1318120:intron | 55.0% | |
| TGCAGGAGTCCTGTTCTCCT+TGG | - | chr8_4:20035618-20035637 | Msa1318120:intron | 55.0% | |
| ACACGCCGGAGGTAATAGGT+TGG | + | chr8_4:20036568-20036587 | None:intergenic | 55.0% | |
| TAGCACACGCCGGAGGTAAT+AGG | + | chr8_4:20036572-20036591 | None:intergenic | 55.0% | |
| GCACTGCCAAGTAGCCAAGA+AGG | - | chr8_4:20036795-20036814 | Msa1318120:CDS | 55.0% | |
| AGTGATGTGAAGGGTGGGGG+TGG | - | chr8_4:20032620-20032639 | Msa1318120:intron | 60.0% | |
| GAAGGGTGGGGGTGGTGATT+CGG | - | chr8_4:20032628-20032647 | Msa1318120:intron | 60.0% | |
| ATGGTGGTCGTTCCGGTTGG+TGG | - | chr8_4:20032800-20032819 | Msa1318120:intron | 60.0% | |
| AGCCGATGCGACCTCAATCG+CGG | - | chr8_4:20033160-20033179 | Msa1318120:CDS | 60.0% | |
| GACCGCGATTGAGGTCGCAT+CGG | + | chr8_4:20033165-20033184 | None:intergenic | 60.0% | |
| CCACAATGCGACCGCGATTG+AGG | + | chr8_4:20033174-20033193 | None:intergenic | 60.0% | |
| CCTCAATCGCGGTCGCATTG+TGG | - | chr8_4:20033171-20033190 | Msa1318120:CDS | 60.0% | |
| GGGTGTCTGGGTTCGAACCT+CGG | + | chr8_4:20033931-20033950 | None:intergenic | 60.0% | |
| GGGGAAAAGGAAGGCCTACC+TGG | + | chr8_4:20035172-20035191 | None:intergenic | 60.0% | |
| TTCTGACTAGCACACGCCGG+AGG | + | chr8_4:20036579-20036598 | None:intergenic | 60.0% | |
| TCATCGGGTCTGGGAGGGGA+AGG | - | chr8_4:20032554-20032573 | Msa1318120:intron | 65.0% | |
| CACCCCTCCAAGTGGGTGCA+AGG | + | chr8_4:20033358-20033377 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 20031873 | 20037566 | 20031873 | ID=Msa1318120;Name=Msa1318120 |
| chr8_4 | mRNA | 20031873 | 20037566 | 20031873 | ID=Msa1318120-mRNA-1;Parent=Msa1318120;Name=Msa1318120-mRNA-1;_AED=0.23;_eAED=0.23;_QI=162|1|1|1|0.83|0.71|7|216|550 |
| chr8_4 | exon | 20031873 | 20032196 | 20031873 | ID=Msa1318120-mRNA-1:exon:7324;Parent=Msa1318120-mRNA-1 |
| chr8_4 | exon | 20033036 | 20033257 | 20033036 | ID=Msa1318120-mRNA-1:exon:7323;Parent=Msa1318120-mRNA-1 |
| chr8_4 | exon | 20034267 | 20034374 | 20034267 | ID=Msa1318120-mRNA-1:exon:7322;Parent=Msa1318120-mRNA-1 |
| chr8_4 | exon | 20034872 | 20034972 | 20034872 | ID=Msa1318120-mRNA-1:exon:7321;Parent=Msa1318120-mRNA-1 |
| chr8_4 | exon | 20035846 | 20036123 | 20035846 | ID=Msa1318120-mRNA-1:exon:7320;Parent=Msa1318120-mRNA-1 |
| chr8_4 | exon | 20036419 | 20037325 | 20036419 | ID=Msa1318120-mRNA-1:exon:7319;Parent=Msa1318120-mRNA-1 |
| chr8_4 | exon | 20037476 | 20037566 | 20037476 | ID=Msa1318120-mRNA-1:exon:7318;Parent=Msa1318120-mRNA-1 |
| chr8_4 | five_prime_UTR | 20037476 | 20037566 | 20037476 | ID=Msa1318120-mRNA-1:five_prime_utr;Parent=Msa1318120-mRNA-1 |
| chr8_4 | five_prime_UTR | 20037255 | 20037325 | 20037255 | ID=Msa1318120-mRNA-1:five_prime_utr;Parent=Msa1318120-mRNA-1 |
| chr8_4 | CDS | 20036419 | 20037254 | 20036419 | ID=Msa1318120-mRNA-1:cds;Parent=Msa1318120-mRNA-1 |
| chr8_4 | CDS | 20035846 | 20036123 | 20035846 | ID=Msa1318120-mRNA-1:cds;Parent=Msa1318120-mRNA-1 |
| chr8_4 | CDS | 20034872 | 20034972 | 20034872 | ID=Msa1318120-mRNA-1:cds;Parent=Msa1318120-mRNA-1 |
| chr8_4 | CDS | 20034267 | 20034374 | 20034267 | ID=Msa1318120-mRNA-1:cds;Parent=Msa1318120-mRNA-1 |
| chr8_4 | CDS | 20033036 | 20033257 | 20033036 | ID=Msa1318120-mRNA-1:cds;Parent=Msa1318120-mRNA-1 |
| chr8_4 | CDS | 20032089 | 20032196 | 20032089 | ID=Msa1318120-mRNA-1:cds;Parent=Msa1318120-mRNA-1 |
| chr8_4 | three_prime_UTR | 20031873 | 20032088 | 20031873 | ID=Msa1318120-mRNA-1:three_prime_utr;Parent=Msa1318120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
