Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0580530 | XP_003611238.2 | 95.197 | 687 | 14 | 3 | 1 | 686 | 1 | 669 | 0.0 | 1339 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0580530 | sp|Q9C5X3|KEULE_ARATH | 71.912 | 680 | 160 | 6 | 13 | 686 | 12 | 666 | 0.0 | 1015 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0580530 | G7KG68 | 95.197 | 687 | 14 | 3 | 1 | 686 | 1 | 669 | 0.0 | 1339 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007440 | Msa0580530 | 0.807005 | 6.244544e-50 | -8.615850e-47 |
| Msa0015090 | Msa0580530 | 0.822992 | 1.760225e-53 | -8.615850e-47 |
| Msa0043730 | Msa0580530 | 0.816177 | 6.324864e-52 | -8.615850e-47 |
| Msa0049750 | Msa0580530 | 0.810938 | 8.986979e-51 | -8.615850e-47 |
| Msa0091570 | Msa0580530 | 0.801356 | 9.359293e-49 | -8.615850e-47 |
| Msa0096030 | Msa0580530 | 0.931552 | 3.189031e-94 | -8.615850e-47 |
| Msa0115270 | Msa0580530 | 0.802660 | 5.049571e-49 | -8.615850e-47 |
| Msa0115390 | Msa0580530 | 0.801472 | 8.861501e-49 | -8.615850e-47 |
| Msa0130520 | Msa0580530 | 0.821845 | 3.251527e-53 | -8.615850e-47 |
| Msa0138020 | Msa0580530 | 0.808894 | 2.474994e-50 | -8.615850e-47 |
| Msa0182570 | Msa0580530 | 0.816573 | 5.158963e-52 | -8.615850e-47 |
| Msa0206010 | Msa0580530 | 0.816147 | 6.424005e-52 | -8.615850e-47 |
| Msa0217680 | Msa0580530 | 0.805801 | 1.120345e-49 | -8.615850e-47 |
| Msa0236420 | Msa0580530 | 0.805989 | 1.022444e-49 | -8.615850e-47 |
| Msa0385490 | Msa0580530 | 0.813058 | 3.102405e-51 | -8.615850e-47 |
| Msa0394340 | Msa0580530 | 0.804935 | 1.700899e-49 | -8.615850e-47 |
| Msa0442200 | Msa0580530 | 0.818802 | 1.620786e-52 | -8.615850e-47 |
| Msa0457510 | Msa0580530 | 0.803361 | 3.616443e-49 | -8.615850e-47 |
| Msa0477260 | Msa0580530 | 0.805084 | 1.583428e-49 | -8.615850e-47 |
| Msa0257500 | Msa0580530 | 0.818273 | 2.136324e-52 | -8.615850e-47 |
| Msa0265380 | Msa0580530 | 0.801307 | 9.578559e-49 | -8.615850e-47 |
| Msa0270960 | Msa0580530 | 0.807739 | 4.363297e-50 | -8.615850e-47 |
| Msa0326110 | Msa0580530 | 0.809516 | 1.820643e-50 | -8.615850e-47 |
| Msa0357830 | Msa0580530 | 0.801718 | 7.890534e-49 | -8.615850e-47 |
| Msa0358860 | Msa0580530 | 0.816988 | 4.162305e-52 | -8.615850e-47 |
| Msa0489610 | Msa0580530 | 0.815032 | 1.137678e-51 | -8.615850e-47 |
| Msa0522070 | Msa0580530 | 0.802322 | 5.928639e-49 | -8.615850e-47 |
| Msa0534900 | Msa0580530 | 0.800205 | 1.607656e-48 | -8.615850e-47 |
| Msa0549780 | Msa0580530 | 0.834619 | 2.699116e-56 | -8.615850e-47 |
| Msa0562440 | Msa0580530 | 0.806432 | 8.248704e-50 | -8.615850e-47 |
| Msa0580530 | Msa0588240 | 0.814970 | 1.174670e-51 | -8.615850e-47 |
| Msa0580530 | Msa0608710 | 0.817783 | 2.756816e-52 | -8.615850e-47 |
| Msa0580530 | Msa0620960 | 0.804111 | 2.526423e-49 | -8.615850e-47 |
| Msa0580530 | Msa0621790 | 0.931107 | 6.149154e-94 | -8.615850e-47 |
| Msa0580530 | Msa0629650 | 0.810716 | 1.003649e-50 | -8.615850e-47 |
| Msa0580530 | Msa0641670 | 0.816038 | 6.793740e-52 | -8.615850e-47 |
| Msa0580530 | Msa0649350 | 0.834779 | 2.460365e-56 | -8.615850e-47 |
| Msa0580530 | Msa0664970 | 0.800644 | 1.308181e-48 | -8.615850e-47 |
| Msa0580530 | Msa0679550 | 0.803058 | 4.178470e-49 | -8.615850e-47 |
| Msa0580530 | Msa0705820 | 0.825278 | 5.114344e-54 | -8.615850e-47 |
| Msa0580530 | Msa0731180 | 0.808462 | 3.060397e-50 | -8.615850e-47 |
| Msa0580530 | Msa0748070 | 0.900842 | 4.887311e-78 | -8.615850e-47 |
| Msa0580530 | Msa0750850 | 0.806000 | 1.017467e-49 | -8.615850e-47 |
| Msa0580530 | Msa0751210 | 0.804758 | 1.852599e-49 | -8.615850e-47 |
| Msa0580530 | Msa0751850 | 0.807008 | 6.233060e-50 | -8.615850e-47 |
| Msa0580530 | Msa0777620 | 0.800816 | 1.207027e-48 | -8.615850e-47 |
| Msa0580530 | Msa0788540 | 0.801432 | 9.030659e-49 | -8.615850e-47 |
| Msa0580530 | Msa0795720 | 0.935487 | 7.852946e-97 | -8.615850e-47 |
| Msa0580530 | Msa0805920 | 0.816343 | 5.807922e-52 | -8.615850e-47 |
| Msa0580530 | Msa0831590 | 0.806031 | 1.002067e-49 | -8.615850e-47 |
| Msa0580530 | Msa0831850 | 0.817110 | 3.907377e-52 | -8.615850e-47 |
| Msa0580530 | Msa0832150 | 0.804707 | 1.897970e-49 | -8.615850e-47 |
| Msa0580530 | Msa0833460 | 0.931861 | 2.017269e-94 | -8.615850e-47 |
| Msa0580530 | Msa0844110 | 0.820920 | 5.314159e-53 | -8.615850e-47 |
| Msa0580530 | Msa0861470 | 0.835422 | 1.693968e-56 | -8.615850e-47 |
| Msa0580530 | Msa0861570 | 0.831705 | 1.434590e-55 | -8.615850e-47 |
| Msa0580530 | Msa0870150 | 0.806672 | 7.341423e-50 | -8.615850e-47 |
| Msa0580530 | Msa0947760 | 0.801967 | 7.013461e-49 | -8.615850e-47 |
| Msa0580530 | Msa0958920 | 0.808345 | 3.242360e-50 | -8.615850e-47 |
| Msa0580530 | Msa0974630 | 0.800560 | 1.361291e-48 | -8.615850e-47 |
| Msa0580530 | Msa0996170 | 0.808989 | 2.361921e-50 | -8.615850e-47 |
| Msa0580530 | Msa1012830 | 0.816042 | 6.779661e-52 | -8.615850e-47 |
| Msa0580530 | Msa1021540 | 0.802330 | 5.906338e-49 | -8.615850e-47 |
| Msa0580530 | Msa1034150 | 0.819660 | 1.033748e-52 | -8.615850e-47 |
| Msa0580530 | Msa1071320 | 0.830978 | 2.165163e-55 | -8.615850e-47 |
| Msa0580530 | Msa1090260 | 0.802016 | 6.853613e-49 | -8.615850e-47 |
| Msa0580530 | Msa1140230 | 0.805593 | 1.238627e-49 | -8.615850e-47 |
| Msa0580530 | Msa1150710 | 0.806978 | 6.325519e-50 | -8.615850e-47 |
| Msa0580530 | Msa1174040 | 0.813471 | 2.517621e-51 | -8.615850e-47 |
| Msa0580530 | Msa1208380 | 0.817699 | 2.880366e-52 | -8.615850e-47 |
| Msa0580530 | Msa1217470 | 0.805673 | 1.191426e-49 | -8.615850e-47 |
| Msa0580530 | Msa1224810 | 0.816592 | 5.108929e-52 | -8.615850e-47 |
| Msa0580530 | Msa1267260 | 0.805385 | 1.369511e-49 | -8.615850e-47 |
| Msa0580530 | Msa1276440 | 0.803284 | 3.751354e-49 | -8.615850e-47 |
| Msa0580530 | Msa1306560 | 0.803772 | 2.972553e-49 | -8.615850e-47 |
| Msa0580530 | Msa1348850 | 0.818527 | 1.870785e-52 | -8.615850e-47 |
| Msa0580530 | Msa1355890 | 0.823002 | 1.750939e-53 | -8.615850e-47 |
| Msa0580530 | Msa1388860 | 0.806720 | 7.172535e-50 | -8.615850e-47 |
| Msa0580530 | Msa1412890 | 0.804382 | 2.218566e-49 | -8.615850e-47 |
| Msa0580530 | Msa1435370 | 0.803658 | 3.138601e-49 | -8.615850e-47 |
| Msa0580530 | Msa1438840 | 0.810253 | 1.263790e-50 | -8.615850e-47 |
| Msa0580530 | Msa1440910 | 0.800926 | 1.145936e-48 | -8.615850e-47 |
| Msa0580530 | Msa1444740 | 0.811331 | 7.386243e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0580530 | MtrunA17_Chr5g0398701 | 95.197 | 687 | 14 | 3 | 1 | 686 | 1 | 669 | 0.0 | 1339 |
| Msa0580530 | MtrunA17_Chr4g0056851 | 80.118 | 679 | 107 | 6 | 11 | 686 | 116 | 769 | 0.0 | 1138 |
| Msa0580530 | MtrunA17_Chr4g0010911 | 55.820 | 713 | 221 | 9 | 27 | 669 | 5 | 693 | 0.0 | 786 |
| Msa0580530 | MtrunA17_Chr4g0067491 | 51.128 | 133 | 37 | 1 | 265 | 369 | 7 | 139 | 5.17e-36 | 132 |
| Msa0580530 | MtrunA17_Chr3g0126071 | 24.582 | 419 | 265 | 13 | 42 | 444 | 19 | 402 | 7.10e-21 | 97.1 |
| Msa0580530 | MtrunA17_Chr4g0051171 | 22.010 | 418 | 287 | 12 | 40 | 439 | 34 | 430 | 3.86e-17 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0580530 | AT1G12360.1 | 71.912 | 680 | 160 | 6 | 13 | 686 | 12 | 666 | 0.0 | 1015 |
| Msa0580530 | AT4G12120.1 | 62.426 | 676 | 221 | 7 | 16 | 686 | 15 | 662 | 0.0 | 877 |
| Msa0580530 | AT1G02010.1 | 63.274 | 678 | 202 | 9 | 15 | 679 | 17 | 660 | 0.0 | 860 |
| Msa0580530 | AT1G02010.2 | 61.652 | 678 | 200 | 10 | 15 | 679 | 17 | 647 | 0.0 | 850 |
| Msa0580530 | AT1G02010.4 | 60.593 | 708 | 202 | 10 | 15 | 679 | 17 | 690 | 0.0 | 843 |
| Msa0580530 | AT1G02010.5 | 63.142 | 662 | 197 | 9 | 31 | 679 | 1 | 628 | 0.0 | 835 |
| Msa0580530 | AT1G02010.3 | 62.378 | 614 | 184 | 9 | 15 | 615 | 17 | 596 | 0.0 | 780 |
| Msa0580530 | AT1G02010.6 | 61.949 | 544 | 161 | 8 | 149 | 679 | 1 | 511 | 0.0 | 664 |
| Msa0580530 | AT1G77140.1 | 24.000 | 425 | 262 | 14 | 42 | 444 | 19 | 404 | 1.17e-18 | 90.5 |
| Msa0580530 | AT2G17980.1 | 22.195 | 401 | 273 | 12 | 28 | 409 | 19 | 399 | 5.63e-15 | 79.0 |
Find 155 sgRNAs with CRISPR-Local
Find 549 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTAATTTGCTTGAAATTT+TGG | 0.120193 | 4_1:-85685152 | None:intergenic |
| TCCCATTGCTGCAGTTAATT+TGG | 0.139784 | 4_1:+85694284 | Msa0580530:three_prime_UTR |
| CATAACCTGTACCTCTATTA+TGG | 0.176535 | 4_1:-85692195 | None:intergenic |
| AGAGCATTAGAGGATCTATT+TGG | 0.212778 | 4_1:+85688734 | Msa0580530:CDS |
| GGAGTCAGGACTGCGGGAAC+TGG | 0.293146 | 4_1:+85691496 | Msa0580530:CDS |
| CAAAGCTTGCTGCTGGAGTC+TGG | 0.293765 | 4_1:+85689027 | Msa0580530:CDS |
| ACATACCTTCCAAGTTGATT+TGG | 0.296521 | 4_1:-85685373 | None:intergenic |
| TGAGAGAAAAGAAGTTCTTT+TGG | 0.301336 | 4_1:+85689431 | Msa0580530:CDS |
| TGATACCATGCAGATGAATT+TGG | 0.305087 | 4_1:+85687918 | Msa0580530:intron |
| AAAACTAATTCTCTGGAAAT+AGG | 0.306579 | 4_1:-85687745 | None:intergenic |
| GTCTTCTTGATCCAGCTTGC+AGG | 0.306762 | 4_1:+85691452 | Msa0580530:intron |
| GAAAACTAAATAAATTATTC+TGG | 0.306811 | 4_1:-85694390 | None:intergenic |
| CTGAATAGGGAAATTATTCT+AGG | 0.309246 | 4_1:+85694001 | Msa0580530:CDS |
| GTGTCATGATTTGCTGAATA+TGG | 0.312135 | 4_1:+85689271 | Msa0580530:CDS |
| GTCTCAGTCTGAGGAAAATT+AGG | 0.327470 | 4_1:-85689080 | None:intergenic |
| CGTCACATACTTCCTGTATA+AGG | 0.331884 | 4_1:-85687620 | None:intergenic |
| ACCATATACCTGGCAATCTA+TGG | 0.332263 | 4_1:-85687950 | None:intergenic |
| CGACTATTGTACATCATATC+TGG | 0.332409 | 4_1:-85694206 | None:intergenic |
| CACGAGAAATCAACTGTCTA+AGG | 0.336896 | 4_1:+85692493 | Msa0580530:CDS |
| TAGAAATTACCTTTACCTTC+TGG | 0.353031 | 4_1:-85692100 | None:intergenic |
| AAACGTTTGACTGGTGCTTT+CGG | 0.359481 | 4_1:+85692062 | Msa0580530:CDS |
| CAAGCGTGTATGTTAATTCA+TGG | 0.365375 | 4_1:-85694412 | None:intergenic |
| ACTCCAGCAGCAAGCTTTGT+AGG | 0.367263 | 4_1:-85689023 | None:intergenic |
| AGCTTACTAGAAGGCTGAAT+AGG | 0.377664 | 4_1:+85693987 | Msa0580530:CDS |
| AAATAATGAGAGAGCATTAG+AGG | 0.380377 | 4_1:+85688724 | Msa0580530:CDS |
| TGACGAGTGGATGAATATTC+AGG | 0.384640 | 4_1:+85692454 | Msa0580530:CDS |
| ATAACCTGTACCTCTATTAT+GGG | 0.393071 | 4_1:-85692194 | None:intergenic |
| TATTTCCAGAGAATTAGTTT+TGG | 0.393323 | 4_1:+85687747 | Msa0580530:CDS |
| AATGTCCAAAACTAATTCTC+TGG | 0.394956 | 4_1:-85687752 | None:intergenic |
| CTGAGGGTGTCGTCTCGATT+AGG | 0.402968 | 4_1:+85687784 | Msa0580530:CDS |
| AGGACTGCGGGAACTGGGCC+AGG | 0.408525 | 4_1:+85691502 | Msa0580530:CDS |
| AACAGTATCATTAGGGAGTC+AGG | 0.409285 | 4_1:+85691482 | Msa0580530:CDS |
| GCTTACTAGAAGGCTGAATA+GGG | 0.411575 | 4_1:+85693988 | Msa0580530:CDS |
| TTCTAGTGATTTCAAGAAGA+TGG | 0.412872 | 4_1:+85693810 | Msa0580530:CDS |
| GAGCATTAGAGGATCTATTT+GGG | 0.412978 | 4_1:+85688735 | Msa0580530:CDS |
| TATGTCCACTCATGTATTAC+AGG | 0.422700 | 4_1:-85689239 | None:intergenic |
| CTTGTCGGCACGCAGTGATT+CGG | 0.429467 | 4_1:+85693774 | Msa0580530:intron |
| TGTGTTTGCGTCTAGGGACT+TGG | 0.431530 | 4_1:-85688976 | None:intergenic |
| CGACTATTTGTATTCATTGT+CGG | 0.433005 | 4_1:+85693838 | Msa0580530:CDS |
| TGAGAAATTTGACGGAGAAA+AGG | 0.436497 | 4_1:+85691817 | Msa0580530:CDS |
| GTGAATAACTTGAGAATGCT+TGG | 0.439454 | 4_1:+85692020 | Msa0580530:CDS |
| GATATTCAACTCCTTGTGGC+TGG | 0.443301 | 4_1:+85694306 | Msa0580530:three_prime_UTR |
| TTGCCTGTAGGTACTAATAA+TGG | 0.444030 | 4_1:+85686670 | Msa0580530:intron |
| AGTCATTGTGTTTGCGTCTA+GGG | 0.444874 | 4_1:-85688982 | None:intergenic |
| GATTCTGATTCCTCCTCTTA+CGG | 0.445513 | 4_1:+85685117 | Msa0580530:CDS |
| TAGTCATTGTGTTTGCGTCT+AGG | 0.448346 | 4_1:-85688983 | None:intergenic |
| TGGAGGATCATGATCCTGTA+TGG | 0.450396 | 4_1:+85689451 | Msa0580530:CDS |
| TCAGATGTGTTACTTCTCTC+TGG | 0.455505 | 4_1:-85687035 | None:intergenic |
| GAGAAATTTGACGGAGAAAA+GGG | 0.455838 | 4_1:+85691818 | Msa0580530:CDS |
| CACAAATTCAGCATGGTTCA+AGG | 0.455901 | 4_1:+85689628 | Msa0580530:CDS |
| ATCAAGACGTACACCAAGTT+GGG | 0.456649 | 4_1:+85692604 | Msa0580530:CDS |
| AATTATTCAAACCTCTGATC+GGG | 0.457842 | 4_1:-85693869 | None:intergenic |
| GGTAGACCTCCGGCCTTGCC+AGG | 0.458860 | 4_1:-85689408 | None:intergenic |
| CTGGAAGGGCTCCCTTATAC+AGG | 0.460763 | 4_1:+85687608 | Msa0580530:CDS |
| GTTCCTACAAAGCTTGCTGC+TGG | 0.461493 | 4_1:+85689020 | Msa0580530:CDS |
| GTAATTGGCGCCACCGTAAG+AGG | 0.465993 | 4_1:-85685130 | None:intergenic |
| TCCAAATTAACTGCAGCAAT+GGG | 0.470078 | 4_1:-85694285 | None:intergenic |
| TGAATAACTTGAGAATGCTT+GGG | 0.470800 | 4_1:+85692021 | Msa0580530:CDS |
| TGATGTAAAGTGCCAGCAAA+AGG | 0.472976 | 4_1:-85692563 | None:intergenic |
| AAACCGCGAGGCTCTGATGA+TGG | 0.474037 | 4_1:+85692629 | Msa0580530:CDS |
| TATTGACAGAACTATTGATC+AGG | 0.475763 | 4_1:+85689118 | Msa0580530:CDS |
| GAGTCAGGACTGCGGGAACT+GGG | 0.476609 | 4_1:+85691497 | Msa0580530:CDS |
| CAGGGGATTCCAAATCAACT+TGG | 0.480880 | 4_1:+85685364 | Msa0580530:CDS |
| ATCCAAATTAACTGCAGCAA+TGG | 0.482587 | 4_1:-85694286 | None:intergenic |
| ATGTGTTACTTCTCTCTGGT+TGG | 0.485539 | 4_1:-85687031 | None:intergenic |
| AAATATATAGCATCCATTGT+TGG | 0.485606 | 4_1:-85687001 | None:intergenic |
| GTCACATACTTCCTGTATAA+GGG | 0.487146 | 4_1:-85687619 | None:intergenic |
| TGGCGAAGCTCGAGCCATAC+AGG | 0.490327 | 4_1:-85689465 | None:intergenic |
| CGTCTTGATCTCATTGAATG+AGG | 0.494301 | 4_1:-85692590 | None:intergenic |
| GTTTATCCTGAGAAATTTGA+CGG | 0.499699 | 4_1:+85691809 | Msa0580530:CDS |
| CACGCAGTGATTCGGTGCTT+AGG | 0.499930 | 4_1:+85693782 | Msa0580530:intron |
| GTCAATAATGAGCAACTCGC+AGG | 0.502476 | 4_1:-85689102 | None:intergenic |
| CTTGCCACAAGCTTACTAGA+AGG | 0.509619 | 4_1:+85693978 | Msa0580530:CDS |
| AAAGCTTGCTGCTGGAGTCT+GGG | 0.510328 | 4_1:+85689028 | Msa0580530:CDS |
| TGACATATTCTGCATGAACT+AGG | 0.512838 | 4_1:+85694347 | Msa0580530:three_prime_UTR |
| CGACAAAACTAACCTCTACA+TGG | 0.514875 | 4_1:-85690569 | None:intergenic |
| CTCTGGAAATAGGTGAGCTA+AGG | 0.517467 | 4_1:-85687735 | None:intergenic |
| GCTCTGATGATGGGTATTCA+AGG | 0.518562 | 4_1:+85692639 | Msa0580530:CDS |
| TTTATCAGACATGGCTGGAA+GGG | 0.518629 | 4_1:+85687594 | Msa0580530:CDS |
| AAATTATTCAAACCTCTGAT+CGG | 0.523929 | 4_1:-85693870 | None:intergenic |
| CTGCAAGGATAGAACGTCCT+GGG | 0.524780 | 4_1:+85692138 | Msa0580530:CDS |
| AAACAAGATCTTGCTCCACC+TGG | 0.525352 | 4_1:-85691520 | None:intergenic |
| AACAAGGGACTTACAGAAGA+TGG | 0.525806 | 4_1:+85690500 | Msa0580530:CDS |
| TCTAGTGATTTCAAGAAGAT+GGG | 0.526090 | 4_1:+85693811 | Msa0580530:CDS |
| GTTTGATATCCAGAAGGTAA+AGG | 0.529190 | 4_1:+85692091 | Msa0580530:CDS |
| CATTAGGGAGTCAGGACTGC+GGG | 0.533800 | 4_1:+85691490 | Msa0580530:CDS |
| CATGAATTAACATACACGCT+TGG | 0.534031 | 4_1:+85694413 | Msa0580530:three_prime_UTR |
| GCGCTTGTTAATGATTCTTG+CGG | 0.538621 | 4_1:+85691784 | Msa0580530:CDS |
| TTTAAGGTTCCTGGCAAGGC+CGG | 0.541852 | 4_1:+85689399 | Msa0580530:intron |
| CGGTGGCGCAACCCGATCAG+AGG | 0.552061 | 4_1:+85693858 | Msa0580530:CDS |
| AACCGCGAGGCTCTGATGAT+GGG | 0.553335 | 4_1:+85692630 | Msa0580530:CDS |
| AGAATATGTCATCAAGTGAC+TGG | 0.554525 | 4_1:-85694335 | None:intergenic |
| AAGGTTCCTGGCAAGGCCGG+AGG | 0.557439 | 4_1:+85689402 | Msa0580530:intron |
| AATGAAGAGAATAATCGTAA+AGG | 0.560472 | 4_1:+85688758 | Msa0580530:CDS |
| GCTGCAAGGATAGAACGTCC+TGG | 0.561595 | 4_1:+85692137 | Msa0580530:CDS |
| AAGGCAACCGTTACCAACAA+TGG | 0.561902 | 4_1:+85686988 | Msa0580530:CDS |
| TTTGGATATTCAACTCCTTG+TGG | 0.561957 | 4_1:+85694302 | Msa0580530:three_prime_UTR |
| TCAATTTGTTCGCTGTATTG+TGG | 0.564959 | 4_1:-85690534 | None:intergenic |
| GATCAAGACGTACACCAAGT+TGG | 0.565011 | 4_1:+85692603 | Msa0580530:CDS |
| ATAGCATCCATTGTTGGTAA+CGG | 0.565143 | 4_1:-85686995 | None:intergenic |
| AACTCGCAGGTCTCAGTCTG+AGG | 0.566951 | 4_1:-85689089 | None:intergenic |
| CTTGGCAGCACGAAAGCGGA+TGG | 0.567144 | 4_1:-85688958 | None:intergenic |
| TGGACATTAGAAAAGGTCTG+AGG | 0.569327 | 4_1:+85687767 | Msa0580530:CDS |
| GGACATTAGAAAAGGTCTGA+GGG | 0.574848 | 4_1:+85687768 | Msa0580530:CDS |
| AATACCGTGATGAATTGTGC+AGG | 0.575005 | 4_1:-85694043 | None:intergenic |
| TCTGATTCCTCCTCTTACGG+TGG | 0.583008 | 4_1:+85685120 | Msa0580530:CDS |
| AAAGGGTCAGAATTTGATGA+AGG | 0.585880 | 4_1:+85691835 | Msa0580530:CDS |
| AATGTCTAACTCATGCAAGA+TGG | 0.586916 | 4_1:+85686712 | Msa0580530:CDS |
| GCAGCACGAAAGCGGATGGA+AGG | 0.590832 | 4_1:-85688954 | None:intergenic |
| ACTGCGGGAACTGGGCCAGG+TGG | 0.591719 | 4_1:+85691505 | Msa0580530:CDS |
| AGTCTGAGGAAAATTAGGTA+TGG | 0.591962 | 4_1:-85689075 | None:intergenic |
| GATTATTACACGAAATGCTA+AGG | 0.597429 | 4_1:+85685331 | Msa0580530:CDS |
| TGCCAGCAAAAGGTGAGCTG+TGG | 0.599301 | 4_1:-85692553 | None:intergenic |
| TCAGCCTTCTAGTAAGCTTG+TGG | 0.601262 | 4_1:-85693982 | None:intergenic |
| GGATTCCAAATCAACTTGGA+AGG | 0.607966 | 4_1:+85685368 | Msa0580530:CDS |
| CTATTTGTATTCATTGTCGG+TGG | 0.608557 | 4_1:+85693841 | Msa0580530:CDS |
| TGTTGCATGTTTGAATGCAA+TGG | 0.613656 | 4_1:+85688781 | Msa0580530:CDS |
| AGAGAGCATCATGTCTATGT+CGG | 0.615188 | 4_1:+85685095 | Msa0580530:exon |
| CAAACTCTCCCTCCATGTAG+AGG | 0.618973 | 4_1:+85690557 | Msa0580530:CDS |
| GGGACTTGGCAGCACGAAAG+CGG | 0.620933 | 4_1:-85688962 | None:intergenic |
| CTTACATGAAACACCTTCGT+CGG | 0.627545 | 4_1:-85686744 | None:intergenic |
| CAATGAATACAAATAGTCGT+TGG | 0.627844 | 4_1:-85693834 | None:intergenic |
| GAGCTGTGGAAAGTTGCACT+TGG | 0.632632 | 4_1:-85692539 | None:intergenic |
| AAAACTAACCTCTACATGGA+GGG | 0.632717 | 4_1:-85690565 | None:intergenic |
| TCTTAAGTTTGATATCCAGA+AGG | 0.643053 | 4_1:+85692085 | Msa0580530:CDS |
| GAGAAATCAACTGTCTAAGG+AGG | 0.645035 | 4_1:+85692496 | Msa0580530:CDS |
| GGTAGCACGGTTAACAGATG+AGG | 0.645727 | 4_1:+85691986 | Msa0580530:intron |
| TCATGATTTGCTGAATATGG+AGG | 0.647982 | 4_1:+85689274 | Msa0580530:CDS |
| CTACATCAGCAATATGAGCA+TGG | 0.648526 | 4_1:-85689485 | None:intergenic |
| GCACTTGGATCATTCAAACA+TGG | 0.648843 | 4_1:-85692524 | None:intergenic |
| TTGCTCCTGTAATACATGAG+TGG | 0.652791 | 4_1:+85689234 | Msa0580530:CDS |
| GAATAACTTGAGAATGCTTG+GGG | 0.654755 | 4_1:+85692022 | Msa0580530:CDS |
| ATTGGCGCCACCGTAAGAGG+AGG | 0.656163 | 4_1:-85685127 | None:intergenic |
| TCGATTAGGTGCATTAAGAG+AGG | 0.657496 | 4_1:+85687798 | Msa0580530:CDS |
| TCATCCACTCGTCACATATG+CGG | 0.661454 | 4_1:-85692445 | None:intergenic |
| TATGTCATCAAGTGACTGGG+TGG | 0.662591 | 4_1:-85694331 | None:intergenic |
| CATGATTTGCTGAATATGGA+GGG | 0.667358 | 4_1:+85689275 | Msa0580530:CDS |
| GCTTTGTAGGAACAAGATCA+CGG | 0.669039 | 4_1:-85689010 | None:intergenic |
| ATTCAGCAAATCATGACACA+TGG | 0.674046 | 4_1:-85689267 | None:intergenic |
| ACTGGGTGGAACCAGCCACA+AGG | 0.676280 | 4_1:-85694317 | None:intergenic |
| ATGGCTGATATCACCGACGA+AGG | 0.680593 | 4_1:+85686731 | Msa0580530:CDS |
| GACAATGTCAGGCTAGTGAA+CGG | 0.683507 | 4_1:+85689562 | Msa0580530:intron |
| AAAGCTGCACAAATTCAGCA+TGG | 0.683869 | 4_1:+85689621 | Msa0580530:CDS |
| ATAGCCGCATATGTGACGAG+TGG | 0.685874 | 4_1:+85692441 | Msa0580530:CDS |
| TGCAAGGATAGAACGTCCTG+GGG | 0.686134 | 4_1:+85692139 | Msa0580530:CDS |
| GAATATGTCATCAAGTGACT+GGG | 0.689242 | 4_1:-85694334 | None:intergenic |
| TCATTAGGGAGTCAGGACTG+CGG | 0.691345 | 4_1:+85691489 | Msa0580530:CDS |
| TGATCCTGCACAATTCATCA+CGG | 0.693413 | 4_1:+85694039 | Msa0580530:CDS |
| CAAAACTAACCTCTACATGG+AGG | 0.693964 | 4_1:-85690566 | None:intergenic |
| GTAGCAGTGAAATGTCAACA+AGG | 0.703273 | 4_1:+85690484 | Msa0580530:CDS |
| TTGAAGACATACACAAACGA+AGG | 0.709550 | 4_1:+85686969 | Msa0580530:CDS |
| TAGCAGTGAAATGTCAACAA+GGG | 0.710043 | 4_1:+85690485 | Msa0580530:CDS |
| TACCCATCATCAGAGCCTCG+CGG | 0.738058 | 4_1:-85692632 | None:intergenic |
| CCAAGTTGGGCAAAACCGCG+AGG | 0.739809 | 4_1:+85692617 | Msa0580530:CDS |
| AATAACTTGAGAATGCTTGG+GGG | 0.791847 | 4_1:+85692023 | Msa0580530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTATTTATTTAAAA+TGG | + | chr4_1:85689742-85689761 | Msa0580530:intron | 0.0% |
| !!! | ATTTTCTATTGTTAAAATTA+AGG | + | chr4_1:85685778-85685797 | Msa0580530:intron | 10.0% |
| !!! | TAATTAATTTTATTCCTTTT+TGG | + | chr4_1:85688017-85688036 | Msa0580530:intron | 10.0% |
| !!! | TTTAAAAAAAAGAGTATAAT+TGG | + | chr4_1:85691176-85691195 | Msa0580530:intron | 10.0% |
| !!! | ATAACTTAAGATTTTAAAAT+AGG | - | chr4_1:85691413-85691432 | None:intergenic | 10.0% |
| !!! | AAATTTTTATATTTTCTTGT+CGG | + | chr4_1:85693759-85693778 | Msa0580530:intron | 10.0% |
| !!! | AATAATTTTTCCAATAAATT+GGG | + | chr4_1:85693885-85693904 | Msa0580530:intron | 10.0% |
| !! | AATTTCGAAATTGAATAAAT+TGG | - | chr4_1:85685985-85686004 | None:intergenic | 15.0% |
| !! | AATTAACACATCTATTATTA+AGG | + | chr4_1:85686821-85686840 | Msa0580530:intron | 15.0% |
| !! | AAATTACTTCATACATTTAT+TGG | - | chr4_1:85687176-85687195 | None:intergenic | 15.0% |
| !!! | TTTTAAGTTTTGAATATCAA+AGG | + | chr4_1:85687194-85687213 | Msa0580530:intron | 15.0% |
| !!! | TTTAAGTTTTGAATATCAAA+GGG | + | chr4_1:85687195-85687214 | Msa0580530:intron | 15.0% |
| !! | AAATTTATTAAGAACCAAAA+AGG | - | chr4_1:85688034-85688053 | None:intergenic | 15.0% |
| !!! | AAACACTAATTTGTAATTAT+AGG | - | chr4_1:85690203-85690222 | None:intergenic | 15.0% |
| !! | GAATATGTTGAAATTATTAT+GGG | - | chr4_1:85690313-85690332 | None:intergenic | 15.0% |
| !! | TGAATATGTTGAAATTATTA+TGG | - | chr4_1:85690314-85690333 | None:intergenic | 15.0% |
| !! | ATATATTTAAGAATGTTAGA+TGG | + | chr4_1:85690853-85690872 | Msa0580530:intron | 15.0% |
| !! | TTAATTGTGAAAAAGAAATA+AGG | - | chr4_1:85691032-85691051 | None:intergenic | 15.0% |
| !! | TTAAGATTAGAGTATAATTA+AGG | + | chr4_1:85691048-85691067 | Msa0580530:intron | 15.0% |
| !! | TAAGATTAGAGTATAATTAA+GGG | + | chr4_1:85691049-85691068 | Msa0580530:intron | 15.0% |
| !!! | TTACACTTTTTTAAATTGTA+GGG | - | chr4_1:85691240-85691259 | None:intergenic | 15.0% |
| !!! | TTTACACTTTTTTAAATTGT+AGG | - | chr4_1:85691241-85691260 | None:intergenic | 15.0% |
| !!! | ACAATTTAAAAAAGTGTAAA+TGG | + | chr4_1:85691241-85691260 | Msa0580530:intron | 15.0% |
| !!! | CAATTTAAAAAAGTGTAAAT+GGG | + | chr4_1:85691242-85691261 | Msa0580530:intron | 15.0% |
| !! | AAAAATTAACAGTATCATTA+GGG | + | chr4_1:85691475-85691494 | Msa0580530:CDS | 15.0% |
| !! | AAGTAAGATATTCTTAATAT+GGG | + | chr4_1:85691591-85691610 | Msa0580530:intron | 15.0% |
| !! | CATGTATGAAATTTAATATA+TGG | - | chr4_1:85691724-85691743 | None:intergenic | 15.0% |
| !! | AAATTTAATTGAAGTTAGAA+TGG | + | chr4_1:85693472-85693491 | Msa0580530:intron | 15.0% |
| !!! | GAATAATTTTTCCAATAAAT+TGG | + | chr4_1:85693884-85693903 | Msa0580530:intron | 15.0% |
| !! | GAAAACTAAATAAATTATTC+TGG | - | chr4_1:85694393-85694412 | None:intergenic | 15.0% |
| !! | ATAATTATTCAGCTTTACTT+TGG | + | chr4_1:85685541-85685560 | Msa0580530:intron | 20.0% |
| !!! | AATATAAACTTTGACTTGTA+TGG | + | chr4_1:85686372-85686391 | Msa0580530:intron | 20.0% |
| !! | AAAGGAAATAGAACTAAAAA+AGG | - | chr4_1:85686915-85686934 | None:intergenic | 20.0% |
| !!! | TTTTAGTTCTATTTCCTTTA+TGG | + | chr4_1:85686916-85686935 | Msa0580530:intron | 20.0% |
| !!! | ATTCCAAAATGTTTTGTAAA+CGG | - | chr4_1:85687129-85687148 | None:intergenic | 20.0% |
| !! | AACATAAGGTGAAAAATAAA+AGG | - | chr4_1:85687277-85687296 | None:intergenic | 20.0% |
| !!! | TAACATGATAATGAATTACA+TGG | + | chr4_1:85687380-85687399 | Msa0580530:intron | 20.0% |
| !!! | ATAATTATACCATAACCTTT+TGG | + | chr4_1:85687455-85687474 | Msa0580530:intron | 20.0% |
| !!! | AATTATGTTTTTATCAGACA+TGG | + | chr4_1:85687585-85687604 | Msa0580530:CDS | 20.0% |
| !!! | TTTTTTTTTTCTCTTCTTGT+AGG | + | chr4_1:85687701-85687720 | Msa0580530:intron | 20.0% |
| !!! | TTTTTTTTTCTCTTCTTGTA+GGG | + | chr4_1:85687702-85687721 | Msa0580530:intron | 20.0% |
| !!! | AATATTTTAGTTATTGTGTG+TGG | - | chr4_1:85688451-85688470 | None:intergenic | 20.0% |
| !! | ACATATTTAGTATCTTTCAA+GGG | - | chr4_1:85688582-85688601 | None:intergenic | 20.0% |
| !! | TACATATTTAGTATCTTTCA+AGG | - | chr4_1:85688583-85688602 | None:intergenic | 20.0% |
| !!! | ATCTAGTGTTTGTTTTTTTA+AGG | + | chr4_1:85689383-85689402 | Msa0580530:intron | 20.0% |
| !! | ACTTTGAATATATTTAGTGA+TGG | + | chr4_1:85689915-85689934 | Msa0580530:intron | 20.0% |
| !! | CTTTGAATATATTTAGTGAT+GGG | + | chr4_1:85689916-85689935 | Msa0580530:intron | 20.0% |
| !! | TTATTATATTCTAACAGAAC+AGG | - | chr4_1:85690002-85690021 | None:intergenic | 20.0% |
| !! | CTATATATGTTGTGAATATT+TGG | + | chr4_1:85690336-85690355 | Msa0580530:intron | 20.0% |
| !! | AAGATAAAATTAGTTGTATC+AGG | - | chr4_1:85690604-85690623 | None:intergenic | 20.0% |
| !! | CTTAAATATATAAAACACTC+AGG | - | chr4_1:85690844-85690863 | None:intergenic | 20.0% |
| !! | AATAAGTAAAATAGAACATG+TGG | + | chr4_1:85690895-85690914 | Msa0580530:intron | 20.0% |
| !! | ATAAGTAAAATAGAACATGT+GGG | + | chr4_1:85690896-85690915 | Msa0580530:intron | 20.0% |
| !!! | AGTTTTTCTTTTTAAACCAT+GGG | - | chr4_1:85691269-85691288 | None:intergenic | 20.0% |
| !! | AAAGAAAAACTGAAATTCAA+CGG | + | chr4_1:85691278-85691297 | Msa0580530:intron | 20.0% |
| !! | ACAAAACAATAGTGAATTTA+GGG | - | chr4_1:85691307-85691326 | None:intergenic | 20.0% |
| !! | AACAAAACAATAGTGAATTT+AGG | - | chr4_1:85691308-85691327 | None:intergenic | 20.0% |
| !!! | TATACAAGCTTTATATATGA+TGG | + | chr4_1:85691430-85691449 | Msa0580530:intron | 20.0% |
| !! | GAAAAATTAACAGTATCATT+AGG | + | chr4_1:85691474-85691493 | Msa0580530:CDS | 20.0% |
| !! | GAAGTAAGATATTCTTAATA+TGG | + | chr4_1:85691590-85691609 | Msa0580530:intron | 20.0% |
| !!! | TTTTAACATGTACATTGATT+AGG | - | chr4_1:85691640-85691659 | None:intergenic | 20.0% |
| !! | TTATTCATCATATGGAAAAA+CGG | - | chr4_1:85692365-85692384 | None:intergenic | 20.0% |
| !! | ACTTGAAATTATTCATCATA+TGG | - | chr4_1:85692373-85692392 | None:intergenic | 20.0% |
| !! | TTAACTAGAAAGTAATTTCA+AGG | + | chr4_1:85693283-85693302 | Msa0580530:intron | 20.0% |
| !! | TAACTAGAAAGTAATTTCAA+GGG | + | chr4_1:85693284-85693303 | Msa0580530:intron | 20.0% |
| !!! | GAATTTTCTTCGTATTAAAT+AGG | + | chr4_1:85693310-85693329 | Msa0580530:intron | 20.0% |
| !!! | TGAATGCATGTTATTTTTTA+AGG | + | chr4_1:85693680-85693699 | Msa0580530:intron | 20.0% |
| !!! | AAAAATTTGTTTGCAACTAA+GGG | - | chr4_1:85693747-85693766 | None:intergenic | 20.0% |
| !!! | TAAAAATTTGTTTGCAACTA+AGG | - | chr4_1:85693748-85693767 | None:intergenic | 20.0% |
| ! | AAAAAGTGATCAAAACAAAG+AGG | + | chr4_1:85685048-85685067 | Msa0580530:five_prime_UTR | 25.0% |
| !!! | TTGCTTGAAATTTTGGTAAT+TGG | - | chr4_1:85685148-85685167 | None:intergenic | 25.0% |
| !!! | GTGTAATTTGCTTGAAATTT+TGG | - | chr4_1:85685155-85685174 | None:intergenic | 25.0% |
| !!! | TATGATGATGATATGTTTTC+AGG | + | chr4_1:85685309-85685328 | Msa0580530:intron | 25.0% |
| !! | TACTTTGGATATCTAGAATT+AGG | + | chr4_1:85685556-85685575 | Msa0580530:intron | 25.0% |
| ! | ATACTAAATGTGAAACAAAC+AGG | - | chr4_1:85685587-85685606 | None:intergenic | 25.0% |
| ! | ACTTATGATTTATACACTCA+AGG | + | chr4_1:85685671-85685690 | Msa0580530:intron | 25.0% |
| ! | CTCATATGTAAAGTATGTTT+CGG | - | chr4_1:85686554-85686573 | None:intergenic | 25.0% |
| !! | TCCTTTATGGTTTGATATTT+TGG | + | chr4_1:85686929-85686948 | Msa0580530:intron | 25.0% |
| ! | ACCAAAATATCAAACCATAA+AGG | - | chr4_1:85686933-85686952 | None:intergenic | 25.0% |
| ! | AAATATATAGCATCCATTGT+TGG | - | chr4_1:85687004-85687023 | None:intergenic | 25.0% |
| ! | CATATTTGGAAGTAAACATA+AGG | - | chr4_1:85687291-85687310 | None:intergenic | 25.0% |
| ! | TACAAATCTCATGTCATATT+TGG | - | chr4_1:85687305-85687324 | None:intergenic | 25.0% |
| ! | GTTATTTGTAGAGAATAGAA+AGG | - | chr4_1:85687364-85687383 | None:intergenic | 25.0% |
| !! | GAAAATATTTTACAGCCAAA+AGG | - | chr4_1:85687473-85687492 | None:intergenic | 25.0% |
| ! | GATGAGAAAACAACTAAATA+GGG | - | chr4_1:85687549-85687568 | None:intergenic | 25.0% |
| ! | TGATGAGAAAACAACTAAAT+AGG | - | chr4_1:85687550-85687569 | None:intergenic | 25.0% |
| ! | ACACACATAAGATACTATAA+TGG | - | chr4_1:85687647-85687666 | None:intergenic | 25.0% |
| !! | AAAATAAATAAGTTGAAGCC+AGG | - | chr4_1:85687677-85687696 | None:intergenic | 25.0% |
| !! | AAAACTAATTCTCTGGAAAT+AGG | - | chr4_1:85687748-85687767 | None:intergenic | 25.0% |
| !!! | TATTTCCAGAGAATTAGTTT+TGG | + | chr4_1:85687747-85687766 | Msa0580530:CDS | 25.0% |
| !!! | TTAGTTTTGGACATTAGAAA+AGG | + | chr4_1:85687760-85687779 | Msa0580530:CDS | 25.0% |
| ! | AAACTGTTGCATTAAAAGTA+TGG | - | chr4_1:85687866-85687885 | None:intergenic | 25.0% |
| ! | ATTATAGTCATAATGAACGA+AGG | - | chr4_1:85688001-85688020 | None:intergenic | 25.0% |
| !! | TTTAAGCCTTCTTTTGTATA+TGG | - | chr4_1:85688138-85688157 | None:intergenic | 25.0% |
| ! | CAAAAATATGCAATTAGGTA+TGG | - | chr4_1:85688186-85688205 | None:intergenic | 25.0% |
| !!! | CTAATTGCATATTTTTGAGT+CGG | + | chr4_1:85688189-85688208 | Msa0580530:intron | 25.0% |
| !!! | TAATTGCATATTTTTGAGTC+GGG | + | chr4_1:85688190-85688209 | Msa0580530:intron | 25.0% |
| !!! | CAATTTTGATTATTCATGTG+CGG | + | chr4_1:85688318-85688337 | Msa0580530:intron | 25.0% |
| ! | AATCGGGAATTTAATATTAG+CGG | + | chr4_1:85688347-85688366 | Msa0580530:intron | 25.0% |
| ! | CACTTTATATCTTTGGTTAT+TGG | - | chr4_1:85688374-85688393 | None:intergenic | 25.0% |
| ! | AACCAAAGATATAAAGTGAA+AGG | + | chr4_1:85688376-85688395 | Msa0580530:intron | 25.0% |
| ! | AATGAAGAGAATAATCGTAA+AGG | + | chr4_1:85688758-85688777 | Msa0580530:CDS | 25.0% |
| !! | TGAAGCATGTAATATGTTTT+AGG | + | chr4_1:85688926-85688945 | Msa0580530:intron | 25.0% |
| !! | AATAACCAACAAATTTTCCA+AGG | - | chr4_1:85689147-85689166 | None:intergenic | 25.0% |
| ! | AAAAAACAAACACTAGATTC+AGG | - | chr4_1:85689381-85689400 | None:intergenic | 25.0% |
| !!! | AATATCAAAAGGTATTCACA+TGG | - | chr4_1:85689539-85689558 | None:intergenic | 25.0% |
| ! | ACATTGTCATCAATATCAAA+AGG | - | chr4_1:85689550-85689569 | None:intergenic | 25.0% |
| ! | TGAATTTAGGTCAAATCATA+GGG | - | chr4_1:85689782-85689801 | None:intergenic | 25.0% |
| ! | ATGAATTTAGGTCAAATCAT+AGG | - | chr4_1:85689783-85689802 | None:intergenic | 25.0% |
| !!! | AGTATTGATATTTGTTCCAT+TGG | + | chr4_1:85689965-85689984 | Msa0580530:intron | 25.0% |
| !!! | AGTGTTTTAGATTATCTCTT+AGG | + | chr4_1:85690093-85690112 | Msa0580530:intron | 25.0% |
| !!! | TTTGGCCTTTTCATAATTTA+AGG | + | chr4_1:85690354-85690373 | Msa0580530:intron | 25.0% |
| ! | AGCTTCCTTAAATTATGAAA+AGG | - | chr4_1:85690362-85690381 | None:intergenic | 25.0% |
| ! | CTTAAAATGATAACACGATA+TGG | + | chr4_1:85690624-85690643 | Msa0580530:intron | 25.0% |
| ! | TGTACTATCTTACTGTAATA+TGG | + | chr4_1:85690661-85690680 | Msa0580530:intron | 25.0% |
| !!! | GTTCAGTTTTATTAAAAAGC+AGG | - | chr4_1:85690734-85690753 | None:intergenic | 25.0% |
| ! | GAGTATAATTAAGGGATATA+AGG | + | chr4_1:85691057-85691076 | Msa0580530:intron | 25.0% |
| ! | ATAATTAAGGGATATAAGGT+TGG | + | chr4_1:85691061-85691080 | Msa0580530:intron | 25.0% |
| ! | AAATGTTAGTGTTATGTTGT+AGG | - | chr4_1:85691152-85691171 | None:intergenic | 25.0% |
| !! | CAGTTTTTCTTTTTAAACCA+TGG | - | chr4_1:85691270-85691289 | None:intergenic | 25.0% |
| !! | TAGTTGCAAAGAATTTTCAA+CGG | - | chr4_1:85691354-85691373 | None:intergenic | 25.0% |
| ! | TGAAAATTCTTTGCAACTAT+AGG | + | chr4_1:85691355-85691374 | Msa0580530:intron | 25.0% |
| ! | GAAAATTCTTTGCAACTATA+GGG | + | chr4_1:85691356-85691375 | Msa0580530:intron | 25.0% |
| ! | AAAATTCTTTGCAACTATAG+GGG | + | chr4_1:85691357-85691376 | Msa0580530:intron | 25.0% |
| ! | TTCTTCAAAATGAACAGAAA+GGG | - | chr4_1:85691897-85691916 | None:intergenic | 25.0% |
| ! | ATTCTTCAAAATGAACAGAA+AGG | - | chr4_1:85691898-85691917 | None:intergenic | 25.0% |
| ! | AAATTGGATAACATCATTAC+AGG | - | chr4_1:85691945-85691964 | None:intergenic | 25.0% |
| ! | AGTACTTGAAACGTAAAAAT+TGG | - | chr4_1:85691961-85691980 | None:intergenic | 25.0% |
| !! | CTCTTTGAAAATATGTTATC+AGG | + | chr4_1:85692323-85692342 | Msa0580530:intron | 25.0% |
| ! | ATATGTTATCAGGCAAATAA+AGG | + | chr4_1:85692333-85692352 | Msa0580530:intron | 25.0% |
| ! | TATTCATCATATGGAAAAAC+GGG | - | chr4_1:85692364-85692383 | None:intergenic | 25.0% |
| !! | TAGATTACTGATTACTACTA+AGG | - | chr4_1:85692681-85692700 | None:intergenic | 25.0% |
| !! | CTTGTTATCAATTGTTTCAA+TGG | + | chr4_1:85692740-85692759 | Msa0580530:intron | 25.0% |
| ! | ATTAATCTCTAGATCTTTCA+TGG | - | chr4_1:85692843-85692862 | None:intergenic | 25.0% |
| ! | AAGATCTAGAGATTAATGAA+TGG | + | chr4_1:85692846-85692865 | Msa0580530:intron | 25.0% |
| ! | AGATCTAGAGATTAATGAAT+GGG | + | chr4_1:85692847-85692866 | Msa0580530:intron | 25.0% |
| ! | GAATAATCTAATCAGTAACT+AGG | - | chr4_1:85693011-85693030 | None:intergenic | 25.0% |
| !! | TTACTGATTAGATTATTCCA+TGG | + | chr4_1:85693013-85693032 | Msa0580530:intron | 25.0% |
| !!! | GATTTTTTTTTTTTGCTCCA+TGG | - | chr4_1:85693033-85693052 | None:intergenic | 25.0% |
| !!! | CTTTATTTTGGTCTAAAACA+AGG | - | chr4_1:85693205-85693224 | None:intergenic | 25.0% |
| !!! | CCACTAAAGATACTTTATTT+TGG | - | chr4_1:85693217-85693236 | None:intergenic | 25.0% |
| !! | CCAAAATAAAGTATCTTTAG+TGG | + | chr4_1:85693214-85693233 | Msa0580530:intron | 25.0% |
| !! | TTTTTCTGTTCTATTAAGCT+TGG | + | chr4_1:85693403-85693422 | Msa0580530:intron | 25.0% |
| !! | CTCTATCTTTGAACTTATTT+TGG | + | chr4_1:85693495-85693514 | Msa0580530:intron | 25.0% |
| ! | AAATTATTCAAACCTCTGAT+CGG | - | chr4_1:85693873-85693892 | None:intergenic | 25.0% |
| ! | ATTCACAAATCCCAATTTAT+TGG | - | chr4_1:85693898-85693917 | None:intergenic | 25.0% |
| !!! | CAATTATGGTTTTGTCAAAA+CGG | - | chr4_1:85694118-85694137 | None:intergenic | 25.0% |
| !! | AGCTTCACTATTTCAATTTT+CGG | - | chr4_1:85694441-85694460 | None:intergenic | 25.0% |
| GATTATTACACGAAATGCTA+AGG | + | chr4_1:85685331-85685350 | Msa0580530:CDS | 30.0% | |
| !! | CTAGTTTTCATTTCAAGTGT+TGG | + | chr4_1:85685445-85685464 | Msa0580530:intron | 30.0% |
| ! | TTTTACACATACAACCAATG+AGG | - | chr4_1:85685484-85685503 | None:intergenic | 30.0% |
| AACCAGTACATATATCTAGA+GGG | - | chr4_1:85686196-85686215 | None:intergenic | 30.0% | |
| AAACCAGTACATATATCTAG+AGG | - | chr4_1:85686197-85686216 | None:intergenic | 30.0% | |
| ATGCTCTCTTAACATCAAAA+TGG | + | chr4_1:85686865-85686884 | Msa0580530:intron | 30.0% | |
| TGCTCTCTTAACATCAAAAT+GGG | + | chr4_1:85686866-85686885 | Msa0580530:intron | 30.0% | |
| ! | TCTTTTCTGTTCCTATTGTT+CGG | + | chr4_1:85687061-85687080 | Msa0580530:intron | 30.0% |
| !! | ATGCCGTTTACAAAACATTT+TGG | + | chr4_1:85687123-85687142 | Msa0580530:intron | 30.0% |
| TTATTGGCAACTAAGATACA+GGG | - | chr4_1:85687160-85687179 | None:intergenic | 30.0% | |
| TTTATTGGCAACTAAGATAC+AGG | - | chr4_1:85687161-85687180 | None:intergenic | 30.0% | |
| AAGAGAATTACGGATAAAGT+TGG | - | chr4_1:85687232-85687251 | None:intergenic | 30.0% | |
| CAGAAAGTCAAAGAGAATTA+CGG | - | chr4_1:85687242-85687261 | None:intergenic | 30.0% | |
| ! | ATTTTACAGCCAAAAGGTTA+TGG | - | chr4_1:85687467-85687486 | None:intergenic | 30.0% |
| AATGTCCAAAACTAATTCTC+TGG | - | chr4_1:85687755-85687774 | None:intergenic | 30.0% | |
| AATAAGGGGAAAATCACAAT+AGG | - | chr4_1:85687894-85687913 | None:intergenic | 30.0% | |
| ! | ATTGTGATTTTCCCCTTATT+TGG | + | chr4_1:85687894-85687913 | Msa0580530:intron | 30.0% |
| AATGAACGAAGGTAATATGA+CGG | - | chr4_1:85687990-85688009 | None:intergenic | 30.0% | |
| CGACTCAAAAATATGCAATT+AGG | - | chr4_1:85688191-85688210 | None:intergenic | 30.0% | |
| ATCAACAATAACATGCTTTC+TGG | - | chr4_1:85688273-85688292 | None:intergenic | 30.0% | |
| AAATTGCGAATTTGCATTGA+TGG | - | chr4_1:85688304-85688323 | None:intergenic | 30.0% | |
| ATCGGGAATTTAATATTAGC+GGG | + | chr4_1:85688348-85688367 | Msa0580530:intron | 30.0% | |
| AGCCTTTCACTTTATATCTT+TGG | - | chr4_1:85688381-85688400 | None:intergenic | 30.0% | |
| AGGTAGAATAATACGAAGTT+TGG | + | chr4_1:85688478-85688497 | Msa0580530:intron | 30.0% | |
| GGTAGAATAATACGAAGTTT+GGG | + | chr4_1:85688479-85688498 | Msa0580530:intron | 30.0% | |
| GTAGAATAATACGAAGTTTG+GGG | + | chr4_1:85688480-85688499 | Msa0580530:intron | 30.0% | |
| !! | TTTTTGGTCATATCAATGCA+GGG | + | chr4_1:85688692-85688711 | Msa0580530:intron | 30.0% |
| !! | AAATAATGAGAGAGCATTAG+AGG | + | chr4_1:85688724-85688743 | Msa0580530:CDS | 30.0% |
| ! | TTTGCTTCATTAAGAGTATG+TGG | + | chr4_1:85688824-85688843 | Msa0580530:intron | 30.0% |
| TATTGACAGAACTATTGATC+AGG | + | chr4_1:85689118-85689137 | Msa0580530:CDS | 30.0% | |
| !!! | GTTTGTTTTTTTAAGGTTCC+TGG | + | chr4_1:85689390-85689409 | Msa0580530:intron | 30.0% |
| ! | AAAAGAACTTCTTTTCTCTC+AGG | - | chr4_1:85689432-85689451 | None:intergenic | 30.0% |
| ! | TGAGAGAAAAGAAGTTCTTT+TGG | + | chr4_1:85689431-85689450 | Msa0580530:CDS | 30.0% |
| AAGTATAGGATAGTAAAAGC+AGG | - | chr4_1:85689513-85689532 | None:intergenic | 30.0% | |
| TATTCACATGGCTTAAGTAT+AGG | - | chr4_1:85689527-85689546 | None:intergenic | 30.0% | |
| ! | TTGATATTGATGACAATGTC+AGG | + | chr4_1:85689551-85689570 | Msa0580530:intron | 30.0% |
| GTGAGTAGTAGTAATCTTAT+GGG | + | chr4_1:85689650-85689669 | Msa0580530:intron | 30.0% | |
| TGAGTAGTAGTAATCTTATG+GGG | + | chr4_1:85689651-85689670 | Msa0580530:intron | 30.0% | |
| GATAACTAGTCACAGAAAAA+TGG | - | chr4_1:85689886-85689905 | None:intergenic | 30.0% | |
| !! | ATATATTTAGTGATGGGCTA+AGG | + | chr4_1:85689922-85689941 | Msa0580530:intron | 30.0% |
| !! | TATATTTAGTGATGGGCTAA+GGG | + | chr4_1:85689923-85689942 | Msa0580530:intron | 30.0% |
| TGGAAGCAATGATATTAAGT+GGG | - | chr4_1:85690777-85690796 | None:intergenic | 30.0% | |
| ATGGAAGCAATGATATTAAG+TGG | - | chr4_1:85690778-85690797 | None:intergenic | 30.0% | |
| TAAGAATGTTAGATGGCATT+TGG | + | chr4_1:85690860-85690879 | Msa0580530:intron | 30.0% | |
| AAATTCTTTGCAACTATAGG+GGG | + | chr4_1:85691358-85691377 | Msa0580530:intron | 30.0% | |
| GTTTATCCTGAGAAATTTGA+CGG | + | chr4_1:85691809-85691828 | Msa0580530:CDS | 30.0% | |
| ATAACATCATTACAGGTGAT+GGG | - | chr4_1:85691938-85691957 | None:intergenic | 30.0% | |
| !! | TTACGTTTCAAGTACTTTTC+AGG | + | chr4_1:85691965-85691984 | Msa0580530:intron | 30.0% |
| TGAATAACTTGAGAATGCTT+GGG | + | chr4_1:85692021-85692040 | Msa0580530:CDS | 30.0% | |
| TCTTAAGTTTGATATCCAGA+AGG | + | chr4_1:85692085-85692104 | Msa0580530:CDS | 30.0% | |
| TAGAAATTACCTTTACCTTC+TGG | - | chr4_1:85692103-85692122 | None:intergenic | 30.0% | |
| ATAACCTGTACCTCTATTAT+GGG | - | chr4_1:85692197-85692216 | None:intergenic | 30.0% | |
| ! | AGTGGATACATATTTTGTGT+GGG | - | chr4_1:85692245-85692264 | None:intergenic | 30.0% |
| ! | AAGTGGATACATATTTTGTG+TGG | - | chr4_1:85692246-85692265 | None:intergenic | 30.0% |
| CACAAAATATGTATCCACTT+AGG | + | chr4_1:85692246-85692265 | Msa0580530:intron | 30.0% | |
| ATTCATCATATGGAAAAACG+GGG | - | chr4_1:85692363-85692382 | None:intergenic | 30.0% | |
| CAATTGTTTCAATGGTTTAG+TGG | + | chr4_1:85692748-85692767 | Msa0580530:intron | 30.0% | |
| CTTTCATGGAATAAACTTCT+GGG | - | chr4_1:85692829-85692848 | None:intergenic | 30.0% | |
| TCTTTCATGGAATAAACTTC+TGG | - | chr4_1:85692830-85692849 | None:intergenic | 30.0% | |
| ! | AGAAAGACATGGTTTTTGAT+AGG | + | chr4_1:85692870-85692889 | Msa0580530:intron | 30.0% |
| AATCTAACAATTGCTTCTGA+TGG | + | chr4_1:85693056-85693075 | Msa0580530:intron | 30.0% | |
| ATCTAACAATTGCTTCTGAT+GGG | + | chr4_1:85693057-85693076 | Msa0580530:intron | 30.0% | |
| CTACTCTACTCATAAATGAA+GGG | - | chr4_1:85693123-85693142 | None:intergenic | 30.0% | |
| TCTACTCTACTCATAAATGA+AGG | - | chr4_1:85693124-85693143 | None:intergenic | 30.0% | |
| AGAGCAAAAGTTAATCTGAA+AGG | + | chr4_1:85693250-85693269 | Msa0580530:intron | 30.0% | |
| TAGAAAGTAATTTCAAGGGT+AGG | + | chr4_1:85693288-85693307 | Msa0580530:intron | 30.0% | |
| !!! | AACCACTTTTTGACAACTTT+TGG | - | chr4_1:85693349-85693368 | None:intergenic | 30.0% |
| CAGTTCACTACAAAATATCA+GGG | - | chr4_1:85693544-85693563 | None:intergenic | 30.0% | |
| ACAGTTCACTACAAAATATC+AGG | - | chr4_1:85693545-85693564 | None:intergenic | 30.0% | |
| GATATCAATAGAGTTACATG+CGG | - | chr4_1:85693642-85693661 | None:intergenic | 30.0% | |
| TTCTAGTGATTTCAAGAAGA+TGG | + | chr4_1:85693810-85693829 | Msa0580530:CDS | 30.0% | |
| TCTAGTGATTTCAAGAAGAT+GGG | + | chr4_1:85693811-85693830 | Msa0580530:CDS | 30.0% | |
| CAATGAATACAAATAGTCGT+TGG | - | chr4_1:85693837-85693856 | None:intergenic | 30.0% | |
| CGACTATTTGTATTCATTGT+CGG | + | chr4_1:85693838-85693857 | Msa0580530:CDS | 30.0% | |
| AATTATTCAAACCTCTGATC+GGG | - | chr4_1:85693872-85693891 | None:intergenic | 30.0% | |
| ! | CTTCTCGTTTTCTTATCATT+TGG | + | chr4_1:85693923-85693942 | Msa0580530:intron | 30.0% |
| ATGCTTTAATCTTCAGCTAA+GGG | + | chr4_1:85693955-85693974 | Msa0580530:intron | 30.0% | |
| CTGAATAGGGAAATTATTCT+AGG | + | chr4_1:85694001-85694020 | Msa0580530:CDS | 30.0% | |
| AAAACGGCTATTCCAAATTA+CGG | - | chr4_1:85694102-85694121 | None:intergenic | 30.0% | |
| AGAAAAATAGCACGCAATTA+TGG | - | chr4_1:85694132-85694151 | None:intergenic | 30.0% | |
| AGAATAATTCCGAGTGCTTA+CGG | - | chr4_1:85685182-85685201 | None:intergenic | 35.0% | |
| ATGCTAAGGTCAACAAAAAC+AGG | + | chr4_1:85685345-85685364 | Msa0580530:CDS | 35.0% | |
| TGCTAAGGTCAACAAAAACA+GGG | + | chr4_1:85685346-85685365 | Msa0580530:CDS | 35.0% | |
| !! | ACATACCTTCCAAGTTGATT+TGG | - | chr4_1:85685376-85685395 | None:intergenic | 35.0% |
| TCAAGGATTTATCACACTGA+CGG | + | chr4_1:85685688-85685707 | Msa0580530:intron | 35.0% | |
| TTCCCTCTAGATATATGTAC+TGG | + | chr4_1:85686191-85686210 | Msa0580530:intron | 35.0% | |
| AAAACCGAATAATGCGAACT+GGG | + | chr4_1:85686299-85686318 | Msa0580530:intron | 35.0% | |
| CCATAATTATGCCACTAAGT+GGG | + | chr4_1:85686402-85686421 | Msa0580530:intron | 35.0% | |
| CATAATTATGCCACTAAGTG+GGG | + | chr4_1:85686403-85686422 | Msa0580530:intron | 35.0% | |
| TAGATATGCATGCATGTTTG+TGG | + | chr4_1:85686511-85686530 | Msa0580530:intron | 35.0% | |
| ACATATGAGTGAACTGTTGA+AGG | + | chr4_1:85686565-85686584 | Msa0580530:intron | 35.0% | |
| TTGCCTGTAGGTACTAATAA+TGG | + | chr4_1:85686670-85686689 | Msa0580530:intron | 35.0% | |
| TGTCCATTATTAGTACCTAC+AGG | - | chr4_1:85686676-85686695 | None:intergenic | 35.0% | |
| AATGTCTAACTCATGCAAGA+TGG | + | chr4_1:85686712-85686731 | Msa0580530:CDS | 35.0% | |
| ACATTGACAGTCACTAAAAC+TGG | - | chr4_1:85686789-85686808 | None:intergenic | 35.0% | |
| GCTCTCTTAACATCAAAATG+GGG | + | chr4_1:85686867-85686886 | Msa0580530:intron | 35.0% | |
| CTCTCTTAACATCAAAATGG+GGG | + | chr4_1:85686868-85686887 | Msa0580530:intron | 35.0% | |
| TCTCTTAACATCAAAATGGG+GGG | + | chr4_1:85686869-85686888 | Msa0580530:intron | 35.0% | |
| AAAAGGATGCCCAATAAATG+AGG | - | chr4_1:85686898-85686917 | None:intergenic | 35.0% | |
| !!! | TTTTGGTGCTTTTTTCGTAG+TGG | + | chr4_1:85686946-85686965 | Msa0580530:intron | 35.0% |
| TTGAAGACATACACAAACGA+AGG | + | chr4_1:85686969-85686988 | Msa0580530:CDS | 35.0% | |
| ! | ATAGCATCCATTGTTGGTAA+CGG | - | chr4_1:85686998-85687017 | None:intergenic | 35.0% |
| !! | ATGTTTTTATCAGACATGGC+TGG | + | chr4_1:85687589-85687608 | Msa0580530:CDS | 35.0% |
| GTCACATACTTCCTGTATAA+GGG | - | chr4_1:85687622-85687641 | None:intergenic | 35.0% | |
| CATGGTATCATCCAAATAAG+GGG | - | chr4_1:85687908-85687927 | None:intergenic | 35.0% | |
| GCATGGTATCATCCAAATAA+GGG | - | chr4_1:85687909-85687928 | None:intergenic | 35.0% | |
| TGCATGGTATCATCCAAATA+AGG | - | chr4_1:85687910-85687929 | None:intergenic | 35.0% | |
| TGATACCATGCAGATGAATT+TGG | + | chr4_1:85687918-85687937 | Msa0580530:intron | 35.0% | |
| ATACTCCAAATTCATCTGCA+TGG | - | chr4_1:85687926-85687945 | None:intergenic | 35.0% | |
| AAAGGATACAACCATATACC+TGG | - | chr4_1:85687963-85687982 | None:intergenic | 35.0% | |
| ! | AGGTAATATGACGGAAGAAA+AGG | - | chr4_1:85687981-85688000 | None:intergenic | 35.0% |
| ! | CCTTCTTTTGTATATGGAGA+AGG | - | chr4_1:85688132-85688151 | None:intergenic | 35.0% |
| CCTTCTCCATATACAAAAGA+AGG | + | chr4_1:85688129-85688148 | Msa0580530:intron | 35.0% | |
| ! | TGAGTTAGAAGCTTTGATGT+GGG | + | chr4_1:85688213-85688232 | Msa0580530:intron | 35.0% |
| !! | TTTTGATTATTCATGTGCGG+CGG | + | chr4_1:85688321-85688340 | Msa0580530:intron | 35.0% |
| !!! | GTTTTTGGTCATATCAATGC+AGG | + | chr4_1:85688691-85688710 | Msa0580530:intron | 35.0% |
| ! | AGAGCATTAGAGGATCTATT+TGG | + | chr4_1:85688734-85688753 | Msa0580530:CDS | 35.0% |
| GAGCATTAGAGGATCTATTT+GGG | + | chr4_1:85688735-85688754 | Msa0580530:CDS | 35.0% | |
| TGTTGCATGTTTGAATGCAA+TGG | + | chr4_1:85688781-85688800 | Msa0580530:CDS | 35.0% | |
| AGTCTGAGGAAAATTAGGTA+TGG | - | chr4_1:85689078-85689097 | None:intergenic | 35.0% | |
| AACTATTGATCAGGTTTCCT+TGG | + | chr4_1:85689127-85689146 | Msa0580530:intron | 35.0% | |
| GGTTTCCTTGGAAAATTTGT+TGG | + | chr4_1:85689139-85689158 | Msa0580530:intron | 35.0% | |
| TATGTCCACTCATGTATTAC+AGG | - | chr4_1:85689242-85689261 | None:intergenic | 35.0% | |
| ATTCAGCAAATCATGACACA+TGG | - | chr4_1:85689270-85689289 | None:intergenic | 35.0% | |
| !! | GTGTCATGATTTGCTGAATA+TGG | + | chr4_1:85689271-85689290 | Msa0580530:CDS | 35.0% |
| !! | TCATGATTTGCTGAATATGG+AGG | + | chr4_1:85689274-85689293 | Msa0580530:CDS | 35.0% |
| !! | CATGATTTGCTGAATATGGA+GGG | + | chr4_1:85689275-85689294 | Msa0580530:CDS | 35.0% |
| ! | CTTTCTCTCTCTGAGTTTTT+GGG | + | chr4_1:85689335-85689354 | Msa0580530:intron | 35.0% |
| !!! | TTTTTTTAAGGTTCCTGGCA+AGG | + | chr4_1:85689395-85689414 | Msa0580530:intron | 35.0% |
| ! | GAGAAAAGAAGTTCTTTTGG+AGG | + | chr4_1:85689434-85689453 | Msa0580530:CDS | 35.0% |
| GGTGAGTAGTAGTAATCTTA+TGG | + | chr4_1:85689649-85689668 | Msa0580530:intron | 35.0% | |
| CTTATGGGGATTTCAATTGA+TGG | + | chr4_1:85689665-85689684 | Msa0580530:intron | 35.0% | |
| ACAGGATTCAAATTGTCCAA+TGG | - | chr4_1:85689984-85690003 | None:intergenic | 35.0% | |
| ATGAGCTAAGAATAAGAGCT+TGG | - | chr4_1:85690280-85690299 | None:intergenic | 35.0% | |
| ! | AGCTTCGATTTGTAGTTTGA+TGG | + | chr4_1:85690378-85690397 | Msa0580530:intron | 35.0% |
| TAGCAGTGAAATGTCAACAA+GGG | + | chr4_1:85690485-85690504 | Msa0580530:CDS | 35.0% | |
| ! | TCAATTTGTTCGCTGTATTG+TGG | - | chr4_1:85690537-85690556 | None:intergenic | 35.0% |
| AAAACTAACCTCTACATGGA+GGG | - | chr4_1:85690568-85690587 | None:intergenic | 35.0% | |
| !!! | TGTGGGTTTTGTTCATGTTT+TGG | + | chr4_1:85690913-85690932 | Msa0580530:intron | 35.0% |
| ! | TAAGGGATATAAGGTTGGTT+TGG | + | chr4_1:85691066-85691085 | Msa0580530:intron | 35.0% |
| ! | TGTTAATTTTTCCTGCAAGC+TGG | - | chr4_1:85691466-85691485 | None:intergenic | 35.0% |
| !! | CAAGCGCAGTTTATTTTCAT+GGG | - | chr4_1:85691771-85691790 | None:intergenic | 35.0% |
| !! | ACAAGCGCAGTTTATTTTCA+TGG | - | chr4_1:85691772-85691791 | None:intergenic | 35.0% |
| ! | TTTTCTCCGTCAAATTTCTC+AGG | - | chr4_1:85691818-85691837 | None:intergenic | 35.0% |
| TGAGAAATTTGACGGAGAAA+AGG | + | chr4_1:85691817-85691836 | Msa0580530:CDS | 35.0% | |
| GAGAAATTTGACGGAGAAAA+GGG | + | chr4_1:85691818-85691837 | Msa0580530:CDS | 35.0% | |
| AAAGGGTCAGAATTTGATGA+AGG | + | chr4_1:85691835-85691854 | Msa0580530:CDS | 35.0% | |
| GATAACATCATTACAGGTGA+TGG | - | chr4_1:85691939-85691958 | None:intergenic | 35.0% | |
| GTGAATAACTTGAGAATGCT+TGG | + | chr4_1:85692020-85692039 | Msa0580530:CDS | 35.0% | |
| GAATAACTTGAGAATGCTTG+GGG | + | chr4_1:85692022-85692041 | Msa0580530:CDS | 35.0% | |
| AATAACTTGAGAATGCTTGG+GGG | + | chr4_1:85692023-85692042 | Msa0580530:CDS | 35.0% | |
| !!! | GTCAAACGTTTTTTGGTATC+TGG | - | chr4_1:85692053-85692072 | None:intergenic | 35.0% |
| GATACCAAAAAACGTTTGAC+TGG | + | chr4_1:85692053-85692072 | Msa0580530:CDS | 35.0% | |
| GTTTGATATCCAGAAGGTAA+AGG | + | chr4_1:85692091-85692110 | Msa0580530:CDS | 35.0% | |
| ! | ACGCTTTTATCCCATAATAG+AGG | + | chr4_1:85692184-85692203 | Msa0580530:CDS | 35.0% |
| ! | TTATCCCATAATAGAGGTAC+AGG | + | chr4_1:85692190-85692209 | Msa0580530:intron | 35.0% |
| CATAACCTGTACCTCTATTA+TGG | - | chr4_1:85692198-85692217 | None:intergenic | 35.0% | |
| TCTTGGTGAAATTTCCTAAG+TGG | - | chr4_1:85692263-85692282 | None:intergenic | 35.0% | |
| ! | ATGCGGCTATATAACTTTTG+AGG | - | chr4_1:85692431-85692450 | None:intergenic | 35.0% |
| AAGCACACGTTTCTAAATAG+TGG | - | chr4_1:85692787-85692806 | None:intergenic | 35.0% | |
| TAATGAATGGGAGAAAGACA+TGG | + | chr4_1:85692859-85692878 | Msa0580530:intron | 35.0% | |
| ! | TGGTTTTTGATAGGACACTA+TGG | + | chr4_1:85692879-85692898 | Msa0580530:intron | 35.0% |
| AAATCTTCCAAGAGTTTGAC+AGG | - | chr4_1:85692988-85693007 | None:intergenic | 35.0% | |
| GTCCAAAAGTTGTCAAAAAG+TGG | + | chr4_1:85693344-85693363 | Msa0580530:intron | 35.0% | |
| CTATTTGTATTCATTGTCGG+TGG | + | chr4_1:85693841-85693860 | Msa0580530:CDS | 35.0% | |
| GATGCTTTAATCTTCAGCTA+AGG | + | chr4_1:85693954-85693973 | Msa0580530:intron | 35.0% | |
| CGACTATTGTACATCATATC+TGG | - | chr4_1:85694209-85694228 | None:intergenic | 35.0% | |
| TCCAAATTAACTGCAGCAAT+GGG | - | chr4_1:85694288-85694307 | None:intergenic | 35.0% | |
| ATCCAAATTAACTGCAGCAA+TGG | - | chr4_1:85694289-85694308 | None:intergenic | 35.0% | |
| TTTGGATATTCAACTCCTTG+TGG | + | chr4_1:85694302-85694321 | Msa0580530:three_prime_UTR | 35.0% | |
| GAATATGTCATCAAGTGACT+GGG | - | chr4_1:85694337-85694356 | None:intergenic | 35.0% | |
| AGAATATGTCATCAAGTGAC+TGG | - | chr4_1:85694338-85694357 | None:intergenic | 35.0% | |
| TGACATATTCTGCATGAACT+AGG | + | chr4_1:85694347-85694366 | Msa0580530:three_prime_UTR | 35.0% | |
| CAAGCGTGTATGTTAATTCA+TGG | - | chr4_1:85694415-85694434 | None:intergenic | 35.0% | |
| CATGAATTAACATACACGCT+TGG | + | chr4_1:85694413-85694432 | Msa0580530:three_prime_UTR | 35.0% | |
| !! | AGAGAGCATCATGTCTATGT+CGG | + | chr4_1:85685095-85685114 | Msa0580530:exon | 40.0% |
| GATTCTGATTCCTCCTCTTA+CGG | + | chr4_1:85685117-85685136 | Msa0580530:CDS | 40.0% | |
| GCTAAGGTCAACAAAAACAG+GGG | + | chr4_1:85685347-85685366 | Msa0580530:CDS | 40.0% | |
| GGATTCCAAATCAACTTGGA+AGG | + | chr4_1:85685368-85685387 | Msa0580530:CDS | 40.0% | |
| GGTTTATGCACACTAAATGC+TGG | + | chr4_1:85686212-85686231 | Msa0580530:intron | 40.0% | |
| TATGCACACTAAATGCTGGT+AGG | + | chr4_1:85686216-85686235 | Msa0580530:intron | 40.0% | |
| !! | TGGTTTGCTTGCTCATCATA+AGG | - | chr4_1:85686280-85686299 | None:intergenic | 40.0% |
| ! | CAGTTCGCATTATTCGGTTT+TGG | - | chr4_1:85686300-85686319 | None:intergenic | 40.0% |
| CAAAACCGAATAATGCGAAC+TGG | + | chr4_1:85686298-85686317 | Msa0580530:intron | 40.0% | |
| ATAGCCCAGTTCGCATTATT+CGG | - | chr4_1:85686306-85686325 | None:intergenic | 40.0% | |
| GCCATAATTATGCCACTAAG+TGG | + | chr4_1:85686401-85686420 | Msa0580530:intron | 40.0% | |
| CCCACTTAGTGGCATAATTA+TGG | - | chr4_1:85686405-85686424 | None:intergenic | 40.0% | |
| CAACATGGATCAACATGTAG+CGG | - | chr4_1:85686430-85686449 | None:intergenic | 40.0% | |
| AAAGTATGTTTCGGCTACTC+TGG | - | chr4_1:85686545-85686564 | None:intergenic | 40.0% | |
| CTTACATGAAACACCTTCGT+CGG | - | chr4_1:85686747-85686766 | None:intergenic | 40.0% | |
| !! | ATGTGTTACTTCTCTCTGGT+TGG | - | chr4_1:85687034-85687053 | None:intergenic | 40.0% |
| !! | TCAGATGTGTTACTTCTCTC+TGG | - | chr4_1:85687038-85687057 | None:intergenic | 40.0% |
| !! | ACAGAAAAGTGCCGAACAAT+AGG | - | chr4_1:85687075-85687094 | None:intergenic | 40.0% |
| ! | TTTTATCAGACATGGCTGGA+AGG | + | chr4_1:85687593-85687612 | Msa0580530:CDS | 40.0% |
| TTTATCAGACATGGCTGGAA+GGG | + | chr4_1:85687594-85687613 | Msa0580530:CDS | 40.0% | |
| CGTCACATACTTCCTGTATA+AGG | - | chr4_1:85687623-85687642 | None:intergenic | 40.0% | |
| ! | CTTATGTGTGTCATTCATCC+TGG | + | chr4_1:85687656-85687675 | Msa0580530:intron | 40.0% |
| TGGACATTAGAAAAGGTCTG+AGG | + | chr4_1:85687767-85687786 | Msa0580530:CDS | 40.0% | |
| GGACATTAGAAAAGGTCTGA+GGG | + | chr4_1:85687768-85687787 | Msa0580530:CDS | 40.0% | |
| TCGATTAGGTGCATTAAGAG+AGG | + | chr4_1:85687798-85687817 | Msa0580530:CDS | 40.0% | |
| ! | GTATTTTGCCATAGATTGCC+AGG | + | chr4_1:85687942-85687961 | Msa0580530:CDS | 40.0% |
| ACCATATACCTGGCAATCTA+TGG | - | chr4_1:85687953-85687972 | None:intergenic | 40.0% | |
| ! | GTGAGTTAGAAGCTTTGATG+TGG | + | chr4_1:85688212-85688231 | Msa0580530:intron | 40.0% |
| TATAAAGTGAAAGGCTCGCT+AGG | + | chr4_1:85688385-85688404 | Msa0580530:intron | 40.0% | |
| ATAAAGTGAAAGGCTCGCTA+GGG | + | chr4_1:85688386-85688405 | Msa0580530:intron | 40.0% | |
| GTATAGTAAGTCTGTGGCTT+AGG | - | chr4_1:85688421-85688440 | None:intergenic | 40.0% | |
| ACAGACGTATAGTAAGTCTG+TGG | - | chr4_1:85688427-85688446 | None:intergenic | 40.0% | |
| GAATAATACGAAGTTTGGGG+TGG | + | chr4_1:85688483-85688502 | Msa0580530:intron | 40.0% | |
| AATAAGATACGCATGACCAC+AGG | - | chr4_1:85688519-85688538 | None:intergenic | 40.0% | |
| GTGGTCATGCGTATCTTATT+AGG | + | chr4_1:85688519-85688538 | Msa0580530:intron | 40.0% | |
| GTTAGTAACTAATCCTGCCA+TGG | + | chr4_1:85688636-85688655 | Msa0580530:intron | 40.0% | |
| GGTACAAACTAATGAGACCA+TGG | - | chr4_1:85688656-85688675 | None:intergenic | 40.0% | |
| ! | TAGTTTGTACCTTCAGCTTG+AGG | + | chr4_1:85688665-85688684 | Msa0580530:intron | 40.0% |
| AAAAACACACCTCAAGCTGA+AGG | - | chr4_1:85688677-85688696 | None:intergenic | 40.0% | |
| ! | TTCAGCTTGAGGTGTGTTTT+TGG | + | chr4_1:85688676-85688695 | Msa0580530:intron | 40.0% |
| AGTCATTGTGTTTGCGTCTA+GGG | - | chr4_1:85688985-85689004 | None:intergenic | 40.0% | |
| TAGTCATTGTGTTTGCGTCT+AGG | - | chr4_1:85688986-85689005 | None:intergenic | 40.0% | |
| GCTTTGTAGGAACAAGATCA+CGG | - | chr4_1:85689013-85689032 | None:intergenic | 40.0% | |
| GTCTCAGTCTGAGGAAAATT+AGG | - | chr4_1:85689083-85689102 | None:intergenic | 40.0% | |
| TTGCTCCTGTAATACATGAG+TGG | + | chr4_1:85689234-85689253 | Msa0580530:CDS | 40.0% | |
| CCAAAAACTCAGAGAGAGAA+AGG | - | chr4_1:85689337-85689356 | None:intergenic | 40.0% | |
| ! | CCTTTCTCTCTCTGAGTTTT+TGG | + | chr4_1:85689334-85689353 | Msa0580530:intron | 40.0% |
| CTACATCAGCAATATGAGCA+TGG | - | chr4_1:85689488-85689507 | None:intergenic | 40.0% | |
| CATGCTCATATTGCTGATGT+AGG | + | chr4_1:85689486-85689505 | Msa0580530:intron | 40.0% | |
| AAAGCTGCACAAATTCAGCA+TGG | + | chr4_1:85689621-85689640 | Msa0580530:CDS | 40.0% | |
| CACAAATTCAGCATGGTTCA+AGG | + | chr4_1:85689628-85689647 | Msa0580530:CDS | 40.0% | |
| AAAAATGGCTGGAAACACTC+GGG | - | chr4_1:85689871-85689890 | None:intergenic | 40.0% | |
| GAAAAATGGCTGGAAACACT+CGG | - | chr4_1:85689872-85689891 | None:intergenic | 40.0% | |
| ACTAGTCACAGAAAAATGGC+TGG | - | chr4_1:85689882-85689901 | None:intergenic | 40.0% | |
| CTAAGGGAACAAATCGTAGA+TGG | + | chr4_1:85689939-85689958 | Msa0580530:intron | 40.0% | |
| GTAGCAGTGAAATGTCAACA+AGG | + | chr4_1:85690484-85690503 | Msa0580530:CDS | 40.0% | |
| AACAAGGGACTTACAGAAGA+TGG | + | chr4_1:85690500-85690519 | Msa0580530:CDS | 40.0% | |
| CAAAACTAACCTCTACATGG+AGG | - | chr4_1:85690569-85690588 | None:intergenic | 40.0% | |
| CGACAAAACTAACCTCTACA+TGG | - | chr4_1:85690572-85690591 | None:intergenic | 40.0% | |
| ! | CCACTTCTTTTATTGCCTCT+GGG | + | chr4_1:85690689-85690708 | Msa0580530:intron | 40.0% |
| ATAAGGTAGCACTTGACATG+CGG | - | chr4_1:85691015-85691034 | None:intergenic | 40.0% | |
| AGTTAAGGAGTGGAGTGATA+AGG | + | chr4_1:85691106-85691125 | Msa0580530:intron | 40.0% | |
| ! | AAAAGTGTAAATGGGTCCCA+TGG | + | chr4_1:85691250-85691269 | Msa0580530:intron | 40.0% |
| ! | ACGGAGTCTTGTAAGCTATT+AGG | - | chr4_1:85691335-85691354 | None:intergenic | 40.0% |
| AACAGTATCATTAGGGAGTC+AGG | + | chr4_1:85691482-85691501 | Msa0580530:CDS | 40.0% | |
| !!! | GTGGAGCAAGATCTTGTTTT+TGG | + | chr4_1:85691524-85691543 | Msa0580530:CDS | 40.0% |
| ! | GCGCTTGTTAATGATTCTTG+CGG | + | chr4_1:85691784-85691803 | Msa0580530:CDS | 40.0% |
| !!! | CAAGTACTTTTCAGGTAGCA+CGG | + | chr4_1:85691973-85691992 | Msa0580530:intron | 40.0% |
| !!! | AGCACCAGTCAAACGTTTTT+TGG | - | chr4_1:85692060-85692079 | None:intergenic | 40.0% |
| AAACGTTTGACTGGTGCTTT+CGG | + | chr4_1:85692062-85692081 | Msa0580530:CDS | 40.0% | |
| AGGAAATTTCACCAAGACGA+TGG | + | chr4_1:85692266-85692285 | Msa0580530:intron | 40.0% | |
| GCAAAATAAAGCCATCGTCT+TGG | - | chr4_1:85692280-85692299 | None:intergenic | 40.0% | |
| ATCATATGGAAAAACGGGGT+TGG | - | chr4_1:85692359-85692378 | None:intergenic | 40.0% | |
| TGACGAGTGGATGAATATTC+AGG | + | chr4_1:85692454-85692473 | Msa0580530:CDS | 40.0% | |
| CACGAGAAATCAACTGTCTA+AGG | + | chr4_1:85692493-85692512 | Msa0580530:CDS | 40.0% | |
| GAGAAATCAACTGTCTAAGG+AGG | + | chr4_1:85692496-85692515 | Msa0580530:CDS | 40.0% | |
| GCACTTGGATCATTCAAACA+TGG | - | chr4_1:85692527-85692546 | None:intergenic | 40.0% | |
| ! | TGATGTAAAGTGCCAGCAAA+AGG | - | chr4_1:85692566-85692585 | None:intergenic | 40.0% |
| CGTCTTGATCTCATTGAATG+AGG | - | chr4_1:85692593-85692612 | None:intergenic | 40.0% | |
| ATCAAGACGTACACCAAGTT+GGG | + | chr4_1:85692604-85692623 | Msa0580530:CDS | 40.0% | |
| TGTTTCAATGGTTTAGTGGC+TGG | + | chr4_1:85692752-85692771 | Msa0580530:intron | 40.0% | |
| AAACGTGTGCTTCATTGTCT+GGG | + | chr4_1:85692795-85692814 | Msa0580530:intron | 40.0% | |
| ! | AAGCTTTATGCCACTAAGTG+GGG | - | chr4_1:85692928-85692947 | None:intergenic | 40.0% |
| ! | CAAGCTTTATGCCACTAAGT+GGG | - | chr4_1:85692929-85692948 | None:intergenic | 40.0% |
| TTACTGTCCTGTCAAACTCT+TGG | + | chr4_1:85692978-85692997 | Msa0580530:intron | 40.0% | |
| ACAATTGCTTCTGATGGGAT+CGG | + | chr4_1:85693062-85693081 | Msa0580530:intron | 40.0% | |
| ! | GACAACTTTTGGACAAGATG+AGG | - | chr4_1:85693338-85693357 | None:intergenic | 40.0% |
| AAATATCAGGGTCTGACTCA+AGG | - | chr4_1:85693532-85693551 | None:intergenic | 40.0% | |
| AGCTTACTAGAAGGCTGAAT+AGG | + | chr4_1:85693987-85694006 | Msa0580530:CDS | 40.0% | |
| GCTTACTAGAAGGCTGAATA+GGG | + | chr4_1:85693988-85694007 | Msa0580530:CDS | 40.0% | |
| TGATCCTGCACAATTCATCA+CGG | + | chr4_1:85694039-85694058 | Msa0580530:CDS | 40.0% | |
| AATACCGTGATGAATTGTGC+AGG | - | chr4_1:85694046-85694065 | None:intergenic | 40.0% | |
| TCCAAATTACGGCACACATT+CGG | - | chr4_1:85694091-85694110 | None:intergenic | 40.0% | |
| TCCCATTGCTGCAGTTAATT+TGG | + | chr4_1:85694284-85694303 | Msa0580530:three_prime_UTR | 40.0% | |
| CAGGGGATTCCAAATCAACT+TGG | + | chr4_1:85685364-85685383 | Msa0580530:CDS | 45.0% | |
| GCAAGTTGTCATTGCCTCAT+TGG | + | chr4_1:85685467-85685486 | Msa0580530:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr4_1:85686457-85686476 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr4_1:85686458-85686477 | None:intergenic | 45.0% |
| ! | TCAAGCCTTATCCCACTAAG+TGG | - | chr4_1:85686459-85686478 | None:intergenic | 45.0% |
| TTCATCGTTTGCTTGCCTGT+AGG | + | chr4_1:85686658-85686677 | Msa0580530:intron | 45.0% | |
| !! | CGACGAAGGTGTTTCATGTA+AGG | + | chr4_1:85686745-85686764 | Msa0580530:intron | 45.0% |
| AAGGCAACCGTTACCAACAA+TGG | + | chr4_1:85686988-85687007 | Msa0580530:CDS | 45.0% | |
| ! | CTCTGGAAATAGGTGAGCTA+AGG | - | chr4_1:85687738-85687757 | None:intergenic | 45.0% |
| GCCATAGATTGCCAGGTATA+TGG | + | chr4_1:85687949-85687968 | Msa0580530:intron | 45.0% | |
| TAAAGTGAAAGGCTCGCTAG+GGG | + | chr4_1:85688387-85688406 | Msa0580530:intron | 45.0% | |
| CAAACTAATGAGACCATGGC+AGG | - | chr4_1:85688652-85688671 | None:intergenic | 45.0% | |
| GTCAATAATGAGCAACTCGC+AGG | - | chr4_1:85689105-85689124 | None:intergenic | 45.0% | |
| ! | TTTTCTCTCAGGTAGACCTC+CGG | - | chr4_1:85689421-85689440 | None:intergenic | 45.0% |
| TGGAGGATCATGATCCTGTA+TGG | + | chr4_1:85689451-85689470 | Msa0580530:CDS | 45.0% | |
| GACAATGTCAGGCTAGTGAA+CGG | + | chr4_1:85689562-85689581 | Msa0580530:intron | 45.0% | |
| CTAAATTCATTCCCCGCTGT+GGG | + | chr4_1:85689793-85689812 | Msa0580530:intron | 45.0% | |
| TTGCCACCATGTGGTGTATT+CGG | + | chr4_1:85689830-85689849 | Msa0580530:intron | 45.0% | |
| AGATCACCGAATACACCACA+TGG | - | chr4_1:85689839-85689858 | None:intergenic | 45.0% | |
| AAAATGGCTGGAAACACTCG+GGG | - | chr4_1:85689870-85689889 | None:intergenic | 45.0% | |
| ! | GCCACTTCTTTTATTGCCTC+TGG | + | chr4_1:85690688-85690707 | Msa0580530:intron | 45.0% |
| CCCAGAGGCAATAAAAGAAG+TGG | - | chr4_1:85690692-85690711 | None:intergenic | 45.0% | |
| TAAGAAGGGAAATTGCCCAG+AGG | - | chr4_1:85690707-85690726 | None:intergenic | 45.0% | |
| TCCATCACAATTCTCGCTGA+AGG | + | chr4_1:85690793-85690812 | Msa0580530:intron | 45.0% | |
| TCCTTCAGCGAGAATTGTGA+TGG | - | chr4_1:85690797-85690816 | None:intergenic | 45.0% | |
| CACTTGACATGCGGAGAAAA+TGG | - | chr4_1:85691006-85691025 | None:intergenic | 45.0% | |
| !! | GGGATATAAGGTTGGTTTGG+TGG | + | chr4_1:85691069-85691088 | Msa0580530:intron | 45.0% |
| !! | TAAGGTTGGTTTGGTGGATG+AGG | + | chr4_1:85691075-85691094 | Msa0580530:intron | 45.0% |
| TAAGGAGTGGAGTGATAAGG+AGG | + | chr4_1:85691109-85691128 | Msa0580530:intron | 45.0% | |
| TGGAGTGATAAGGAGGTTGA+GGG | + | chr4_1:85691116-85691135 | Msa0580530:intron | 45.0% | |
| AAACAAGATCTTGCTCCACC+TGG | - | chr4_1:85691523-85691542 | None:intergenic | 45.0% | |
| AGGTGTGATTTCTGTCTTGC+TGG | + | chr4_1:85691855-85691874 | Msa0580530:intron | 45.0% | |
| GGTGTGATTTCTGTCTTGCT+GGG | + | chr4_1:85691856-85691875 | Msa0580530:intron | 45.0% | |
| ! | GTAAAAAGAAGCGTGCTGCA+AGG | + | chr4_1:85692123-85692142 | Msa0580530:CDS | 45.0% |
| GTCCTGGGGAAGAAGAAAAA+TGG | + | chr4_1:85692153-85692172 | Msa0580530:CDS | 45.0% | |
| !!! | TGCCATTTTTCTTCTTCCCC+AGG | - | chr4_1:85692158-85692177 | None:intergenic | 45.0% |
| TCATCCACTCGTCACATATG+CGG | - | chr4_1:85692448-85692467 | None:intergenic | 45.0% | |
| GATCAAGACGTACACCAAGT+TGG | + | chr4_1:85692603-85692622 | Msa0580530:CDS | 45.0% | |
| !! | GCTCTGATGATGGGTATTCA+AGG | + | chr4_1:85692639-85692658 | Msa0580530:CDS | 45.0% |
| GAAACGTGTGCTTCATTGTC+TGG | + | chr4_1:85692794-85692813 | Msa0580530:intron | 45.0% | |
| AACGTGTGCTTCATTGTCTG+GGG | + | chr4_1:85692796-85692815 | Msa0580530:intron | 45.0% | |
| TTTATGCCACTAAGTGGGGT+CGG | - | chr4_1:85692924-85692943 | None:intergenic | 45.0% | |
| ! | CCAAGCTTTATGCCACTAAG+TGG | - | chr4_1:85692930-85692949 | None:intergenic | 45.0% |
| CCACTTAGTGGCATAAAGCT+TGG | + | chr4_1:85692927-85692946 | Msa0580530:intron | 45.0% | |
| CTTGCCACAAGCTTACTAGA+AGG | + | chr4_1:85693978-85693997 | Msa0580530:CDS | 45.0% | |
| TCAGCCTTCTAGTAAGCTTG+TGG | - | chr4_1:85693985-85694004 | None:intergenic | 45.0% | |
| CACACATTCGGCACAGAAAA+AGG | - | chr4_1:85694079-85694098 | None:intergenic | 45.0% | |
| GATATTCAACTCCTTGTGGC+TGG | + | chr4_1:85694306-85694325 | Msa0580530:three_prime_UTR | 45.0% | |
| TATGTCATCAAGTGACTGGG+TGG | - | chr4_1:85694334-85694353 | None:intergenic | 45.0% | |
| !! | AAATATTTAATATTTAAAGA+TGG | + | chr4_1:85686346-85686365 | Msa0580530:intron | 5.0% |
| !! | TAACTAAAATATTAAAAAAT+AGG | + | chr4_1:85688458-85688477 | Msa0580530:intron | 5.0% |
| TCTGATTCCTCCTCTTACGG+TGG | + | chr4_1:85685120-85685139 | Msa0580530:CDS | 50.0% | |
| CGAACTGGGCTATGTGCAAT+TGG | + | chr4_1:85686313-85686332 | Msa0580530:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr4_1:85686453-85686472 | None:intergenic | 50.0% | |
| TATGTTTCGGCTACTCTGGC+TGG | - | chr4_1:85686541-85686560 | None:intergenic | 50.0% | |
| ATGGCTGATATCACCGACGA+AGG | + | chr4_1:85686731-85686750 | Msa0580530:CDS | 50.0% | |
| !! | TGGGGGGCATCCTCATTTAT+TGG | + | chr4_1:85686885-85686904 | Msa0580530:intron | 50.0% |
| !! | GGGGGGCATCCTCATTTATT+GGG | + | chr4_1:85686886-85686905 | Msa0580530:intron | 50.0% |
| TTCATGTGCGGCGGAAGAAT+CGG | + | chr4_1:85688330-85688349 | Msa0580530:intron | 50.0% | |
| GCATGACCACAGGTATGACA+TGG | - | chr4_1:85688509-85688528 | None:intergenic | 50.0% | |
| TGTGTTTGCGTCTAGGGACT+TGG | - | chr4_1:85688979-85688998 | None:intergenic | 50.0% | |
| !! | GTTCCTACAAAGCTTGCTGC+TGG | + | chr4_1:85689020-85689039 | Msa0580530:CDS | 50.0% |
| ! | ACTCCAGCAGCAAGCTTTGT+AGG | - | chr4_1:85689026-85689045 | None:intergenic | 50.0% |
| !! | AAAGCTTGCTGCTGGAGTCT+GGG | + | chr4_1:85689028-85689047 | Msa0580530:CDS | 50.0% |
| ! | TTTAAGGTTCCTGGCAAGGC+CGG | + | chr4_1:85689399-85689418 | Msa0580530:intron | 50.0% |
| CCACAGCGGGGAATGAATTT+AGG | - | chr4_1:85689795-85689814 | None:intergenic | 50.0% | |
| CCTAAATTCATTCCCCGCTG+TGG | + | chr4_1:85689792-85689811 | Msa0580530:intron | 50.0% | |
| ! | GTCAACTTTTACCCACAGCG+GGG | - | chr4_1:85689807-85689826 | None:intergenic | 50.0% |
| ! | CGTCAACTTTTACCCACAGC+GGG | - | chr4_1:85689808-85689827 | None:intergenic | 50.0% |
| ! | GCGTCAACTTTTACCCACAG+CGG | - | chr4_1:85689809-85689828 | None:intergenic | 50.0% |
| TCACCGAATACACCACATGG+TGG | - | chr4_1:85689836-85689855 | None:intergenic | 50.0% | |
| CAAACTCTCCCTCCATGTAG+AGG | + | chr4_1:85690557-85690576 | Msa0580530:CDS | 50.0% | |
| !! | TTGGTTTGGTGGATGAGGTG+TGG | + | chr4_1:85691080-85691099 | Msa0580530:intron | 50.0% |
| !! | TGGTTTGGTGGATGAGGTGT+GGG | + | chr4_1:85691081-85691100 | Msa0580530:intron | 50.0% |
| GATGAGGTGTGGGGAAGTTA+AGG | + | chr4_1:85691091-85691110 | Msa0580530:intron | 50.0% | |
| GTGGAGTGATAAGGAGGTTG+AGG | + | chr4_1:85691115-85691134 | Msa0580530:intron | 50.0% | |
| GTCTTCTTGATCCAGCTTGC+AGG | + | chr4_1:85691452-85691471 | Msa0580530:intron | 50.0% | |
| TCATTAGGGAGTCAGGACTG+CGG | + | chr4_1:85691489-85691508 | Msa0580530:CDS | 50.0% | |
| GTTGTGTCCTGCGTAAAAGC+GGG | - | chr4_1:85691749-85691768 | None:intergenic | 50.0% | |
| GGTTGTGTCCTGCGTAAAAG+CGG | - | chr4_1:85691750-85691769 | None:intergenic | 50.0% | |
| GGTAGCACGGTTAACAGATG+AGG | + | chr4_1:85691986-85692005 | Msa0580530:intron | 50.0% | |
| CTGCAAGGATAGAACGTCCT+GGG | + | chr4_1:85692138-85692157 | Msa0580530:CDS | 50.0% | |
| TGCAAGGATAGAACGTCCTG+GGG | + | chr4_1:85692139-85692158 | Msa0580530:CDS | 50.0% | |
| ATAGCCGCATATGTGACGAG+TGG | + | chr4_1:85692441-85692460 | Msa0580530:CDS | 50.0% | |
| GAGCTGTGGAAAGTTGCACT+TGG | - | chr4_1:85692542-85692561 | None:intergenic | 50.0% | |
| ! | TTCCACAGCTCACCTTTTGC+TGG | + | chr4_1:85692551-85692570 | Msa0580530:CDS | 50.0% |
| ! | TCTAAAACAAGGCCGTCGCT+TGG | - | chr4_1:85693194-85693213 | None:intergenic | 50.0% |
| GCCGAATGTGTGCCGTAATT+TGG | + | chr4_1:85694087-85694106 | Msa0580530:intron | 50.0% | |
| GTAATTGGCGCCACCGTAAG+AGG | - | chr4_1:85685133-85685152 | None:intergenic | 55.0% | |
| TACACGCGACCGTAAGCACT+CGG | + | chr4_1:85685170-85685189 | Msa0580530:intron | 55.0% | |
| !! | ATGTAGCGGACCCCACTTAG+TGG | - | chr4_1:85686416-85686435 | None:intergenic | 55.0% |
| ACTAAGTGGGGTCGGCAACA+TGG | - | chr4_1:85686445-85686464 | None:intergenic | 55.0% | |
| ATGTTGCCGACCCCACTTAG+TGG | + | chr4_1:85686444-85686463 | Msa0580530:intron | 55.0% | |
| TGTTGCCGACCCCACTTAGT+GGG | + | chr4_1:85686445-85686464 | Msa0580530:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr4_1:85686451-85686470 | Msa0580530:intron | 55.0% | |
| CTGGAAGGGCTCCCTTATAC+AGG | + | chr4_1:85687608-85687627 | Msa0580530:CDS | 55.0% | |
| !! | CTGAGGGTGTCGTCTCGATT+AGG | + | chr4_1:85687784-85687803 | Msa0580530:CDS | 55.0% |
| TCATGTGCGGCGGAAGAATC+GGG | + | chr4_1:85688331-85688350 | Msa0580530:intron | 55.0% | |
| !! | CAAAGCTTGCTGCTGGAGTC+TGG | + | chr4_1:85689027-85689046 | Msa0580530:CDS | 55.0% |
| AACTCGCAGGTCTCAGTCTG+AGG | - | chr4_1:85689092-85689111 | None:intergenic | 55.0% | |
| GTTGACGCTTTGCCACCATG+TGG | + | chr4_1:85689821-85689840 | Msa0580530:intron | 55.0% | |
| !! | GGTTTGGTGGATGAGGTGTG+GGG | + | chr4_1:85691082-85691101 | Msa0580530:intron | 55.0% |
| GGTGTGGGGAAGTTAAGGAG+TGG | + | chr4_1:85691096-85691115 | Msa0580530:intron | 55.0% | |
| CATTAGGGAGTCAGGACTGC+GGG | + | chr4_1:85691490-85691509 | Msa0580530:CDS | 55.0% | |
| !! | ACATGTGCCCGCTTTTACGC+AGG | + | chr4_1:85691739-85691758 | Msa0580530:intron | 55.0% |
| GCTGCAAGGATAGAACGTCC+TGG | + | chr4_1:85692137-85692156 | Msa0580530:CDS | 55.0% | |
| TGCCAGCAAAAGGTGAGCTG+TGG | - | chr4_1:85692556-85692575 | None:intergenic | 55.0% | |
| ! | AAACCGCGAGGCTCTGATGA+TGG | + | chr4_1:85692629-85692648 | Msa0580530:CDS | 55.0% |
| ! | AACCGCGAGGCTCTGATGAT+GGG | + | chr4_1:85692630-85692649 | Msa0580530:CDS | 55.0% |
| TACCCATCATCAGAGCCTCG+CGG | - | chr4_1:85692635-85692654 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr4_1:85692915-85692934 | Msa0580530:intron | 55.0% | |
| CTTGTCGGCACGCAGTGATT+CGG | + | chr4_1:85693774-85693793 | Msa0580530:intron | 55.0% | |
| !! | CACGCAGTGATTCGGTGCTT+AGG | + | chr4_1:85693782-85693801 | Msa0580530:intron | 55.0% |
| ATTGGCGCCACCGTAAGAGG+AGG | - | chr4_1:85685130-85685149 | None:intergenic | 60.0% | |
| GGGTGGCCATGTCATACCTG+TGG | + | chr4_1:85688500-85688519 | Msa0580530:intron | 60.0% | |
| GCAGCACGAAAGCGGATGGA+AGG | - | chr4_1:85688957-85688976 | None:intergenic | 60.0% | |
| CTTGGCAGCACGAAAGCGGA+TGG | - | chr4_1:85688961-85688980 | None:intergenic | 60.0% | |
| GGGACTTGGCAGCACGAAAG+CGG | - | chr4_1:85688965-85688984 | None:intergenic | 60.0% | |
| TGGCGAAGCTCGAGCCATAC+AGG | - | chr4_1:85689468-85689487 | None:intergenic | 60.0% | |
| GAGTCAGGACTGCGGGAACT+GGG | + | chr4_1:85691497-85691516 | Msa0580530:CDS | 60.0% | |
| ! | CCTCGCGGTTTTGCCCAACT+TGG | - | chr4_1:85692620-85692639 | None:intergenic | 60.0% |
| ! | CCAAGTTGGGCAAAACCGCG+AGG | + | chr4_1:85692617-85692636 | Msa0580530:CDS | 60.0% |
| CACTTCCCACGACCAAGCGA+CGG | + | chr4_1:85693179-85693198 | Msa0580530:intron | 60.0% | |
| ACTGGGTGGAACCAGCCACA+AGG | - | chr4_1:85694320-85694339 | None:intergenic | 60.0% | |
| AAGGTTCCTGGCAAGGCCGG+AGG | + | chr4_1:85689402-85689421 | Msa0580530:intron | 65.0% | |
| GGAGTCAGGACTGCGGGAAC+TGG | + | chr4_1:85691496-85691515 | Msa0580530:CDS | 65.0% | |
| CAAGGCCGTCGCTTGGTCGT+GGG | - | chr4_1:85693187-85693206 | None:intergenic | 65.0% | |
| ACAAGGCCGTCGCTTGGTCG+TGG | - | chr4_1:85693188-85693207 | None:intergenic | 65.0% | |
| GGTAGACCTCCGGCCTTGCC+AGG | - | chr4_1:85689411-85689430 | None:intergenic | 70.0% | |
| AGGACTGCGGGAACTGGGCC+AGG | + | chr4_1:85691502-85691521 | Msa0580530:CDS | 70.0% | |
| ACTGCGGGAACTGGGCCAGG+TGG | + | chr4_1:85691505-85691524 | Msa0580530:CDS | 70.0% | |
| CGGTGGCGCAACCCGATCAG+AGG | + | chr4_1:85693858-85693877 | Msa0580530:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 85685029 | 85694485 | 85685029 | ID=Msa0580530;Name=Msa0580530 |
| chr4_1 | mRNA | 85685029 | 85694485 | 85685029 | ID=Msa0580530-mRNA-1;Parent=Msa0580530;Name=Msa0580530-mRNA-1;_AED=0.16;_eAED=0.16;_QI=76|0.94|0.95|1|0.89|0.9|20|270|686 |
| chr4_1 | exon | 85685029 | 85685180 | 85685029 | ID=Msa0580530-mRNA-1:exon:31519;Parent=Msa0580530-mRNA-1 |
| chr4_1 | exon | 85685331 | 85685389 | 85685331 | ID=Msa0580530-mRNA-1:exon:31520;Parent=Msa0580530-mRNA-1 |
| chr4_1 | exon | 85686680 | 85686761 | 85686680 | ID=Msa0580530-mRNA-1:exon:31521;Parent=Msa0580530-mRNA-1 |
| chr4_1 | exon | 85686966 | 85687044 | 85686966 | ID=Msa0580530-mRNA-1:exon:31522;Parent=Msa0580530-mRNA-1 |
| chr4_1 | exon | 85687582 | 85687632 | 85687582 | ID=Msa0580530-mRNA-1:exon:31523;Parent=Msa0580530-mRNA-1 |
| chr4_1 | exon | 85687723 | 85687819 | 85687723 | ID=Msa0580530-mRNA-1:exon:31524;Parent=Msa0580530-mRNA-1 |
| chr4_1 | exon | 85687931 | 85687963 | 85687931 | ID=Msa0580530-mRNA-1:exon:31525;Parent=Msa0580530-mRNA-1 |
| chr4_1 | exon | 85688713 | 85688838 | 85688713 | ID=Msa0580530-mRNA-1:exon:31526;Parent=Msa0580530-mRNA-1 |
| chr4_1 | exon | 85688948 | 85689139 | 85688948 | ID=Msa0580530-mRNA-1:exon:31527;Parent=Msa0580530-mRNA-1 |
| chr4_1 | exon | 85689233 | 85689316 | 85689233 | ID=Msa0580530-mRNA-1:exon:31528;Parent=Msa0580530-mRNA-1 |
| chr4_1 | exon | 85689405 | 85689503 | 85689405 | ID=Msa0580530-mRNA-1:exon:31529;Parent=Msa0580530-mRNA-1 |
| chr4_1 | exon | 85689573 | 85689649 | 85689573 | ID=Msa0580530-mRNA-1:exon:31530;Parent=Msa0580530-mRNA-1 |
| chr4_1 | exon | 85690482 | 85690578 | 85690482 | ID=Msa0580530-mRNA-1:exon:31531;Parent=Msa0580530-mRNA-1 |
| chr4_1 | exon | 85691467 | 85691592 | 85691467 | ID=Msa0580530-mRNA-1:exon:31532;Parent=Msa0580530-mRNA-1 |
| chr4_1 | exon | 85691761 | 85691856 | 85691761 | ID=Msa0580530-mRNA-1:exon:31533;Parent=Msa0580530-mRNA-1 |
| chr4_1 | exon | 85691987 | 85692205 | 85691987 | ID=Msa0580530-mRNA-1:exon:31534;Parent=Msa0580530-mRNA-1 |
| chr4_1 | exon | 85692428 | 85692660 | 85692428 | ID=Msa0580530-mRNA-1:exon:31535;Parent=Msa0580530-mRNA-1 |
| chr4_1 | exon | 85693789 | 85693879 | 85693789 | ID=Msa0580530-mRNA-1:exon:31536;Parent=Msa0580530-mRNA-1 |
| chr4_1 | exon | 85693971 | 85694060 | 85693971 | ID=Msa0580530-mRNA-1:exon:31537;Parent=Msa0580530-mRNA-1 |
| chr4_1 | exon | 85694162 | 85694485 | 85694162 | ID=Msa0580530-mRNA-1:exon:31538;Parent=Msa0580530-mRNA-1 |
| chr4_1 | five_prime_UTR | 85685029 | 85685104 | 85685029 | ID=Msa0580530-mRNA-1:five_prime_utr;Parent=Msa0580530-mRNA-1 |
| chr4_1 | CDS | 85685105 | 85685180 | 85685105 | ID=Msa0580530-mRNA-1:cds;Parent=Msa0580530-mRNA-1 |
| chr4_1 | CDS | 85685331 | 85685389 | 85685331 | ID=Msa0580530-mRNA-1:cds;Parent=Msa0580530-mRNA-1 |
| chr4_1 | CDS | 85686680 | 85686761 | 85686680 | ID=Msa0580530-mRNA-1:cds;Parent=Msa0580530-mRNA-1 |
| chr4_1 | CDS | 85686966 | 85687044 | 85686966 | ID=Msa0580530-mRNA-1:cds;Parent=Msa0580530-mRNA-1 |
| chr4_1 | CDS | 85687582 | 85687632 | 85687582 | ID=Msa0580530-mRNA-1:cds;Parent=Msa0580530-mRNA-1 |
| chr4_1 | CDS | 85687723 | 85687819 | 85687723 | ID=Msa0580530-mRNA-1:cds;Parent=Msa0580530-mRNA-1 |
| chr4_1 | CDS | 85687931 | 85687963 | 85687931 | ID=Msa0580530-mRNA-1:cds;Parent=Msa0580530-mRNA-1 |
| chr4_1 | CDS | 85688713 | 85688838 | 85688713 | ID=Msa0580530-mRNA-1:cds;Parent=Msa0580530-mRNA-1 |
| chr4_1 | CDS | 85688948 | 85689139 | 85688948 | ID=Msa0580530-mRNA-1:cds;Parent=Msa0580530-mRNA-1 |
| chr4_1 | CDS | 85689233 | 85689316 | 85689233 | ID=Msa0580530-mRNA-1:cds;Parent=Msa0580530-mRNA-1 |
| chr4_1 | CDS | 85689405 | 85689503 | 85689405 | ID=Msa0580530-mRNA-1:cds;Parent=Msa0580530-mRNA-1 |
| chr4_1 | CDS | 85689573 | 85689649 | 85689573 | ID=Msa0580530-mRNA-1:cds;Parent=Msa0580530-mRNA-1 |
| chr4_1 | CDS | 85690482 | 85690578 | 85690482 | ID=Msa0580530-mRNA-1:cds;Parent=Msa0580530-mRNA-1 |
| chr4_1 | CDS | 85691467 | 85691592 | 85691467 | ID=Msa0580530-mRNA-1:cds;Parent=Msa0580530-mRNA-1 |
| chr4_1 | CDS | 85691761 | 85691856 | 85691761 | ID=Msa0580530-mRNA-1:cds;Parent=Msa0580530-mRNA-1 |
| chr4_1 | CDS | 85691987 | 85692205 | 85691987 | ID=Msa0580530-mRNA-1:cds;Parent=Msa0580530-mRNA-1 |
| chr4_1 | CDS | 85692428 | 85692660 | 85692428 | ID=Msa0580530-mRNA-1:cds;Parent=Msa0580530-mRNA-1 |
| chr4_1 | CDS | 85693789 | 85693879 | 85693789 | ID=Msa0580530-mRNA-1:cds;Parent=Msa0580530-mRNA-1 |
| chr4_1 | CDS | 85693971 | 85694060 | 85693971 | ID=Msa0580530-mRNA-1:cds;Parent=Msa0580530-mRNA-1 |
| chr4_1 | CDS | 85694162 | 85694215 | 85694162 | ID=Msa0580530-mRNA-1:cds;Parent=Msa0580530-mRNA-1 |
| chr4_1 | three_prime_UTR | 85694216 | 85694485 | 85694216 | ID=Msa0580530-mRNA-1:three_prime_utr;Parent=Msa0580530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
