Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0947760 | A0A396HEB1 | 80.282 | 71 | 10 | 2 | 1 | 71 | 1 | 67 | 7.29e-24 | 96.3 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006070 | Msa0947760 | 0.815974 | 7.020356e-52 | -8.615850e-47 |
| Msa0011170 | Msa0947760 | 0.818149 | 2.278860e-52 | -8.615850e-47 |
| Msa0012040 | Msa0947760 | 0.823622 | 1.254383e-53 | -8.615850e-47 |
| Msa0017320 | Msa0947760 | 0.813027 | 3.150129e-51 | -8.615850e-47 |
| Msa0018070 | Msa0947760 | 0.808705 | 2.715876e-50 | -8.615850e-47 |
| Msa0028660 | Msa0947760 | 0.835901 | 1.281020e-56 | -8.615850e-47 |
| Msa0037840 | Msa0947760 | 0.801672 | 8.062983e-49 | -8.615850e-47 |
| Msa0037880 | Msa0947760 | 0.835923 | 1.264395e-56 | -8.615850e-47 |
| Msa0039330 | Msa0947760 | 0.808502 | 3.000766e-50 | -8.615850e-47 |
| Msa0043980 | Msa0947760 | 0.831373 | 1.732160e-55 | -8.615850e-47 |
| Msa0052030 | Msa0947760 | 0.808815 | 2.572360e-50 | -8.615850e-47 |
| Msa0065950 | Msa0947760 | 0.817605 | 3.023774e-52 | -8.615850e-47 |
| Msa0076320 | Msa0947760 | 0.818528 | 1.870641e-52 | -8.615850e-47 |
| Msa0081930 | Msa0947760 | 0.802770 | 4.791208e-49 | -8.615850e-47 |
| Msa0095560 | Msa0947760 | 0.800812 | 1.209183e-48 | -8.615850e-47 |
| Msa0096030 | Msa0947760 | 0.829412 | 5.222782e-55 | -8.615850e-47 |
| Msa0100090 | Msa0947760 | 0.810590 | 1.068726e-50 | -8.615850e-47 |
| Msa0102120 | Msa0947760 | 0.805036 | 1.620067e-49 | -8.615850e-47 |
| Msa0104800 | Msa0947760 | 0.802488 | 5.478608e-49 | -8.615850e-47 |
| Msa0105700 | Msa0947760 | 0.801247 | 9.851255e-49 | -8.615850e-47 |
| Msa0115270 | Msa0947760 | 0.817705 | 2.870149e-52 | -8.615850e-47 |
| Msa0608160 | Msa0947760 | 0.816841 | 4.491563e-52 | -8.615850e-47 |
| Msa0608710 | Msa0947760 | 0.837290 | 5.673412e-57 | -8.615850e-47 |
| Msa0610130 | Msa0947760 | 0.814324 | 1.632934e-51 | -8.615850e-47 |
| Msa0610180 | Msa0947760 | 0.807814 | 4.205992e-50 | -8.615850e-47 |
| Msa0610430 | Msa0947760 | 0.847931 | 8.463060e-60 | -8.615850e-47 |
| Msa0620960 | Msa0947760 | 0.830649 | 2.608048e-55 | -8.615850e-47 |
| Msa0621790 | Msa0947760 | 0.806288 | 8.848317e-50 | -8.615850e-47 |
| Msa0626990 | Msa0947760 | 0.805231 | 1.475126e-49 | -8.615850e-47 |
| Msa0627350 | Msa0947760 | 0.814637 | 1.392231e-51 | -8.615850e-47 |
| Msa0630950 | Msa0947760 | 0.803251 | 3.812020e-49 | -8.615850e-47 |
| Msa0632870 | Msa0947760 | 0.807979 | 3.880208e-50 | -8.615850e-47 |
| Msa0635380 | Msa0947760 | 0.821337 | 4.259114e-53 | -8.615850e-47 |
| Msa0641670 | Msa0947760 | 0.802520 | 5.396295e-49 | -8.615850e-47 |
| Msa0647830 | Msa0947760 | 0.803713 | 3.057619e-49 | -8.615850e-47 |
| Msa0648080 | Msa0947760 | 0.818428 | 1.970534e-52 | -8.615850e-47 |
| Msa0648860 | Msa0947760 | 0.806050 | 9.929379e-50 | -8.615850e-47 |
| Msa0649350 | Msa0947760 | 0.835238 | 1.884585e-56 | -8.615850e-47 |
| Msa0653490 | Msa0947760 | 0.828607 | 8.184986e-55 | -8.615850e-47 |
| Msa0654010 | Msa0947760 | 0.809146 | 2.185281e-50 | -8.615850e-47 |
| Msa0657870 | Msa0947760 | 0.823546 | 1.306935e-53 | -8.615850e-47 |
| Msa0660300 | Msa0947760 | 0.832637 | 8.439121e-56 | -8.615850e-47 |
| Msa0664970 | Msa0947760 | 0.810094 | 1.367384e-50 | -8.615850e-47 |
| Msa0673460 | Msa0947760 | 0.821502 | 3.903446e-53 | -8.615850e-47 |
| Msa0679530 | Msa0947760 | 0.804206 | 2.414500e-49 | -8.615850e-47 |
| Msa0679550 | Msa0947760 | 0.843083 | 1.742314e-58 | -8.615850e-47 |
| Msa0683170 | Msa0947760 | 0.809382 | 1.944909e-50 | -8.615850e-47 |
| Msa0689780 | Msa0947760 | 0.803228 | 3.853721e-49 | -8.615850e-47 |
| Msa0692830 | Msa0947760 | 0.831741 | 1.405305e-55 | -8.615850e-47 |
| Msa0692950 | Msa0947760 | 0.820873 | 5.450508e-53 | -8.615850e-47 |
| Msa0693380 | Msa0947760 | 0.805094 | 1.575515e-49 | -8.615850e-47 |
| Msa0703910 | Msa0947760 | 0.812072 | 5.095760e-51 | -8.615850e-47 |
| Msa0715410 | Msa0947760 | 0.803124 | 4.048858e-49 | -8.615850e-47 |
| Msa0716960 | Msa0947760 | 0.800955 | 1.130412e-48 | -8.615850e-47 |
| Msa0717010 | Msa0947760 | 0.806643 | 7.444416e-50 | -8.615850e-47 |
| Msa0723110 | Msa0947760 | 0.809867 | 1.530210e-50 | -8.615850e-47 |
| Msa0731180 | Msa0947760 | 0.856670 | 2.749892e-62 | -8.615850e-47 |
| Msa0737600 | Msa0947760 | 0.806450 | 8.179138e-50 | -8.615850e-47 |
| Msa0741690 | Msa0947760 | 0.801116 | 1.048116e-48 | -8.615850e-47 |
| Msa0742150 | Msa0947760 | 0.819929 | 8.973568e-53 | -8.615850e-47 |
| Msa0743720 | Msa0947760 | 0.813097 | 3.041714e-51 | -8.615850e-47 |
| Msa0771580 | Msa0947760 | 0.823465 | 1.365182e-53 | -8.615850e-47 |
| Msa0771720 | Msa0947760 | 0.818441 | 1.957046e-52 | -8.615850e-47 |
| Msa0773840 | Msa0947760 | 0.814893 | 1.221411e-51 | -8.615850e-47 |
| Msa0784860 | Msa0947760 | 0.812714 | 3.688654e-51 | -8.615850e-47 |
| Msa0786070 | Msa0947760 | 0.809488 | 1.845715e-50 | -8.615850e-47 |
| Msa0786780 | Msa0947760 | 0.820051 | 8.410726e-53 | -8.615850e-47 |
| Msa0789020 | Msa0947760 | 0.802184 | 6.326701e-49 | -8.615850e-47 |
| Msa0793380 | Msa0947760 | 0.824861 | 6.415788e-54 | -8.615850e-47 |
| Msa0793390 | Msa0947760 | 0.804768 | 1.843482e-49 | -8.615850e-47 |
| Msa0795080 | Msa0947760 | 0.809866 | 1.530727e-50 | -8.615850e-47 |
| Msa0795720 | Msa0947760 | 0.809301 | 2.024654e-50 | -8.615850e-47 |
| Msa0808080 | Msa0947760 | 0.812505 | 4.098417e-51 | -8.615850e-47 |
| Msa0820850 | Msa0947760 | 0.811944 | 5.434827e-51 | -8.615850e-47 |
| Msa0831590 | Msa0947760 | 0.825822 | 3.801789e-54 | -8.615850e-47 |
| Msa0831850 | Msa0947760 | 0.802622 | 5.140273e-49 | -8.615850e-47 |
| Msa0833460 | Msa0947760 | 0.827512 | 1.501561e-54 | -8.615850e-47 |
| Msa0129190 | Msa0947760 | -0.806577 | 7.690615e-50 | -8.615850e-47 |
| Msa0135490 | Msa0947760 | 0.803676 | 3.111435e-49 | -8.615850e-47 |
| Msa0138020 | Msa0947760 | 0.833259 | 5.909354e-56 | -8.615850e-47 |
| Msa0142280 | Msa0947760 | 0.823843 | 1.113498e-53 | -8.615850e-47 |
| Msa0152170 | Msa0947760 | 0.818087 | 2.353837e-52 | -8.615850e-47 |
| Msa0153830 | Msa0947760 | 0.813781 | 2.150939e-51 | -8.615850e-47 |
| Msa0160550 | Msa0947760 | 0.802182 | 6.333226e-49 | -8.615850e-47 |
| Msa0172780 | Msa0947760 | 0.811478 | 6.863242e-51 | -8.615850e-47 |
| Msa0206010 | Msa0947760 | 0.817248 | 3.638481e-52 | -8.615850e-47 |
| Msa0216530 | Msa0947760 | 0.810187 | 1.305429e-50 | -8.615850e-47 |
| Msa0217680 | Msa0947760 | 0.807955 | 3.924723e-50 | -8.615850e-47 |
| Msa0223010 | Msa0947760 | 0.824359 | 8.424350e-54 | -8.615850e-47 |
| Msa0228070 | Msa0947760 | 0.804917 | 1.715683e-49 | -8.615850e-47 |
| Msa0229380 | Msa0947760 | 0.802758 | 4.819514e-49 | -8.615850e-47 |
| Msa0236420 | Msa0947760 | 0.812500 | 4.110010e-51 | -8.615850e-47 |
| Msa0365490 | Msa0947760 | 0.814789 | 1.288076e-51 | -8.615850e-47 |
| Msa0372340 | Msa0947760 | 0.840753 | 7.192393e-58 | -8.615850e-47 |
| Msa0376910 | Msa0947760 | 0.821580 | 3.743211e-53 | -8.615850e-47 |
| Msa0379640 | Msa0947760 | 0.841629 | 4.232893e-58 | -8.615850e-47 |
| Msa0383800 | Msa0947760 | 0.806172 | 9.358638e-50 | -8.615850e-47 |
| Msa0388840 | Msa0947760 | 0.806295 | 8.816809e-50 | -8.615850e-47 |
| Msa0389810 | Msa0947760 | 0.820008 | 8.604535e-53 | -8.615850e-47 |
| Msa0394340 | Msa0947760 | 0.802063 | 6.702813e-49 | -8.615850e-47 |
| Msa0399340 | Msa0947760 | 0.806853 | 6.724584e-50 | -8.615850e-47 |
| Msa0402790 | Msa0947760 | 0.805596 | 1.236890e-49 | -8.615850e-47 |
| Msa0404000 | Msa0947760 | 0.800541 | 1.372943e-48 | -8.615850e-47 |
| Msa0404030 | Msa0947760 | 0.827622 | 1.413247e-54 | -8.615850e-47 |
| Msa0412840 | Msa0947760 | 0.831091 | 2.031291e-55 | -8.615850e-47 |
| Msa0431670 | Msa0947760 | 0.808676 | 2.755092e-50 | -8.615850e-47 |
| Msa0433530 | Msa0947760 | 0.812351 | 4.428430e-51 | -8.615850e-47 |
| Msa0434180 | Msa0947760 | 0.810413 | 1.167184e-50 | -8.615850e-47 |
| Msa0436760 | Msa0947760 | 0.806594 | 7.626913e-50 | -8.615850e-47 |
| Msa0440600 | Msa0947760 | 0.809521 | 1.816433e-50 | -8.615850e-47 |
| Msa0442200 | Msa0947760 | 0.848421 | 6.196682e-60 | -8.615850e-47 |
| Msa0453350 | Msa0947760 | 0.801455 | 8.931035e-49 | -8.615850e-47 |
| Msa0455760 | Msa0947760 | 0.813602 | 2.355594e-51 | -8.615850e-47 |
| Msa0457510 | Msa0947760 | 0.811917 | 5.507454e-51 | -8.615850e-47 |
| Msa0466390 | Msa0947760 | 0.803255 | 3.804136e-49 | -8.615850e-47 |
| Msa0468130 | Msa0947760 | 0.829960 | 3.842020e-55 | -8.615850e-47 |
| Msa0471900 | Msa0947760 | 0.828734 | 7.624819e-55 | -8.615850e-47 |
| Msa0477080 | Msa0947760 | 0.807951 | 3.932043e-50 | -8.615850e-47 |
| Msa0477260 | Msa0947760 | 0.827633 | 1.404862e-54 | -8.615850e-47 |
| Msa0479970 | Msa0947760 | 0.801659 | 8.113064e-49 | -8.615850e-47 |
| Msa0481280 | Msa0947760 | 0.805897 | 1.069280e-49 | -8.615850e-47 |
| Msa0244140 | Msa0947760 | 0.801600 | 8.341769e-49 | -8.615850e-47 |
| Msa0244190 | Msa0947760 | 0.809701 | 1.661047e-50 | -8.615850e-47 |
| Msa0256330 | Msa0947760 | 0.822074 | 2.878116e-53 | -8.615850e-47 |
| Msa0257500 | Msa0947760 | 0.806265 | 8.947915e-50 | -8.615850e-47 |
| Msa0264690 | Msa0947760 | 0.804521 | 2.075753e-49 | -8.615850e-47 |
| Msa0269450 | Msa0947760 | 0.801805 | 7.572939e-49 | -8.615850e-47 |
| Msa0269810 | Msa0947760 | 0.800071 | 1.711370e-48 | -8.615850e-47 |
| Msa0270960 | Msa0947760 | 0.817100 | 3.928918e-52 | -8.615850e-47 |
| Msa0280090 | Msa0947760 | 0.802760 | 4.814456e-49 | -8.615850e-47 |
| Msa0287410 | Msa0947760 | 0.809059 | 2.280974e-50 | -8.615850e-47 |
| Msa0295330 | Msa0947760 | 0.822889 | 1.860258e-53 | -8.615850e-47 |
| Msa0302400 | Msa0947760 | 0.819943 | 8.907057e-53 | -8.615850e-47 |
| Msa0309550 | Msa0947760 | 0.801497 | 8.757046e-49 | -8.615850e-47 |
| Msa0319170 | Msa0947760 | 0.837906 | 3.943121e-57 | -8.615850e-47 |
| Msa0321080 | Msa0947760 | 0.817497 | 3.197688e-52 | -8.615850e-47 |
| Msa0326110 | Msa0947760 | 0.818044 | 2.406459e-52 | -8.615850e-47 |
| Msa0339620 | Msa0947760 | 0.823280 | 1.508119e-53 | -8.615850e-47 |
| Msa0340450 | Msa0947760 | 0.807015 | 6.212428e-50 | -8.615850e-47 |
| Msa0344830 | Msa0947760 | 0.805072 | 1.592510e-49 | -8.615850e-47 |
| Msa0344910 | Msa0947760 | 0.805739 | 1.154094e-49 | -8.615850e-47 |
| Msa0357760 | Msa0947760 | 0.830282 | 3.206890e-55 | -8.615850e-47 |
| Msa0357790 | Msa0947760 | 0.829733 | 4.363361e-55 | -8.615850e-47 |
| Msa0357830 | Msa0947760 | 0.835200 | 1.927277e-56 | -8.615850e-47 |
| Msa0357840 | Msa0947760 | 0.825087 | 5.674415e-54 | -8.615850e-47 |
| Msa0357870 | Msa0947760 | 0.834765 | 2.480611e-56 | -8.615850e-47 |
| Msa0363790 | Msa0947760 | 0.838310 | 3.102559e-57 | -8.615850e-47 |
| Msa0484780 | Msa0947760 | 0.802590 | 5.219521e-49 | -8.615850e-47 |
| Msa0485490 | Msa0947760 | 0.802878 | 4.551165e-49 | -8.615850e-47 |
| Msa0486690 | Msa0947760 | 0.802230 | 6.192016e-49 | -8.615850e-47 |
| Msa0489610 | Msa0947760 | 0.818214 | 2.202697e-52 | -8.615850e-47 |
| Msa0512750 | Msa0947760 | 0.841644 | 4.192151e-58 | -8.615850e-47 |
| Msa0529040 | Msa0947760 | 0.811691 | 6.167812e-51 | -8.615850e-47 |
| Msa0530650 | Msa0947760 | 0.812434 | 4.247078e-51 | -8.615850e-47 |
| Msa0534410 | Msa0947760 | 0.806261 | 8.962333e-50 | -8.615850e-47 |
| Msa0549780 | Msa0947760 | 0.800603 | 1.334087e-48 | -8.615850e-47 |
| Msa0553460 | Msa0947760 | 0.802809 | 4.704683e-49 | -8.615850e-47 |
| Msa0555450 | Msa0947760 | 0.801858 | 7.384665e-49 | -8.615850e-47 |
| Msa0558690 | Msa0947760 | 0.809581 | 1.762725e-50 | -8.615850e-47 |
| Msa0561230 | Msa0947760 | 0.801615 | 8.282445e-49 | -8.615850e-47 |
| Msa0562440 | Msa0947760 | 0.820508 | 6.609957e-53 | -8.615850e-47 |
| Msa0566020 | Msa0947760 | 0.804618 | 1.981258e-49 | -8.615850e-47 |
| Msa0580530 | Msa0947760 | 0.801967 | 7.013461e-49 | -8.615850e-47 |
| Msa0587030 | Msa0947760 | 0.807325 | 5.340952e-50 | -8.615850e-47 |
| Msa0587190 | Msa0947760 | 0.831702 | 1.437167e-55 | -8.615850e-47 |
| Msa0588240 | Msa0947760 | 0.810156 | 1.326123e-50 | -8.615850e-47 |
| Msa0589190 | Msa0947760 | 0.811230 | 7.767186e-51 | -8.615850e-47 |
| Msa0592440 | Msa0947760 | 0.807029 | 6.172161e-50 | -8.615850e-47 |
| Msa0594560 | Msa0947760 | 0.802911 | 4.481846e-49 | -8.615850e-47 |
| Msa0849030 | Msa0947760 | 0.820591 | 6.325062e-53 | -8.615850e-47 |
| Msa0861130 | Msa0947760 | 0.813915 | 2.009469e-51 | -8.615850e-47 |
| Msa0861470 | Msa0947760 | 0.809939 | 1.476389e-50 | -8.615850e-47 |
| Msa0861570 | Msa0947760 | 0.808327 | 3.270061e-50 | -8.615850e-47 |
| Msa0869120 | Msa0947760 | 0.845144 | 4.876209e-59 | -8.615850e-47 |
| Msa0870150 | Msa0947760 | 0.814275 | 1.674243e-51 | -8.615850e-47 |
| Msa0876580 | Msa0947760 | 0.816111 | 6.545716e-52 | -8.615850e-47 |
| Msa0882690 | Msa0947760 | 0.825176 | 5.405523e-54 | -8.615850e-47 |
| Msa0901320 | Msa0947760 | 0.808942 | 2.416637e-50 | -8.615850e-47 |
| Msa0909110 | Msa0947760 | 0.814972 | 1.173405e-51 | -8.615850e-47 |
| Msa0932830 | Msa0947760 | 0.825078 | 5.703062e-54 | -8.615850e-47 |
| Msa0933290 | Msa0947760 | 0.805409 | 1.353580e-49 | -8.615850e-47 |
| Msa0942070 | Msa0947760 | 0.827728 | 1.332787e-54 | -8.615850e-47 |
| Msa0943190 | Msa0947760 | 0.800229 | 1.589587e-48 | -8.615850e-47 |
| Msa0944550 | Msa0947760 | 0.824927 | 6.189790e-54 | -8.615850e-47 |
| Msa0947760 | Msa0958920 | 0.817900 | 2.593537e-52 | -8.615850e-47 |
| Msa0947760 | Msa0969520 | 0.808948 | 2.409704e-50 | -8.615850e-47 |
| Msa0947760 | Msa0969810 | 0.804477 | 2.120456e-49 | -8.615850e-47 |
| Msa0947760 | Msa0971020 | 0.865848 | 4.383044e-65 | -8.615850e-47 |
| Msa0947760 | Msa0973600 | 0.831762 | 1.389205e-55 | -8.615850e-47 |
| Msa0947760 | Msa0974630 | 0.808165 | 3.540679e-50 | -8.615850e-47 |
| Msa0947760 | Msa0982270 | 0.834775 | 2.465853e-56 | -8.615850e-47 |
| Msa0947760 | Msa0992490 | -0.801692 | 7.985322e-49 | -8.615850e-47 |
| Msa0947760 | Msa0994370 | 0.816334 | 5.832966e-52 | -8.615850e-47 |
| Msa0947760 | Msa0996170 | 0.833569 | 4.946843e-56 | -8.615850e-47 |
| Msa0947760 | Msa1003620 | 0.810771 | 9.766388e-51 | -8.615850e-47 |
| Msa0947760 | Msa1007230 | 0.802936 | 4.427076e-49 | -8.615850e-47 |
| Msa0947760 | Msa1012830 | 0.824876 | 6.365691e-54 | -8.615850e-47 |
| Msa0947760 | Msa1013070 | 0.803596 | 3.232370e-49 | -8.615850e-47 |
| Msa0947760 | Msa1021540 | 0.812770 | 3.586101e-51 | -8.615850e-47 |
| Msa0947760 | Msa1023180 | 0.805051 | 1.608475e-49 | -8.615850e-47 |
| Msa0947760 | Msa1034150 | 0.843577 | 1.286723e-58 | -8.615850e-47 |
| Msa0947760 | Msa1039710 | -0.801517 | 8.673032e-49 | -8.615850e-47 |
| Msa0947760 | Msa1039880 | 0.807955 | 3.925942e-50 | -8.615850e-47 |
| Msa0947760 | Msa1043050 | 0.803308 | 3.708779e-49 | -8.615850e-47 |
| Msa0947760 | Msa1046020 | 0.839206 | 1.819691e-57 | -8.615850e-47 |
| Msa0947760 | Msa1046060 | 0.838398 | 2.945556e-57 | -8.615850e-47 |
| Msa0947760 | Msa1051200 | 0.816382 | 5.691644e-52 | -8.615850e-47 |
| Msa0947760 | Msa1058750 | 0.812502 | 4.106078e-51 | -8.615850e-47 |
| Msa0947760 | Msa1063510 | 0.815421 | 9.325492e-52 | -8.615850e-47 |
| Msa0947760 | Msa1071320 | 0.810969 | 8.849534e-51 | -8.615850e-47 |
| Msa0947760 | Msa1074530 | 0.816227 | 6.164952e-52 | -8.615850e-47 |
| Msa0947760 | Msa1082500 | 0.819054 | 1.420562e-52 | -8.615850e-47 |
| Msa0947760 | Msa1090260 | 0.823070 | 1.688576e-53 | -8.615850e-47 |
| Msa0947760 | Msa1091100 | 0.826036 | 3.381421e-54 | -8.615850e-47 |
| Msa0947760 | Msa1091940 | 0.801997 | 6.913962e-49 | -8.615850e-47 |
| Msa0947760 | Msa1092090 | 0.826060 | 3.336823e-54 | -8.615850e-47 |
| Msa0947760 | Msa1107190 | 0.806300 | 8.796486e-50 | -8.615850e-47 |
| Msa0947760 | Msa1129550 | 0.810919 | 9.073290e-51 | -8.615850e-47 |
| Msa0947760 | Msa1129730 | 0.804194 | 2.428716e-49 | -8.615850e-47 |
| Msa0947760 | Msa1134090 | 0.814315 | 1.640570e-51 | -8.615850e-47 |
| Msa0947760 | Msa1137700 | 0.806997 | 6.268315e-50 | -8.615850e-47 |
| Msa0947760 | Msa1143930 | -0.822685 | 2.075249e-53 | -8.615850e-47 |
| Msa0947760 | Msa1144040 | 0.806374 | 8.484228e-50 | -8.615850e-47 |
| Msa0947760 | Msa1150710 | 0.804562 | 2.035337e-49 | -8.615850e-47 |
| Msa0947760 | Msa1157150 | 0.802338 | 5.883707e-49 | -8.615850e-47 |
| Msa0947760 | Msa1174040 | 0.826821 | 2.197655e-54 | -8.615850e-47 |
| Msa0947760 | Msa1186360 | 0.804227 | 2.390532e-49 | -8.615850e-47 |
| Msa0947760 | Msa1186950 | -0.817629 | 2.986196e-52 | -8.615850e-47 |
| Msa0947760 | Msa1201560 | 0.807136 | 5.857497e-50 | -8.615850e-47 |
| Msa0947760 | Msa1202660 | 0.813723 | 2.215396e-51 | -8.615850e-47 |
| Msa0947760 | Msa1203250 | 0.803522 | 3.348383e-49 | -8.615850e-47 |
| Msa0947760 | Msa1207310 | 0.810498 | 1.118531e-50 | -8.615850e-47 |
| Msa0947760 | Msa1208380 | 0.805692 | 1.180610e-49 | -8.615850e-47 |
| Msa0947760 | Msa1210020 | 0.806136 | 9.522081e-50 | -8.615850e-47 |
| Msa0947760 | Msa1210110 | 0.819122 | 1.370844e-52 | -8.615850e-47 |
| Msa0947760 | Msa1212170 | 0.800070 | 1.712809e-48 | -8.615850e-47 |
| Msa0947760 | Msa1217430 | -0.825663 | 4.146991e-54 | -8.615850e-47 |
| Msa0947760 | Msa1224200 | 0.816767 | 4.666321e-52 | -8.615850e-47 |
| Msa0947760 | Msa1224810 | 0.840203 | 1.001628e-57 | -8.615850e-47 |
| Msa0947760 | Msa1233500 | 0.805006 | 1.644272e-49 | -8.615850e-47 |
| Msa0947760 | Msa1233890 | 0.814592 | 1.424272e-51 | -8.615850e-47 |
| Msa0947760 | Msa1246700 | 0.814461 | 1.522450e-51 | -8.615850e-47 |
| Msa0947760 | Msa1270660 | 0.825885 | 3.671983e-54 | -8.615850e-47 |
| Msa0947760 | Msa1270730 | 0.835028 | 2.128927e-56 | -8.615850e-47 |
| Msa0947760 | Msa1276440 | 0.816522 | 5.296292e-52 | -8.615850e-47 |
| Msa0947760 | Msa1279210 | 0.812399 | 4.322427e-51 | -8.615850e-47 |
| Msa0947760 | Msa1295330 | 0.825889 | 3.664682e-54 | -8.615850e-47 |
| Msa0947760 | Msa1298510 | 0.807384 | 5.188929e-50 | -8.615850e-47 |
| Msa0947760 | Msa1300350 | -0.804425 | 2.173629e-49 | -8.615850e-47 |
| Msa0947760 | Msa1302190 | -0.823656 | 1.231452e-53 | -8.615850e-47 |
| Msa0947760 | Msa1302850 | 0.812675 | 3.763134e-51 | -8.615850e-47 |
| Msa0947760 | Msa1305340 | 0.816765 | 4.671326e-52 | -8.615850e-47 |
| Msa0947760 | Msa1306750 | 0.849058 | 4.123979e-60 | -8.615850e-47 |
| Msa0947760 | Msa1307740 | 0.828795 | 7.371926e-55 | -8.615850e-47 |
| Msa0947760 | Msa1314340 | 0.812126 | 4.960336e-51 | -8.615850e-47 |
| Msa0947760 | Msa1314770 | 0.813023 | 3.157602e-51 | -8.615850e-47 |
| Msa0947760 | Msa1327550 | 0.802272 | 6.068668e-49 | -8.615850e-47 |
| Msa0947760 | Msa1328520 | 0.812815 | 3.506849e-51 | -8.615850e-47 |
| Msa0947760 | Msa1331320 | 0.807849 | 4.134848e-50 | -8.615850e-47 |
| Msa0947760 | Msa1335230 | 0.808652 | 2.788213e-50 | -8.615850e-47 |
| Msa0947760 | Msa1348600 | 0.811392 | 7.165256e-51 | -8.615850e-47 |
| Msa0947760 | Msa1355890 | 0.839879 | 1.216402e-57 | -8.615850e-47 |
| Msa0947760 | Msa1362880 | 0.819256 | 1.277752e-52 | -8.615850e-47 |
| Msa0947760 | Msa1365270 | 0.804577 | 2.020634e-49 | -8.615850e-47 |
| Msa0947760 | Msa1397120 | 0.821992 | 3.006456e-53 | -8.615850e-47 |
| Msa0947760 | Msa1403340 | 0.837258 | 5.780372e-57 | -8.615850e-47 |
| Msa0947760 | Msa1403890 | 0.825554 | 4.400046e-54 | -8.615850e-47 |
| Msa0947760 | Msa1407600 | 0.829024 | 6.487416e-55 | -8.615850e-47 |
| Msa0947760 | Msa1410100 | 0.802932 | 4.436226e-49 | -8.615850e-47 |
| Msa0947760 | Msa1420270 | 0.805986 | 1.024082e-49 | -8.615850e-47 |
| Msa0947760 | Msa1420990 | 0.814332 | 1.626344e-51 | -8.615850e-47 |
| Msa0947760 | Msa1423820 | 0.817574 | 3.073551e-52 | -8.615850e-47 |
| Msa0947760 | Msa1424750 | 0.810022 | 1.417275e-50 | -8.615850e-47 |
| Msa0947760 | Msa1427230 | 0.839833 | 1.250547e-57 | -8.615850e-47 |
| Msa0947760 | Msa1430680 | 0.815200 | 1.044100e-51 | -8.615850e-47 |
| Msa0947760 | Msa1435370 | 0.816954 | 4.237510e-52 | -8.615850e-47 |
| Msa0947760 | Msa1438700 | 0.804506 | 2.090871e-49 | -8.615850e-47 |
| Msa0947760 | Msa1440910 | 0.813014 | 3.171371e-51 | -8.615850e-47 |
| Msa0947760 | Msa1444260 | 0.800057 | 1.722492e-48 | -8.615850e-47 |
| Msa0947760 | Msa1444740 | 0.843492 | 1.355232e-58 | -8.615850e-47 |
| Msa0947760 | Msa1460830 | 0.850115 | 2.091841e-60 | -8.615850e-47 |
| Msa0947760 | Msa1465960 | 0.811975 | 5.350287e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0947760 | MtrunA17_Chr6g0462391 | 80.282 | 71 | 10 | 2 | 1 | 71 | 1 | 67 | 1.40e-27 | 96.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 18 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCAGAACCTTTGTACTTT+AGG | 0.208125 | 6_3:-30988091 | Msa0947760:five_prime_UTR |
| ATATTTGACTATTATCTCTT+TGG | 0.278759 | 6_3:+30988184 | None:intergenic |
| GTTGACACCACTTCTCAAAA+TGG | 0.284964 | 6_3:-30987844 | Msa0947760:CDS |
| TTAATGATTGAGTTTGTTGT+TGG | 0.374228 | 6_3:+30987926 | None:intergenic |
| TTGAGAGAGAGATGCATCTA+TGG | 0.377974 | 6_3:-30988029 | Msa0947760:exon |
| GAATCTCTCAGATTCTTTGT+TGG | 0.383111 | 6_3:+30988006 | None:intergenic |
| ATCATCAAGCAGTTTCTGTT+GGG | 0.399002 | 6_3:+30987900 | None:intergenic |
| CATCATCAAGCAGTTTCTGT+TGG | 0.402774 | 6_3:+30987899 | None:intergenic |
| TAACAGAAGGTCATGACATA+TGG | 0.445027 | 6_3:+30987810 | None:intergenic |
| AGAGCCTTGTTTGAGAGGTA+AGG | 0.487732 | 6_3:+30986666 | None:intergenic |
| ACCTCTCAAACAAGGCTCTA+GGG | 0.512728 | 6_3:-30986662 | Msa0947760:CDS |
| TACCTCTCAAACAAGGCTCT+AGG | 0.528088 | 6_3:-30986663 | Msa0947760:CDS |
| ACCCTAGAGCCTTGTTTGAG+AGG | 0.529926 | 6_3:+30986661 | None:intergenic |
| TACTGTTGTTTCTGCTGTGG+CGG | 0.585711 | 6_3:-30987772 | Msa0947760:intron |
| TGTTACTGTTGTTTCTGCTG+TGG | 0.590386 | 6_3:-30987775 | Msa0947760:CDS |
| AGCAAGAGAGAAGTAACAGA+AGG | 0.609065 | 6_3:+30987797 | None:intergenic |
| TAAATATACCTAAAGTACAA+AGG | 0.648678 | 6_3:+30988083 | None:intergenic |
| AGAACCTTACCTCTCAAACA+AGG | 0.656416 | 6_3:-30986670 | Msa0947760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAAAGAAGTAAAAAA+AGG | + | chr6_3:30987105-30987124 | None:intergenic | 10.0% |
| !!! | TTTTGAAAATTATGAAAATT+TGG | - | chr6_3:30987460-30987479 | Msa0947760:intron | 10.0% |
| !!! | TGAATTTTGATAATTTAATT+TGG | - | chr6_3:30987716-30987735 | Msa0947760:intron | 10.0% |
| !! | TTAAAAAAAGAAGTAAAAAA+AGG | + | chr6_3:30987105-30987124 | None:intergenic | 10.0% |
| !!! | TTTTGAAAATTATGAAAATT+TGG | - | chr6_3:30987460-30987479 | Msa0947760:intron | 10.0% |
| !!! | TGAATTTTGATAATTTAATT+TGG | - | chr6_3:30987716-30987735 | Msa0947760:intron | 10.0% |
| !! | TTGAATAAAACTATATTATG+TGG | - | chr6_3:30987273-30987292 | Msa0947760:intron | 15.0% |
| !! | AAAACATTCAATTATGTATA+TGG | - | chr6_3:30987422-30987441 | Msa0947760:intron | 15.0% |
| !!! | TGAAATTGATAATGAAATAA+TGG | - | chr6_3:30987907-30987926 | Msa0947760:CDS | 15.0% |
| !! | AACTGAAATATAAATAATTG+AGG | + | chr6_3:30988033-30988052 | None:intergenic | 15.0% |
| !! | TTGAATAAAACTATATTATG+TGG | - | chr6_3:30987273-30987292 | Msa0947760:intron | 15.0% |
| !! | AAAACATTCAATTATGTATA+TGG | - | chr6_3:30987422-30987441 | Msa0947760:intron | 15.0% |
| !!! | TGAAATTGATAATGAAATAA+TGG | - | chr6_3:30987907-30987926 | Msa0947760:CDS | 15.0% |
| !! | AACTGAAATATAAATAATTG+AGG | + | chr6_3:30988033-30988052 | None:intergenic | 15.0% |
| !! | TAAATATACCTAAAGTACAA+AGG | + | chr6_3:30986754-30986773 | None:intergenic | 20.0% |
| !!! | ATTGTTTTATTCGTTTTTAC+TGG | - | chr6_3:30987157-30987176 | Msa0947760:intron | 20.0% |
| !!! | TTTTCATAATTTTCAAAACG+TGG | + | chr6_3:30987458-30987477 | None:intergenic | 20.0% |
| !!! | TTAATTTAGTTGATTTTGGA+TGG | + | chr6_3:30987535-30987554 | None:intergenic | 20.0% |
| !!! | ATGGTTAATTTAGTTGATTT+TGG | + | chr6_3:30987539-30987558 | None:intergenic | 20.0% |
| !! | TAGTGTAATAGTGTTTATTA+GGG | - | chr6_3:30987687-30987706 | Msa0947760:intron | 20.0% |
| !! | ATGATTATGATTAATCAAAC+TGG | - | chr6_3:30987779-30987798 | Msa0947760:CDS | 20.0% |
| !! | TAAATATACCTAAAGTACAA+AGG | + | chr6_3:30986754-30986773 | None:intergenic | 20.0% |
| !!! | ATTGTTTTATTCGTTTTTAC+TGG | - | chr6_3:30987157-30987176 | Msa0947760:intron | 20.0% |
| !!! | TTTTCATAATTTTCAAAACG+TGG | + | chr6_3:30987458-30987477 | None:intergenic | 20.0% |
| !!! | TTAATTTAGTTGATTTTGGA+TGG | + | chr6_3:30987535-30987554 | None:intergenic | 20.0% |
| !!! | ATGGTTAATTTAGTTGATTT+TGG | + | chr6_3:30987539-30987558 | None:intergenic | 20.0% |
| !! | TAGTGTAATAGTGTTTATTA+GGG | - | chr6_3:30987687-30987706 | Msa0947760:intron | 20.0% |
| !! | ATGATTATGATTAATCAAAC+TGG | - | chr6_3:30987779-30987798 | Msa0947760:CDS | 20.0% |
| !!! | TTAATGATTGAGTTTGTTGT+TGG | + | chr6_3:30986911-30986930 | None:intergenic | 25.0% |
| ! | CAACCTAACAATAACAATAT+CGG | + | chr6_3:30987348-30987367 | None:intergenic | 25.0% |
| ! | GTAGTGTAATAGTGTTTATT+AGG | - | chr6_3:30987686-30987705 | Msa0947760:intron | 25.0% |
| !!! | TTAATTTGGTGAAGATGTTT+TGG | - | chr6_3:30987730-30987749 | Msa0947760:intron | 25.0% |
| !!! | TTGGTTTTGATTTTTTGTCT+TGG | - | chr6_3:30987749-30987768 | Msa0947760:intron | 25.0% |
| ! | GAAATAATGGTTTCAAATTG+CGG | - | chr6_3:30987920-30987939 | Msa0947760:CDS | 25.0% |
| ! | TTATATTTCAGTTGCAATTG+CGG | - | chr6_3:30988040-30988059 | Msa0947760:exon | 25.0% |
| !!! | TTAATGATTGAGTTTGTTGT+TGG | + | chr6_3:30986911-30986930 | None:intergenic | 25.0% |
| ! | CAACCTAACAATAACAATAT+CGG | + | chr6_3:30987348-30987367 | None:intergenic | 25.0% |
| ! | GTAGTGTAATAGTGTTTATT+AGG | - | chr6_3:30987686-30987705 | Msa0947760:intron | 25.0% |
| !!! | TTAATTTGGTGAAGATGTTT+TGG | - | chr6_3:30987730-30987749 | Msa0947760:intron | 25.0% |
| !!! | TTGGTTTTGATTTTTTGTCT+TGG | - | chr6_3:30987749-30987768 | Msa0947760:intron | 25.0% |
| ! | GAAATAATGGTTTCAAATTG+CGG | - | chr6_3:30987920-30987939 | Msa0947760:CDS | 25.0% |
| ! | TTATATTTCAGTTGCAATTG+CGG | - | chr6_3:30988040-30988059 | Msa0947760:exon | 25.0% |
| ATTCAGAACCTTTGTACTTT+AGG | - | chr6_3:30986743-30986762 | Msa0947760:intron | 30.0% | |
| ATCATCATACCTGAAAAAAC+TGG | - | chr6_3:30986857-30986876 | Msa0947760:intron | 30.0% | |
| !!! | TATTCCATTCCAGTTTTTTC+AGG | + | chr6_3:30986869-30986888 | None:intergenic | 30.0% |
| AACAATATCGGCATTCTTTA+GGG | + | chr6_3:30987336-30987355 | None:intergenic | 30.0% | |
| TAACAATATCGGCATTCTTT+AGG | + | chr6_3:30987337-30987356 | None:intergenic | 30.0% | |
| ! | ATGCCGATATTGTTATTGTT+AGG | - | chr6_3:30987342-30987361 | Msa0947760:intron | 30.0% |
| ! | CGATATTGTTATTGTTAGGT+TGG | - | chr6_3:30987346-30987365 | Msa0947760:intron | 30.0% |
| ! | TAGTTGTGTGTGTTAGTTTA+AGG | - | chr6_3:30987382-30987401 | Msa0947760:intron | 30.0% |
| TCAATTCACACTCAAAATTG+TGG | + | chr6_3:30987507-30987526 | None:intergenic | 30.0% | |
| GTTAATCACGTTCAAAAAGA+TGG | + | chr6_3:30987558-30987577 | None:intergenic | 30.0% | |
| TCGCAAATGTAAGGAAAAAT+GGG | - | chr6_3:30987584-30987603 | Msa0947760:intron | 30.0% | |
| AATAGTGTTTATTAGGGAAG+TGG | - | chr6_3:30987693-30987712 | Msa0947760:intron | 30.0% | |
| AACTGGTATTTATAGAAGAG+AGG | - | chr6_3:30987796-30987815 | Msa0947760:CDS | 30.0% | |
| CTGAATTGACCATTTATTGT+GGG | - | chr6_3:30987844-30987863 | Msa0947760:CDS | 30.0% | |
| TGAATTGACCATTTATTGTG+GGG | - | chr6_3:30987845-30987864 | Msa0947760:CDS | 30.0% | |
| AGATATATCCCCACAATAAA+TGG | + | chr6_3:30987856-30987875 | None:intergenic | 30.0% | |
| ! | TGTGGGGATATATCTATTTT+TGG | - | chr6_3:30987861-30987880 | Msa0947760:CDS | 30.0% |
| !!! | GGATATATCTATTTTTGGTG+AGG | - | chr6_3:30987866-30987885 | Msa0947760:CDS | 30.0% |
| AATTGAAATTTCGACTACAC+AGG | + | chr6_3:30987993-30988012 | None:intergenic | 30.0% | |
| TAGTCGAAATTTCAATTGTG+AGG | - | chr6_3:30987996-30988015 | Msa0947760:CDS | 30.0% | |
| !! | AGATACTATCGATTTCCTTA+TGG | + | chr6_3:30988129-30988148 | None:intergenic | 30.0% |
| ! | CGATAGTATCTTTTCTGTTA+TGG | - | chr6_3:30988138-30988157 | Msa0947760:five_prime_UTR | 30.0% |
| ATTCAGAACCTTTGTACTTT+AGG | - | chr6_3:30986743-30986762 | Msa0947760:intron | 30.0% | |
| ATCATCATACCTGAAAAAAC+TGG | - | chr6_3:30986857-30986876 | Msa0947760:intron | 30.0% | |
| !!! | TATTCCATTCCAGTTTTTTC+AGG | + | chr6_3:30986869-30986888 | None:intergenic | 30.0% |
| AACAATATCGGCATTCTTTA+GGG | + | chr6_3:30987336-30987355 | None:intergenic | 30.0% | |
| TAACAATATCGGCATTCTTT+AGG | + | chr6_3:30987337-30987356 | None:intergenic | 30.0% | |
| ! | ATGCCGATATTGTTATTGTT+AGG | - | chr6_3:30987342-30987361 | Msa0947760:intron | 30.0% |
| ! | CGATATTGTTATTGTTAGGT+TGG | - | chr6_3:30987346-30987365 | Msa0947760:intron | 30.0% |
| ! | TAGTTGTGTGTGTTAGTTTA+AGG | - | chr6_3:30987382-30987401 | Msa0947760:intron | 30.0% |
| TCAATTCACACTCAAAATTG+TGG | + | chr6_3:30987507-30987526 | None:intergenic | 30.0% | |
| GTTAATCACGTTCAAAAAGA+TGG | + | chr6_3:30987558-30987577 | None:intergenic | 30.0% | |
| TCGCAAATGTAAGGAAAAAT+GGG | - | chr6_3:30987584-30987603 | Msa0947760:intron | 30.0% | |
| AATAGTGTTTATTAGGGAAG+TGG | - | chr6_3:30987693-30987712 | Msa0947760:intron | 30.0% | |
| AACTGGTATTTATAGAAGAG+AGG | - | chr6_3:30987796-30987815 | Msa0947760:CDS | 30.0% | |
| CTGAATTGACCATTTATTGT+GGG | - | chr6_3:30987844-30987863 | Msa0947760:CDS | 30.0% | |
| TGAATTGACCATTTATTGTG+GGG | - | chr6_3:30987845-30987864 | Msa0947760:CDS | 30.0% | |
| AGATATATCCCCACAATAAA+TGG | + | chr6_3:30987856-30987875 | None:intergenic | 30.0% | |
| ! | TGTGGGGATATATCTATTTT+TGG | - | chr6_3:30987861-30987880 | Msa0947760:CDS | 30.0% |
| !!! | GGATATATCTATTTTTGGTG+AGG | - | chr6_3:30987866-30987885 | Msa0947760:CDS | 30.0% |
| AATTGAAATTTCGACTACAC+AGG | + | chr6_3:30987993-30988012 | None:intergenic | 30.0% | |
| TAGTCGAAATTTCAATTGTG+AGG | - | chr6_3:30987996-30988015 | Msa0947760:CDS | 30.0% | |
| !! | AGATACTATCGATTTCCTTA+TGG | + | chr6_3:30988129-30988148 | None:intergenic | 30.0% |
| ! | CGATAGTATCTTTTCTGTTA+TGG | - | chr6_3:30988138-30988157 | Msa0947760:five_prime_UTR | 30.0% |
| GAATCTCTCAGATTCTTTGT+TGG | + | chr6_3:30986831-30986850 | None:intergenic | 35.0% | |
| CATACCTGAAAAAACTGGAA+TGG | - | chr6_3:30986862-30986881 | Msa0947760:intron | 35.0% | |
| ATCATCAAGCAGTTTCTGTT+GGG | + | chr6_3:30986937-30986956 | None:intergenic | 35.0% | |
| !! | TACAGTTCCATTTTGAGAAG+TGG | + | chr6_3:30987000-30987019 | None:intergenic | 35.0% |
| TAACAGAAGGTCATGACATA+TGG | + | chr6_3:30987027-30987046 | None:intergenic | 35.0% | |
| ! | CTTTTTGAACGTGATTAACC+AGG | - | chr6_3:30987559-30987578 | Msa0947760:intron | 35.0% |
| GTCGCAAATGTAAGGAAAAA+TGG | - | chr6_3:30987583-30987602 | Msa0947760:intron | 35.0% | |
| GCTGAATTGACCATTTATTG+TGG | - | chr6_3:30987843-30987862 | Msa0947760:CDS | 35.0% | |
| GAACAACTATACCAGAAACT+TGG | + | chr6_3:30988103-30988122 | None:intergenic | 35.0% | |
| GTATAGTTGTTCTTGCCATA+AGG | - | chr6_3:30988111-30988130 | Msa0947760:five_prime_UTR | 35.0% | |
| GAATCTCTCAGATTCTTTGT+TGG | + | chr6_3:30986831-30986850 | None:intergenic | 35.0% | |
| CATACCTGAAAAAACTGGAA+TGG | - | chr6_3:30986862-30986881 | Msa0947760:intron | 35.0% | |
| ATCATCAAGCAGTTTCTGTT+GGG | + | chr6_3:30986937-30986956 | None:intergenic | 35.0% | |
| !! | TACAGTTCCATTTTGAGAAG+TGG | + | chr6_3:30987000-30987019 | None:intergenic | 35.0% |
| TAACAGAAGGTCATGACATA+TGG | + | chr6_3:30987027-30987046 | None:intergenic | 35.0% | |
| ! | CTTTTTGAACGTGATTAACC+AGG | - | chr6_3:30987559-30987578 | Msa0947760:intron | 35.0% |
| GTCGCAAATGTAAGGAAAAA+TGG | - | chr6_3:30987583-30987602 | Msa0947760:intron | 35.0% | |
| GCTGAATTGACCATTTATTG+TGG | - | chr6_3:30987843-30987862 | Msa0947760:CDS | 35.0% | |
| GAACAACTATACCAGAAACT+TGG | + | chr6_3:30988103-30988122 | None:intergenic | 35.0% | |
| GTATAGTTGTTCTTGCCATA+AGG | - | chr6_3:30988111-30988130 | Msa0947760:five_prime_UTR | 35.0% | |
| TTGAGAGAGAGATGCATCTA+TGG | - | chr6_3:30986805-30986824 | Msa0947760:intron | 40.0% | |
| CATCATCAAGCAGTTTCTGT+TGG | + | chr6_3:30986938-30986957 | None:intergenic | 40.0% | |
| GTTGACACCACTTCTCAAAA+TGG | - | chr6_3:30986990-30987009 | Msa0947760:intron | 40.0% | |
| AGCAAGAGAGAAGTAACAGA+AGG | + | chr6_3:30987040-30987059 | None:intergenic | 40.0% | |
| !! | TGTTACTGTTGTTTCTGCTG+TGG | - | chr6_3:30987059-30987078 | Msa0947760:intron | 40.0% |
| CCACATTTCCTGCATTATGA+AGG | + | chr6_3:30987970-30987989 | None:intergenic | 40.0% | |
| CCTTCATAATGCAGGAAATG+TGG | - | chr6_3:30987967-30987986 | Msa0947760:CDS | 40.0% | |
| !! | ACAGAAGTGTTCCAAGTTTC+TGG | - | chr6_3:30988089-30988108 | Msa0947760:five_prime_UTR | 40.0% |
| AGAACCTTACCTCTCAAACA+AGG | - | chr6_3:30988164-30988183 | Msa0947760:five_prime_UTR | 40.0% | |
| TTGAGAGAGAGATGCATCTA+TGG | - | chr6_3:30986805-30986824 | Msa0947760:intron | 40.0% | |
| CATCATCAAGCAGTTTCTGT+TGG | + | chr6_3:30986938-30986957 | None:intergenic | 40.0% | |
| GTTGACACCACTTCTCAAAA+TGG | - | chr6_3:30986990-30987009 | Msa0947760:intron | 40.0% | |
| AGCAAGAGAGAAGTAACAGA+AGG | + | chr6_3:30987040-30987059 | None:intergenic | 40.0% | |
| !! | TGTTACTGTTGTTTCTGCTG+TGG | - | chr6_3:30987059-30987078 | Msa0947760:intron | 40.0% |
| CCACATTTCCTGCATTATGA+AGG | + | chr6_3:30987970-30987989 | None:intergenic | 40.0% | |
| CCTTCATAATGCAGGAAATG+TGG | - | chr6_3:30987967-30987986 | Msa0947760:CDS | 40.0% | |
| !! | ACAGAAGTGTTCCAAGTTTC+TGG | - | chr6_3:30988089-30988108 | Msa0947760:five_prime_UTR | 40.0% |
| AGAACCTTACCTCTCAAACA+AGG | - | chr6_3:30988164-30988183 | Msa0947760:five_prime_UTR | 40.0% | |
| !! | TACTGTTGTTTCTGCTGTGG+CGG | - | chr6_3:30987062-30987081 | Msa0947760:intron | 45.0% |
| ! | AACCAGGTGTCGCAAATGTA+AGG | - | chr6_3:30987575-30987594 | Msa0947760:intron | 45.0% |
| TTCCTTACATTTGCGACACC+TGG | + | chr6_3:30987580-30987599 | None:intergenic | 45.0% | |
| CTTGCGAACCTTCATAATGC+AGG | - | chr6_3:30987959-30987978 | Msa0947760:CDS | 45.0% | |
| TTCAGTTGCAATTGCGGTGT+AGG | - | chr6_3:30988046-30988065 | Msa0947760:five_prime_UTR | 45.0% | |
| !! | AGAGCCTTGTTTGAGAGGTA+AGG | + | chr6_3:30988171-30988190 | None:intergenic | 45.0% |
| TACCTCTCAAACAAGGCTCT+AGG | - | chr6_3:30988171-30988190 | Msa0947760:five_prime_UTR | 45.0% | |
| ACCTCTCAAACAAGGCTCTA+GGG | - | chr6_3:30988172-30988191 | Msa0947760:five_prime_UTR | 45.0% | |
| !! | TACTGTTGTTTCTGCTGTGG+CGG | - | chr6_3:30987062-30987081 | Msa0947760:intron | 45.0% |
| ! | AACCAGGTGTCGCAAATGTA+AGG | - | chr6_3:30987575-30987594 | Msa0947760:intron | 45.0% |
| TTCCTTACATTTGCGACACC+TGG | + | chr6_3:30987580-30987599 | None:intergenic | 45.0% | |
| CTTGCGAACCTTCATAATGC+AGG | - | chr6_3:30987959-30987978 | Msa0947760:CDS | 45.0% | |
| TTCAGTTGCAATTGCGGTGT+AGG | - | chr6_3:30988046-30988065 | Msa0947760:five_prime_UTR | 45.0% | |
| !! | AGAGCCTTGTTTGAGAGGTA+AGG | + | chr6_3:30988171-30988190 | None:intergenic | 45.0% |
| TACCTCTCAAACAAGGCTCT+AGG | - | chr6_3:30988171-30988190 | Msa0947760:five_prime_UTR | 45.0% | |
| ACCTCTCAAACAAGGCTCTA+GGG | - | chr6_3:30988172-30988191 | Msa0947760:five_prime_UTR | 45.0% | |
| GAAGGTTCGCAAGTTAACCG+CGG | + | chr6_3:30987952-30987971 | None:intergenic | 50.0% | |
| !! | ACCCTAGAGCCTTGTTTGAG+AGG | + | chr6_3:30988176-30988195 | None:intergenic | 50.0% |
| GAAGGTTCGCAAGTTAACCG+CGG | + | chr6_3:30987952-30987971 | None:intergenic | 50.0% | |
| !! | ACCCTAGAGCCTTGTTTGAG+AGG | + | chr6_3:30988176-30988195 | None:intergenic | 50.0% |
| TCAAATTGCGGTTGCAGCCG+CGG | - | chr6_3:30987932-30987951 | Msa0947760:CDS | 55.0% | |
| TCAAATTGCGGTTGCAGCCG+CGG | - | chr6_3:30987932-30987951 | Msa0947760:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 30986653 | 30988203 | 30986653 | ID=Msa0947760;Name=Msa0947760 |
| chr6_3 | mRNA | 30986653 | 30988203 | 30986653 | ID=Msa0947760-mRNA-1;Parent=Msa0947760;Name=Msa0947760-mRNA-1;_AED=0.27;_eAED=0.27;_QI=163|0|0.5|0.5|0|0|2|0|101 |
| chr6_3 | exon | 30986653 | 30986690 | 30986653 | ID=Msa0947760-mRNA-1:exon:8191;Parent=Msa0947760-mRNA-1 |
| chr6_3 | exon | 30987773 | 30988203 | 30987773 | ID=Msa0947760-mRNA-1:exon:8190;Parent=Msa0947760-mRNA-1 |
| chr6_3 | five_prime_UTR | 30988041 | 30988203 | 30988041 | ID=Msa0947760-mRNA-1:five_prime_utr;Parent=Msa0947760-mRNA-1 |
| chr6_3 | CDS | 30987773 | 30988040 | 30987773 | ID=Msa0947760-mRNA-1:cds;Parent=Msa0947760-mRNA-1 |
| chr6_3 | CDS | 30986653 | 30986690 | 30986653 | ID=Msa0947760-mRNA-1:cds;Parent=Msa0947760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
