Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974630 | XP_003618501.3 | 98.312 | 237 | 4 | 0 | 1 | 237 | 1 | 237 | 5.80e-170 | 478 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974630 | sp|P0C8Q9|Y5902_ARATH | 51.515 | 99 | 45 | 2 | 139 | 237 | 150 | 245 | 1.52e-21 | 93.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974630 | A0A396HGN1 | 98.312 | 237 | 4 | 0 | 1 | 237 | 1 | 237 | 2.77e-170 | 478 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004840 | Msa0974630 | 0.817042 | 4.048651e-52 | -8.615850e-47 |
| Msa0010820 | Msa0974630 | 0.804002 | 2.661880e-49 | -8.615850e-47 |
| Msa0011170 | Msa0974630 | 0.810832 | 9.475217e-51 | -8.615850e-47 |
| Msa0015460 | Msa0974630 | 0.809645 | 1.708222e-50 | -8.615850e-47 |
| Msa0015480 | Msa0974630 | 0.823078 | 1.680626e-53 | -8.615850e-47 |
| Msa0025740 | Msa0974630 | 0.830816 | 2.372530e-55 | -8.615850e-47 |
| Msa0028660 | Msa0974630 | 0.809192 | 2.136938e-50 | -8.615850e-47 |
| Msa0029850 | Msa0974630 | 0.801603 | 8.329231e-49 | -8.615850e-47 |
| Msa0037880 | Msa0974630 | 0.824716 | 6.940958e-54 | -8.615850e-47 |
| Msa0043730 | Msa0974630 | 0.822347 | 2.487022e-53 | -8.615850e-47 |
| Msa0043980 | Msa0974630 | 0.817591 | 3.046593e-52 | -8.615850e-47 |
| Msa0051450 | Msa0974630 | 0.804321 | 2.285363e-49 | -8.615850e-47 |
| Msa0051860 | Msa0974630 | 0.817012 | 4.110811e-52 | -8.615850e-47 |
| Msa0051930 | Msa0974630 | 0.828383 | 9.266491e-55 | -8.615850e-47 |
| Msa0052030 | Msa0974630 | 0.804864 | 1.760472e-49 | -8.615850e-47 |
| Msa0054260 | Msa0974630 | 0.819435 | 1.163234e-52 | -8.615850e-47 |
| Msa0056030 | Msa0974630 | 0.821036 | 4.998578e-53 | -8.615850e-47 |
| Msa0073460 | Msa0974630 | 0.806727 | 7.146645e-50 | -8.615850e-47 |
| Msa0076320 | Msa0974630 | 0.804157 | 2.472217e-49 | -8.615850e-47 |
| Msa0077610 | Msa0974630 | 0.808275 | 3.354713e-50 | -8.615850e-47 |
| Msa0077670 | Msa0974630 | 0.810136 | 1.338862e-50 | -8.615850e-47 |
| Msa0078480 | Msa0974630 | 0.801504 | 8.727178e-49 | -8.615850e-47 |
| Msa0078610 | Msa0974630 | 0.802308 | 5.967709e-49 | -8.615850e-47 |
| Msa0085370 | Msa0974630 | 0.801922 | 7.162622e-49 | -8.615850e-47 |
| Msa0091570 | Msa0974630 | 0.800356 | 1.498026e-48 | -8.615850e-47 |
| Msa0096030 | Msa0974630 | 0.809774 | 1.602595e-50 | -8.615850e-47 |
| Msa0100090 | Msa0974630 | 0.838343 | 3.042120e-57 | -8.615850e-47 |
| Msa0101830 | Msa0974630 | 0.812922 | 3.321410e-51 | -8.615850e-47 |
| Msa0105700 | Msa0974630 | 0.807452 | 5.019638e-50 | -8.615850e-47 |
| Msa0109590 | Msa0974630 | 0.844862 | 5.812161e-59 | -8.615850e-47 |
| Msa0115270 | Msa0974630 | 0.814153 | 1.780865e-51 | -8.615850e-47 |
| Msa0115390 | Msa0974630 | 0.804238 | 2.377147e-49 | -8.615850e-47 |
| Msa0117770 | Msa0974630 | 0.808718 | 2.698311e-50 | -8.615850e-47 |
| Msa0608140 | Msa0974630 | 0.811877 | 5.620545e-51 | -8.615850e-47 |
| Msa0608160 | Msa0974630 | 0.828279 | 9.821213e-55 | -8.615850e-47 |
| Msa0608710 | Msa0974630 | 0.820489 | 6.675859e-53 | -8.615850e-47 |
| Msa0610130 | Msa0974630 | 0.804095 | 2.546579e-49 | -8.615850e-47 |
| Msa0613460 | Msa0974630 | 0.803465 | 3.441718e-49 | -8.615850e-47 |
| Msa0620960 | Msa0974630 | 0.803977 | 2.694181e-49 | -8.615850e-47 |
| Msa0621790 | Msa0974630 | 0.809175 | 2.154415e-50 | -8.615850e-47 |
| Msa0626990 | Msa0974630 | 0.817625 | 2.992801e-52 | -8.615850e-47 |
| Msa0627350 | Msa0974630 | 0.823628 | 1.250486e-53 | -8.615850e-47 |
| Msa0628740 | Msa0974630 | 0.807501 | 4.901051e-50 | -8.615850e-47 |
| Msa0641670 | Msa0974630 | 0.800591 | 1.341152e-48 | -8.615850e-47 |
| Msa0648080 | Msa0974630 | 0.824995 | 5.965836e-54 | -8.615850e-47 |
| Msa0649350 | Msa0974630 | 0.813981 | 1.943165e-51 | -8.615850e-47 |
| Msa0654010 | Msa0974630 | 0.827326 | 1.663867e-54 | -8.615850e-47 |
| Msa0654620 | Msa0974630 | 0.800089 | 1.697637e-48 | -8.615850e-47 |
| Msa0660300 | Msa0974630 | 0.828365 | 9.360939e-55 | -8.615850e-47 |
| Msa0663920 | Msa0974630 | 0.805271 | 1.446750e-49 | -8.615850e-47 |
| Msa0666140 | Msa0974630 | 0.807462 | 4.995435e-50 | -8.615850e-47 |
| Msa0673470 | Msa0974630 | 0.830552 | 2.753454e-55 | -8.615850e-47 |
| Msa0679550 | Msa0974630 | 0.828958 | 6.730403e-55 | -8.615850e-47 |
| Msa0683140 | Msa0974630 | 0.809895 | 1.509431e-50 | -8.615850e-47 |
| Msa0688480 | Msa0974630 | 0.800203 | 1.608926e-48 | -8.615850e-47 |
| Msa0689780 | Msa0974630 | 0.810632 | 1.046816e-50 | -8.615850e-47 |
| Msa0693380 | Msa0974630 | 0.823980 | 1.033992e-53 | -8.615850e-47 |
| Msa0703910 | Msa0974630 | 0.804424 | 2.174475e-49 | -8.615850e-47 |
| Msa0711100 | Msa0974630 | 0.834335 | 3.180726e-56 | -8.615850e-47 |
| Msa0715410 | Msa0974630 | 0.841311 | 5.132749e-58 | -8.615850e-47 |
| Msa0715470 | Msa0974630 | 0.803878 | 2.824969e-49 | -8.615850e-47 |
| Msa0731180 | Msa0974630 | 0.839000 | 2.057891e-57 | -8.615850e-47 |
| Msa0742150 | Msa0974630 | 0.807630 | 4.602912e-50 | -8.615850e-47 |
| Msa0748070 | Msa0974630 | 0.801355 | 9.363738e-49 | -8.615850e-47 |
| Msa0749440 | Msa0974630 | 0.822196 | 2.695305e-53 | -8.615850e-47 |
| Msa0750850 | Msa0974630 | 0.823977 | 1.035940e-53 | -8.615850e-47 |
| Msa0751850 | Msa0974630 | 0.819956 | 8.842442e-53 | -8.615850e-47 |
| Msa0765180 | Msa0974630 | 0.804767 | 1.844537e-49 | -8.615850e-47 |
| Msa0766090 | Msa0974630 | 0.810117 | 1.351820e-50 | -8.615850e-47 |
| Msa0771580 | Msa0974630 | 0.810313 | 1.226802e-50 | -8.615850e-47 |
| Msa0773310 | Msa0974630 | 0.801642 | 8.176090e-49 | -8.615850e-47 |
| Msa0793380 | Msa0974630 | 0.806377 | 8.473969e-50 | -8.615850e-47 |
| Msa0795720 | Msa0974630 | 0.813643 | 2.306640e-51 | -8.615850e-47 |
| Msa0807030 | Msa0974630 | 0.808565 | 2.909026e-50 | -8.615850e-47 |
| Msa0816590 | Msa0974630 | 0.816310 | 5.905592e-52 | -8.615850e-47 |
| Msa0817460 | Msa0974630 | 0.802801 | 4.721635e-49 | -8.615850e-47 |
| Msa0820850 | Msa0974630 | 0.804755 | 1.855051e-49 | -8.615850e-47 |
| Msa0831850 | Msa0974630 | 0.841360 | 4.982731e-58 | -8.615850e-47 |
| Msa0832150 | Msa0974630 | 0.828755 | 7.534935e-55 | -8.615850e-47 |
| Msa0833460 | Msa0974630 | 0.810805 | 9.604085e-51 | -8.615850e-47 |
| Msa0121620 | Msa0974630 | 0.805317 | 1.415454e-49 | -8.615850e-47 |
| Msa0124550 | Msa0974630 | 0.814920 | 1.204955e-51 | -8.615850e-47 |
| Msa0130520 | Msa0974630 | 0.845399 | 4.161682e-59 | -8.615850e-47 |
| Msa0137570 | Msa0974630 | 0.810791 | 9.667568e-51 | -8.615850e-47 |
| Msa0138020 | Msa0974630 | 0.842778 | 2.100751e-58 | -8.615850e-47 |
| Msa0152170 | Msa0974630 | 0.810948 | 8.943612e-51 | -8.615850e-47 |
| Msa0155340 | Msa0974630 | 0.817924 | 2.561552e-52 | -8.615850e-47 |
| Msa0165970 | Msa0974630 | 0.800720 | 1.262412e-48 | -8.615850e-47 |
| Msa0169820 | Msa0974630 | 0.805123 | 1.553730e-49 | -8.615850e-47 |
| Msa0172780 | Msa0974630 | 0.819558 | 1.090741e-52 | -8.615850e-47 |
| Msa0176330 | Msa0974630 | 0.804390 | 2.210936e-49 | -8.615850e-47 |
| Msa0178800 | Msa0974630 | 0.813439 | 2.558551e-51 | -8.615850e-47 |
| Msa0181730 | Msa0974630 | 0.814201 | 1.737934e-51 | -8.615850e-47 |
| Msa0182570 | Msa0974630 | 0.812561 | 3.985138e-51 | -8.615850e-47 |
| Msa0189030 | Msa0974630 | 0.800128 | 1.666396e-48 | -8.615850e-47 |
| Msa0197660 | Msa0974630 | 0.810079 | 1.377513e-50 | -8.615850e-47 |
| Msa0206010 | Msa0974630 | 0.806291 | 8.832584e-50 | -8.615850e-47 |
| Msa0216530 | Msa0974630 | 0.802116 | 6.535791e-49 | -8.615850e-47 |
| Msa0217680 | Msa0974630 | 0.851736 | 7.309089e-61 | -8.615850e-47 |
| Msa0218370 | Msa0974630 | 0.808210 | 3.464711e-50 | -8.615850e-47 |
| Msa0376910 | Msa0974630 | 0.809668 | 1.688641e-50 | -8.615850e-47 |
| Msa0385490 | Msa0974630 | 0.849690 | 2.749656e-60 | -8.615850e-47 |
| Msa0389810 | Msa0974630 | 0.817712 | 2.860285e-52 | -8.615850e-47 |
| Msa0394340 | Msa0974630 | 0.837153 | 6.148151e-57 | -8.615850e-47 |
| Msa0404030 | Msa0974630 | 0.827121 | 1.863398e-54 | -8.615850e-47 |
| Msa0412840 | Msa0974630 | 0.827940 | 1.185035e-54 | -8.615850e-47 |
| Msa0422010 | Msa0974630 | 0.804977 | 1.667002e-49 | -8.615850e-47 |
| Msa0429950 | Msa0974630 | 0.821513 | 3.879354e-53 | -8.615850e-47 |
| Msa0433530 | Msa0974630 | 0.806907 | 6.547756e-50 | -8.615850e-47 |
| Msa0434180 | Msa0974630 | 0.806062 | 9.869563e-50 | -8.615850e-47 |
| Msa0438040 | Msa0974630 | 0.804894 | 1.735052e-49 | -8.615850e-47 |
| Msa0442200 | Msa0974630 | 0.809557 | 1.784494e-50 | -8.615850e-47 |
| Msa0457510 | Msa0974630 | 0.806155 | 9.437741e-50 | -8.615850e-47 |
| Msa0460130 | Msa0974630 | 0.803921 | 2.767318e-49 | -8.615850e-47 |
| Msa0468130 | Msa0974630 | 0.819024 | 1.442979e-52 | -8.615850e-47 |
| Msa0471900 | Msa0974630 | 0.822830 | 1.919879e-53 | -8.615850e-47 |
| Msa0476460 | Msa0974630 | 0.803119 | 4.058955e-49 | -8.615850e-47 |
| Msa0477260 | Msa0974630 | 0.809275 | 2.050791e-50 | -8.615850e-47 |
| Msa0481280 | Msa0974630 | 0.818573 | 1.826795e-52 | -8.615850e-47 |
| Msa0239800 | Msa0974630 | 0.814168 | 1.767855e-51 | -8.615850e-47 |
| Msa0243480 | Msa0974630 | 0.812423 | 4.271549e-51 | -8.615850e-47 |
| Msa0256330 | Msa0974630 | 0.810445 | 1.148914e-50 | -8.615850e-47 |
| Msa0257500 | Msa0974630 | 0.866143 | 3.535740e-65 | -8.615850e-47 |
| Msa0265380 | Msa0974630 | 0.805985 | 1.024815e-49 | -8.615850e-47 |
| Msa0274350 | Msa0974630 | 0.814450 | 1.531065e-51 | -8.615850e-47 |
| Msa0287410 | Msa0974630 | 0.812261 | 4.633082e-51 | -8.615850e-47 |
| Msa0288100 | Msa0974630 | 0.803085 | 4.124305e-49 | -8.615850e-47 |
| Msa0295330 | Msa0974630 | 0.806552 | 7.782435e-50 | -8.615850e-47 |
| Msa0303360 | Msa0974630 | 0.821141 | 4.727381e-53 | -8.615850e-47 |
| Msa0305890 | Msa0974630 | 0.807613 | 4.641372e-50 | -8.615850e-47 |
| Msa0314250 | Msa0974630 | 0.816250 | 6.093587e-52 | -8.615850e-47 |
| Msa0317510 | Msa0974630 | 0.808842 | 2.539090e-50 | -8.615850e-47 |
| Msa0319170 | Msa0974630 | 0.816001 | 6.926596e-52 | -8.615850e-47 |
| Msa0319820 | Msa0974630 | 0.806635 | 7.476451e-50 | -8.615850e-47 |
| Msa0321080 | Msa0974630 | 0.813570 | 2.394371e-51 | -8.615850e-47 |
| Msa0326110 | Msa0974630 | 0.809268 | 2.057817e-50 | -8.615850e-47 |
| Msa0339620 | Msa0974630 | 0.817623 | 2.996049e-52 | -8.615850e-47 |
| Msa0340810 | Msa0974630 | 0.808208 | 3.467924e-50 | -8.615850e-47 |
| Msa0347610 | Msa0974630 | 0.811060 | 8.454625e-51 | -8.615850e-47 |
| Msa0357760 | Msa0974630 | 0.819221 | 1.301225e-52 | -8.615850e-47 |
| Msa0357790 | Msa0974630 | 0.823408 | 1.407321e-53 | -8.615850e-47 |
| Msa0357830 | Msa0974630 | 0.826294 | 2.935728e-54 | -8.615850e-47 |
| Msa0357840 | Msa0974630 | 0.817647 | 2.958964e-52 | -8.615850e-47 |
| Msa0357870 | Msa0974630 | 0.805605 | 1.231480e-49 | -8.615850e-47 |
| Msa0484780 | Msa0974630 | 0.834361 | 3.133284e-56 | -8.615850e-47 |
| Msa0488270 | Msa0974630 | 0.802158 | 6.406982e-49 | -8.615850e-47 |
| Msa0489610 | Msa0974630 | 0.840765 | 7.138461e-58 | -8.615850e-47 |
| Msa0500720 | Msa0974630 | 0.835783 | 1.372048e-56 | -8.615850e-47 |
| Msa0512750 | Msa0974630 | 0.817593 | 3.043296e-52 | -8.615850e-47 |
| Msa0518380 | Msa0974630 | 0.805122 | 1.554674e-49 | -8.615850e-47 |
| Msa0530100 | Msa0974630 | 0.821654 | 3.600060e-53 | -8.615850e-47 |
| Msa0530290 | Msa0974630 | 0.828689 | 7.818900e-55 | -8.615850e-47 |
| Msa0530650 | Msa0974630 | 0.816800 | 4.588783e-52 | -8.615850e-47 |
| Msa0532930 | Msa0974630 | 0.806244 | 9.039456e-50 | -8.615850e-47 |
| Msa0549780 | Msa0974630 | 0.819181 | 1.329065e-52 | -8.615850e-47 |
| Msa0558690 | Msa0974630 | 0.809407 | 1.921329e-50 | -8.615850e-47 |
| Msa0562440 | Msa0974630 | 0.856709 | 2.678892e-62 | -8.615850e-47 |
| Msa0580530 | Msa0974630 | 0.800560 | 1.361291e-48 | -8.615850e-47 |
| Msa0585230 | Msa0974630 | 0.805753 | 1.146442e-49 | -8.615850e-47 |
| Msa0587030 | Msa0974630 | 0.809099 | 2.236525e-50 | -8.615850e-47 |
| Msa0587190 | Msa0974630 | 0.822405 | 2.411114e-53 | -8.615850e-47 |
| Msa0588240 | Msa0974630 | 0.818814 | 1.610927e-52 | -8.615850e-47 |
| Msa0844110 | Msa0974630 | 0.808842 | 2.538430e-50 | -8.615850e-47 |
| Msa0860410 | Msa0974630 | 0.826794 | 2.230512e-54 | -8.615850e-47 |
| Msa0860570 | Msa0974630 | 0.810663 | 1.030523e-50 | -8.615850e-47 |
| Msa0860900 | Msa0974630 | -0.804798 | 1.817368e-49 | -8.615850e-47 |
| Msa0861130 | Msa0974630 | 0.809362 | 1.964954e-50 | -8.615850e-47 |
| Msa0861470 | Msa0974630 | 0.834739 | 2.517534e-56 | -8.615850e-47 |
| Msa0861570 | Msa0974630 | 0.837692 | 4.475196e-57 | -8.615850e-47 |
| Msa0869120 | Msa0974630 | 0.833143 | 6.315038e-56 | -8.615850e-47 |
| Msa0876360 | Msa0974630 | 0.829954 | 3.855222e-55 | -8.615850e-47 |
| Msa0876580 | Msa0974630 | 0.800729 | 1.257467e-48 | -8.615850e-47 |
| Msa0904640 | Msa0974630 | 0.800609 | 1.330260e-48 | -8.615850e-47 |
| Msa0909010 | Msa0974630 | 0.814685 | 1.358403e-51 | -8.615850e-47 |
| Msa0909110 | Msa0974630 | 0.810271 | 1.252222e-50 | -8.615850e-47 |
| Msa0935850 | Msa0974630 | 0.809862 | 1.534121e-50 | -8.615850e-47 |
| Msa0937330 | Msa0974630 | 0.920920 | 6.938249e-88 | -8.615850e-47 |
| Msa0944870 | Msa0974630 | 0.801628 | 8.230742e-49 | -8.615850e-47 |
| Msa0947760 | Msa0974630 | 0.808165 | 3.540679e-50 | -8.615850e-47 |
| Msa0958920 | Msa0974630 | 0.810830 | 9.484302e-51 | -8.615850e-47 |
| Msa0960740 | Msa0974630 | 0.813430 | 2.569993e-51 | -8.615850e-47 |
| Msa0974630 | Msa0978700 | 0.817997 | 2.465945e-52 | -8.615850e-47 |
| Msa0974630 | Msa0982270 | 0.816423 | 5.571589e-52 | -8.615850e-47 |
| Msa0974630 | Msa0992490 | -0.807272 | 5.479965e-50 | -8.615850e-47 |
| Msa0974630 | Msa1012830 | 0.822893 | 1.856726e-53 | -8.615850e-47 |
| Msa0974630 | Msa1021540 | 0.802353 | 5.840740e-49 | -8.615850e-47 |
| Msa0974630 | Msa1023180 | 0.815798 | 7.687046e-52 | -8.615850e-47 |
| Msa0974630 | Msa1026410 | 0.801044 | 1.083847e-48 | -8.615850e-47 |
| Msa0974630 | Msa1026640 | 0.804084 | 2.559549e-49 | -8.615850e-47 |
| Msa0974630 | Msa1027290 | 0.805185 | 1.508386e-49 | -8.615850e-47 |
| Msa0974630 | Msa1039880 | 0.805414 | 1.350333e-49 | -8.615850e-47 |
| Msa0974630 | Msa1043050 | 0.817319 | 3.508239e-52 | -8.615850e-47 |
| Msa0974630 | Msa1053260 | 0.803369 | 3.602368e-49 | -8.615850e-47 |
| Msa0974630 | Msa1071320 | 0.840815 | 6.927278e-58 | -8.615850e-47 |
| Msa0974630 | Msa1077340 | 0.807669 | 4.514509e-50 | -8.615850e-47 |
| Msa0974630 | Msa1081590 | 0.819235 | 1.291879e-52 | -8.615850e-47 |
| Msa0974630 | Msa1081790 | -0.818284 | 2.124151e-52 | -8.615850e-47 |
| Msa0974630 | Msa1082500 | 0.825772 | 3.907355e-54 | -8.615850e-47 |
| Msa0974630 | Msa1087990 | 0.807139 | 5.849500e-50 | -8.615850e-47 |
| Msa0974630 | Msa1092090 | 0.827215 | 1.769589e-54 | -8.615850e-47 |
| Msa0974630 | Msa1105500 | 0.807273 | 5.478282e-50 | -8.615850e-47 |
| Msa0974630 | Msa1107190 | 0.816902 | 4.352039e-52 | -8.615850e-47 |
| Msa0974630 | Msa1115280 | 0.802503 | 5.440869e-49 | -8.615850e-47 |
| Msa0974630 | Msa1129550 | 0.800976 | 1.119429e-48 | -8.615850e-47 |
| Msa0974630 | Msa1135880 | 0.806615 | 7.546723e-50 | -8.615850e-47 |
| Msa0974630 | Msa1144040 | 0.807928 | 3.977367e-50 | -8.615850e-47 |
| Msa0974630 | Msa1144970 | 0.815152 | 1.070036e-51 | -8.615850e-47 |
| Msa0974630 | Msa1150710 | 0.816642 | 4.977177e-52 | -8.615850e-47 |
| Msa0974630 | Msa1151710 | 0.814783 | 1.291885e-51 | -8.615850e-47 |
| Msa0974630 | Msa1166090 | -0.811277 | 7.587889e-51 | -8.615850e-47 |
| Msa0974630 | Msa1174040 | 0.809058 | 2.282129e-50 | -8.615850e-47 |
| Msa0974630 | Msa1176360 | 0.823799 | 1.140395e-53 | -8.615850e-47 |
| Msa0974630 | Msa1176710 | 0.803532 | 3.333386e-49 | -8.615850e-47 |
| Msa0974630 | Msa1180500 | 0.815077 | 1.111830e-51 | -8.615850e-47 |
| Msa0974630 | Msa1182690 | 0.825693 | 4.078880e-54 | -8.615850e-47 |
| Msa0974630 | Msa1211150 | -0.800306 | 1.533372e-48 | -8.615850e-47 |
| Msa0974630 | Msa1231840 | 0.818434 | 1.963797e-52 | -8.615850e-47 |
| Msa0974630 | Msa1233500 | 0.836906 | 7.108261e-57 | -8.615850e-47 |
| Msa0974630 | Msa1233890 | 0.804539 | 2.057798e-49 | -8.615850e-47 |
| Msa0974630 | Msa1257130 | 0.827606 | 1.425929e-54 | -8.615850e-47 |
| Msa0974630 | Msa1259590 | -0.802725 | 4.896323e-49 | -8.615850e-47 |
| Msa0974630 | Msa1270660 | 0.819834 | 9.431594e-53 | -8.615850e-47 |
| Msa0974630 | Msa1270730 | 0.803783 | 2.955960e-49 | -8.615850e-47 |
| Msa0974630 | Msa1272570 | 0.830805 | 2.388328e-55 | -8.615850e-47 |
| Msa0974630 | Msa1276440 | 0.847329 | 1.239121e-59 | -8.615850e-47 |
| Msa0974630 | Msa1280320 | 0.801462 | 8.901073e-49 | -8.615850e-47 |
| Msa0974630 | Msa1305200 | 0.811260 | 7.652617e-51 | -8.615850e-47 |
| Msa0974630 | Msa1305350 | 0.828571 | 8.351364e-55 | -8.615850e-47 |
| Msa0974630 | Msa1306750 | 0.843585 | 1.280409e-58 | -8.615850e-47 |
| Msa0974630 | Msa1307550 | 0.804887 | 1.740524e-49 | -8.615850e-47 |
| Msa0974630 | Msa1307740 | 0.819118 | 1.373301e-52 | -8.615850e-47 |
| Msa0974630 | Msa1312520 | 0.812890 | 3.375665e-51 | -8.615850e-47 |
| Msa0974630 | Msa1333990 | 0.801738 | 7.813735e-49 | -8.615850e-47 |
| Msa0974630 | Msa1335710 | 0.801945 | 7.086214e-49 | -8.615850e-47 |
| Msa0974630 | Msa1340270 | 0.800870 | 1.176830e-48 | -8.615850e-47 |
| Msa0974630 | Msa1348560 | 0.803481 | 3.414941e-49 | -8.615850e-47 |
| Msa0974630 | Msa1348600 | 0.808084 | 3.684333e-50 | -8.615850e-47 |
| Msa0974630 | Msa1355890 | 0.832696 | 8.159519e-56 | -8.615850e-47 |
| Msa0974630 | Msa1362880 | 0.812807 | 3.521217e-51 | -8.615850e-47 |
| Msa0974630 | Msa1364370 | 0.807780 | 4.277026e-50 | -8.615850e-47 |
| Msa0974630 | Msa1371940 | 0.825653 | 4.168677e-54 | -8.615850e-47 |
| Msa0974630 | Msa1388860 | 0.824178 | 9.290372e-54 | -8.615850e-47 |
| Msa0974630 | Msa1389400 | 0.803487 | 3.406127e-49 | -8.615850e-47 |
| Msa0974630 | Msa1396400 | -0.809968 | 1.455304e-50 | -8.615850e-47 |
| Msa0974630 | Msa1396830 | 0.807067 | 6.058267e-50 | -8.615850e-47 |
| Msa0974630 | Msa1397120 | 0.813640 | 2.310790e-51 | -8.615850e-47 |
| Msa0974630 | Msa1403340 | 0.800191 | 1.617968e-48 | -8.615850e-47 |
| Msa0974630 | Msa1403480 | 0.814175 | 1.761252e-51 | -8.615850e-47 |
| Msa0974630 | Msa1403890 | 0.801788 | 7.633396e-49 | -8.615850e-47 |
| Msa0974630 | Msa1407470 | 0.803184 | 3.935469e-49 | -8.615850e-47 |
| Msa0974630 | Msa1412890 | 0.826996 | 1.995995e-54 | -8.615850e-47 |
| Msa0974630 | Msa1420270 | 0.811852 | 5.690445e-51 | -8.615850e-47 |
| Msa0974630 | Msa1424680 | 0.807882 | 4.068410e-50 | -8.615850e-47 |
| Msa0974630 | Msa1427230 | 0.816405 | 5.626133e-52 | -8.615850e-47 |
| Msa0974630 | Msa1437130 | 0.801748 | 7.778369e-49 | -8.615850e-47 |
| Msa0974630 | Msa1438700 | 0.819374 | 1.201320e-52 | -8.615850e-47 |
| Msa0974630 | Msa1443060 | 0.801464 | 8.894736e-49 | -8.615850e-47 |
| Msa0974630 | Msa1444740 | 0.824279 | 8.797511e-54 | -8.615850e-47 |
| Msa0974630 | Msa1448630 | 0.817798 | 2.734881e-52 | -8.615850e-47 |
| Msa0974630 | Msa1455490 | 0.805891 | 1.072437e-49 | -8.615850e-47 |
| Msa0974630 | Msa1460830 | 0.820253 | 7.563297e-53 | -8.615850e-47 |
| Msa0974630 | Msa1462290 | 0.802203 | 6.270826e-49 | -8.615850e-47 |
| Msa0974630 | Msa1462930 | 0.825517 | 4.488648e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974630 | MtrunA17_Chr6g0453281 | 98.312 | 237 | 4 | 0 | 1 | 237 | 1 | 237 | 5.33e-174 | 478 |
| Msa0974630 | MtrunA17_Chr7g0217561 | 61.603 | 237 | 71 | 3 | 1 | 237 | 1 | 217 | 3.74e-87 | 257 |
| Msa0974630 | MtrunA17_Chr2g0287451 | 39.516 | 124 | 62 | 4 | 114 | 234 | 79 | 192 | 2.35e-14 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974630 | AT3G01170.1 | 55.000 | 240 | 80 | 5 | 1 | 237 | 1 | 215 | 4.89e-83 | 247 |
| Msa0974630 | AT5G15260.2 | 55.691 | 246 | 88 | 9 | 1 | 237 | 1 | 234 | 2.06e-74 | 226 |
| Msa0974630 | AT5G15260.1 | 55.691 | 246 | 88 | 9 | 1 | 237 | 1 | 234 | 2.06e-74 | 226 |
| Msa0974630 | AT3G06180.1 | 40.000 | 165 | 94 | 3 | 75 | 237 | 66 | 227 | 5.97e-23 | 93.6 |
| Msa0974630 | AT5G19025.1 | 51.515 | 99 | 45 | 2 | 139 | 237 | 150 | 245 | 1.55e-22 | 93.2 |
| Msa0974630 | AT5G19025.2 | 50.526 | 95 | 45 | 1 | 139 | 233 | 150 | 242 | 3.33e-22 | 92.4 |
| Msa0974630 | AT3G01170.2 | 43.220 | 118 | 48 | 3 | 1 | 116 | 1 | 101 | 2.22e-21 | 87.4 |
Find 45 sgRNAs with CRISPR-Local
Find 47 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTATATTTATATATCTAT+TGG | 0.238022 | 6_4:-7821728 | Msa0974630:CDS |
| GTCATTTCAGATTATGAGTA+TGG | 0.244984 | 6_4:-7821786 | Msa0974630:CDS |
| TAACAGAATTTGATAAACTA+TGG | 0.289659 | 6_4:+7821924 | None:intergenic |
| TGTTGGTAGGTTAGAAGTTC+CGG | 0.289963 | 6_4:-7821411 | Msa0974630:CDS |
| AAGAAGATGGCACCGATTAA+TGG | 0.325801 | 6_4:-7821473 | Msa0974630:CDS |
| CCAATAGATATATAAATATA+AGG | 0.341548 | 6_4:+7821728 | None:intergenic |
| ATGGCGAATTCGATCGAATT+CGG | 0.378268 | 6_4:-7822001 | Msa0974630:CDS |
| TTTGTGCTGCATTGGCTACA+TGG | 0.387252 | 6_4:-7821694 | Msa0974630:CDS |
| TTCTTCAAACCCTTACAATT+CGG | 0.389737 | 6_4:+7821635 | None:intergenic |
| CGAAGTTTCTTCGTCGGTCC+CGG | 0.401109 | 6_4:+7821392 | None:intergenic |
| GTTGGTAGGTTAGAAGTTCC+GGG | 0.404512 | 6_4:-7821410 | Msa0974630:CDS |
| ATCACTAAAAGTTCAACATA+AGG | 0.412821 | 6_4:+7821812 | None:intergenic |
| CTAATCAATTTCAAAGGAAT+AGG | 0.420647 | 6_4:-7821952 | Msa0974630:CDS |
| ATGTGGTAATCCGAATTGTA+AGG | 0.420695 | 6_4:-7821645 | Msa0974630:CDS |
| GATGGCGGTGTTTGTAAGAA+GGG | 0.429289 | 6_4:-7821545 | Msa0974630:CDS |
| AGCACAGCTCTTCCATTAAT+CGG | 0.433317 | 6_4:+7821461 | None:intergenic |
| ATTGCTGTTGTTATTGCTTG+TGG | 0.436635 | 6_4:-7821848 | Msa0974630:CDS |
| AGATGGCGGTGTTTGTAAGA+AGG | 0.445969 | 6_4:-7821546 | Msa0974630:CDS |
| CTGTGCTTGTGCTGAGAGCT+AGG | 0.461752 | 6_4:-7821445 | Msa0974630:CDS |
| GGTGTGGTTGTTCTGTTGGT+AGG | 0.475981 | 6_4:-7821424 | Msa0974630:CDS |
| GCTAGGTGTGGTTGTTCTGT+TGG | 0.477365 | 6_4:-7821428 | Msa0974630:CDS |
| TTCGCCATGGATGATTGAAC+TGG | 0.483771 | 6_4:+7822016 | None:intergenic |
| ATCTTCCGAAGTTTCTTCGT+CGG | 0.488611 | 6_4:+7821386 | None:intergenic |
| TCACTAAAAGTTCAACATAA+GGG | 0.493997 | 6_4:+7821813 | None:intergenic |
| TTGTGCTGCATTGGCTACAT+GGG | 0.507240 | 6_4:-7821693 | Msa0974630:CDS |
| ATCAATTTCAAAGGAATAGG+AGG | 0.510788 | 6_4:-7821949 | Msa0974630:CDS |
| AAGTGTTGTTTGTGCTGCAT+TGG | 0.523765 | 6_4:-7821702 | Msa0974630:CDS |
| ACTTCGGAAGATCAAGAAGT+AGG | 0.555452 | 6_4:-7821375 | None:intergenic |
| AGCAAACTAATCAATTTCAA+AGG | 0.564372 | 6_4:-7821958 | Msa0974630:CDS |
| TGTGGTAATCCGAATTGTAA+GGG | 0.569597 | 6_4:-7821644 | Msa0974630:CDS |
| TGAAGCGGAGCTTAAGAAGA+TGG | 0.571103 | 6_4:-7821486 | Msa0974630:CDS |
| TACAAAGAGAGATTGAGCTA+TGG | 0.571615 | 6_4:+7822056 | None:intergenic |
| ATTGCCGCGTGATCATCATA+AGG | 0.580739 | 6_4:-7821513 | Msa0974630:CDS |
| ACCTCCAGTTCAATCATCCA+TGG | 0.585489 | 6_4:-7822020 | Msa0974630:CDS |
| CCGCCATCTTTCACAAAAGA+CGG | 0.590770 | 6_4:+7821560 | None:intergenic |
| GTTTGCACAAGTAACAAATG+TGG | 0.622560 | 6_4:-7821662 | Msa0974630:CDS |
| TCATCATAAGGAACTTGAAG+CGG | 0.636755 | 6_4:-7821501 | Msa0974630:CDS |
| CGGGACCGACGAAGAAACTT+CGG | 0.636873 | 6_4:-7821391 | Msa0974630:CDS |
| GCCATGGATGATTGAACTGG+AGG | 0.647249 | 6_4:+7822019 | None:intergenic |
| GAATTCGATCGAATTCGCCA+TGG | 0.649026 | 6_4:+7822003 | None:intergenic |
| TGTGCTGCATTGGCTACATG+GGG | 0.654737 | 6_4:-7821692 | Msa0974630:CDS |
| CTTGTGCTGAGAGCTAGGTG+TGG | 0.697858 | 6_4:-7821440 | Msa0974630:CDS |
| GCTGATCTAGATCGATCACA+AGG | 0.698983 | 6_4:+7821893 | None:intergenic |
| GATCTAGATCGATCACAAGG+TGG | 0.717259 | 6_4:+7821896 | None:intergenic |
| AGTTCCTTATGATGATCACG+CGG | 0.724998 | 6_4:+7821509 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CCAATAGATATATAAATATA+AGG | + | chr6_4:7821718-7821737 | None:intergenic | 15.0% |
| !! | CCTTATATTTATATATCTAT+TGG | - | chr6_4:7821715-7821734 | Msa0974630:CDS | 15.0% |
| !! | TAACAGAATTTGATAAACTA+TGG | + | chr6_4:7821522-7821541 | None:intergenic | 20.0% |
| ! | AGCAAACTAATCAATTTCAA+AGG | - | chr6_4:7821485-7821504 | Msa0974630:CDS | 25.0% |
| ! | CTAATCAATTTCAAAGGAAT+AGG | - | chr6_4:7821491-7821510 | Msa0974630:CDS | 25.0% |
| ! | TCACTAAAAGTTCAACATAA+GGG | + | chr6_4:7821633-7821652 | None:intergenic | 25.0% |
| ! | ATCACTAAAAGTTCAACATA+AGG | + | chr6_4:7821634-7821653 | None:intergenic | 25.0% |
| !!! | TATGGTGTGTTTTTTGATTA+TGG | - | chr6_4:7821675-7821694 | Msa0974630:CDS | 25.0% |
| ATCAATTTCAAAGGAATAGG+AGG | - | chr6_4:7821494-7821513 | Msa0974630:CDS | 30.0% | |
| GTCATTTCAGATTATGAGTA+TGG | - | chr6_4:7821657-7821676 | Msa0974630:CDS | 30.0% | |
| TTCTTCAAACCCTTACAATT+CGG | + | chr6_4:7821811-7821830 | None:intergenic | 30.0% | |
| TACAAAGAGAGATTGAGCTA+TGG | + | chr6_4:7821390-7821409 | None:intergenic | 35.0% | |
| ! | ATTGCTGTTGTTATTGCTTG+TGG | - | chr6_4:7821595-7821614 | Msa0974630:CDS | 35.0% |
| GTTTGCACAAGTAACAAATG+TGG | - | chr6_4:7821781-7821800 | Msa0974630:CDS | 35.0% | |
| ATGTGGTAATCCGAATTGTA+AGG | - | chr6_4:7821798-7821817 | Msa0974630:CDS | 35.0% | |
| TGTGGTAATCCGAATTGTAA+GGG | - | chr6_4:7821799-7821818 | Msa0974630:CDS | 35.0% | |
| TCATCATAAGGAACTTGAAG+CGG | - | chr6_4:7821942-7821961 | Msa0974630:CDS | 35.0% | |
| ATGGCGAATTCGATCGAATT+CGG | - | chr6_4:7821442-7821461 | Msa0974630:CDS | 40.0% | |
| !! | AAGTGTTGTTTGTGCTGCAT+TGG | - | chr6_4:7821741-7821760 | Msa0974630:CDS | 40.0% |
| ! | TCACCGTCTTTTGTGAAAGA+TGG | - | chr6_4:7821880-7821899 | Msa0974630:CDS | 40.0% |
| AGTTCCTTATGATGATCACG+CGG | + | chr6_4:7821937-7821956 | None:intergenic | 40.0% | |
| !! | AAGAAGATGGCACCGATTAA+TGG | - | chr6_4:7821970-7821989 | Msa0974630:CDS | 40.0% |
| AGCACAGCTCTTCCATTAAT+CGG | + | chr6_4:7821985-7822004 | None:intergenic | 40.0% | |
| ! | TGTTGGTAGGTTAGAAGTTC+CGG | - | chr6_4:7822032-7822051 | Msa0974630:CDS | 40.0% |
| ATCTTCCGAAGTTTCTTCGT+CGG | + | chr6_4:7822060-7822079 | None:intergenic | 40.0% | |
| ACCTCCAGTTCAATCATCCA+TGG | - | chr6_4:7821423-7821442 | Msa0974630:CDS | 45.0% | |
| TTCGCCATGGATGATTGAAC+TGG | + | chr6_4:7821430-7821449 | None:intergenic | 45.0% | |
| GAATTCGATCGAATTCGCCA+TGG | + | chr6_4:7821443-7821462 | None:intergenic | 45.0% | |
| GATCTAGATCGATCACAAGG+TGG | + | chr6_4:7821550-7821569 | None:intergenic | 45.0% | |
| GCTGATCTAGATCGATCACA+AGG | + | chr6_4:7821553-7821572 | None:intergenic | 45.0% | |
| !! | TTTGTGCTGCATTGGCTACA+TGG | - | chr6_4:7821749-7821768 | Msa0974630:CDS | 45.0% |
| !! | TTGTGCTGCATTGGCTACAT+GGG | - | chr6_4:7821750-7821769 | Msa0974630:CDS | 45.0% |
| CCGCCATCTTTCACAAAAGA+CGG | + | chr6_4:7821886-7821905 | None:intergenic | 45.0% | |
| ! | CCGTCTTTTGTGAAAGATGG+CGG | - | chr6_4:7821883-7821902 | Msa0974630:CDS | 45.0% |
| ! | AGATGGCGGTGTTTGTAAGA+AGG | - | chr6_4:7821897-7821916 | Msa0974630:CDS | 45.0% |
| ! | GATGGCGGTGTTTGTAAGAA+GGG | - | chr6_4:7821898-7821917 | Msa0974630:CDS | 45.0% |
| ATTGCCGCGTGATCATCATA+AGG | - | chr6_4:7821930-7821949 | Msa0974630:CDS | 45.0% | |
| TGAAGCGGAGCTTAAGAAGA+TGG | - | chr6_4:7821957-7821976 | Msa0974630:CDS | 45.0% | |
| ! | GTTGGTAGGTTAGAAGTTCC+GGG | - | chr6_4:7822033-7822052 | Msa0974630:CDS | 45.0% |
| GCCATGGATGATTGAACTGG+AGG | + | chr6_4:7821427-7821446 | None:intergenic | 50.0% | |
| !! | TGTGCTGCATTGGCTACATG+GGG | - | chr6_4:7821751-7821770 | Msa0974630:CDS | 50.0% |
| GCTAGGTGTGGTTGTTCTGT+TGG | - | chr6_4:7822015-7822034 | Msa0974630:CDS | 50.0% | |
| GGTGTGGTTGTTCTGTTGGT+AGG | - | chr6_4:7822019-7822038 | Msa0974630:CDS | 50.0% | |
| CTGTGCTTGTGCTGAGAGCT+AGG | - | chr6_4:7821998-7822017 | Msa0974630:CDS | 55.0% | |
| CTTGTGCTGAGAGCTAGGTG+TGG | - | chr6_4:7822003-7822022 | Msa0974630:CDS | 55.0% | |
| CGAAGTTTCTTCGTCGGTCC+CGG | + | chr6_4:7822054-7822073 | None:intergenic | 55.0% | |
| CGGGACCGACGAAGAAACTT+CGG | - | chr6_4:7822052-7822071 | Msa0974630:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 7821376 | 7822089 | 7821376 | ID=Msa0974630;Name=Msa0974630 |
| chr6_4 | mRNA | 7821376 | 7822089 | 7821376 | ID=Msa0974630-mRNA-1;Parent=Msa0974630;Name=Msa0974630-mRNA-1;_AED=0.16;_eAED=0.17;_QI=0|-1|0|1|-1|1|1|0|237 |
| chr6_4 | exon | 7821376 | 7822089 | 7821376 | ID=Msa0974630-mRNA-1:exon:2961;Parent=Msa0974630-mRNA-1 |
| chr6_4 | CDS | 7821376 | 7822089 | 7821376 | ID=Msa0974630-mRNA-1:cds;Parent=Msa0974630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
