Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0651930 | RDY10666.1 | 59.167 | 120 | 15 | 1 | 25 | 144 | 129 | 214 | 4.54e-37 | 136 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0651930 | sp|O81153|PSB3B_ARATH | 59.341 | 91 | 3 | 1 | 25 | 115 | 129 | 185 | 6.37e-26 | 100 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0651930 | A0A371I6J2 | 59.167 | 120 | 15 | 1 | 25 | 144 | 129 | 214 | 2.17e-37 | 136 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010490 | Msa0651930 | 0.818219 | 2.197184e-52 | -8.615850e-47 |
| Msa0010500 | Msa0651930 | 0.844082 | 9.421777e-59 | -8.615850e-47 |
| Msa0020390 | Msa0651930 | 0.811423 | 7.053537e-51 | -8.615850e-47 |
| Msa0029260 | Msa0651930 | 0.816576 | 5.148917e-52 | -8.615850e-47 |
| Msa0037840 | Msa0651930 | 0.820675 | 6.051680e-53 | -8.615850e-47 |
| Msa0052300 | Msa0651930 | -0.801308 | 9.572874e-49 | -8.615850e-47 |
| Msa0052350 | Msa0651930 | -0.813124 | 2.999554e-51 | -8.615850e-47 |
| Msa0055150 | Msa0651930 | 0.812484 | 4.141485e-51 | -8.615850e-47 |
| Msa0059950 | Msa0651930 | 0.804274 | 2.337148e-49 | -8.615850e-47 |
| Msa0082680 | Msa0651930 | -0.800365 | 1.491583e-48 | -8.615850e-47 |
| Msa0097360 | Msa0651930 | -0.822510 | 2.279562e-53 | -8.615850e-47 |
| Msa0607690 | Msa0651930 | 0.814032 | 1.893593e-51 | -8.615850e-47 |
| Msa0609000 | Msa0651930 | 0.833992 | 3.876834e-56 | -8.615850e-47 |
| Msa0618930 | Msa0651930 | 0.800130 | 1.664922e-48 | -8.615850e-47 |
| Msa0631350 | Msa0651930 | 0.803730 | 3.032562e-49 | -8.615850e-47 |
| Msa0651930 | Msa0659140 | 0.818537 | 1.861409e-52 | -8.615850e-47 |
| Msa0651930 | Msa0661710 | 0.824792 | 6.661930e-54 | -8.615850e-47 |
| Msa0651930 | Msa0705600 | 0.820930 | 5.286494e-53 | -8.615850e-47 |
| Msa0651930 | Msa0719420 | 0.808280 | 3.347115e-50 | -8.615850e-47 |
| Msa0651930 | Msa0743990 | 0.803772 | 2.972553e-49 | -8.615850e-47 |
| Msa0651930 | Msa0789680 | 0.808320 | 3.281546e-50 | -8.615850e-47 |
| Msa0651930 | Msa0794050 | 0.806599 | 7.606803e-50 | -8.615850e-47 |
| Msa0651930 | Msa0800370 | 0.805945 | 1.044503e-49 | -8.615850e-47 |
| Msa0651930 | Msa0802410 | 0.805162 | 1.525136e-49 | -8.615850e-47 |
| Msa0651930 | Msa0852720 | 0.803132 | 4.033455e-49 | -8.615850e-47 |
| Msa0651930 | Msa0859320 | 0.802784 | 4.759627e-49 | -8.615850e-47 |
| Msa0651930 | Msa0864290 | 0.802147 | 6.440324e-49 | -8.615850e-47 |
| Msa0651930 | Msa0879860 | 0.804719 | 1.887703e-49 | -8.615850e-47 |
| Msa0651930 | Msa0966010 | 0.849857 | 2.469923e-60 | -8.615850e-47 |
| Msa0651930 | Msa1006910 | -0.801458 | 8.919614e-49 | -8.615850e-47 |
| Msa0651930 | Msa1025260 | 0.839674 | 1.376094e-57 | -8.615850e-47 |
| Msa0651930 | Msa1029970 | 0.801910 | 7.204137e-49 | -8.615850e-47 |
| Msa0651930 | Msa1077030 | 0.807229 | 5.597373e-50 | -8.615850e-47 |
| Msa0651930 | Msa1096620 | 0.805210 | 1.490399e-49 | -8.615850e-47 |
| Msa0651930 | Msa1109350 | 0.834876 | 2.325342e-56 | -8.615850e-47 |
| Msa0651930 | Msa1120810 | 0.835941 | 1.251779e-56 | -8.615850e-47 |
| Msa0651930 | Msa1133230 | 0.818561 | 1.837888e-52 | -8.615850e-47 |
| Msa0651930 | Msa1133250 | 0.820797 | 5.673179e-53 | -8.615850e-47 |
| Msa0651930 | Msa1135800 | -0.818820 | 1.605909e-52 | -8.615850e-47 |
| Msa0651930 | Msa1135810 | -0.800795 | 1.218514e-48 | -8.615850e-47 |
| Msa0651930 | Msa1138870 | 0.813865 | 2.061285e-51 | -8.615850e-47 |
| Msa0651930 | Msa1166870 | 0.804853 | 1.769452e-49 | -8.615850e-47 |
| Msa0651930 | Msa1200320 | 0.804749 | 1.860469e-49 | -8.615850e-47 |
| Msa0651930 | Msa1253810 | 0.803047 | 4.200521e-49 | -8.615850e-47 |
| Msa0651930 | Msa1296830 | 0.808657 | 2.780955e-50 | -8.615850e-47 |
| Msa0651930 | Msa1336560 | 0.806469 | 8.101644e-50 | -8.615850e-47 |
| Msa0651930 | Msa1381480 | 0.801862 | 7.369064e-49 | -8.615850e-47 |
| Msa0651930 | Msa1418960 | -0.816493 | 5.374445e-52 | -8.615850e-47 |
| Msa0651930 | Msa1436520 | 0.829185 | 5.929853e-55 | -8.615850e-47 |
| Msa0121820 | Msa0651930 | 0.809176 | 2.153618e-50 | -8.615850e-47 |
| Msa0129190 | Msa0651930 | -0.801117 | 1.047642e-48 | -8.615850e-47 |
| Msa0131450 | Msa0651930 | 0.805847 | 1.095368e-49 | -8.615850e-47 |
| Msa0169300 | Msa0651930 | 0.813364 | 2.657778e-51 | -8.615850e-47 |
| Msa0183460 | Msa0651930 | 0.808648 | 2.793042e-50 | -8.615850e-47 |
| Msa0186310 | Msa0651930 | 0.830336 | 3.110197e-55 | -8.615850e-47 |
| Msa0189520 | Msa0651930 | 0.812539 | 4.030293e-51 | -8.615850e-47 |
| Msa0231660 | Msa0651930 | 0.804352 | 2.251649e-49 | -8.615850e-47 |
| Msa0231790 | Msa0651930 | 0.805893 | 1.071382e-49 | -8.615850e-47 |
| Msa0365860 | Msa0651930 | 0.806973 | 6.342638e-50 | -8.615850e-47 |
| Msa0380100 | Msa0651930 | 0.809214 | 2.113835e-50 | -8.615850e-47 |
| Msa0384880 | Msa0651930 | 0.818541 | 1.857328e-52 | -8.615850e-47 |
| Msa0386040 | Msa0651930 | 0.801654 | 8.129536e-49 | -8.615850e-47 |
| Msa0419520 | Msa0651930 | 0.822743 | 2.012139e-53 | -8.615850e-47 |
| Msa0439890 | Msa0651930 | 0.800420 | 1.453320e-48 | -8.615850e-47 |
| Msa0271360 | Msa0651930 | 0.811361 | 7.277384e-51 | -8.615850e-47 |
| Msa0271890 | Msa0651930 | 0.800263 | 1.564640e-48 | -8.615850e-47 |
| Msa0304590 | Msa0651930 | 0.802295 | 6.002375e-49 | -8.615850e-47 |
| Msa0304660 | Msa0651930 | 0.811642 | 6.321784e-51 | -8.615850e-47 |
| Msa0310860 | Msa0651930 | 0.802765 | 4.802564e-49 | -8.615850e-47 |
| Msa0327140 | Msa0651930 | -0.815773 | 7.785605e-52 | -8.615850e-47 |
| Msa0331700 | Msa0651930 | 0.806293 | 8.825579e-50 | -8.615850e-47 |
| Msa0534900 | Msa0651930 | 0.809877 | 1.522971e-50 | -8.615850e-47 |
| Msa0556790 | Msa0651930 | 0.801386 | 9.226832e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0651930 | MtrunA17_Chr7g0255251 | 61.538 | 91 | 1 | 1 | 25 | 115 | 129 | 185 | 4.81e-28 | 102 |
| Msa0651930 | MtrunA17_Chr4g0045861 | 61.538 | 91 | 1 | 1 | 25 | 115 | 129 | 185 | 5.07e-28 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0651930 | AT1G77440.2 | 59.341 | 91 | 3 | 1 | 25 | 115 | 129 | 185 | 6.48e-27 | 100 |
| Msa0651930 | AT1G77440.1 | 59.341 | 91 | 3 | 1 | 25 | 115 | 129 | 185 | 6.48e-27 | 100 |
| Msa0651930 | AT1G21720.1 | 58.242 | 91 | 4 | 1 | 25 | 115 | 129 | 185 | 1.51e-26 | 99.4 |
Find 42 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAAAGACTTCGTTGTTGC+TGG | 0.312434 | 4_3:+59495854 | Msa0651930:CDS |
| TATGTAGCAGTTACTAATAT+TGG | 0.334232 | 4_3:+59497771 | Msa0651930:three_prime_UTR |
| ATCCTTTCCTTTACTTCTGT+TGG | 0.340096 | 4_3:-59497659 | None:intergenic |
| TGCCGCCATCCTTAACAAAT+TGG | 0.363795 | 4_3:+59495699 | Msa0651930:CDS |
| ACCGTGACTGTCTTAGTGGC+TGG | 0.366163 | 4_3:+59497045 | Msa0651930:CDS |
| GGAAGAGCACACTTCGTTCC+AGG | 0.394355 | 4_3:+59496522 | Msa0651930:CDS |
| CAAGTATTTCAAGTTCACTA+TGG | 0.410596 | 4_3:+59497721 | Msa0651930:CDS |
| CCACCATGTCCAATTTGTTA+AGG | 0.426107 | 4_3:-59495708 | None:intergenic |
| GTAGACCGTGACTGTCTTAG+TGG | 0.447953 | 4_3:+59497041 | Msa0651930:CDS |
| CCGTGACTGTCTTAGTGGCT+GGG | 0.465306 | 4_3:+59497046 | Msa0651930:CDS |
| ACTTTAGGACAAACCATGTC+AGG | 0.468461 | 4_3:-59495923 | None:intergenic |
| CTGCATCAAATCCTCATGCT+TGG | 0.496361 | 4_3:-59496476 | None:intergenic |
| TACAGATGATAACAGTGCTT+GGG | 0.500678 | 4_3:-59497021 | None:intergenic |
| CATGTCCAATTTGTTAAGGA+TGG | 0.503292 | 4_3:-59495704 | None:intergenic |
| CAGCACTCCAACAGAAGTAA+AGG | 0.504233 | 4_3:+59497652 | Msa0651930:intron |
| TGGACATGGTGGTTGTCAAT+CGG | 0.505251 | 4_3:+59495719 | Msa0651930:CDS |
| CTACAGATGATAACAGTGCT+TGG | 0.527206 | 4_3:-59497022 | None:intergenic |
| ACTGCGTCCGAGTCTCTGTA+TGG | 0.530151 | 4_3:+59495878 | Msa0651930:CDS |
| TGAGGATTTGATGCAGGTGT+GGG | 0.549509 | 4_3:+59496483 | Msa0651930:CDS |
| TTACCCACCGAGATATGCCC+TGG | 0.550241 | 4_3:-59496540 | None:intergenic |
| CTTCGTTCCAGGGCATATCT+CGG | 0.555520 | 4_3:+59496533 | Msa0651930:CDS |
| CAAGCATGAGGATTTGATGC+AGG | 0.563263 | 4_3:+59496477 | Msa0651930:CDS |
| GTTTCTTATTCAGGAAGCTG+AGG | 0.568571 | 4_3:+59496980 | Msa0651930:intron |
| GTTCAGGCTTGGACACAAGC+TGG | 0.568979 | 4_3:+59496451 | Msa0651930:intron |
| ATGAGGATTTGATGCAGGTG+TGG | 0.570879 | 4_3:+59496482 | Msa0651930:CDS |
| TGATAACAGTGCTTGGGAGA+TGG | 0.572635 | 4_3:-59497015 | None:intergenic |
| CGTGACTGTCTTAGTGGCTG+GGG | 0.572971 | 4_3:+59497047 | Msa0651930:CDS |
| GACTGTCTTAGTGGCTGGGG+TGG | 0.577441 | 4_3:+59497050 | Msa0651930:CDS |
| GTCCAATTTGTTAAGGATGG+CGG | 0.585343 | 4_3:-59495701 | None:intergenic |
| GAGGATTTGATGCAGGTGTG+GGG | 0.593670 | 4_3:+59496484 | Msa0651930:CDS |
| GAAGAGCACACTTCGTTCCA+GGG | 0.594106 | 4_3:+59496523 | Msa0651930:CDS |
| CGTTCCAGGGCATATCTCGG+TGG | 0.598794 | 4_3:+59496536 | Msa0651930:CDS |
| ATCGATGTTTAAGCCTGACA+TGG | 0.603428 | 4_3:+59495910 | Msa0651930:CDS |
| CTCCAACAGAAGTAAAGGAA+AGG | 0.604008 | 4_3:+59497657 | Msa0651930:CDS |
| ACTTGAAATACTTGACCAGA+TGG | 0.611301 | 4_3:-59497712 | None:intergenic |
| GTTCCAGGGCATATCTCGGT+GGG | 0.611391 | 4_3:+59496537 | Msa0651930:CDS |
| CATCCTTAACAAATTGGACA+TGG | 0.628147 | 4_3:+59495705 | Msa0651930:CDS |
| ACAAGCTGGCTCCAAGCATG+AGG | 0.632949 | 4_3:+59496465 | Msa0651930:CDS |
| AGGATTTGATGCAGGTGTGG+GGG | 0.638900 | 4_3:+59496485 | Msa0651930:CDS |
| CCTTAACAAATTGGACATGG+TGG | 0.651758 | 4_3:+59495708 | Msa0651930:CDS |
| ACAAGCACCATACAGAGACT+CGG | 0.663819 | 4_3:-59495885 | None:intergenic |
| CCCAGCCACTAAGACAGTCA+CGG | 0.679067 | 4_3:-59497046 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATATTATTTTTATTAATT+AGG | + | chr4_3:59497424-59497443 | Msa0651930:intron | 0.0% |
| !!! | TAATATTATTTTTATTAATT+AGG | + | chr4_3:59497424-59497443 | Msa0651930:intron | 0.0% |
| !!! | GTTAATTTAAAATAGTTATT+GGG | + | chr4_3:59496724-59496743 | Msa0651930:intron | 10.0% |
| !! | ATAAAAAATATTAATGTGTA+TGG | + | chr4_3:59497328-59497347 | Msa0651930:intron | 10.0% |
| !!! | TTATTTTTATTAATTAGGAT+TGG | + | chr4_3:59497429-59497448 | Msa0651930:intron | 10.0% |
| !!! | CAAGTTTTTAAAAATTAAAT+TGG | + | chr4_3:59497522-59497541 | Msa0651930:intron | 10.0% |
| !! | ATAAATATAAAGAAAAACAT+GGG | - | chr4_3:59497811-59497830 | None:intergenic | 10.0% |
| !! | AATAAATATAAAGAAAAACA+TGG | - | chr4_3:59497812-59497831 | None:intergenic | 10.0% |
| !!! | GTTAATTTAAAATAGTTATT+GGG | + | chr4_3:59496724-59496743 | Msa0651930:intron | 10.0% |
| !! | ATAAAAAATATTAATGTGTA+TGG | + | chr4_3:59497328-59497347 | Msa0651930:intron | 10.0% |
| !!! | TTATTTTTATTAATTAGGAT+TGG | + | chr4_3:59497429-59497448 | Msa0651930:intron | 10.0% |
| !!! | CAAGTTTTTAAAAATTAAAT+TGG | + | chr4_3:59497522-59497541 | Msa0651930:intron | 10.0% |
| !! | ATAAATATAAAGAAAAACAT+GGG | - | chr4_3:59497811-59497830 | None:intergenic | 10.0% |
| !! | AATAAATATAAAGAAAAACA+TGG | - | chr4_3:59497812-59497831 | None:intergenic | 10.0% |
| !!! | GGTTAATTTAAAATAGTTAT+TGG | + | chr4_3:59496723-59496742 | Msa0651930:intron | 15.0% |
| !!! | GTTTTTCTTTATATTTATTG+TGG | + | chr4_3:59497813-59497832 | Msa0651930:three_prime_UTR | 15.0% |
| !!! | ATGATATTTTTTATGTATCA+TGG | + | chr4_3:59497858-59497877 | Msa0651930:three_prime_UTR | 15.0% |
| !! | TAATAAATATCAAAAAAGCA+CGG | - | chr4_3:59497897-59497916 | None:intergenic | 15.0% |
| !!! | GGTTAATTTAAAATAGTTAT+TGG | + | chr4_3:59496723-59496742 | Msa0651930:intron | 15.0% |
| !!! | GTTTTTCTTTATATTTATTG+TGG | + | chr4_3:59497813-59497832 | Msa0651930:three_prime_UTR | 15.0% |
| !!! | ATGATATTTTTTATGTATCA+TGG | + | chr4_3:59497858-59497877 | Msa0651930:three_prime_UTR | 15.0% |
| !! | TAATAAATATCAAAAAAGCA+CGG | - | chr4_3:59497897-59497916 | None:intergenic | 15.0% |
| !!! | AGAATAACATGTCTTTTATT+TGG | - | chr4_3:59496422-59496441 | None:intergenic | 20.0% |
| !!! | TTCTTTAGTTGTTTGTTATT+GGG | + | chr4_3:59497109-59497128 | Msa0651930:intron | 20.0% |
| !!! | ATCATATTTTTGATCTCTTA+AGG | + | chr4_3:59497499-59497518 | Msa0651930:intron | 20.0% |
| !!! | AATAAATATCAAAAAAGCAC+GGG | - | chr4_3:59497896-59497915 | None:intergenic | 20.0% |
| !!! | GCTTTTTTGATATTTATTAG+TGG | + | chr4_3:59497898-59497917 | Msa0651930:three_prime_UTR | 20.0% |
| !!! | AGAATAACATGTCTTTTATT+TGG | - | chr4_3:59496422-59496441 | None:intergenic | 20.0% |
| !!! | TTCTTTAGTTGTTTGTTATT+GGG | + | chr4_3:59497109-59497128 | Msa0651930:intron | 20.0% |
| !!! | ATCATATTTTTGATCTCTTA+AGG | + | chr4_3:59497499-59497518 | Msa0651930:intron | 20.0% |
| !!! | AATAAATATCAAAAAAGCAC+GGG | - | chr4_3:59497896-59497915 | None:intergenic | 20.0% |
| !!! | GCTTTTTTGATATTTATTAG+TGG | + | chr4_3:59497898-59497917 | Msa0651930:three_prime_UTR | 20.0% |
| ! | GACAAAACAAGTTAAACTTT+AGG | - | chr4_3:59495941-59495960 | None:intergenic | 25.0% |
| !!! | TCTTCATTTTATGGTTTTGA+TGG | + | chr4_3:59496213-59496232 | Msa0651930:intron | 25.0% |
| !!! | CTTCTTTAGTTGTTTGTTAT+TGG | + | chr4_3:59497108-59497127 | Msa0651930:intron | 25.0% |
| !!! | TCTTTAGTTGTTTGTTATTG+GGG | + | chr4_3:59497110-59497129 | Msa0651930:intron | 25.0% |
| !! | AACCTAAACTTTTATCATAG+TGG | + | chr4_3:59497601-59497620 | Msa0651930:intron | 25.0% |
| ! | TATGTAGCAGTTACTAATAT+TGG | + | chr4_3:59497771-59497790 | Msa0651930:three_prime_UTR | 25.0% |
| ! | GACAAAACAAGTTAAACTTT+AGG | - | chr4_3:59495941-59495960 | None:intergenic | 25.0% |
| !!! | TCTTCATTTTATGGTTTTGA+TGG | + | chr4_3:59496213-59496232 | Msa0651930:intron | 25.0% |
| !!! | CTTCTTTAGTTGTTTGTTAT+TGG | + | chr4_3:59497108-59497127 | Msa0651930:intron | 25.0% |
| !!! | TCTTTAGTTGTTTGTTATTG+GGG | + | chr4_3:59497110-59497129 | Msa0651930:intron | 25.0% |
| !! | AACCTAAACTTTTATCATAG+TGG | + | chr4_3:59497601-59497620 | Msa0651930:intron | 25.0% |
| ! | TATGTAGCAGTTACTAATAT+TGG | + | chr4_3:59497771-59497790 | Msa0651930:three_prime_UTR | 25.0% |
| !! | TGTCTGTTTTTCACTTGTTT+TGG | + | chr4_3:59496006-59496025 | Msa0651930:intron | 30.0% |
| ! | TAAGAAGCATGTAGTCTTAA+AGG | - | chr4_3:59496074-59496093 | None:intergenic | 30.0% |
| !! | GTAGAGAAATTTGCTATACA+TGG | - | chr4_3:59496115-59496134 | None:intergenic | 30.0% |
| ! | TGGGTTGTATCTTCATTTTA+TGG | + | chr4_3:59496204-59496223 | Msa0651930:intron | 30.0% |
| !! | GTCTTTTATTTGGAAACCTT+GGG | - | chr4_3:59496412-59496431 | None:intergenic | 30.0% |
| !! | TGTCTTTTATTTGGAAACCT+TGG | - | chr4_3:59496413-59496432 | None:intergenic | 30.0% |
| !! | TTATTCTGCTTTTACTGTTC+AGG | + | chr4_3:59496435-59496454 | Msa0651930:intron | 30.0% |
| ATCAAGCTAAGCTAAATCAT+GGG | - | chr4_3:59496898-59496917 | None:intergenic | 30.0% | |
| TATCAAGCTAAGCTAAATCA+TGG | - | chr4_3:59496899-59496918 | None:intergenic | 30.0% | |
| ! | AAAATCATAAGCTTCCCTTT+TGG | - | chr4_3:59496952-59496971 | None:intergenic | 30.0% |
| ! | AAGCTTATGATTTTTGTGCT+TGG | + | chr4_3:59496958-59496977 | Msa0651930:intron | 30.0% |
| AGCCACTATGATAAAAGTTT+AGG | - | chr4_3:59497606-59497625 | None:intergenic | 30.0% | |
| ! | CTTTTATCATAGTGGCTTAT+TGG | + | chr4_3:59497609-59497628 | Msa0651930:intron | 30.0% |
| ! | AGTAAAGGAAAGGATTTTGA+AGG | + | chr4_3:59497667-59497686 | Msa0651930:CDS | 30.0% |
| ! | GTAAAGGAAAGGATTTTGAA+GGG | + | chr4_3:59497668-59497687 | Msa0651930:CDS | 30.0% |
| !! | CAAGTATTTCAAGTTCACTA+TGG | + | chr4_3:59497721-59497740 | Msa0651930:CDS | 30.0% |
| !! | TGTCTGTTTTTCACTTGTTT+TGG | + | chr4_3:59496006-59496025 | Msa0651930:intron | 30.0% |
| ! | TAAGAAGCATGTAGTCTTAA+AGG | - | chr4_3:59496074-59496093 | None:intergenic | 30.0% |
| !! | GTAGAGAAATTTGCTATACA+TGG | - | chr4_3:59496115-59496134 | None:intergenic | 30.0% |
| ! | TGGGTTGTATCTTCATTTTA+TGG | + | chr4_3:59496204-59496223 | Msa0651930:intron | 30.0% |
| !! | GTCTTTTATTTGGAAACCTT+GGG | - | chr4_3:59496412-59496431 | None:intergenic | 30.0% |
| !! | TGTCTTTTATTTGGAAACCT+TGG | - | chr4_3:59496413-59496432 | None:intergenic | 30.0% |
| !! | TTATTCTGCTTTTACTGTTC+AGG | + | chr4_3:59496435-59496454 | Msa0651930:intron | 30.0% |
| ATCAAGCTAAGCTAAATCAT+GGG | - | chr4_3:59496898-59496917 | None:intergenic | 30.0% | |
| TATCAAGCTAAGCTAAATCA+TGG | - | chr4_3:59496899-59496918 | None:intergenic | 30.0% | |
| ! | AAAATCATAAGCTTCCCTTT+TGG | - | chr4_3:59496952-59496971 | None:intergenic | 30.0% |
| ! | AAGCTTATGATTTTTGTGCT+TGG | + | chr4_3:59496958-59496977 | Msa0651930:intron | 30.0% |
| AGCCACTATGATAAAAGTTT+AGG | - | chr4_3:59497606-59497625 | None:intergenic | 30.0% | |
| ! | CTTTTATCATAGTGGCTTAT+TGG | + | chr4_3:59497609-59497628 | Msa0651930:intron | 30.0% |
| ! | AGTAAAGGAAAGGATTTTGA+AGG | + | chr4_3:59497667-59497686 | Msa0651930:CDS | 30.0% |
| ! | GTAAAGGAAAGGATTTTGAA+GGG | + | chr4_3:59497668-59497687 | Msa0651930:CDS | 30.0% |
| !! | CAAGTATTTCAAGTTCACTA+TGG | + | chr4_3:59497721-59497740 | Msa0651930:CDS | 30.0% |
| !! | CATGTCCAATTTGTTAAGGA+TGG | - | chr4_3:59495707-59495726 | None:intergenic | 35.0% |
| CATCCTTAACAAATTGGACA+TGG | + | chr4_3:59495705-59495724 | Msa0651930:CDS | 35.0% | |
| TCCTCGTTATATGATCTTAC+AGG | - | chr4_3:59496241-59496260 | None:intergenic | 35.0% | |
| ACCACATTGAAAATTGTCGA+GGG | + | chr4_3:59496335-59496354 | Msa0651930:intron | 35.0% | |
| ATTGAAAATTGTCGAGGGAA+AGG | + | chr4_3:59496340-59496359 | Msa0651930:intron | 35.0% | |
| TAAACTGCTCGAATGAGATA+GGG | - | chr4_3:59496609-59496628 | None:intergenic | 35.0% | |
| TTAAACTGCTCGAATGAGAT+AGG | - | chr4_3:59496610-59496629 | None:intergenic | 35.0% | |
| AAGAGTTTGAGCTACATTCT+AGG | + | chr4_3:59496628-59496647 | Msa0651930:intron | 35.0% | |
| AGAGTTTGAGCTACATTCTA+GGG | + | chr4_3:59496629-59496648 | Msa0651930:intron | 35.0% | |
| ! | GGAATCTGAGATTCAAATAG+AGG | + | chr4_3:59496812-59496831 | Msa0651930:intron | 35.0% |
| TCAAGCTAAGCTAAATCATG+GGG | - | chr4_3:59496897-59496916 | None:intergenic | 35.0% | |
| TTTCTCCATGTTTGCCAAAA+GGG | + | chr4_3:59496935-59496954 | Msa0651930:intron | 35.0% | |
| TTGTGCTTGGTTTCTTATTC+AGG | + | chr4_3:59496971-59496990 | Msa0651930:intron | 35.0% | |
| TACAGATGATAACAGTGCTT+GGG | - | chr4_3:59497024-59497043 | None:intergenic | 35.0% | |
| ! | AAATGATTTTCCACATGCCA+AGG | - | chr4_3:59497243-59497262 | None:intergenic | 35.0% |
| ATCCTTTCCTTTACTTCTGT+TGG | - | chr4_3:59497662-59497681 | None:intergenic | 35.0% | |
| !! | AAGGATTTTGAAGGGAAGAA+TGG | + | chr4_3:59497676-59497695 | Msa0651930:CDS | 35.0% |
| !!! | GGATTAAGTTTTAAGCCATC+TGG | + | chr4_3:59497697-59497716 | Msa0651930:CDS | 35.0% |
| ACTTGAAATACTTGACCAGA+TGG | - | chr4_3:59497715-59497734 | None:intergenic | 35.0% | |
| !! | CATGTCCAATTTGTTAAGGA+TGG | - | chr4_3:59495707-59495726 | None:intergenic | 35.0% |
| CATCCTTAACAAATTGGACA+TGG | + | chr4_3:59495705-59495724 | Msa0651930:CDS | 35.0% | |
| TCCTCGTTATATGATCTTAC+AGG | - | chr4_3:59496241-59496260 | None:intergenic | 35.0% | |
| ACCACATTGAAAATTGTCGA+GGG | + | chr4_3:59496335-59496354 | Msa0651930:intron | 35.0% | |
| ATTGAAAATTGTCGAGGGAA+AGG | + | chr4_3:59496340-59496359 | Msa0651930:intron | 35.0% | |
| TAAACTGCTCGAATGAGATA+GGG | - | chr4_3:59496609-59496628 | None:intergenic | 35.0% | |
| TTAAACTGCTCGAATGAGAT+AGG | - | chr4_3:59496610-59496629 | None:intergenic | 35.0% | |
| AAGAGTTTGAGCTACATTCT+AGG | + | chr4_3:59496628-59496647 | Msa0651930:intron | 35.0% | |
| AGAGTTTGAGCTACATTCTA+GGG | + | chr4_3:59496629-59496648 | Msa0651930:intron | 35.0% | |
| ! | GGAATCTGAGATTCAAATAG+AGG | + | chr4_3:59496812-59496831 | Msa0651930:intron | 35.0% |
| TCAAGCTAAGCTAAATCATG+GGG | - | chr4_3:59496897-59496916 | None:intergenic | 35.0% | |
| TTTCTCCATGTTTGCCAAAA+GGG | + | chr4_3:59496935-59496954 | Msa0651930:intron | 35.0% | |
| TTGTGCTTGGTTTCTTATTC+AGG | + | chr4_3:59496971-59496990 | Msa0651930:intron | 35.0% | |
| TACAGATGATAACAGTGCTT+GGG | - | chr4_3:59497024-59497043 | None:intergenic | 35.0% | |
| ! | AAATGATTTTCCACATGCCA+AGG | - | chr4_3:59497243-59497262 | None:intergenic | 35.0% |
| ATCCTTTCCTTTACTTCTGT+TGG | - | chr4_3:59497662-59497681 | None:intergenic | 35.0% | |
| !! | AAGGATTTTGAAGGGAAGAA+TGG | + | chr4_3:59497676-59497695 | Msa0651930:CDS | 35.0% |
| !!! | GGATTAAGTTTTAAGCCATC+TGG | + | chr4_3:59497697-59497716 | Msa0651930:CDS | 35.0% |
| ACTTGAAATACTTGACCAGA+TGG | - | chr4_3:59497715-59497734 | None:intergenic | 35.0% | |
| !! | GTCCAATTTGTTAAGGATGG+CGG | - | chr4_3:59495704-59495723 | None:intergenic | 40.0% |
| !! | CCACCATGTCCAATTTGTTA+AGG | - | chr4_3:59495711-59495730 | None:intergenic | 40.0% |
| CCTTAACAAATTGGACATGG+TGG | + | chr4_3:59495708-59495727 | Msa0651930:CDS | 40.0% | |
| ATCGATGTTTAAGCCTGACA+TGG | + | chr4_3:59495910-59495929 | Msa0651930:CDS | 40.0% | |
| !! | ACTTTAGGACAAACCATGTC+AGG | - | chr4_3:59495926-59495945 | None:intergenic | 40.0% |
| AGCAAATTTCTCTACACCCT+TGG | + | chr4_3:59496120-59496139 | Msa0651930:intron | 40.0% | |
| TGAGGTGGTTTCCAAGAAAT+CGG | + | chr4_3:59496175-59496194 | Msa0651930:intron | 40.0% | |
| GCCTGTAAGATCATATAACG+AGG | + | chr4_3:59496237-59496256 | Msa0651930:intron | 40.0% | |
| AAGATCATATAACGAGGAGC+TGG | + | chr4_3:59496243-59496262 | Msa0651930:intron | 40.0% | |
| ! | CTCGACAATTTTCAATGTGG+TGG | - | chr4_3:59496336-59496355 | None:intergenic | 40.0% |
| CACCACATTGAAAATTGTCG+AGG | + | chr4_3:59496334-59496353 | Msa0651930:intron | 40.0% | |
| ! | TCCCTCGACAATTTTCAATG+TGG | - | chr4_3:59496339-59496358 | None:intergenic | 40.0% |
| GAAATTAAACCAGCACCACA+GGG | - | chr4_3:59496386-59496405 | None:intergenic | 40.0% | |
| TTTATTTGGAAACCTTGGGC+TGG | - | chr4_3:59496408-59496427 | None:intergenic | 40.0% | |
| GTGGGGGATATTTCTTAAAC+AGG | + | chr4_3:59496501-59496520 | Msa0651930:CDS | 40.0% | |
| ACTACAAAGCTCAACCACTA+AGG | + | chr4_3:59496562-59496581 | Msa0651930:intron | 40.0% | |
| CTTCCTATAGAACTTGCATG+TGG | - | chr4_3:59496655-59496674 | None:intergenic | 40.0% | |
| AGCAACAAGCAGAAAAGATC+AGG | + | chr4_3:59496701-59496720 | Msa0651930:intron | 40.0% | |
| GCAACAAGCAGAAAAGATCA+GGG | + | chr4_3:59496702-59496721 | Msa0651930:intron | 40.0% | |
| TGGAAGTGAGACGTTCTTTA+GGG | + | chr4_3:59496784-59496803 | Msa0651930:intron | 40.0% | |
| !! | TGAGACGTTCTTTAGGGTAA+AGG | + | chr4_3:59496790-59496809 | Msa0651930:intron | 40.0% |
| !! | GAGACGTTCTTTAGGGTAAA+GGG | + | chr4_3:59496791-59496810 | Msa0651930:intron | 40.0% |
| CTGAAGAAACAACCGCAAAA+TGG | - | chr4_3:59496849-59496868 | None:intergenic | 40.0% | |
| GTTTCTCCATGTTTGCCAAA+AGG | + | chr4_3:59496934-59496953 | Msa0651930:intron | 40.0% | |
| GTTTCTTATTCAGGAAGCTG+AGG | + | chr4_3:59496980-59496999 | Msa0651930:intron | 40.0% | |
| CTACAGATGATAACAGTGCT+TGG | - | chr4_3:59497025-59497044 | None:intergenic | 40.0% | |
| AGTTCATCTTACAAGCCACT+AGG | + | chr4_3:59497199-59497218 | Msa0651930:intron | 40.0% | |
| GCTGCAGCAAACAAAATTTG+AGG | - | chr4_3:59497636-59497655 | None:intergenic | 40.0% | |
| CTCCAACAGAAGTAAAGGAA+AGG | + | chr4_3:59497657-59497676 | Msa0651930:CDS | 40.0% | |
| !! | GTCCAATTTGTTAAGGATGG+CGG | - | chr4_3:59495704-59495723 | None:intergenic | 40.0% |
| !! | CCACCATGTCCAATTTGTTA+AGG | - | chr4_3:59495711-59495730 | None:intergenic | 40.0% |
| CCTTAACAAATTGGACATGG+TGG | + | chr4_3:59495708-59495727 | Msa0651930:CDS | 40.0% | |
| ATCGATGTTTAAGCCTGACA+TGG | + | chr4_3:59495910-59495929 | Msa0651930:CDS | 40.0% | |
| !! | ACTTTAGGACAAACCATGTC+AGG | - | chr4_3:59495926-59495945 | None:intergenic | 40.0% |
| AGCAAATTTCTCTACACCCT+TGG | + | chr4_3:59496120-59496139 | Msa0651930:intron | 40.0% | |
| TGAGGTGGTTTCCAAGAAAT+CGG | + | chr4_3:59496175-59496194 | Msa0651930:intron | 40.0% | |
| GCCTGTAAGATCATATAACG+AGG | + | chr4_3:59496237-59496256 | Msa0651930:intron | 40.0% | |
| AAGATCATATAACGAGGAGC+TGG | + | chr4_3:59496243-59496262 | Msa0651930:intron | 40.0% | |
| ! | CTCGACAATTTTCAATGTGG+TGG | - | chr4_3:59496336-59496355 | None:intergenic | 40.0% |
| CACCACATTGAAAATTGTCG+AGG | + | chr4_3:59496334-59496353 | Msa0651930:intron | 40.0% | |
| ! | TCCCTCGACAATTTTCAATG+TGG | - | chr4_3:59496339-59496358 | None:intergenic | 40.0% |
| GAAATTAAACCAGCACCACA+GGG | - | chr4_3:59496386-59496405 | None:intergenic | 40.0% | |
| TTTATTTGGAAACCTTGGGC+TGG | - | chr4_3:59496408-59496427 | None:intergenic | 40.0% | |
| GTGGGGGATATTTCTTAAAC+AGG | + | chr4_3:59496501-59496520 | Msa0651930:CDS | 40.0% | |
| ACTACAAAGCTCAACCACTA+AGG | + | chr4_3:59496562-59496581 | Msa0651930:intron | 40.0% | |
| CTTCCTATAGAACTTGCATG+TGG | - | chr4_3:59496655-59496674 | None:intergenic | 40.0% | |
| AGCAACAAGCAGAAAAGATC+AGG | + | chr4_3:59496701-59496720 | Msa0651930:intron | 40.0% | |
| GCAACAAGCAGAAAAGATCA+GGG | + | chr4_3:59496702-59496721 | Msa0651930:intron | 40.0% | |
| TGGAAGTGAGACGTTCTTTA+GGG | + | chr4_3:59496784-59496803 | Msa0651930:intron | 40.0% | |
| !! | TGAGACGTTCTTTAGGGTAA+AGG | + | chr4_3:59496790-59496809 | Msa0651930:intron | 40.0% |
| !! | GAGACGTTCTTTAGGGTAAA+GGG | + | chr4_3:59496791-59496810 | Msa0651930:intron | 40.0% |
| CTGAAGAAACAACCGCAAAA+TGG | - | chr4_3:59496849-59496868 | None:intergenic | 40.0% | |
| GTTTCTCCATGTTTGCCAAA+AGG | + | chr4_3:59496934-59496953 | Msa0651930:intron | 40.0% | |
| GTTTCTTATTCAGGAAGCTG+AGG | + | chr4_3:59496980-59496999 | Msa0651930:intron | 40.0% | |
| CTACAGATGATAACAGTGCT+TGG | - | chr4_3:59497025-59497044 | None:intergenic | 40.0% | |
| AGTTCATCTTACAAGCCACT+AGG | + | chr4_3:59497199-59497218 | Msa0651930:intron | 40.0% | |
| GCTGCAGCAAACAAAATTTG+AGG | - | chr4_3:59497636-59497655 | None:intergenic | 40.0% | |
| CTCCAACAGAAGTAAAGGAA+AGG | + | chr4_3:59497657-59497676 | Msa0651930:CDS | 40.0% | |
| TGCCGCCATCCTTAACAAAT+TGG | + | chr4_3:59495699-59495718 | Msa0651930:CDS | 45.0% | |
| TGGACATGGTGGTTGTCAAT+CGG | + | chr4_3:59495719-59495738 | Msa0651930:CDS | 45.0% | |
| GTTGTCAAAGATCAGTGCCA+TGG | - | chr4_3:59495748-59495767 | None:intergenic | 45.0% | |
| GCAAAAGACTTCGTTGTTGC+TGG | + | chr4_3:59495854-59495873 | Msa0651930:CDS | 45.0% | |
| ACAAGCACCATACAGAGACT+CGG | - | chr4_3:59495888-59495907 | None:intergenic | 45.0% | |
| TCTACACCCTTGGTATCTGT+GGG | + | chr4_3:59496130-59496149 | Msa0651930:intron | 45.0% | |
| ATCAAGCCTTCATCATGAGG+TGG | + | chr4_3:59496160-59496179 | Msa0651930:intron | 45.0% | |
| TGGAAACCACCTCATGATGA+AGG | - | chr4_3:59496169-59496188 | None:intergenic | 45.0% | |
| GAGGTGGTTTCCAAGAAATC+GGG | + | chr4_3:59496176-59496195 | Msa0651930:intron | 45.0% | |
| AGGTGGTTTCCAAGAAATCG+GGG | + | chr4_3:59496177-59496196 | Msa0651930:intron | 45.0% | |
| TTCCAAGAAATCGGGGATTC+TGG | + | chr4_3:59496184-59496203 | Msa0651930:intron | 45.0% | |
| TCCAAGAAATCGGGGATTCT+GGG | + | chr4_3:59496185-59496204 | Msa0651930:intron | 45.0% | |
| TATAACGAGGAGCTGGTTGT+AGG | + | chr4_3:59496250-59496269 | Msa0651930:intron | 45.0% | |
| GGAAATTAAACCAGCACCAC+AGG | - | chr4_3:59496387-59496406 | None:intergenic | 45.0% | |
| ! | CTGGTTTAATTTCCAGCCCA+AGG | + | chr4_3:59496393-59496412 | Msa0651930:intron | 45.0% |
| !! | CTGCTTTTACTGTTCAGGCT+TGG | + | chr4_3:59496440-59496459 | Msa0651930:intron | 45.0% |
| CTGCATCAAATCCTCATGCT+TGG | - | chr4_3:59496479-59496498 | None:intergenic | 45.0% | |
| CAAGCATGAGGATTTGATGC+AGG | + | chr4_3:59496477-59496496 | Msa0651930:CDS | 45.0% | |
| ATGAGGATTTGATGCAGGTG+TGG | + | chr4_3:59496482-59496501 | Msa0651930:CDS | 45.0% | |
| TGAGGATTTGATGCAGGTGT+GGG | + | chr4_3:59496483-59496502 | Msa0651930:CDS | 45.0% | |
| AAGATCGACGATTGTACTGC+TGG | + | chr4_3:59496672-59496691 | Msa0651930:intron | 45.0% | |
| AGATCGACGATTGTACTGCT+GGG | + | chr4_3:59496673-59496692 | Msa0651930:intron | 45.0% | |
| TAATGTGCAATGTCCGAGAG+TGG | + | chr4_3:59496764-59496783 | Msa0651930:intron | 45.0% | |
| GTGGAAGTGAGACGTTCTTT+AGG | + | chr4_3:59496783-59496802 | Msa0651930:intron | 45.0% | |
| ! | GAAGCCATTCGACCATTTTG+CGG | + | chr4_3:59496834-59496853 | Msa0651930:intron | 45.0% |
| ACAACCGCAAAATGGTCGAA+TGG | - | chr4_3:59496841-59496860 | None:intergenic | 45.0% | |
| ! | AGCTTCCCTTTTGGCAAACA+TGG | - | chr4_3:59496943-59496962 | None:intergenic | 45.0% |
| TGATAACAGTGCTTGGGAGA+TGG | - | chr4_3:59497018-59497037 | None:intergenic | 45.0% | |
| CATCTTACAAGCCACTAGGT+TGG | + | chr4_3:59497203-59497222 | Msa0651930:intron | 45.0% | |
| AAGTCGTTTGTCCAACCTAG+TGG | - | chr4_3:59497217-59497236 | None:intergenic | 45.0% | |
| ! | TGGACAAACGACTTTTGCCT+TGG | + | chr4_3:59497223-59497242 | Msa0651930:intron | 45.0% |
| CAGCACTCCAACAGAAGTAA+AGG | + | chr4_3:59497652-59497671 | Msa0651930:intron | 45.0% | |
| TGCCGCCATCCTTAACAAAT+TGG | + | chr4_3:59495699-59495718 | Msa0651930:CDS | 45.0% | |
| TGGACATGGTGGTTGTCAAT+CGG | + | chr4_3:59495719-59495738 | Msa0651930:CDS | 45.0% | |
| GTTGTCAAAGATCAGTGCCA+TGG | - | chr4_3:59495748-59495767 | None:intergenic | 45.0% | |
| GCAAAAGACTTCGTTGTTGC+TGG | + | chr4_3:59495854-59495873 | Msa0651930:CDS | 45.0% | |
| ACAAGCACCATACAGAGACT+CGG | - | chr4_3:59495888-59495907 | None:intergenic | 45.0% | |
| TCTACACCCTTGGTATCTGT+GGG | + | chr4_3:59496130-59496149 | Msa0651930:intron | 45.0% | |
| ATCAAGCCTTCATCATGAGG+TGG | + | chr4_3:59496160-59496179 | Msa0651930:intron | 45.0% | |
| TGGAAACCACCTCATGATGA+AGG | - | chr4_3:59496169-59496188 | None:intergenic | 45.0% | |
| GAGGTGGTTTCCAAGAAATC+GGG | + | chr4_3:59496176-59496195 | Msa0651930:intron | 45.0% | |
| AGGTGGTTTCCAAGAAATCG+GGG | + | chr4_3:59496177-59496196 | Msa0651930:intron | 45.0% | |
| TTCCAAGAAATCGGGGATTC+TGG | + | chr4_3:59496184-59496203 | Msa0651930:intron | 45.0% | |
| TCCAAGAAATCGGGGATTCT+GGG | + | chr4_3:59496185-59496204 | Msa0651930:intron | 45.0% | |
| TATAACGAGGAGCTGGTTGT+AGG | + | chr4_3:59496250-59496269 | Msa0651930:intron | 45.0% | |
| GGAAATTAAACCAGCACCAC+AGG | - | chr4_3:59496387-59496406 | None:intergenic | 45.0% | |
| ! | CTGGTTTAATTTCCAGCCCA+AGG | + | chr4_3:59496393-59496412 | Msa0651930:intron | 45.0% |
| !! | CTGCTTTTACTGTTCAGGCT+TGG | + | chr4_3:59496440-59496459 | Msa0651930:intron | 45.0% |
| CTGCATCAAATCCTCATGCT+TGG | - | chr4_3:59496479-59496498 | None:intergenic | 45.0% | |
| CAAGCATGAGGATTTGATGC+AGG | + | chr4_3:59496477-59496496 | Msa0651930:CDS | 45.0% | |
| ATGAGGATTTGATGCAGGTG+TGG | + | chr4_3:59496482-59496501 | Msa0651930:CDS | 45.0% | |
| TGAGGATTTGATGCAGGTGT+GGG | + | chr4_3:59496483-59496502 | Msa0651930:CDS | 45.0% | |
| AAGATCGACGATTGTACTGC+TGG | + | chr4_3:59496672-59496691 | Msa0651930:intron | 45.0% | |
| AGATCGACGATTGTACTGCT+GGG | + | chr4_3:59496673-59496692 | Msa0651930:intron | 45.0% | |
| TAATGTGCAATGTCCGAGAG+TGG | + | chr4_3:59496764-59496783 | Msa0651930:intron | 45.0% | |
| GTGGAAGTGAGACGTTCTTT+AGG | + | chr4_3:59496783-59496802 | Msa0651930:intron | 45.0% | |
| ! | GAAGCCATTCGACCATTTTG+CGG | + | chr4_3:59496834-59496853 | Msa0651930:intron | 45.0% |
| ACAACCGCAAAATGGTCGAA+TGG | - | chr4_3:59496841-59496860 | None:intergenic | 45.0% | |
| ! | AGCTTCCCTTTTGGCAAACA+TGG | - | chr4_3:59496943-59496962 | None:intergenic | 45.0% |
| TGATAACAGTGCTTGGGAGA+TGG | - | chr4_3:59497018-59497037 | None:intergenic | 45.0% | |
| CATCTTACAAGCCACTAGGT+TGG | + | chr4_3:59497203-59497222 | Msa0651930:intron | 45.0% | |
| AAGTCGTTTGTCCAACCTAG+TGG | - | chr4_3:59497217-59497236 | None:intergenic | 45.0% | |
| ! | TGGACAAACGACTTTTGCCT+TGG | + | chr4_3:59497223-59497242 | Msa0651930:intron | 45.0% |
| CAGCACTCCAACAGAAGTAA+AGG | + | chr4_3:59497652-59497671 | Msa0651930:intron | 45.0% | |
| !!! | TTTTTTTTTTAAAATAACAA+AGG | + | chr4_3:59497955-59497974 | Msa0651930:three_prime_UTR | 5.0% |
| !!! | TTTTTTTTTTAAAATAACAA+AGG | + | chr4_3:59497955-59497974 | Msa0651930:three_prime_UTR | 5.0% |
| ! | GGCATCACAGAGTTTTACGG+CGG | - | chr4_3:59495683-59495702 | None:intergenic | 50.0% |
| ! | GGCGGCATCACAGAGTTTTA+CGG | - | chr4_3:59495686-59495705 | None:intergenic | 50.0% |
| GTCAAAGATCAGTGCCATGG+TGG | - | chr4_3:59495745-59495764 | None:intergenic | 50.0% | |
| CTCTACACCCTTGGTATCTG+TGG | + | chr4_3:59496129-59496148 | Msa0651930:intron | 50.0% | |
| CCTTCACCCACAGATACCAA+GGG | - | chr4_3:59496139-59496158 | None:intergenic | 50.0% | |
| GGCATCAAGCCTTCATCATG+AGG | + | chr4_3:59496157-59496176 | Msa0651930:intron | 50.0% | |
| ACCCAGAATCCCCGATTTCT+TGG | - | chr4_3:59496189-59496208 | None:intergenic | 50.0% | |
| !! | ATTGTCGAGGGAAAGGCACT+TGG | + | chr4_3:59496347-59496366 | Msa0651930:intron | 50.0% |
| !! | GAGGGAAAGGCACTTGGTTA+TGG | + | chr4_3:59496353-59496372 | Msa0651930:intron | 50.0% |
| GAGGATTTGATGCAGGTGTG+GGG | + | chr4_3:59496484-59496503 | Msa0651930:CDS | 50.0% | |
| AGGATTTGATGCAGGTGTGG+GGG | + | chr4_3:59496485-59496504 | Msa0651930:CDS | 50.0% | |
| ! | GAAGAGCACACTTCGTTCCA+GGG | + | chr4_3:59496523-59496542 | Msa0651930:CDS | 50.0% |
| CTTCGTTCCAGGGCATATCT+CGG | + | chr4_3:59496533-59496552 | Msa0651930:CDS | 50.0% | |
| GGGCCACATGCAAGTTCTAT+AGG | + | chr4_3:59496649-59496668 | Msa0651930:intron | 50.0% | |
| GAACGTCTCACTTCCACTCT+CGG | - | chr4_3:59496780-59496799 | None:intergenic | 50.0% | |
| GTAGACCGTGACTGTCTTAG+TGG | + | chr4_3:59497041-59497060 | Msa0651930:CDS | 50.0% | |
| ! | ACGACTTTTGCCTTGGCATG+TGG | + | chr4_3:59497230-59497249 | Msa0651930:intron | 50.0% |
| ! | GGCATCACAGAGTTTTACGG+CGG | - | chr4_3:59495683-59495702 | None:intergenic | 50.0% |
| ! | GGCGGCATCACAGAGTTTTA+CGG | - | chr4_3:59495686-59495705 | None:intergenic | 50.0% |
| GTCAAAGATCAGTGCCATGG+TGG | - | chr4_3:59495745-59495764 | None:intergenic | 50.0% | |
| CTCTACACCCTTGGTATCTG+TGG | + | chr4_3:59496129-59496148 | Msa0651930:intron | 50.0% | |
| CCTTCACCCACAGATACCAA+GGG | - | chr4_3:59496139-59496158 | None:intergenic | 50.0% | |
| GGCATCAAGCCTTCATCATG+AGG | + | chr4_3:59496157-59496176 | Msa0651930:intron | 50.0% | |
| ACCCAGAATCCCCGATTTCT+TGG | - | chr4_3:59496189-59496208 | None:intergenic | 50.0% | |
| !! | ATTGTCGAGGGAAAGGCACT+TGG | + | chr4_3:59496347-59496366 | Msa0651930:intron | 50.0% |
| !! | GAGGGAAAGGCACTTGGTTA+TGG | + | chr4_3:59496353-59496372 | Msa0651930:intron | 50.0% |
| GAGGATTTGATGCAGGTGTG+GGG | + | chr4_3:59496484-59496503 | Msa0651930:CDS | 50.0% | |
| AGGATTTGATGCAGGTGTGG+GGG | + | chr4_3:59496485-59496504 | Msa0651930:CDS | 50.0% | |
| ! | GAAGAGCACACTTCGTTCCA+GGG | + | chr4_3:59496523-59496542 | Msa0651930:CDS | 50.0% |
| CTTCGTTCCAGGGCATATCT+CGG | + | chr4_3:59496533-59496552 | Msa0651930:CDS | 50.0% | |
| GGGCCACATGCAAGTTCTAT+AGG | + | chr4_3:59496649-59496668 | Msa0651930:intron | 50.0% | |
| GAACGTCTCACTTCCACTCT+CGG | - | chr4_3:59496780-59496799 | None:intergenic | 50.0% | |
| GTAGACCGTGACTGTCTTAG+TGG | + | chr4_3:59497041-59497060 | Msa0651930:CDS | 50.0% | |
| ! | ACGACTTTTGCCTTGGCATG+TGG | + | chr4_3:59497230-59497249 | Msa0651930:intron | 50.0% |
| TGGTTGTCAATCGGCCACCA+TGG | + | chr4_3:59495728-59495747 | Msa0651930:intron | 55.0% | |
| ACTGCGTCCGAGTCTCTGTA+TGG | + | chr4_3:59495878-59495897 | Msa0651930:CDS | 55.0% | |
| CCCTTGGTATCTGTGGGTGA+AGG | + | chr4_3:59496136-59496155 | Msa0651930:intron | 55.0% | |
| GCCTTCACCCACAGATACCA+AGG | - | chr4_3:59496140-59496159 | None:intergenic | 55.0% | |
| ! | TTCCATCCATGTGGTGGGGT+GGG | - | chr4_3:59496307-59496326 | None:intergenic | 55.0% |
| ACCCCACCACATGGATGGAA+GGG | + | chr4_3:59496307-59496326 | Msa0651930:intron | 55.0% | |
| ACCCCTTCCATCCATGTGGT+GGG | - | chr4_3:59496312-59496331 | None:intergenic | 55.0% | |
| AACCCCTTCCATCCATGTGG+TGG | - | chr4_3:59496313-59496332 | None:intergenic | 55.0% | |
| TGGAACCCCTTCCATCCATG+TGG | - | chr4_3:59496316-59496335 | None:intergenic | 55.0% | |
| GTTCAGGCTTGGACACAAGC+TGG | + | chr4_3:59496451-59496470 | Msa0651930:intron | 55.0% | |
| ! | ACAAGCTGGCTCCAAGCATG+AGG | + | chr4_3:59496465-59496484 | Msa0651930:CDS | 55.0% |
| ! | GGAAGAGCACACTTCGTTCC+AGG | + | chr4_3:59496522-59496541 | Msa0651930:CDS | 55.0% |
| GTTCCAGGGCATATCTCGGT+GGG | + | chr4_3:59496537-59496556 | Msa0651930:CDS | 55.0% | |
| TTACCCACCGAGATATGCCC+TGG | - | chr4_3:59496543-59496562 | None:intergenic | 55.0% | |
| ! | CAGCACTTGCTGGTCCTTAG+TGG | - | chr4_3:59496579-59496598 | None:intergenic | 55.0% |
| ACCGTGACTGTCTTAGTGGC+TGG | + | chr4_3:59497045-59497064 | Msa0651930:CDS | 55.0% | |
| CCCAGCCACTAAGACAGTCA+CGG | - | chr4_3:59497049-59497068 | None:intergenic | 55.0% | |
| CCGTGACTGTCTTAGTGGCT+GGG | + | chr4_3:59497046-59497065 | Msa0651930:CDS | 55.0% | |
| CGTGACTGTCTTAGTGGCTG+GGG | + | chr4_3:59497047-59497066 | Msa0651930:CDS | 55.0% | |
| TGGTTGTCAATCGGCCACCA+TGG | + | chr4_3:59495728-59495747 | Msa0651930:intron | 55.0% | |
| ACTGCGTCCGAGTCTCTGTA+TGG | + | chr4_3:59495878-59495897 | Msa0651930:CDS | 55.0% | |
| CCCTTGGTATCTGTGGGTGA+AGG | + | chr4_3:59496136-59496155 | Msa0651930:intron | 55.0% | |
| GCCTTCACCCACAGATACCA+AGG | - | chr4_3:59496140-59496159 | None:intergenic | 55.0% | |
| ! | TTCCATCCATGTGGTGGGGT+GGG | - | chr4_3:59496307-59496326 | None:intergenic | 55.0% |
| ACCCCACCACATGGATGGAA+GGG | + | chr4_3:59496307-59496326 | Msa0651930:intron | 55.0% | |
| ACCCCTTCCATCCATGTGGT+GGG | - | chr4_3:59496312-59496331 | None:intergenic | 55.0% | |
| AACCCCTTCCATCCATGTGG+TGG | - | chr4_3:59496313-59496332 | None:intergenic | 55.0% | |
| TGGAACCCCTTCCATCCATG+TGG | - | chr4_3:59496316-59496335 | None:intergenic | 55.0% | |
| GTTCAGGCTTGGACACAAGC+TGG | + | chr4_3:59496451-59496470 | Msa0651930:intron | 55.0% | |
| ! | ACAAGCTGGCTCCAAGCATG+AGG | + | chr4_3:59496465-59496484 | Msa0651930:CDS | 55.0% |
| ! | GGAAGAGCACACTTCGTTCC+AGG | + | chr4_3:59496522-59496541 | Msa0651930:CDS | 55.0% |
| GTTCCAGGGCATATCTCGGT+GGG | + | chr4_3:59496537-59496556 | Msa0651930:CDS | 55.0% | |
| TTACCCACCGAGATATGCCC+TGG | - | chr4_3:59496543-59496562 | None:intergenic | 55.0% | |
| ! | CAGCACTTGCTGGTCCTTAG+TGG | - | chr4_3:59496579-59496598 | None:intergenic | 55.0% |
| ACCGTGACTGTCTTAGTGGC+TGG | + | chr4_3:59497045-59497064 | Msa0651930:CDS | 55.0% | |
| CCCAGCCACTAAGACAGTCA+CGG | - | chr4_3:59497049-59497068 | None:intergenic | 55.0% | |
| CCGTGACTGTCTTAGTGGCT+GGG | + | chr4_3:59497046-59497065 | Msa0651930:CDS | 55.0% | |
| CGTGACTGTCTTAGTGGCTG+GGG | + | chr4_3:59497047-59497066 | Msa0651930:CDS | 55.0% | |
| CGAGGAGCTGGTTGTAGGAG+AGG | + | chr4_3:59496255-59496274 | Msa0651930:intron | 60.0% | |
| ! | TCCATCCATGTGGTGGGGTG+GGG | - | chr4_3:59496306-59496325 | None:intergenic | 60.0% |
| ! | CTTCCATCCATGTGGTGGGG+TGG | - | chr4_3:59496308-59496327 | None:intergenic | 60.0% |
| CACCCCACCACATGGATGGA+AGG | + | chr4_3:59496306-59496325 | Msa0651930:intron | 60.0% | |
| CCCCTTCCATCCATGTGGTG+GGG | - | chr4_3:59496311-59496330 | None:intergenic | 60.0% | |
| CCCCACCACATGGATGGAAG+GGG | + | chr4_3:59496308-59496327 | Msa0651930:intron | 60.0% | |
| GGTTATGGACCTGCACCCTG+TGG | + | chr4_3:59496368-59496387 | Msa0651930:intron | 60.0% | |
| AAACCAGCACCACAGGGTGC+AGG | - | chr4_3:59496380-59496399 | None:intergenic | 60.0% | |
| CGTTCCAGGGCATATCTCGG+TGG | + | chr4_3:59496536-59496555 | Msa0651930:CDS | 60.0% | |
| GGGCAGAACTCAGCACTTGC+TGG | - | chr4_3:59496589-59496608 | None:intergenic | 60.0% | |
| GACTGTCTTAGTGGCTGGGG+TGG | + | chr4_3:59497050-59497069 | Msa0651930:CDS | 60.0% | |
| CGAGGAGCTGGTTGTAGGAG+AGG | + | chr4_3:59496255-59496274 | Msa0651930:intron | 60.0% | |
| ! | TCCATCCATGTGGTGGGGTG+GGG | - | chr4_3:59496306-59496325 | None:intergenic | 60.0% |
| ! | CTTCCATCCATGTGGTGGGG+TGG | - | chr4_3:59496308-59496327 | None:intergenic | 60.0% |
| CACCCCACCACATGGATGGA+AGG | + | chr4_3:59496306-59496325 | Msa0651930:intron | 60.0% | |
| CCCCTTCCATCCATGTGGTG+GGG | - | chr4_3:59496311-59496330 | None:intergenic | 60.0% | |
| CCCCACCACATGGATGGAAG+GGG | + | chr4_3:59496308-59496327 | Msa0651930:intron | 60.0% | |
| GGTTATGGACCTGCACCCTG+TGG | + | chr4_3:59496368-59496387 | Msa0651930:intron | 60.0% | |
| AAACCAGCACCACAGGGTGC+AGG | - | chr4_3:59496380-59496399 | None:intergenic | 60.0% | |
| CGTTCCAGGGCATATCTCGG+TGG | + | chr4_3:59496536-59496555 | Msa0651930:CDS | 60.0% | |
| GGGCAGAACTCAGCACTTGC+TGG | - | chr4_3:59496589-59496608 | None:intergenic | 60.0% | |
| GACTGTCTTAGTGGCTGGGG+TGG | + | chr4_3:59497050-59497069 | Msa0651930:CDS | 60.0% | |
| ! | ATCCATGTGGTGGGGTGGGG+TGG | - | chr4_3:59496303-59496322 | None:intergenic | 65.0% |
| ACCCCACCCCACCACATGGA+TGG | + | chr4_3:59496302-59496321 | Msa0651930:intron | 65.0% | |
| ! | ATCCATGTGGTGGGGTGGGG+TGG | - | chr4_3:59496303-59496322 | None:intergenic | 65.0% |
| ACCCCACCCCACCACATGGA+TGG | + | chr4_3:59496302-59496321 | Msa0651930:intron | 65.0% | |
| TGGTGGGGTGGGGTGGAGTG+GGG | - | chr4_3:59496296-59496315 | None:intergenic | 70.0% | |
| ! | GTGGTGGGGTGGGGTGGAGT+GGG | - | chr4_3:59496297-59496316 | None:intergenic | 70.0% |
| ! | TGTGGTGGGGTGGGGTGGAG+TGG | - | chr4_3:59496298-59496317 | None:intergenic | 70.0% |
| CTCCACCCCACCCCACCACA+TGG | + | chr4_3:59496298-59496317 | Msa0651930:intron | 70.0% | |
| GGACCTGCACCCTGTGGTGC+TGG | + | chr4_3:59496374-59496393 | Msa0651930:intron | 70.0% | |
| TGGTGGGGTGGGGTGGAGTG+GGG | - | chr4_3:59496296-59496315 | None:intergenic | 70.0% | |
| ! | GTGGTGGGGTGGGGTGGAGT+GGG | - | chr4_3:59496297-59496316 | None:intergenic | 70.0% |
| ! | TGTGGTGGGGTGGGGTGGAG+TGG | - | chr4_3:59496298-59496317 | None:intergenic | 70.0% |
| CTCCACCCCACCCCACCACA+TGG | + | chr4_3:59496298-59496317 | Msa0651930:intron | 70.0% | |
| GGACCTGCACCCTGTGGTGC+TGG | + | chr4_3:59496374-59496393 | Msa0651930:intron | 70.0% | |
| GTGGGGTGGAGTGGGGTGGG+GGG | - | chr4_3:59496289-59496308 | None:intergenic | 75.0% | |
| GGTGGGGTGGAGTGGGGTGG+GGG | - | chr4_3:59496290-59496309 | None:intergenic | 75.0% | |
| GGGTGGGGTGGAGTGGGGTG+GGG | - | chr4_3:59496291-59496310 | None:intergenic | 75.0% | |
| GGGGTGGGGTGGAGTGGGGT+GGG | - | chr4_3:59496292-59496311 | None:intergenic | 75.0% | |
| TGGGGTGGGGTGGAGTGGGG+TGG | - | chr4_3:59496293-59496312 | None:intergenic | 75.0% | |
| GTGGGGTGGAGTGGGGTGGG+GGG | - | chr4_3:59496289-59496308 | None:intergenic | 75.0% | |
| GGTGGGGTGGAGTGGGGTGG+GGG | - | chr4_3:59496290-59496309 | None:intergenic | 75.0% | |
| GGGTGGGGTGGAGTGGGGTG+GGG | - | chr4_3:59496291-59496310 | None:intergenic | 75.0% | |
| GGGGTGGGGTGGAGTGGGGT+GGG | - | chr4_3:59496292-59496311 | None:intergenic | 75.0% | |
| TGGGGTGGGGTGGAGTGGGG+TGG | - | chr4_3:59496293-59496312 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 59495667 | 59497998 | 59495667 | ID=Msa0651930;Name=Msa0651930 |
| chr4_3 | mRNA | 59495667 | 59497998 | 59495667 | ID=Msa0651930-mRNA-1;Parent=Msa0651930;Name=Msa0651930-mRNA-1;_AED=0.37;_eAED=0.37;_QI=0|0|0.4|0.6|1|1|5|251|145 |
| chr4_3 | exon | 59495667 | 59495740 | 59495667 | ID=Msa0651930-mRNA-1:exon:15947;Parent=Msa0651930-mRNA-1 |
| chr4_3 | exon | 59495847 | 59495931 | 59495847 | ID=Msa0651930-mRNA-1:exon:15948;Parent=Msa0651930-mRNA-1 |
| chr4_3 | exon | 59496457 | 59496558 | 59496457 | ID=Msa0651930-mRNA-1:exon:15949;Parent=Msa0651930-mRNA-1 |
| chr4_3 | exon | 59496993 | 59497076 | 59496993 | ID=Msa0651930-mRNA-1:exon:15950;Parent=Msa0651930-mRNA-1 |
| chr4_3 | exon | 59497655 | 59497998 | 59497655 | ID=Msa0651930-mRNA-1:exon:15951;Parent=Msa0651930-mRNA-1 |
| chr4_3 | CDS | 59495667 | 59495740 | 59495667 | ID=Msa0651930-mRNA-1:cds;Parent=Msa0651930-mRNA-1 |
| chr4_3 | CDS | 59495847 | 59495931 | 59495847 | ID=Msa0651930-mRNA-1:cds;Parent=Msa0651930-mRNA-1 |
| chr4_3 | CDS | 59496457 | 59496558 | 59496457 | ID=Msa0651930-mRNA-1:cds;Parent=Msa0651930-mRNA-1 |
| chr4_3 | CDS | 59496993 | 59497076 | 59496993 | ID=Msa0651930-mRNA-1:cds;Parent=Msa0651930-mRNA-1 |
| chr4_3 | CDS | 59497655 | 59497747 | 59497655 | ID=Msa0651930-mRNA-1:cds;Parent=Msa0651930-mRNA-1 |
| chr4_3 | three_prime_UTR | 59497748 | 59497998 | 59497748 | ID=Msa0651930-mRNA-1:three_prime_utr;Parent=Msa0651930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
