AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0589460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0589460 MtrunA17_Chr4g0006131 77.708 480 40 4 5 417 27 506 0.0 738
Msa0589460 MtrunA17_Chr4g0006111 69.811 477 74 4 4 411 49 524 0.0 656
Msa0589460 MtrunA17_Chr4g0033261 59.957 467 125 6 6 411 27 492 0.0 554
Msa0589460 MtrunA17_Chr4g0033231 57.173 467 138 6 6 411 27 492 0.0 536
Msa0589460 MtrunA17_Chr2g0329201 53.320 497 146 9 1 412 12 507 1.09e-177 505
Msa0589460 MtrunA17_Chr2g0329191 54.886 481 132 10 16 412 30 509 2.04e-176 502
Msa0589460 MtrunA17_Chr3g0088441 52.917 480 142 6 16 411 34 513 1.26e-169 486
Msa0589460 MtrunA17_Chr4g0033341 52.273 484 149 8 12 413 61 544 1.70e-169 486
Msa0589460 MtrunA17_Chr6g0482131 52.183 481 146 6 19 415 35 515 2.98e-169 484
Msa0589460 MtrunA17_Chr4g0033311 52.083 480 146 6 16 411 35 514 3.61e-168 482
Msa0589460 MtrunA17_Chr4g0033271 53.138 478 140 8 20 413 35 512 5.26e-168 481
Msa0589460 MtrunA17_Chr6g0482071 50.099 503 163 8 1 415 14 516 3.34e-166 476
Msa0589460 MtrunA17_Chr4g0033191 50.524 477 152 7 19 411 42 518 1.46e-165 475
Msa0589460 MtrunA17_Chr4g0033401 52.731 476 141 6 19 410 33 508 1.79e-165 474
Msa0589460 MtrunA17_Chr4g0033321 52.731 476 141 6 20 411 33 508 2.70e-165 474
Msa0589460 MtrunA17_Chr4g0033331 50.607 494 159 7 2 410 20 513 1.10e-163 470
Msa0589460 MtrunA17_Chr4g0033201 49.478 479 158 7 19 413 35 513 5.23e-162 466
Msa0589460 MtrunA17_Chr2g0301231 60.459 392 103 5 71 411 1 391 8.25e-161 458
Msa0589460 MtrunA17_Chr6g0482081 51.660 482 148 6 19 415 35 516 5.30e-159 458
Msa0589460 MtrunA17_Chr2g0329321 49.390 492 138 10 4 411 23 487 1.49e-153 443
Msa0589460 MtrunA17_Chr4g0010501 44.807 491 185 7 3 411 7 493 9.13e-142 413
Msa0589460 MtrunA17_Chr3g0087261 45.570 474 174 8 19 410 36 507 3.99e-138 405
Msa0589460 MtrunA17_Chr5g0430451 45.766 496 150 8 10 412 29 498 7.32e-132 388
Msa0589460 MtrunA17_Chr3g0087271 43.802 484 186 8 9 410 29 508 9.99e-128 378
Msa0589460 MtrunA17_Chr4g0043091 41.875 480 192 7 17 411 25 502 5.84e-126 373
Msa0589460 MtrunA17_Chr3g0090131 40.129 466 204 9 19 411 20 483 1.06e-113 342
Msa0589460 MtrunA17_Chr3g0090111 40.215 465 204 9 19 411 18 480 1.94e-112 338
Msa0589460 MtrunA17_Chr4g0042171 38.115 488 214 8 10 411 14 499 3.00e-112 338
Msa0589460 MtrunA17_Chr6g0482941 39.344 488 209 9 9 414 32 514 1.99e-109 331
Msa0589460 MtrunA17_Chr6g0482951 38.115 488 215 9 9 414 32 514 7.03e-106 322
Msa0589460 MtrunA17_Chr2g0288071 38.076 499 222 7 1 414 48 544 1.35e-105 323
Msa0589460 MtrunA17_Chr2g0317841 38.105 475 209 10 19 410 31 503 3.99e-105 321
Msa0589460 MtrunA17_Chr2g0317821 38.105 475 209 9 19 410 31 503 9.51e-105 320
Msa0589460 MtrunA17_Chr4g0074561 37.844 473 205 10 25 410 40 510 1.02e-104 320
Msa0589460 MtrunA17_Chr2g0288021 37.474 483 215 10 20 417 35 515 9.67e-104 317
Msa0589460 MtrunA17_Chr4g0074551 38.797 482 209 9 17 414 47 526 1.08e-102 315
Msa0589460 MtrunA17_Chr1g0195611 37.712 472 208 9 21 414 28 491 1.80e-97 300
Msa0589460 MtrunA17_Chr7g0242691 36.122 490 225 9 2 411 13 494 1.87e-97 301
Msa0589460 MtrunA17_Chr5g0428831 36.864 472 213 9 21 414 28 492 6.50e-97 299
Msa0589460 MtrunA17_Chr7g0242681 37.474 475 208 9 17 411 35 500 6.71e-95 295
Msa0589460 MtrunA17_Chr7g0234131 37.446 462 212 9 21 410 76 532 6.83e-94 292
Msa0589460 MtrunA17_Chr7g0234111 37.339 466 212 7 21 413 76 534 7.43e-93 289
Msa0589460 MtrunA17_Chr7g0234091 37.284 464 215 8 21 413 76 534 5.76e-92 287
Msa0589460 MtrunA17_Chr4g0006971 36.730 471 210 10 22 412 29 491 1.79e-91 285
Msa0589460 MtrunA17_Chr3g0087201 43.188 345 120 6 140 412 4 344 3.06e-86 266
Msa0589460 MtrunA17_Chr5g0418871 44.906 265 118 3 47 285 26 288 4.58e-72 229
Msa0589460 MtrunA17_Chr1g0195641 40.984 305 137 5 22 285 29 331 1.08e-71 231
Msa0589460 MtrunA17_Chr7g0230651 36.517 356 165 5 50 349 18 368 2.58e-71 229
Msa0589460 MtrunA17_Chr3g0087191 52.318 151 55 2 12 145 14 164 4.77e-48 161
Msa0589460 MtrunA17_Chr7g0227561 34.733 262 109 5 22 247 48 283 5.16e-46 160
Msa0589460 MtrunA17_Chr7g0236731 40.930 215 106 3 92 285 28 242 7.51e-42 149
Msa0589460 MtrunA17_Chr4g0068871 26.525 377 227 9 67 415 183 537 7.04e-29 119
Msa0589460 MtrunA17_Chr5g0418861 51.111 90 43 1 322 410 1 90 6.28e-26 100
Msa0589460 MtrunA17_Chr8g0352881 37.931 87 54 0 208 294 62 148 4.82e-12 63.9
Msa0589460 MtrunA17_Chr7g0227591 46.429 56 30 0 358 413 13 68 1.18e-11 60.1
Msa0589460 MtrunA17_Chr1g0195651 51.852 54 25 1 362 414 1 54 3.70e-11 58.9
Msa0589460 MtrunA17_Chr7g0236741 37.931 58 36 0 358 415 10 67 4.01e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0589460 AT2G44480.1 42.292 480 194 6 17 413 32 511 1.84e-130 385
Msa0589460 AT2G44480.3 42.292 480 194 6 17 413 63 542 3.89e-130 386
Msa0589460 AT5G44640.1 41.566 498 203 9 1 414 12 505 2.46e-129 382
Msa0589460 AT5G42260.1 41.633 490 198 8 1 406 12 497 8.92e-128 379
Msa0589460 AT2G44450.1 41.718 489 198 7 9 414 20 504 7.57e-127 376
Msa0589460 AT5G24550.1 43.035 481 187 9 20 413 32 512 2.82e-124 370
Msa0589460 AT3G60140.1 41.701 482 195 8 16 411 22 503 1.00e-122 368
Msa0589460 AT1G26560.1 42.050 478 189 8 19 410 31 506 6.89e-122 363
Msa0589460 AT2G44490.1 39.709 481 202 8 22 414 16 496 1.16e-121 365
Msa0589460 AT3G60120.1 41.309 489 196 9 12 412 6 491 2.69e-121 363
Msa0589460 AT3G60130.1 41.300 477 192 8 19 411 29 501 8.62e-121 361
Msa0589460 AT5G36890.2 42.796 465 191 8 21 411 17 480 1.44e-120 359
Msa0589460 AT5G36890.1 42.796 465 191 8 21 411 17 480 1.50e-120 359
Msa0589460 AT5G24540.1 42.412 481 190 8 20 413 32 512 2.33e-119 358
Msa0589460 AT2G25630.1 40.336 476 213 8 2 410 12 483 1.26e-118 354
Msa0589460 AT5G54570.1 40.289 484 200 8 14 410 24 505 7.34e-118 354
Msa0589460 AT1G75940.1 39.917 481 199 8 20 410 37 517 9.61e-118 353
Msa0589460 AT2G44480.2 42.543 409 169 4 71 413 1 409 2.41e-115 343
Msa0589460 AT1G51470.1 40.213 470 205 7 16 410 41 509 5.08e-115 346
Msa0589460 AT3G18080.1 40.881 477 194 9 20 413 39 510 5.77e-115 346
Msa0589460 AT2G44460.1 41.068 487 202 7 10 411 19 505 1.67e-114 347
Msa0589460 AT1G47600.1 40.000 470 206 7 16 410 41 509 5.42e-114 343
Msa0589460 AT1G47600.2 40.000 470 205 8 16 410 41 508 1.15e-112 340
Msa0589460 AT3G09260.1 39.104 491 210 8 7 412 26 512 1.20e-112 340
Msa0589460 AT2G44470.3 38.650 489 214 9 8 410 17 505 6.96e-112 340
Msa0589460 AT1G66280.1 40.377 478 197 8 19 410 35 510 8.06e-112 338
Msa0589460 AT3G18070.1 40.377 478 195 10 20 414 30 500 1.11e-111 337
Msa0589460 AT3G18070.3 40.167 478 190 10 20 414 30 494 1.26e-110 334
Msa0589460 AT3G21370.1 38.866 494 208 9 7 411 24 512 1.32e-110 335
Msa0589460 AT1G66270.1 39.331 478 202 8 19 410 35 510 2.75e-110 334
Msa0589460 AT1G52400.3 38.008 492 215 9 7 411 28 516 1.01e-109 333
Msa0589460 AT1G52400.1 38.008 492 215 9 7 411 28 516 1.01e-109 333
Msa0589460 AT3G60130.2 42.271 414 168 6 65 411 40 449 3.05e-109 329
Msa0589460 AT3G03640.1 38.525 488 212 8 12 411 26 513 2.18e-108 330
Msa0589460 AT1G66270.2 39.121 478 201 9 19 410 35 508 8.28e-108 328
Msa0589460 AT3G60130.3 42.432 403 172 5 65 411 40 438 6.68e-107 323
Msa0589460 AT2G32860.1 36.364 495 225 9 10 416 84 576 1.57e-105 325
Msa0589460 AT5G28510.1 37.449 494 217 8 7 410 28 519 4.28e-105 321
Msa0589460 AT2G32860.2 36.217 497 224 10 10 416 84 577 1.81e-104 322
Msa0589460 AT1G02850.2 38.559 472 205 10 17 411 23 486 1.26e-103 316
Msa0589460 AT1G61820.1 36.992 492 221 9 8 413 19 507 3.78e-103 316
Msa0589460 AT5G54570.2 41.463 410 168 6 71 410 1 408 2.60e-102 311
Msa0589460 AT5G25980.2 37.605 476 213 9 19 411 49 523 8.70e-101 310
Msa0589460 AT1G02850.5 36.694 496 206 10 16 411 22 509 2.24e-100 308
Msa0589460 AT5G26000.1 37.815 476 209 9 20 410 38 511 7.44e-100 308
Msa0589460 AT3G62750.1 37.234 470 217 10 9 410 14 473 9.30e-100 306
Msa0589460 AT3G62750.2 37.234 470 217 10 9 410 40 499 2.41e-99 306
Msa0589460 AT1G02850.4 36.620 497 206 11 16 411 22 510 1.39e-98 304
Msa0589460 AT4G21760.2 36.765 476 210 10 25 416 59 527 1.77e-97 302
Msa0589460 AT4G27830.1 35.759 481 222 8 9 410 12 484 8.39e-97 299
Msa0589460 AT1G02850.1 37.580 471 184 10 17 411 23 459 1.27e-96 297
Msa0589460 AT4G21760.1 37.124 466 212 10 25 416 59 517 1.80e-95 296
Msa0589460 AT1G61810.1 36.667 480 216 8 20 413 33 510 2.79e-94 293
Msa0589460 AT4G27820.1 35.849 477 219 9 11 410 16 482 2.52e-93 290
Msa0589460 AT5G54570.3 37.209 430 182 7 14 357 24 451 2.75e-92 286
Msa0589460 AT4G22100.1 36.034 469 218 10 21 413 23 485 6.50e-92 286
Msa0589460 AT5G24540.2 39.480 423 170 7 20 356 32 454 4.51e-91 283
Msa0589460 AT1G45191.4 36.268 477 222 9 5 411 20 484 7.72e-91 283
Msa0589460 AT1G45191.2 36.439 483 219 11 5 411 20 490 1.83e-89 280
Msa0589460 AT3G62740.1 34.105 475 230 10 9 410 14 478 2.15e-89 280
Msa0589460 AT2G44470.1 36.636 434 190 8 8 356 17 450 8.54e-89 276
Msa0589460 AT1G45191.6 36.066 488 219 11 5 411 20 495 1.41e-88 278
Msa0589460 AT1G61810.3 36.761 457 202 7 20 390 33 488 2.21e-88 278
Msa0589460 AT1G60090.2 35.408 466 221 9 20 411 24 483 3.02e-88 277
Msa0589460 AT3G60140.2 39.898 391 150 7 16 321 22 412 1.35e-87 274
Msa0589460 AT1G45191.1 35.800 500 216 12 5 411 20 507 1.07e-86 273
Msa0589460 AT2G44450.2 40.336 357 143 5 124 414 1 353 1.52e-86 268
Msa0589460 AT1G60090.1 34.755 469 227 10 20 411 24 490 1.48e-85 270
Msa0589460 AT2G44480.4 44.590 305 127 4 17 279 63 367 8.67e-85 265
Msa0589460 AT1G52400.2 36.009 436 190 8 7 356 28 460 9.29e-85 266
Msa0589460 AT4G27830.2 36.386 404 185 6 71 410 1 396 3.65e-84 264
Msa0589460 AT3G62750.6 36.869 396 186 7 71 410 1 388 2.79e-82 258
Msa0589460 AT3G62750.5 36.869 396 186 7 71 410 1 388 2.79e-82 258
Msa0589460 AT5G25980.3 35.714 420 188 7 19 357 49 467 1.16e-81 259
Msa0589460 AT5G25980.1 35.714 420 188 7 19 357 49 467 1.16e-81 259
Msa0589460 AT3G62750.4 35.885 418 191 9 9 359 40 447 4.11e-81 257
Msa0589460 AT1G61810.5 36.650 412 190 6 71 413 1 410 5.49e-81 255
Msa0589460 AT5G26000.2 35.629 421 186 7 20 357 38 456 1.97e-79 253
Msa0589460 AT4G27820.2 35.556 405 188 6 71 410 1 397 6.20e-79 250
Msa0589460 AT4G27820.3 35.556 405 188 6 71 410 1 397 6.20e-79 250
Msa0589460 AT2G44470.2 40.810 321 147 6 8 285 17 337 1.07e-78 249
Msa0589460 AT3G62750.7 40.000 315 156 6 9 294 14 324 2.08e-76 242
Msa0589460 AT3G62750.8 40.000 315 156 6 9 294 14 324 2.08e-76 242
Msa0589460 AT1G02850.3 36.139 404 157 8 17 321 23 424 3.20e-76 244
Msa0589460 AT3G62750.3 40.000 315 156 6 9 294 40 350 1.96e-75 241
Msa0589460 AT2G44460.2 39.833 359 147 5 122 411 1 359 2.50e-74 239
Msa0589460 AT3G62740.2 33.656 413 192 9 9 349 14 416 3.68e-73 235
Msa0589460 AT1G61820.3 35.792 366 165 5 117 413 4 368 3.08e-72 231
Msa0589460 AT3G18070.4 41.042 307 136 6 20 285 30 332 1.85e-71 229
Msa0589460 AT5G48375.1 35.194 412 175 10 19 375 37 411 1.06e-70 229
Msa0589460 AT1G45191.5 39.937 318 146 6 5 285 20 329 9.87e-70 226
Msa0589460 AT1G45191.3 39.937 318 146 6 5 285 20 329 1.16e-69 226
Msa0589460 AT2G44480.5 39.711 277 125 3 179 413 29 305 3.24e-66 214
Msa0589460 AT1G60270.1 39.474 304 144 5 20 285 24 325 1.14e-65 214
Msa0589460 AT1G61810.4 33.763 388 170 7 20 321 33 419 3.70e-63 209
Msa0589460 AT3G18070.2 37.237 333 139 6 149 414 94 423 3.90e-63 209
Msa0589460 AT3G18070.7 39.785 279 122 5 179 414 36 311 2.52e-59 196
Msa0589460 AT1G61810.2 37.918 269 124 5 20 246 33 300 1.25e-52 178
Msa0589460 AT1G60270.2 40.000 240 117 3 71 285 1 238 1.24e-51 175
Msa0589460 AT1G51490.1 36.242 298 144 9 27 285 27 317 1.34e-50 176
Msa0589460 AT5G16580.1 30.686 277 130 6 149 367 27 299 4.38e-33 126
Msa0589460 AT3G18070.5 32.780 241 95 4 149 322 94 334 3.78e-32 125
Msa0589460 AT3G06510.1 26.190 378 229 10 66 415 159 514 1.91e-29 120
Msa0589460 AT3G18070.6 35.294 187 78 3 179 322 36 222 2.61e-28 111
Msa0589460 AT3G06510.2 25.062 403 236 11 66 415 159 548 4.69e-28 117

Find 90 sgRNAs with CRISPR-Local

Find 610 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGAACATAATAGAATTAT+TGG 0.142938 4_2:+12394845 Msa0589460:CDS
GATATTTGCTTCCTGGAATT+TGG 0.177328 4_2:+12393208 Msa0589460:CDS
ACCATTATCATAACAGAAAA+TGG 0.263997 4_2:+12394219 Msa0589460:CDS
GGGGAAGATCCCAATGAAAA+AGG 0.264707 4_2:-12392650 None:intergenic
GCTTTGTCAGCGAGAATATT+AGG 0.282531 4_2:+12392697 Msa0589460:CDS
CAAAGCTCACACAATATTAT+TGG 0.290894 4_2:-12394890 None:intergenic
ATACTTTGCATGGTCCCTTT+TGG 0.290939 4_2:+12394709 Msa0589460:CDS
CAGGGTCAAAATGGTGTAAT+AGG 0.298560 4_2:+12393364 Msa0589460:CDS
ACGAAATATCAGGGTCAAAA+TGG 0.301030 4_2:+12393355 Msa0589460:CDS
CTTTGTGGATATTTGCTTCC+TGG 0.303992 4_2:+12393201 Msa0589460:CDS
TACAAAACGTACCTGGTAAT+TGG 0.306037 4_2:-12387163 None:intergenic
TGTTTGTCCAAAAGGGATTC+AGG 0.306903 4_2:+12394158 Msa0589460:CDS
GACGGATACACTGTGCGTTT+TGG 0.311280 4_2:+12394749 Msa0589460:CDS
GACGCCCTTGATTTCATGTT+TGG 0.312958 4_2:+12393454 Msa0589460:CDS
AGTAGGTCCTGAATCCCTTT+TGG 0.348435 4_2:-12394165 None:intergenic
CAAGCCTTACAAGATGATTA+TGG 0.348583 4_2:+12392672 Msa0589460:CDS
TCTAATGGGTCAGTTGAGTA+TGG 0.348923 4_2:-12393415 None:intergenic
TGGCTATATGTTTGTCCAAA+AGG 0.350579 4_2:+12394150 Msa0589460:CDS
AATGTATAAAACGAAATATC+AGG 0.351551 4_2:+12393345 Msa0589460:CDS
ATAATCATCTTGTAAGGCTT+GGG 0.354884 4_2:-12392670 None:intergenic
ATCGATGAGCTACTTAATAA+TGG 0.365239 4_2:+12392519 Msa0589460:CDS
AGCTCTCTGCCCGATGGTTT+AGG 0.372347 4_2:+12394816 Msa0589460:CDS
TGATCACTATCATCGTTATA+AGG 0.379609 4_2:+12388474 Msa0589460:CDS
TTGTAAAATCTAATTCCGTC+TGG 0.379933 4_2:-12392489 None:intergenic
CAATATCCTTGGCCAAGATA+TGG 0.382965 4_2:-12392345 None:intergenic
AGGCAAGGTGTGAATGTAAA+AGG 0.387936 4_2:+12394686 Msa0589460:intron
ACATAAGACACCATGCTTGC+TGG 0.388660 4_2:-12393605 None:intergenic
CTATTACTTGGCAATATCCT+TGG 0.390771 4_2:-12392356 None:intergenic
TTACTTTGTCTCCAAATTCC+AGG 0.398270 4_2:-12393219 None:intergenic
TCCATTCAAAGTTGTCCAAA+AGG 0.405927 4_2:-12394724 None:intergenic
CATACAGATTCTCCATATCT+TGG 0.418726 4_2:+12392333 Msa0589460:CDS
CATAATCATCTTGTAAGGCT+TGG 0.430388 4_2:-12392671 None:intergenic
GGCTATATGTTTGTCCAAAA+GGG 0.435266 4_2:+12394151 Msa0589460:CDS
AACCATCGGGCAGAGAGCTT+AGG 0.440435 4_2:-12394812 None:intergenic
GATTGCTCTTGAGTGAACTT+TGG 0.449878 4_2:-12393641 None:intergenic
TTGGAGACAAAGTAAAGCAT+TGG 0.451185 4_2:+12393227 Msa0589460:CDS
TGGAGACAAAGTAAAGCATT+GGG 0.453879 4_2:+12393228 Msa0589460:CDS
TATTAAGTAGCTCATCGATC+AGG 0.456055 4_2:-12392515 None:intergenic
GCATAAATAGAGGAAATAAC+AGG 0.457668 4_2:-12387078 None:intergenic
ACCATCGGGCAGAGAGCTTA+GGG 0.457955 4_2:-12394811 None:intergenic
TTTATACAACCACTGACAAC+AGG 0.469475 4_2:+12393575 Msa0589460:CDS
CAAAATGGTGTAATAGGCAT+TGG 0.471411 4_2:+12393370 Msa0589460:CDS
ACCATCCAAACATGAAATCA+AGG 0.473106 4_2:-12393459 None:intergenic
AGCAAGCATGGTGTCTTATG+TGG 0.473776 4_2:+12393607 Msa0589460:CDS
ATCACTCGAAGAGGCGCTCA+TGG 0.478154 4_2:+12394491 Msa0589460:CDS
GCCTCCATAATCATCTTGTA+AGG 0.480473 4_2:-12392676 None:intergenic
ACATGAAATCAAGGGCGTCT+TGG 0.480862 4_2:-12393450 None:intergenic
ACACTTTGAGTACATCAGAT+TGG 0.486476 4_2:+12393275 Msa0589460:CDS
ATGACAGATGTGAATAAAGA+AGG 0.487306 4_2:+12394029 Msa0589460:intron
GCATTGGATTAAACTCTCAC+TGG 0.490284 4_2:+12393386 Msa0589460:CDS
CCATTCAAAGTTGTCCAAAA+GGG 0.499789 4_2:-12394723 None:intergenic
CCCTTGATTTCATGTTTGGA+TGG 0.504970 4_2:+12393458 Msa0589460:CDS
TGTAAAATCTAATTCCGTCT+GGG 0.505528 4_2:-12392488 None:intergenic
AACTTTGTTGATTATGACAA+TGG 0.506223 4_2:+12394776 Msa0589460:CDS
AAAACTGTCAGCATAAATAG+AGG 0.516772 4_2:-12387088 None:intergenic
GTACTCAAAGTGTAAGAGAA+TGG 0.519200 4_2:-12393265 None:intergenic
GACAACTTTGAATGGAATGA+CGG 0.527539 4_2:+12394731 Msa0589460:CDS
CATCTGCATGAGCAAGAAGT+TGG 0.530133 4_2:-12393315 None:intergenic
AATAAAGAAGGGACATACAT+TGG 0.535899 4_2:+12394041 Msa0589460:CDS
TACTGGCTCCTCCAATTACC+AGG 0.536244 4_2:+12387152 Msa0589460:CDS
AATATGTGCAGGCTGCAACT+TGG 0.539391 4_2:+12394130 Msa0589460:intron
AAGAAACTTCCTAAACCATC+GGG 0.539660 4_2:-12394825 None:intergenic
CAAGAAACTTCCTAAACCAT+CGG 0.543501 4_2:-12394826 None:intergenic
ATGCAGAAGGAAAACTAAGT+GGG 0.545587 4_2:+12392457 Msa0589460:intron
TTTCCTTTGTGTACAACAGT+AGG 0.554600 4_2:-12394182 None:intergenic
GAAATCAAGGGCGTCTTGGA+CGG 0.557749 4_2:-12393446 None:intergenic
GAAGTTGGTTGTGTGTTGAC+TGG 0.560031 4_2:-12393300 None:intergenic
ACTGCATACAGGGAAGGTAA+AGG 0.566891 4_2:+12388426 Msa0589460:intron
GATTCTCCATATCTTGGCCA+AGG 0.571513 4_2:+12392339 Msa0589460:CDS
ATGTATAAAACGAAATATCA+GGG 0.576545 4_2:+12393346 Msa0589460:CDS
TGACAGATGTGAATAAAGAA+GGG 0.582527 4_2:+12394030 Msa0589460:intron
ACAATGTTACAAAACGTACC+TGG 0.584683 4_2:-12387170 None:intergenic
AGGAGAGTATCCAGCAAGCA+TGG 0.588296 4_2:+12393595 Msa0589460:CDS
TATGCAGAAGGAAAACTAAG+TGG 0.588404 4_2:+12392456 Msa0589460:intron
AAAACGTACCTGGTAATTGG+AGG 0.599628 4_2:-12387160 None:intergenic
CATACAGGGAAGGTAAAGGA+TGG 0.601036 4_2:+12388430 Msa0589460:intron
GGATACTCTCCTGTTGTCAG+TGG 0.601924 4_2:-12393584 None:intergenic
AGGGACATACATTGGACCAT+GGG 0.608719 4_2:+12394049 Msa0589460:CDS
GCAAGCATGGTGTCTTATGT+GGG 0.610839 4_2:+12393608 Msa0589460:CDS
TGCAGAAGGAAAACTAAGTG+GGG 0.612476 4_2:+12392458 Msa0589460:intron
TAATCATCTTGTAAGGCTTG+GGG 0.615173 4_2:-12392669 None:intergenic
ACCCTAAGCTCTCTGCCCGA+TGG 0.617320 4_2:+12394810 Msa0589460:CDS
ATGTAAAAGGATACTTTGCA+TGG 0.622027 4_2:+12394699 Msa0589460:CDS
TCCAACACTATCACTCGAAG+AGG 0.624433 4_2:+12394482 Msa0589460:CDS
GCCTTACAAGATGATTATGG+AGG 0.632737 4_2:+12392675 Msa0589460:CDS
CCATCCAAACATGAAATCAA+GGG 0.640294 4_2:-12393458 None:intergenic
AAGGGACATACATTGGACCA+TGG 0.642394 4_2:+12394048 Msa0589460:CDS
GCCTCTTCGAGTGATAGTGT+TGG 0.646940 4_2:-12394483 None:intergenic
GGACCTACTGTTGTACACAA+AGG 0.659998 4_2:+12394179 Msa0589460:CDS
GCAGAAGGAAAACTAAGTGG+GGG 0.675074 4_2:+12392459 Msa0589460:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAGATAAAAAAAAATTGA+AGG - chr4_2:12387981-12388000 None:intergenic 10.0%
!!! TCAATTTTTTTTTATCTATT+TGG + chr4_2:12387981-12388000 Msa0589460:intron 10.0%
!!! TATTTTTTTTTTTACACTAT+CGG - chr4_2:12388216-12388235 None:intergenic 10.0%
!!! AAAATTATTTGATTTTTTGA+AGG - chr4_2:12388606-12388625 None:intergenic 10.0%
!!! ATTTTACTTTCTATTATATT+AGG + chr4_2:12388719-12388738 Msa0589460:intron 10.0%
!!! TATTTTTTCTTCTAAAATTT+GGG - chr4_2:12389036-12389055 None:intergenic 10.0%
!!! TTATTTTTTCTTCTAAAATT+TGG - chr4_2:12389037-12389056 None:intergenic 10.0%
!!! AATTCAAAGAATTTTTTTTT+GGG - chr4_2:12390109-12390128 None:intergenic 10.0%
!!! AAATTCAAAGAATTTTTTTT+TGG - chr4_2:12390110-12390129 None:intergenic 10.0%
!! AAAAAAAAATTCTTTGAATT+TGG + chr4_2:12390109-12390128 Msa0589460:intron 10.0%
!! ATAAAACAAATAAATTGATA+GGG + chr4_2:12391910-12391929 Msa0589460:intron 10.0%
!! TTCATAATAATATAAATTGA+TGG + chr4_2:12392594-12392613 Msa0589460:intron 10.0%
!! ATTCAAGAAATAATAAATTA+AGG + chr4_2:12393104-12393123 Msa0589460:intron 10.0%
!! TTCTAATAAATTTAAATCAT+AGG + chr4_2:12394441-12394460 Msa0589460:intron 10.0%
!!! TTGACTATATTATTATTTTT+TGG + chr4_2:12394651-12394670 Msa0589460:intron 10.0%
!!! ATCACTTATTTTAATAAAAA+AGG - chr4_2:12395119-12395138 None:intergenic 10.0%
!!! GGAATTAAACATAATTTTTT+TGG - chr4_2:12387266-12387285 None:intergenic 15.0%
!! AAGAAAAAAATATATATACC+TGG - chr4_2:12387592-12387611 None:intergenic 15.0%
!!! TTTATTTTTATAGCTGTATA+TGG - chr4_2:12387710-12387729 None:intergenic 15.0%
!!! TTTTTTTTTTTGTTGAAAGA+AGG - chr4_2:12388502-12388521 None:intergenic 15.0%
!! CAAAAAAAAAAATCGTTATA+AGG + chr4_2:12388510-12388529 Msa0589460:intron 15.0%
!!! AAATAATTTTAGTGATCAAA+AGG + chr4_2:12388616-12388635 Msa0589460:intron 15.0%
!!! TATTTTTCATTATCTTCTTT+GGG - chr4_2:12389136-12389155 None:intergenic 15.0%
!!! ATATTTTTCATTATCTTCTT+TGG - chr4_2:12389137-12389156 None:intergenic 15.0%
!! AAGATAATGAAAAATATTCA+AGG + chr4_2:12389140-12389159 Msa0589460:intron 15.0%
!!! ATTCAAAGAATTTTTTTTTG+GGG - chr4_2:12390108-12390127 None:intergenic 15.0%
!!! TATGAAAATGTTATTTCAAA+GGG - chr4_2:12390587-12390606 None:intergenic 15.0%
!!! TAAAAACAAGTGATTATTTT+TGG - chr4_2:12391868-12391887 None:intergenic 15.0%
!! GATAAAACAAATAAATTGAT+AGG + chr4_2:12391909-12391928 Msa0589460:intron 15.0%
!! ATGTTTAGTTATTGTAAAAT+GGG - chr4_2:12391951-12391970 None:intergenic 15.0%
!! TATGTTTAGTTATTGTAAAA+TGG - chr4_2:12391952-12391971 None:intergenic 15.0%
!!! TATTTCATTCTAAAAGTTTA+CGG + chr4_2:12391970-12391989 Msa0589460:intron 15.0%
!!! ATTAAACATTTTCTATTACT+TGG - chr4_2:12392371-12392390 None:intergenic 15.0%
!! GTAATAGAAAATGTTTAATT+TGG + chr4_2:12392372-12392391 Msa0589460:intron 15.0%
!! TATGATATACTAATAAAGTA+TGG - chr4_2:12392559-12392578 None:intergenic 15.0%
!! AAATAATTTATGTCAAACAA+GGG - chr4_2:12393997-12394016 None:intergenic 15.0%
!!! TTTTGATTTAAGTAAATAGA+GGG - chr4_2:12394581-12394600 None:intergenic 15.0%
!!! ATTTTGATTTAAGTAAATAG+AGG - chr4_2:12394582-12394601 None:intergenic 15.0%
!!! TTTAAGACATGTTTTTTCTT+TGG - chr4_2:12387306-12387325 None:intergenic 20.0%
!!! TTTCTATTTCTCTAAATTTC+TGG - chr4_2:12387342-12387361 None:intergenic 20.0%
!!! ATAGAAAGTAATACTTTTTC+CGG + chr4_2:12387355-12387374 Msa0589460:intron 20.0%
!!! TCTTTTCTTATATTTTAGAC+CGG - chr4_2:12387377-12387396 None:intergenic 20.0%
!! TATTGAATCTTAAGAATTTG+AGG + chr4_2:12387472-12387491 Msa0589460:intron 20.0%
!! AAAAAAAAATTGAAGGTCTT+GGG - chr4_2:12387974-12387993 None:intergenic 20.0%
!! TAAAAAAAAATTGAAGGTCT+TGG - chr4_2:12387975-12387994 None:intergenic 20.0%
!! ATATAAATCATCTGAAAGTT+TGG - chr4_2:12388082-12388101 None:intergenic 20.0%
!! GAAATTATATATCACATTAG+AGG - chr4_2:12388538-12388557 None:intergenic 20.0%
!! GTAAAATAAATGTATGCTAT+TGG + chr4_2:12388657-12388676 Msa0589460:intron 20.0%
!! AAAAAGTCTATGACTAAAAA+TGG - chr4_2:12388779-12388798 None:intergenic 20.0%
!!! GTTTTTTTTTCCTTTCTTAA+GGG - chr4_2:12388885-12388904 None:intergenic 20.0%
!! TTTATTGCTAGAAAATTAAG+GGG - chr4_2:12388966-12388985 None:intergenic 20.0%
!! GTTTATTGCTAGAAAATTAA+GGG - chr4_2:12388967-12388986 None:intergenic 20.0%
!! TTAATTGCCAAGATAAAATT+TGG + chr4_2:12389371-12389390 Msa0589460:intron 20.0%
!!! AAAAAGTCCAAATTTTATCT+TGG - chr4_2:12389381-12389400 None:intergenic 20.0%
!!! AAGATAAAATTTGGACTTTT+TGG + chr4_2:12389380-12389399 Msa0589460:intron 20.0%
!!! AGATAAAATTTGGACTTTTT+GGG + chr4_2:12389381-12389400 Msa0589460:intron 20.0%
!! ATTGGAAAATTGGATAATAA+AGG + chr4_2:12389695-12389714 Msa0589460:intron 20.0%
!!! GAGCTATATTGAAAATTTTA+AGG + chr4_2:12389995-12390014 Msa0589460:intron 20.0%
!!! GATTTTAATTAATTCGGTTT+TGG - chr4_2:12390199-12390218 None:intergenic 20.0%
!!! ATGAAAATGTTATTTCAAAG+GGG - chr4_2:12390586-12390605 None:intergenic 20.0%
!!! GTATGAAAATGTTATTTCAA+AGG - chr4_2:12390588-12390607 None:intergenic 20.0%
!! ATCAAGTGGAAATAATAAAA+CGG - chr4_2:12390670-12390689 None:intergenic 20.0%
!!! AATATTTCGATTCTAGTTAA+CGG - chr4_2:12390704-12390723 None:intergenic 20.0%
!!! CAAAAAATGTTTGATTTTCA+AGG - chr4_2:12390843-12390862 None:intergenic 20.0%
!!! TCAATTTTTTAAAGCGATAA+GGG - chr4_2:12391171-12391190 None:intergenic 20.0%
!!! TTCAATTTTTTAAAGCGATA+AGG - chr4_2:12391172-12391191 None:intergenic 20.0%
!!! TTATCGCTTTAAAAAATTGA+AGG + chr4_2:12391171-12391190 Msa0589460:intron 20.0%
!!! TAAAAAATTGAAGGTTCTAA+AGG + chr4_2:12391180-12391199 Msa0589460:intron 20.0%
!!! AAAAAATTGAAGGTTCTAAA+GGG + chr4_2:12391181-12391200 Msa0589460:intron 20.0%
!! ATTTATTAGAAAGTGGAATA+AGG + chr4_2:12391204-12391223 Msa0589460:intron 20.0%
!!! GATTATTTTTGGTTTCTTAT+AGG - chr4_2:12391857-12391876 None:intergenic 20.0%
!!! TAAAATGGGATTCTTTATTT+TGG - chr4_2:12391937-12391956 None:intergenic 20.0%
!! ATTCTAATGTTAGTTAGTTA+TGG - chr4_2:12393058-12393077 None:intergenic 20.0%
!!! TATATGCAGAAAAGATTTTA+AGG + chr4_2:12393177-12393196 Msa0589460:intron 20.0%
!! AATGTATAAAACGAAATATC+AGG + chr4_2:12393345-12393364 Msa0589460:CDS 20.0%
!! ATGTATAAAACGAAATATCA+GGG + chr4_2:12393346-12393365 Msa0589460:CDS 20.0%
!!! AATTTTATTTATCTGTTTGC+AGG + chr4_2:12393552-12393571 Msa0589460:intron 20.0%
!!! TGTTTTCAAAATTGTTAATG+TGG + chr4_2:12393887-12393906 Msa0589460:intron 20.0%
!! GAAATAATTTATGTCAAACA+AGG - chr4_2:12393998-12394017 None:intergenic 20.0%
!! TGTTTGACATAAATTATTTC+TGG + chr4_2:12393998-12394017 Msa0589460:intron 20.0%
!! CTTGAACATAATAGAATTAT+TGG + chr4_2:12394845-12394864 Msa0589460:CDS 20.0%
!! TTTAATATAGTCATATGTGT+AGG + chr4_2:12395353-12395372 Msa0589460:intron 20.0%
!! TTTGAGTAAAAAAAAAGTCT+TGG + chr4_2:12395509-12395528 Msa0589460:intron 20.0%
!!! TATGCTTTTGCTTTTTGTAA+CGG + chr4_2:12387233-12387252 Msa0589460:intron 25.0%
! AATTCCTAATGCTATAAGAT+TGG + chr4_2:12387280-12387299 Msa0589460:intron 25.0%
! AATATATATACCTGGTGTAT+GGG - chr4_2:12387584-12387603 None:intergenic 25.0%
! AAATATATATACCTGGTGTA+TGG - chr4_2:12387585-12387604 None:intergenic 25.0%
!! ATTTTTATAGCTGTATATGG+TGG - chr4_2:12387707-12387726 None:intergenic 25.0%
! GACAATGCATAATATATACA+AGG - chr4_2:12387821-12387840 None:intergenic 25.0%
! TGTAGACTGATTATAATTGA+GGG - chr4_2:12388030-12388049 None:intergenic 25.0%
! ATGTAGACTGATTATAATTG+AGG - chr4_2:12388031-12388050 None:intergenic 25.0%
!! AGATTTTATAGACAAGTCAT+AGG + chr4_2:12388136-12388155 Msa0589460:intron 25.0%
!! TCTTTTCTTCAATATCTAAC+AGG - chr4_2:12388300-12388319 None:intergenic 25.0%
! GACTAAAATGATTTGATCTA+CGG - chr4_2:12388584-12388603 None:intergenic 25.0%
!!! GGTTTTTTTTTCCTTTCTTA+AGG - chr4_2:12388886-12388905 None:intergenic 25.0%
! GGTTTATTGCTAGAAAATTA+AGG - chr4_2:12388968-12388987 None:intergenic 25.0%
! GGATAAAAAAACACCTAAAA+GGG - chr4_2:12389115-12389134 None:intergenic 25.0%
!!! CTTTTTAAATGGATTGGAAT+GGG - chr4_2:12389195-12389214 None:intergenic 25.0%
!!! ACTTTTTAAATGGATTGGAA+TGG - chr4_2:12389196-12389215 None:intergenic 25.0%
!!! TATGCACTTTTTAAATGGAT+TGG - chr4_2:12389201-12389220 None:intergenic 25.0%
!!! TTTGGTATGCACTTTTTAAA+TGG - chr4_2:12389206-12389225 None:intergenic 25.0%
!! GATAAAATTTGGACTTTTTG+GGG + chr4_2:12389382-12389401 Msa0589460:intron 25.0%
!!! AGAAAAGAGTATTGGAAAAT+TGG + chr4_2:12389685-12389704 Msa0589460:intron 25.0%
! ATTATCAAACATGTGGAAAT+TGG - chr4_2:12389888-12389907 None:intergenic 25.0%
! AATTGTGATTATCAAACATG+TGG - chr4_2:12389895-12389914 None:intergenic 25.0%
! TTTGAAGAAGAAGAATACTT+GGG - chr4_2:12390077-12390096 None:intergenic 25.0%
! AGAAAAGAAAGGAAGAAAAT+TGG + chr4_2:12390165-12390184 Msa0589460:intron 25.0%
!!! GAGGGTGATTTTAATTAATT+CGG - chr4_2:12390205-12390224 None:intergenic 25.0%
!! ACTTTTCTTAAGTGTAAAGT+AGG - chr4_2:12390359-12390378 None:intergenic 25.0%
! TACTTTACACTTAAGAAAAG+TGG + chr4_2:12390358-12390377 Msa0589460:intron 25.0%
!! TTTCTAAAAGTAGCTTGATA+GGG - chr4_2:12390416-12390435 None:intergenic 25.0%
!!! TTTTCTAAAAGTAGCTTGAT+AGG - chr4_2:12390417-12390436 None:intergenic 25.0%
!!! TGAATTTTTTTGGTGTATGA+AGG - chr4_2:12390484-12390503 None:intergenic 25.0%
! ATAATAAAACGGCTTAAACA+AGG - chr4_2:12390659-12390678 None:intergenic 25.0%
!!! TTTGTGACAAATGGATTAAT+TGG - chr4_2:12390751-12390770 None:intergenic 25.0%
!!! TTTTGAAAAGGCATATGATA+TGG - chr4_2:12390816-12390835 None:intergenic 25.0%
!!! AAAATGTTTGATTTTCAAGG+TGG - chr4_2:12390840-12390859 None:intergenic 25.0%
! CATTATAAATCCTAACCAAT+CGG - chr4_2:12390938-12390957 None:intergenic 25.0%
!!! CAATTTTTTAAAGCGATAAG+GGG - chr4_2:12391170-12391189 None:intergenic 25.0%
! TAAAGGGATTTATTAGAAAG+TGG + chr4_2:12391197-12391216 Msa0589460:intron 25.0%
! AATCAAAATTCACCAATCTT+TGG + chr4_2:12391338-12391357 Msa0589460:intron 25.0%
! ATCAAAATTCACCAATCTTT+GGG + chr4_2:12391339-12391358 Msa0589460:intron 25.0%
! TCGAATATGATTAAGTAGAA+TGG + chr4_2:12391825-12391844 Msa0589460:intron 25.0%
! TGTAAAATTTACGAGAACAA+GGG - chr4_2:12392000-12392019 None:intergenic 25.0%
! ATGTAAAATTTACGAGAACA+AGG - chr4_2:12392001-12392020 None:intergenic 25.0%
!! TTGTAGTATTTTACATGAAG+TGG + chr4_2:12392068-12392087 Msa0589460:intron 25.0%
!!! AACCATTTTTACATCTTAAC+AGG + chr4_2:12392274-12392293 Msa0589460:intron 25.0%
! TTCCTGTTAAGATGTAAAAA+TGG - chr4_2:12392279-12392298 None:intergenic 25.0%
!! CGAGAAAGATTAAAATGTTT+TGG + chr4_2:12392766-12392785 Msa0589460:intron 25.0%
!! CTTTAGAGATGAAACTATAA+AGG + chr4_2:12392840-12392859 Msa0589460:intron 25.0%
! TAACTAACTAGTTAGTTAGT+TGG - chr4_2:12392992-12393011 None:intergenic 25.0%
! ATAAATCCAACTATGTTTGT+TGG - chr4_2:12393035-12393054 None:intergenic 25.0%
!!! AAAAGATTTTAAGGACTTTG+TGG + chr4_2:12393186-12393205 Msa0589460:CDS 25.0%
!! ATTGGGTCATATGATTTTAT+TGG + chr4_2:12393674-12393693 Msa0589460:intron 25.0%
! AATAACTAAACAATATGTGC+AGG + chr4_2:12394119-12394138 Msa0589460:intron 25.0%
!!! TTTTCTGTTATGATAATGGT+AGG - chr4_2:12394219-12394238 None:intergenic 25.0%
! ACCATTATCATAACAGAAAA+TGG + chr4_2:12394219-12394238 Msa0589460:CDS 25.0%
!! ACCATTTTCTGTTATGATAA+TGG - chr4_2:12394223-12394242 None:intergenic 25.0%
! ATACATTGTGAGAGAATATT+AGG - chr4_2:12394377-12394396 None:intergenic 25.0%
! GTTTATAAGACACTGAAAAA+AGG - chr4_2:12394408-12394427 None:intergenic 25.0%
!! ATTATCTTTTATCTGCAATG+AGG + chr4_2:12394550-12394569 Msa0589460:CDS 25.0%
!!! TTTTTTGGTTTTTTGTGTGA+AGG + chr4_2:12394666-12394685 Msa0589460:intron 25.0%
!! AACTTTGTTGATTATGACAA+TGG + chr4_2:12394776-12394795 Msa0589460:CDS 25.0%
! TATGACTATATTAAAGTCTC+TGG - chr4_2:12395348-12395367 None:intergenic 25.0%
!! TCATGTTCTGTTTTGTAATA+AGG + chr4_2:12395616-12395635 Msa0589460:three_prime_UTR 25.0%
GCATAAATAGAGGAAATAAC+AGG - chr4_2:12387081-12387100 None:intergenic 30.0%
AAAACTGTCAGCATAAATAG+AGG - chr4_2:12387091-12387110 None:intergenic 30.0%
!! GTGTTGATAATGTAGTATGA+AGG + chr4_2:12387511-12387530 Msa0589460:intron 30.0%
!!! CTTGCCTTAGGAATTTTTTT+TGG + chr4_2:12387770-12387789 Msa0589460:intron 30.0%
ACCACCAAAAAAAATTCCTA+AGG - chr4_2:12387777-12387796 None:intergenic 30.0%
!!! TTAGGAATTTTTTTTGGTGG+TGG + chr4_2:12387776-12387795 Msa0589460:intron 30.0%
TGCATAATATATACAAGGTC+CGG - chr4_2:12387816-12387835 None:intergenic 30.0%
TAATTGTTGTAACTGCATAC+AGG + chr4_2:12388415-12388434 Msa0589460:intron 30.0%
AATTGTTGTAACTGCATACA+GGG + chr4_2:12388416-12388435 Msa0589460:intron 30.0%
TGATCACTATCATCGTTATA+AGG + chr4_2:12388474-12388493 Msa0589460:CDS 30.0%
! TAGATAATGAGAGAAGTACA+TGG + chr4_2:12388817-12388836 Msa0589460:intron 30.0%
!!! TTGTACTTTTTCCGATTTGT+GGG - chr4_2:12388852-12388871 None:intergenic 30.0%
! ACAAATCGGAAAAAGTACAA+GGG + chr4_2:12388852-12388871 Msa0589460:intron 30.0%
AACCATTTGTAAGACAAACA+AGG + chr4_2:12388939-12388958 Msa0589460:intron 30.0%
!! TTTCTTCTAAAATTTGGGAG+CGG - chr4_2:12389031-12389050 None:intergenic 30.0%
TGCAACAGTTTGGAAAATTT+GGG - chr4_2:12389075-12389094 None:intergenic 30.0%
ATGCAACAGTTTGGAAAATT+TGG - chr4_2:12389076-12389095 None:intergenic 30.0%
TAAAAGGGCTTACTTTCATT+TGG - chr4_2:12389100-12389119 None:intergenic 30.0%
! AAATGAAAGTAAGCCCTTTT+AGG + chr4_2:12389099-12389118 Msa0589460:intron 30.0%
GGGATAAAAAAACACCTAAA+AGG - chr4_2:12389116-12389135 None:intergenic 30.0%
!!! TTTTGTAGATGTAGCTTTGT+TGG - chr4_2:12389234-12389253 None:intergenic 30.0%
!! TCTTTATATGTCACTTTGAG+TGG - chr4_2:12389456-12389475 None:intergenic 30.0%
CTACTCTACTTGAGTTAAAA+AGG - chr4_2:12389531-12389550 None:intergenic 30.0%
! GTGGATAAAGAAAAGAGTAT+TGG + chr4_2:12389677-12389696 Msa0589460:intron 30.0%
!! GAAGAAAAGTATTGGTAATG+GGG - chr4_2:12389761-12389780 None:intergenic 30.0%
!! CGAAGAAAAGTATTGGTAAT+GGG - chr4_2:12389762-12389781 None:intergenic 30.0%
TGGAAATTGGCAAAATATGT+TGG - chr4_2:12389875-12389894 None:intergenic 30.0%
! GTATTGATGGCAAAATATGT+TGG - chr4_2:12389919-12389938 None:intergenic 30.0%
TTTGTGGAAAGATGTATTGA+TGG - chr4_2:12389932-12389951 None:intergenic 30.0%
ATTTGTAAACCAAAGGATGA+GGG - chr4_2:12390039-12390058 None:intergenic 30.0%
AATTTGTAAACCAAAGGATG+AGG - chr4_2:12390040-12390059 None:intergenic 30.0%
! CTTTGAAGAAGAAGAATACT+TGG - chr4_2:12390078-12390097 None:intergenic 30.0%
TAACAAAGTTTGGAAGTTGA+TGG - chr4_2:12390136-12390155 None:intergenic 30.0%
ATCAACTTCCAAACTTTGTT+AGG + chr4_2:12390135-12390154 Msa0589460:intron 30.0%
AAGGAAGAAAATTGGAATAG+AGG + chr4_2:12390173-12390192 Msa0589460:intron 30.0%
!! ACATGCTTTGGAAAAAAACT+TGG - chr4_2:12390261-12390280 None:intergenic 30.0%
! TTTTCCAAAGCATGTATTAC+CGG + chr4_2:12390266-12390285 Msa0589460:intron 30.0%
! TTTCCATGTATCAAGACTTT+TGG + chr4_2:12390289-12390308 Msa0589460:intron 30.0%
! TTCCATGTATCAAGACTTTT+GGG + chr4_2:12390290-12390309 Msa0589460:intron 30.0%
! TTTTACTTACCTTTGGTTGA+CGG - chr4_2:12390327-12390346 None:intergenic 30.0%
TCAACCAAAGGTAAGTAAAA+GGG + chr4_2:12390327-12390346 Msa0589460:intron 30.0%
! TAGATGGTTCCATTTGATTT+CGG - chr4_2:12390454-12390473 None:intergenic 30.0%
AAATCAAATGGAACCATCTA+AGG + chr4_2:12390454-12390473 Msa0589460:intron 30.0%
!!! AGGCTTGTGTTGAATTTTTT+TGG - chr4_2:12390494-12390513 None:intergenic 30.0%
TAAGGTTGAAAAATTGGATG+TGG - chr4_2:12390562-12390581 None:intergenic 30.0%
!! ATGTTATTTCAAAGGGGTTA+AGG - chr4_2:12390580-12390599 None:intergenic 30.0%
!! GATTAAAGCTTGTGTTTTTG+CGG - chr4_2:12390729-12390748 None:intergenic 30.0%
!! TTTCAAGGTGGATTTTGAAA+AGG - chr4_2:12390828-12390847 None:intergenic 30.0%
! CGATTGGTTAGGATTTATAA+TGG + chr4_2:12390936-12390955 Msa0589460:intron 30.0%
AAATAAGAAGAGAAACCTCT+TGG + chr4_2:12391086-12391105 Msa0589460:intron 30.0%
TATTAGAAAGTGGAATAAGG+AGG + chr4_2:12391207-12391226 Msa0589460:intron 30.0%
GAAAATCAAAGGGTTAATTG+TGG + chr4_2:12391249-12391268 Msa0589460:intron 30.0%
ATGTGAAGAATAAAGCCTTT+CGG + chr4_2:12391294-12391313 Msa0589460:intron 30.0%
TCAAAATTCACCAATCTTTG+GGG + chr4_2:12391340-12391359 Msa0589460:intron 30.0%
TTTGAGAGCTAAGATTGTAT+TGG - chr4_2:12391480-12391499 None:intergenic 30.0%
! ACAATCTTAGCTCTCAAAAT+TGG + chr4_2:12391482-12391501 Msa0589460:intron 30.0%
! AACTTTTCTCTTATGTTCAC+TGG + chr4_2:12391564-12391583 Msa0589460:intron 30.0%
! ACTTTTCTCTTATGTTCACT+GGG + chr4_2:12391565-12391584 Msa0589460:intron 30.0%
AACTCCAATTCATCCAAATT+AGG - chr4_2:12391596-12391615 None:intergenic 30.0%
TTGGAGTTCCTTTCATTAAA+AGG + chr4_2:12391608-12391627 Msa0589460:intron 30.0%
TGGAGTTCCTTTCATTAAAA+GGG + chr4_2:12391609-12391628 Msa0589460:intron 30.0%
GTTAGAGTTGTTAATGCATA+TGG - chr4_2:12392433-12392452 None:intergenic 30.0%
AACTCTAACAAATATGCAGA+AGG + chr4_2:12392444-12392463 Msa0589460:intron 30.0%
TGTAAAATCTAATTCCGTCT+GGG - chr4_2:12392491-12392510 None:intergenic 30.0%
TTGTAAAATCTAATTCCGTC+TGG - chr4_2:12392492-12392511 None:intergenic 30.0%
ATCGATGAGCTACTTAATAA+TGG + chr4_2:12392519-12392538 Msa0589460:CDS 30.0%
ATTGATGGAATTATTGATCC+AGG + chr4_2:12392609-12392628 Msa0589460:intron 30.0%
!! ATATGTGACCCTTTTTCATT+GGG + chr4_2:12392641-12392660 Msa0589460:CDS 30.0%
ATAATCATCTTGTAAGGCTT+GGG - chr4_2:12392673-12392692 None:intergenic 30.0%
!! AGCAATCTAAGAGTCTTATT+GGG + chr4_2:12393657-12393676 Msa0589460:intron 30.0%
!! ATTGTTAATGTGGCTTTATC+AGG + chr4_2:12393897-12393916 Msa0589460:intron 30.0%
TGATTTATGCCATCTTCATT+AGG - chr4_2:12393945-12393964 None:intergenic 30.0%
ATGACAGATGTGAATAAAGA+AGG + chr4_2:12394029-12394048 Msa0589460:intron 30.0%
TGACAGATGTGAATAAAGAA+GGG + chr4_2:12394030-12394049 Msa0589460:intron 30.0%
AATAAAGAAGGGACATACAT+TGG + chr4_2:12394041-12394060 Msa0589460:CDS 30.0%
ATGTAAAAGGATACTTTGCA+TGG + chr4_2:12394699-12394718 Msa0589460:CDS 30.0%
CAAAGCTCACACAATATTAT+TGG - chr4_2:12394893-12394912 None:intergenic 30.0%
! AGAAGAAGAAACTAGAGTTT+TGG - chr4_2:12395022-12395041 None:intergenic 30.0%
AAAGAGAAAAACGAGATACA+GGG - chr4_2:12395096-12395115 None:intergenic 30.0%
!!! CTGACAGTTTTGAGCTAAAT+CGG + chr4_2:12387100-12387119 Msa0589460:CDS 35.0%
!!! TTTCCGGAAGGTTTTGTTTT+TGG + chr4_2:12387129-12387148 Msa0589460:CDS 35.0%
GTACCAAAAACAAAACCTTC+CGG - chr4_2:12387135-12387154 None:intergenic 35.0%
!!! GAAGGTTTTGTTTTTGGTAC+TGG + chr4_2:12387135-12387154 Msa0589460:CDS 35.0%
TACAAAACGTACCTGGTAAT+TGG - chr4_2:12387166-12387185 None:intergenic 35.0%
ACAATGTTACAAAACGTACC+TGG - chr4_2:12387173-12387192 None:intergenic 35.0%
TGTGTATGTTACTATGCATG+TGG + chr4_2:12387190-12387209 Msa0589460:intron 35.0%
TTGGCCAATCTTATAGCATT+AGG - chr4_2:12387287-12387306 None:intergenic 35.0%
! CTATCCACTATCTAGGTTTT+TGG - chr4_2:12387646-12387665 None:intergenic 35.0%
!! CAAAAACCTAGATAGTGGAT+AGG + chr4_2:12387644-12387663 Msa0589460:intron 35.0%
! AGCTGTATATGGTGGTTTTT+AGG - chr4_2:12387699-12387718 None:intergenic 35.0%
TTCATGTAGCTTTCTCTATG+TGG - chr4_2:12387745-12387764 None:intergenic 35.0%
ACATGAACATATCTTGCCTT+AGG + chr4_2:12387758-12387777 Msa0589460:intron 35.0%
!!! GCCTTAGGAATTTTTTTTGG+TGG + chr4_2:12387773-12387792 Msa0589460:intron 35.0%
CATAATATATACAAGGTCCG+GGG - chr4_2:12387814-12387833 None:intergenic 35.0%
GCATAATATATACAAGGTCC+GGG - chr4_2:12387815-12387834 None:intergenic 35.0%
! GGAGTATTTAACCCACAAAT+CGG + chr4_2:12388838-12388857 Msa0589460:intron 35.0%
!!! CTTGTACTTTTTCCGATTTG+TGG - chr4_2:12388853-12388872 None:intergenic 35.0%
! CACAAATCGGAAAAAGTACA+AGG + chr4_2:12388851-12388870 Msa0589460:intron 35.0%
ACTTTGTCTTGACTCTTGTT+GGG - chr4_2:12388907-12388926 None:intergenic 35.0%
! GTCCTTGTTTGTCTTACAAA+TGG - chr4_2:12388944-12388963 None:intergenic 35.0%
!! TTCTTCTAAAATTTGGGAGC+GGG - chr4_2:12389030-12389049 None:intergenic 35.0%
AAATTTGGGAAGCTCAGAAT+GGG - chr4_2:12389061-12389080 None:intergenic 35.0%
AAAATTTGGGAAGCTCAGAA+TGG - chr4_2:12389062-12389081 None:intergenic 35.0%
! TGGAATGGGATGATTTTACT+CGG - chr4_2:12389181-12389200 None:intergenic 35.0%
CGCTCAAATTTATCTCGTAT+AGG - chr4_2:12389331-12389350 None:intergenic 35.0%
CGAGATAAATTTGAGCGAAT+AGG + chr4_2:12389334-12389353 Msa0589460:intron 35.0%
AAGGGAAGAACAATTGTTTG+GGG - chr4_2:12389570-12389589 None:intergenic 35.0%
GAAGGGAAGAACAATTGTTT+GGG - chr4_2:12389571-12389590 None:intergenic 35.0%
! AACAACAAGGTTAGCCAAAT+GGG - chr4_2:12389650-12389669 None:intergenic 35.0%
!!! AACCTTGTTGTTCTTTTGAG+TGG + chr4_2:12389658-12389677 Msa0589460:intron 35.0%
ATCCACTCAAAAGAACAACA+AGG - chr4_2:12389663-12389682 None:intergenic 35.0%
!! GCGAAGAAAAGTATTGGTAA+TGG - chr4_2:12389763-12389782 None:intergenic 35.0%
! GAGTTTGCGAAGAAAAGTAT+TGG - chr4_2:12389769-12389788 None:intergenic 35.0%
!!! AAACGTCCAAGATTGGTTTT+GGG - chr4_2:12389791-12389810 None:intergenic 35.0%
!!! AAAACGTCCAAGATTGGTTT+TGG - chr4_2:12389792-12389811 None:intergenic 35.0%
TTTGGTAGAAGGATTCATGT+GGG - chr4_2:12389831-12389850 None:intergenic 35.0%
ACATGAATCCTTCTACCAAA+GGG + chr4_2:12389831-12389850 Msa0589460:intron 35.0%
! TTTTCAAACATCCATCCCTT+TGG - chr4_2:12389849-12389868 None:intergenic 35.0%
! TAAGTGATCACAAGGTTTTG+TGG - chr4_2:12389948-12389967 None:intergenic 35.0%
GTGATTGTTAAGTGATCACA+AGG - chr4_2:12389956-12389975 None:intergenic 35.0%
TTTGTAAACCAAAGGATGAG+GGG - chr4_2:12390038-12390057 None:intergenic 35.0%
GGAGTCAATTTGTAAACCAA+AGG - chr4_2:12390046-12390065 None:intergenic 35.0%
TCAAGATGCCTAACAAAGTT+TGG - chr4_2:12390146-12390165 None:intergenic 35.0%
TAGGCATCTTGAGAAAAGAA+AGG + chr4_2:12390154-12390173 Msa0589460:intron 35.0%
!! GCTTTGGAAAAAAACTTGGT+GGG - chr4_2:12390257-12390276 None:intergenic 35.0%
!! TGCTTTGGAAAAAAACTTGG+TGG - chr4_2:12390258-12390277 None:intergenic 35.0%
AAGTCTTGATACATGGAAAC+CGG - chr4_2:12390288-12390307 None:intergenic 35.0%
ATCCCAAAAGTCTTGATACA+TGG - chr4_2:12390295-12390314 None:intergenic 35.0%
GTCAACCAAAGGTAAGTAAA+AGG + chr4_2:12390326-12390345 Msa0589460:intron 35.0%
GTTGAAGACTCCTATAATTC+CGG - chr4_2:12390387-12390406 None:intergenic 35.0%
! AGATGGTTCCATTTGATTTC+GGG - chr4_2:12390453-12390472 None:intergenic 35.0%
! ACCAGTAAATAGAGCATCAT+CGG + chr4_2:12390515-12390534 Msa0589460:intron 35.0%
AGGGGTTAAGGTTGAAAAAT+TGG - chr4_2:12390568-12390587 None:intergenic 35.0%
GATTTGGACTTTGTGACAAA+TGG - chr4_2:12390760-12390779 None:intergenic 35.0%
TTCTTGGAGTACATGATGTA+GGG - chr4_2:12390782-12390801 None:intergenic 35.0%
! TATGGTAAGTTGGAAGTTCT+TGG - chr4_2:12390798-12390817 None:intergenic 35.0%
AGGCATATGATATGGTAAGT+TGG - chr4_2:12390808-12390827 None:intergenic 35.0%
! AATCGGCTTTCCATAAAAGA+AGG - chr4_2:12390921-12390940 None:intergenic 35.0%
! TTCTTTTATGGAAAGCCGAT+TGG + chr4_2:12390920-12390939 Msa0589460:intron 35.0%
! CGAAAGTGTATATAAGCTAG+TGG - chr4_2:12391001-12391020 None:intergenic 35.0%
ACACTTTCGAGAAGAGAAAT+TGG + chr4_2:12391012-12391031 Msa0589460:intron 35.0%
TTTCGAGAAGAGAAATTGGT+CGG + chr4_2:12391016-12391035 Msa0589460:intron 35.0%
AAGTGGAATAAGGAGGTTTA+TGG + chr4_2:12391214-12391233 Msa0589460:intron 35.0%
AGTGGAATAAGGAGGTTTAT+GGG + chr4_2:12391215-12391234 Msa0589460:intron 35.0%
AGGGTTAATTGTGGAAATTG+CGG + chr4_2:12391258-12391277 Msa0589460:intron 35.0%
ATAAAGCCTTTCGGATAATG+AGG + chr4_2:12391303-12391322 Msa0589460:intron 35.0%
CACTACCTTTACTCTTCAAA+AGG - chr4_2:12391366-12391385 None:intergenic 35.0%
TCCAAAGAGCAAAAAGTAAG+TGG + chr4_2:12391392-12391411 Msa0589460:intron 35.0%
AGCAAAAAGTAAGTGGCTAA+AGG + chr4_2:12391399-12391418 Msa0589460:intron 35.0%
AAAAGTAAGTGGCTAAAGGA+AGG + chr4_2:12391403-12391422 Msa0589460:intron 35.0%
AAAGTAAGTGGCTAAAGGAA+GGG + chr4_2:12391404-12391423 Msa0589460:intron 35.0%
CCTATGATTAATGCAAAGCA+TGG - chr4_2:12391450-12391469 None:intergenic 35.0%
CCATGCTTTGCATTAATCAT+AGG + chr4_2:12391447-12391466 Msa0589460:intron 35.0%
CTCTCAAAATTGGTCATTCT+TGG + chr4_2:12391492-12391511 Msa0589460:intron 35.0%
CATGCCTAATTTGGATGAAT+TGG + chr4_2:12391589-12391608 Msa0589460:intron 35.0%
GGAGTTCCTTTCATTAAAAG+GGG + chr4_2:12391610-12391629 Msa0589460:intron 35.0%
! TTTGCTCCCCTTTTAATGAA+AGG - chr4_2:12391619-12391638 None:intergenic 35.0%
!! CATGAAGTGGACTTTTACAT+CGG + chr4_2:12392081-12392100 Msa0589460:intron 35.0%
CATACAGATTCTCCATATCT+TGG + chr4_2:12392333-12392352 Msa0589460:CDS 35.0%
CTATTACTTGGCAATATCCT+TGG - chr4_2:12392359-12392378 None:intergenic 35.0%
TATGCAGAAGGAAAACTAAG+TGG + chr4_2:12392456-12392475 Msa0589460:intron 35.0%
ATGCAGAAGGAAAACTAAGT+GGG + chr4_2:12392457-12392476 Msa0589460:intron 35.0%
TATTAAGTAGCTCATCGATC+AGG - chr4_2:12392518-12392537 None:intergenic 35.0%
CAATGAAAAAGGGTCACATA+TGG - chr4_2:12392642-12392661 None:intergenic 35.0%
!! CATATGTGACCCTTTTTCAT+TGG + chr4_2:12392640-12392659 Msa0589460:CDS 35.0%
TAATCATCTTGTAAGGCTTG+GGG - chr4_2:12392672-12392691 None:intergenic 35.0%
CATAATCATCTTGTAAGGCT+TGG - chr4_2:12392674-12392693 None:intergenic 35.0%
CAAGCCTTACAAGATGATTA+TGG + chr4_2:12392672-12392691 Msa0589460:CDS 35.0%
CTAGTTAGTTAGTTGGTTAG+TGG - chr4_2:12392985-12393004 None:intergenic 35.0%
! AACTATGTTTGTTGGTTGGT+TGG - chr4_2:12393027-12393046 None:intergenic 35.0%
AACCAACCAACAAACATAGT+TGG + chr4_2:12393026-12393045 Msa0589460:intron 35.0%
! ATCCAACTATGTTTGTTGGT+TGG - chr4_2:12393031-12393050 None:intergenic 35.0%
GATATTTGCTTCCTGGAATT+TGG + chr4_2:12393208-12393227 Msa0589460:CDS 35.0%
TTACTTTGTCTCCAAATTCC+AGG - chr4_2:12393222-12393241 None:intergenic 35.0%
TTGGAGACAAAGTAAAGCAT+TGG + chr4_2:12393227-12393246 Msa0589460:CDS 35.0%
! TGGAGACAAAGTAAAGCATT+GGG + chr4_2:12393228-12393247 Msa0589460:CDS 35.0%
GTACTCAAAGTGTAAGAGAA+TGG - chr4_2:12393268-12393287 None:intergenic 35.0%
ACACTTTGAGTACATCAGAT+TGG + chr4_2:12393275-12393294 Msa0589460:CDS 35.0%
ACGAAATATCAGGGTCAAAA+TGG + chr4_2:12393355-12393374 Msa0589460:CDS 35.0%
CAAAATGGTGTAATAGGCAT+TGG + chr4_2:12393370-12393389 Msa0589460:CDS 35.0%
CCATCCAAACATGAAATCAA+GGG - chr4_2:12393461-12393480 None:intergenic 35.0%
ACCATCCAAACATGAAATCA+AGG - chr4_2:12393462-12393481 None:intergenic 35.0%
ATCCATGGTTGTTGTAGAAA+CGG - chr4_2:12393503-12393522 None:intergenic 35.0%
TTTATACAACCACTGACAAC+AGG + chr4_2:12393575-12393594 Msa0589460:CDS 35.0%
! GAGCAATCTAAGAGTCTTAT+TGG + chr4_2:12393656-12393675 Msa0589460:intron 35.0%
TGGCTATATGTTTGTCCAAA+AGG + chr4_2:12394150-12394169 Msa0589460:CDS 35.0%
GGCTATATGTTTGTCCAAAA+GGG + chr4_2:12394151-12394170 Msa0589460:CDS 35.0%
TTTCCTTTGTGTACAACAGT+AGG - chr4_2:12394185-12394204 None:intergenic 35.0%
CCATTCAAAGTTGTCCAAAA+GGG - chr4_2:12394726-12394745 None:intergenic 35.0%
TCCATTCAAAGTTGTCCAAA+AGG - chr4_2:12394727-12394746 None:intergenic 35.0%
GACAACTTTGAATGGAATGA+CGG + chr4_2:12394731-12394750 Msa0589460:CDS 35.0%
AAGAAACTTCCTAAACCATC+GGG - chr4_2:12394828-12394847 None:intergenic 35.0%
CAAGAAACTTCCTAAACCAT+CGG - chr4_2:12394829-12394848 None:intergenic 35.0%
!! AGAAACTAGAGTTTTGGTGA+CGG - chr4_2:12395016-12395035 None:intergenic 35.0%
TTCTTCTTCGCCAATAAAGA+GGG + chr4_2:12395035-12395054 Msa0589460:intron 35.0%
TTAAATCACCCCCTCTTTAT+TGG - chr4_2:12395048-12395067 None:intergenic 35.0%
AATAAAGAGGGGGTGATTTA+AGG + chr4_2:12395047-12395066 Msa0589460:intron 35.0%
AAGAGAAAAACGAGATACAG+GGG - chr4_2:12395095-12395114 None:intergenic 35.0%
GAAAGAGAAAAACGAGATAC+AGG - chr4_2:12395097-12395116 None:intergenic 35.0%
! GTCATTGATTGAATCTGCAT+TGG - chr4_2:12395284-12395303 None:intergenic 35.0%
AAAACGTACCTGGTAATTGG+AGG - chr4_2:12387163-12387182 None:intergenic 40.0%
GATATATTTGCCCATACACC+AGG + chr4_2:12387571-12387590 Msa0589460:intron 40.0%
CTAGCCAAAAACCTAGATAG+TGG + chr4_2:12387639-12387658 Msa0589460:intron 40.0%
TTGTAGCCTATCCACTATCT+AGG - chr4_2:12387653-12387672 None:intergenic 40.0%
!! TATATGGTGGTTTTTAGGCG+TGG - chr4_2:12387694-12387713 None:intergenic 40.0%
!!! GAATTTTTTTTGGTGGTGGC+CGG + chr4_2:12387780-12387799 Msa0589460:intron 40.0%
! TGAGTTTAGCTCAGTTGGTA+TGG - chr4_2:12387843-12387862 None:intergenic 40.0%
ACAACCATGTGAGTTTAGCT+CGG - chr4_2:12387895-12387914 None:intergenic 40.0%
CTAAACTCACATGGTTGTAG+TGG + chr4_2:12387897-12387916 Msa0589460:intron 40.0%
ATGGTTGTAGTGGTGTGATT+TGG + chr4_2:12387907-12387926 Msa0589460:intron 40.0%
! TTGTAGTGGTGTGATTTGGA+CGG + chr4_2:12387911-12387930 Msa0589460:intron 40.0%
AGGGTATGAGTAGCTGAATA+GGG - chr4_2:12388011-12388030 None:intergenic 40.0%
GACTTTGTCTTGACTCTTGT+TGG - chr4_2:12388908-12388927 None:intergenic 40.0%
AAGAGTCAAGACAAAGTCGA+GGG + chr4_2:12388910-12388929 Msa0589460:intron 40.0%
AGCAATAAACCATCTCCAAG+AGG + chr4_2:12388977-12388996 Msa0589460:intron 40.0%
AAGTCATCAATGTCTCCTCT+TGG - chr4_2:12388995-12389014 None:intergenic 40.0%
AATTTGGGAAGCTCAGAATG+GGG - chr4_2:12389060-12389079 None:intergenic 40.0%
TCATTTGGCATGCAACAGTT+TGG - chr4_2:12389085-12389104 None:intergenic 40.0%
!! GTAGCTTTGTTGGAAGGATT+TGG - chr4_2:12389224-12389243 None:intergenic 40.0%
!! GTAGATGTAGCTTTGTTGGA+AGG - chr4_2:12389230-12389249 None:intergenic 40.0%
TTCACCATGAAGACGTTTGT+AGG + chr4_2:12389476-12389495 Msa0589460:intron 40.0%
TGAACCTACAAACGTCTTCA+TGG - chr4_2:12389483-12389502 None:intergenic 40.0%
TGAAGACGTTTGTAGGTTCA+AGG + chr4_2:12389483-12389502 Msa0589460:intron 40.0%
GGAAGGGAAGAACAATTGTT+TGG - chr4_2:12389572-12389591 None:intergenic 40.0%
!! GAGAAGGGATCTTTTTGGAA+GGG - chr4_2:12389588-12389607 None:intergenic 40.0%
! GAACAACAAGGTTAGCCAAA+TGG - chr4_2:12389651-12389670 None:intergenic 40.0%
TGGGCATGATATTTGGATAG+CGG - chr4_2:12389726-12389745 None:intergenic 40.0%
ACGTCTTTGGGCATGATATT+TGG - chr4_2:12389733-12389752 None:intergenic 40.0%
CAAACTCCCAAAACCAATCT+TGG + chr4_2:12389782-12389801 Msa0589460:intron 40.0%
!! ATTCATGTGGGTTAGGAAAG+AGG - chr4_2:12389819-12389838 None:intergenic 40.0%
TAGAAGGATTCATGTGGGTT+AGG - chr4_2:12389826-12389845 None:intergenic 40.0%
CTTTGGTAGAAGGATTCATG+TGG - chr4_2:12389832-12389851 None:intergenic 40.0%
CACATGAATCCTTCTACCAA+AGG + chr4_2:12389830-12389849 Msa0589460:intron 40.0%
ATATAGCTCCTCTTGCAAAG+TGG - chr4_2:12389984-12390003 None:intergenic 40.0%
TTGTAAACCAAAGGATGAGG+GGG - chr4_2:12390037-12390056 None:intergenic 40.0%
AAGAATACTTGGGTGAGTTG+GGG - chr4_2:12390067-12390086 None:intergenic 40.0%
GAAGAATACTTGGGTGAGTT+GGG - chr4_2:12390068-12390087 None:intergenic 40.0%
AGAAGAATACTTGGGTGAGT+TGG - chr4_2:12390069-12390088 None:intergenic 40.0%
! TTGGAAAAAAACTTGGTGGG+TGG - chr4_2:12390254-12390273 None:intergenic 40.0%
GAAACCGGTAATACATGCTT+TGG - chr4_2:12390273-12390292 None:intergenic 40.0%
! CTCTCCCTTTTACTTACCTT+TGG - chr4_2:12390334-12390353 None:intergenic 40.0%
CACTTAAGAAAAGTGGATGC+CGG + chr4_2:12390365-12390384 Msa0589460:intron 40.0%
AAAGTGGATGCCGGAATTAT+AGG + chr4_2:12390374-12390393 Msa0589460:intron 40.0%
! CTTTTCGACCCGAAATCAAA+TGG + chr4_2:12390442-12390461 Msa0589460:intron 40.0%
GTATGAAGGCTATCCTTAGA+TGG - chr4_2:12390470-12390489 None:intergenic 40.0%
TGATGCTCTATTTACTGGTG+AGG - chr4_2:12390514-12390533 None:intergenic 40.0%
GAGTACATGATGTAGGGATT+TGG - chr4_2:12390776-12390795 None:intergenic 40.0%
GTTCTTGGAGTACATGATGT+AGG - chr4_2:12390783-12390802 None:intergenic 40.0%
! TTATGGAAAGCCGATTGGTT+AGG + chr4_2:12390925-12390944 Msa0589460:intron 40.0%
! TATAATGGAATCCATCACCG+CGG + chr4_2:12390951-12390970 Msa0589460:intron 40.0%
! TAATCGGGTTGCAAGAACTT+TGG + chr4_2:12390975-12390994 Msa0589460:intron 40.0%
AAGAAGAGAAACCTCTTGGA+AGG + chr4_2:12391090-12391109 Msa0589460:intron 40.0%
!! TTGGAAGGCACTCATTATGA+TGG + chr4_2:12391105-12391124 Msa0589460:intron 40.0%
!! GATAAGGGGTATTCTGAAGT+CGG - chr4_2:12391156-12391175 None:intergenic 40.0%
GTGGAATAAGGAGGTTTATG+GGG + chr4_2:12391216-12391235 Msa0589460:intron 40.0%
AGGTGGAGGAGAAAATCAAA+GGG + chr4_2:12391239-12391258 Msa0589460:intron 40.0%
AATTGTGGAAATTGCGGATG+TGG + chr4_2:12391264-12391283 Msa0589460:intron 40.0%
!!! GCCACTTACTTTTTGCTCTT+TGG - chr4_2:12391396-12391415 None:intergenic 40.0%
AAGTAAGTGGCTAAAGGAAG+GGG + chr4_2:12391405-12391424 Msa0589460:intron 40.0%
AAAGGAAGGGGATTCAAACT+CGG + chr4_2:12391417-12391436 Msa0589460:intron 40.0%
GAAGTGATTAGAAGCTCCAA+AGG + chr4_2:12391680-12391699 Msa0589460:intron 40.0%
CAATATCCTTGGCCAAGATA+TGG - chr4_2:12392348-12392367 None:intergenic 40.0%
TGCAGAAGGAAAACTAAGTG+GGG + chr4_2:12392458-12392477 Msa0589460:intron 40.0%
GTCACATATGGTATTTGACC+TGG - chr4_2:12392630-12392649 None:intergenic 40.0%
GGGAAGATCCCAATGAAAAA+GGG - chr4_2:12392652-12392671 None:intergenic 40.0%
GCCTTACAAGATGATTATGG+AGG + chr4_2:12392675-12392694 Msa0589460:CDS 40.0%
GCCTCCATAATCATCTTGTA+AGG - chr4_2:12392679-12392698 None:intergenic 40.0%
GCTTTGTCAGCGAGAATATT+AGG + chr4_2:12392697-12392716 Msa0589460:CDS 40.0%
!! ATCTCTAAAGTGTGAGTGTG+TGG - chr4_2:12392830-12392849 None:intergenic 40.0%
! ATGTTTGTTGGTTGGTTGGT+TGG - chr4_2:12393023-12393042 None:intergenic 40.0%
CTTTGTGGATATTTGCTTCC+TGG + chr4_2:12393201-12393220 Msa0589460:CDS 40.0%
CAGGGTCAAAATGGTGTAAT+AGG + chr4_2:12393364-12393383 Msa0589460:CDS 40.0%
GCATTGGATTAAACTCTCAC+TGG + chr4_2:12393386-12393405 Msa0589460:CDS 40.0%
! TCTAATGGGTCAGTTGAGTA+TGG - chr4_2:12393418-12393437 None:intergenic 40.0%
! GGACGGCTTTTTGATCTAAT+GGG - chr4_2:12393432-12393451 None:intergenic 40.0%
! TGGACGGCTTTTTGATCTAA+TGG - chr4_2:12393433-12393452 None:intergenic 40.0%
CCCTTGATTTCATGTTTGGA+TGG + chr4_2:12393458-12393477 Msa0589460:CDS 40.0%
! CACAATTTTGTCACGATCCA+TGG - chr4_2:12393518-12393537 None:intergenic 40.0%
GATTGCTCTTGAGTGAACTT+TGG - chr4_2:12393644-12393663 None:intergenic 40.0%
! AGGAATTGGTTTCGTTGCAT+TGG - chr4_2:12393729-12393748 None:intergenic 40.0%
AATTCCTCTACATTCTGCAG+CGG + chr4_2:12393742-12393761 Msa0589460:intron 40.0%
GAAAACACTATTAACGCCGT+CGG - chr4_2:12393874-12393893 None:intergenic 40.0%
TTCATTAGGAGTGGTGAGAA+AGG - chr4_2:12393931-12393950 None:intergenic 40.0%
TATGCCATCTTCATTAGGAG+TGG - chr4_2:12393940-12393959 None:intergenic 40.0%
TGTTTGTCCAAAAGGGATTC+AGG + chr4_2:12394158-12394177 Msa0589460:CDS 40.0%
!!! TGGTTTTTTGTGTGAAGGCA+AGG + chr4_2:12394671-12394690 Msa0589460:intron 40.0%
AGGCAAGGTGTGAATGTAAA+AGG + chr4_2:12394686-12394705 Msa0589460:intron 40.0%
! ATACTTTGCATGGTCCCTTT+TGG + chr4_2:12394709-12394728 Msa0589460:CDS 40.0%
! CCCTTTTGGACAACTTTGAA+TGG + chr4_2:12394723-12394742 Msa0589460:CDS 40.0%
CTTCTTCTTCGCCAATAAAG+AGG + chr4_2:12395034-12395053 Msa0589460:intron 40.0%
TCTTCTTCGCCAATAAAGAG+GGG + chr4_2:12395036-12395055 Msa0589460:intron 40.0%
AGAGAAAAACGAGATACAGG+GGG - chr4_2:12395094-12395113 None:intergenic 40.0%
!! GTGTGTTTGTTGTCTTTGTG+TGG + chr4_2:12395193-12395212 Msa0589460:intron 40.0%
! GCTAAATCGGAGCAGTTTTC+CGG + chr4_2:12387113-12387132 Msa0589460:CDS 45.0%
!! GAAGGTGCTGTACATGAAGA+CGG + chr4_2:12387529-12387548 Msa0589460:intron 45.0%
! AGGCGTGGTCATGATTTGTA+AGG - chr4_2:12387679-12387698 None:intergenic 45.0%
TAAACTCACGAGGACGTCTT+TGG + chr4_2:12387855-12387874 Msa0589460:intron 45.0%
! GAGGGTATGAGTAGCTGAAT+AGG - chr4_2:12388012-12388031 None:intergenic 45.0%
AACTCTAATGCCACTCCATG+TGG + chr4_2:12388357-12388376 Msa0589460:intron 45.0%
GTTGTAACTGCATACAGGGA+AGG + chr4_2:12388420-12388439 Msa0589460:intron 45.0%
ACTGCATACAGGGAAGGTAA+AGG + chr4_2:12388426-12388445 Msa0589460:intron 45.0%
CATACAGGGAAGGTAAAGGA+TGG + chr4_2:12388430-12388449 Msa0589460:intron 45.0%
GGGATACTCACCCTTAAGAA+AGG + chr4_2:12388872-12388891 Msa0589460:intron 45.0%
CAAGAGTCAAGACAAAGTCG+AGG + chr4_2:12388909-12388928 Msa0589460:intron 45.0%
TCAATGTCTCCTCTTGGAGA+TGG - chr4_2:12388989-12389008 None:intergenic 45.0%
!! TTCTAAAATTTGGGAGCGGG+AGG - chr4_2:12389027-12389046 None:intergenic 45.0%
ATCTCGTATAGGAGCTTTGC+CGG - chr4_2:12389320-12389339 None:intergenic 45.0%
!! AAGGGGAATCTGGACTAGTT+TGG - chr4_2:12389410-12389429 None:intergenic 45.0%
! GGAGAAGGGATCTTTTTGGA+AGG - chr4_2:12389589-12389608 None:intergenic 45.0%
! GAGTGGAGAAGGGATCTTTT+TGG - chr4_2:12389593-12389612 None:intergenic 45.0%
TTGGGACTTTGAGTGGAGAA+GGG - chr4_2:12389603-12389622 None:intergenic 45.0%
!! GTCTATGGGTTGATGAAGAG+TGG - chr4_2:12389628-12389647 None:intergenic 45.0%
CATCAACCCATAGACCCATT+TGG + chr4_2:12389633-12389652 Msa0589460:intron 45.0%
! GGTTAGCCAAATGGGTCTAT+GGG - chr4_2:12389642-12389661 None:intergenic 45.0%
! AGGTTAGCCAAATGGGTCTA+TGG - chr4_2:12389643-12389662 None:intergenic 45.0%
GGGCATGATATTTGGATAGC+GGG - chr4_2:12389725-12389744 None:intergenic 45.0%
AATGGGGAAGCAACGTCTTT+GGG - chr4_2:12389745-12389764 None:intergenic 45.0%
TAATGGGGAAGCAACGTCTT+TGG - chr4_2:12389746-12389765 None:intergenic 45.0%
GGTTGGAAAACGTCCAAGAT+TGG - chr4_2:12389798-12389817 None:intergenic 45.0%
!! ATGTGGGTTAGGAAAGAGGT+TGG - chr4_2:12389815-12389834 None:intergenic 45.0%
GAATCCTTCTACCAAAGGGA+TGG + chr4_2:12389835-12389854 Msa0589460:intron 45.0%
ACATCCATCCCTTTGGTAGA+AGG - chr4_2:12389842-12389861 None:intergenic 45.0%
CACCATTTCCACTTTGCAAG+AGG + chr4_2:12389973-12389992 Msa0589460:intron 45.0%
CTCCTCTTGCAAAGTGGAAA+TGG - chr4_2:12389978-12389997 None:intergenic 45.0%
TGTAAACCAAAGGATGAGGG+GGG - chr4_2:12390036-12390055 None:intergenic 45.0%
!! ATCGGTTTGTGAGTCTTGGT+GGG - chr4_2:12390227-12390246 None:intergenic 45.0%
!! AATCGGTTTGTGAGTCTTGG+TGG - chr4_2:12390228-12390247 None:intergenic 45.0%
!! AGGAATCGGTTTGTGAGTCT+TGG - chr4_2:12390231-12390250 None:intergenic 45.0%
! GAAAAAAACTTGGTGGGTGG+AGG - chr4_2:12390251-12390270 None:intergenic 45.0%
TTTCTCCAACCGTCAACCAA+AGG + chr4_2:12390315-12390334 Msa0589460:intron 45.0%
ACTTACCTTTGGTTGACGGT+TGG - chr4_2:12390323-12390342 None:intergenic 45.0%
GCCGATGATGCTCTATTTAC+TGG - chr4_2:12390519-12390538 None:intergenic 45.0%
GCTTAAACAAGGAGACCTCT+TGG - chr4_2:12390648-12390667 None:intergenic 45.0%
AAAAGAAGGCTCCTTGTGGA+TGG - chr4_2:12390907-12390926 None:intergenic 45.0%
CCATAAAAGAAGGCTCCTTG+TGG - chr4_2:12390911-12390930 None:intergenic 45.0%
! CCACAAGGAGCCTTCTTTTA+TGG + chr4_2:12390908-12390927 Msa0589460:intron 45.0%
! CTTCGATGCTCACTCTCTTT+TGG - chr4_2:12391046-12391065 None:intergenic 45.0%
CATAATGAGTGCCTTCCAAG+AGG - chr4_2:12391104-12391123 None:intergenic 45.0%
GAATAAGGAGGTTTATGGGG+AGG + chr4_2:12391219-12391238 Msa0589460:intron 45.0%
GAGGTGGAGGAGAAAATCAA+AGG + chr4_2:12391238-12391257 Msa0589460:intron 45.0%
CCTCTACCTCATTATCCGAA+AGG - chr4_2:12391312-12391331 None:intergenic 45.0%
CCTTTCGGATAATGAGGTAG+AGG + chr4_2:12391309-12391328 Msa0589460:intron 45.0%
CGGATAATGAGGTAGAGGTT+TGG + chr4_2:12391314-12391333 Msa0589460:intron 45.0%
CTTCAAAAGGCCCCAAAGAT+TGG - chr4_2:12391353-12391372 None:intergenic 45.0%
!! TGGGGCCTTTTGAAGAGTAA+AGG + chr4_2:12391358-12391377 Msa0589460:intron 45.0%
GTCTTAAAGCAGACGGATGA+TGG - chr4_2:12391520-12391539 None:intergenic 45.0%
!! TCCGTCTGCTTTAAGACATG+CGG + chr4_2:12391523-12391542 Msa0589460:intron 45.0%
ACCGCATGTCTTAAAGCAGA+CGG - chr4_2:12391527-12391546 None:intergenic 45.0%
TCACTGGGACATGCCTAATT+TGG + chr4_2:12391580-12391599 Msa0589460:intron 45.0%
AGGGGAGCAAAATGAGTCTT+TGG + chr4_2:12391628-12391647 Msa0589460:intron 45.0%
CTCCAAAGGCAACAAAAGTC+CGG + chr4_2:12391694-12391713 Msa0589460:intron 45.0%
TCCAAAGGCAACAAAAGTCC+GGG + chr4_2:12391695-12391714 Msa0589460:intron 45.0%
AAGCTAAATCCAACCTGTCC+CGG - chr4_2:12391716-12391735 None:intergenic 45.0%
GATTCTCCATATCTTGGCCA+AGG + chr4_2:12392339-12392358 Msa0589460:CDS 45.0%
GCAGAAGGAAAACTAAGTGG+GGG + chr4_2:12392459-12392478 Msa0589460:intron 45.0%
GGGGAAGATCCCAATGAAAA+AGG - chr4_2:12392653-12392672 None:intergenic 45.0%
! GAAGTTGGTTGTGTGTTGAC+TGG - chr4_2:12393303-12393322 None:intergenic 45.0%
CATCTGCATGAGCAAGAAGT+TGG - chr4_2:12393318-12393337 None:intergenic 45.0%
!! ACATGAAATCAAGGGCGTCT+TGG - chr4_2:12393453-12393472 None:intergenic 45.0%
GACGCCCTTGATTTCATGTT+TGG + chr4_2:12393454-12393473 Msa0589460:CDS 45.0%
GACCGTTTCTACAACAACCA+TGG + chr4_2:12393498-12393517 Msa0589460:intron 45.0%
ACATAAGACACCATGCTTGC+TGG - chr4_2:12393608-12393627 None:intergenic 45.0%
AGCAAGCATGGTGTCTTATG+TGG + chr4_2:12393607-12393626 Msa0589460:CDS 45.0%
GCAAGCATGGTGTCTTATGT+GGG + chr4_2:12393608-12393627 Msa0589460:CDS 45.0%
GCTGCAGAATGTAGAGGAAT+TGG - chr4_2:12393743-12393762 None:intergenic 45.0%
ATTCCTCTACATTCTGCAGC+GGG + chr4_2:12393743-12393762 Msa0589460:intron 45.0%
CTCACCACTCCTAATGAAGA+TGG + chr4_2:12393933-12393952 Msa0589460:intron 45.0%
AAGGGACATACATTGGACCA+TGG + chr4_2:12394048-12394067 Msa0589460:CDS 45.0%
AGGGACATACATTGGACCAT+GGG + chr4_2:12394049-12394068 Msa0589460:CDS 45.0%
AAGAGAGTCTTACTCACCCA+TGG - chr4_2:12394068-12394087 None:intergenic 45.0%
ATGGGTGAGTAAGACTCTCT+TGG + chr4_2:12394067-12394086 Msa0589460:intron 45.0%
AATATGTGCAGGCTGCAACT+TGG + chr4_2:12394130-12394149 Msa0589460:intron 45.0%
! AGTAGGTCCTGAATCCCTTT+TGG - chr4_2:12394168-12394187 None:intergenic 45.0%
GGACCTACTGTTGTACACAA+AGG + chr4_2:12394179-12394198 Msa0589460:CDS 45.0%
TCCAACACTATCACTCGAAG+AGG + chr4_2:12394482-12394501 Msa0589460:CDS 45.0%
CTTCTTCGCCAATAAAGAGG+GGG + chr4_2:12395037-12395056 Msa0589460:intron 45.0%
! TTGCCTTTCTTGTTTCGCTC+AGG + chr4_2:12395222-12395241 Msa0589460:intron 45.0%
AGACCTGAGCGAAACAAGAA+AGG - chr4_2:12395228-12395247 None:intergenic 45.0%
!! AAATAAAATTTCAATTTATA+CGG - chr4_2:12393542-12393561 None:intergenic 5.0%
! AATCGGAGCAGTTTTCCGGA+AGG + chr4_2:12387117-12387136 Msa0589460:CDS 50.0%
!! TACTGGCTCCTCCAATTACC+AGG + chr4_2:12387152-12387171 Msa0589460:CDS 50.0%
GCTGTACATGAAGACGGAAG+AGG + chr4_2:12387535-12387554 Msa0589460:intron 50.0%
CATGAAGACGGAAGAGGACT+TGG + chr4_2:12387541-12387560 Msa0589460:intron 50.0%
! ACGGAAGAGGACTTGGTACA+TGG + chr4_2:12387548-12387567 Msa0589460:intron 50.0%
! CGGAAGAGGACTTGGTACAT+GGG + chr4_2:12387549-12387568 Msa0589460:intron 50.0%
! CCTCGTGAGTTTAGCTCAGT+TGG - chr4_2:12387848-12387867 None:intergenic 50.0%
CCAACTGAGCTAAACTCACG+AGG + chr4_2:12387845-12387864 Msa0589460:intron 50.0%
CTAGCCGAGCTAAACTCACA+TGG + chr4_2:12387888-12387907 Msa0589460:intron 50.0%
ATGCCACTCCATGTGGCTAA+TGG + chr4_2:12388364-12388383 Msa0589460:intron 50.0%
TGCCACTCCATGTGGCTAAT+GGG + chr4_2:12388365-12388384 Msa0589460:intron 50.0%
GATTCCACCCATTAGCCACA+TGG - chr4_2:12388375-12388394 None:intergenic 50.0%
TTCGGATTGTGTGTGGTGCT+CGG - chr4_2:12389287-12389306 None:intergenic 50.0%
GTGTGACTTCGGATTGTGTG+TGG - chr4_2:12389294-12389313 None:intergenic 50.0%
CAATCCGAAGTCACACCAAC+CGG + chr4_2:12389298-12389317 Msa0589460:intron 50.0%
! TTTGCCGGTTGGTGTGACTT+CGG - chr4_2:12389305-12389324 None:intergenic 50.0%
TGCACTAGAAGAGGGCTAAG+GGG - chr4_2:12389427-12389446 None:intergenic 50.0%
CTGCACTAGAAGAGGGCTAA+GGG - chr4_2:12389428-12389447 None:intergenic 50.0%
GGTAGTGCTGCACTAGAAGA+GGG - chr4_2:12389435-12389454 None:intergenic 50.0%
! TGGTAGTGCTGCACTAGAAG+AGG - chr4_2:12389436-12389455 None:intergenic 50.0%
GTTGGGACTTTGAGTGGAGA+AGG - chr4_2:12389604-12389623 None:intergenic 50.0%
!! GGTTGATGAAGAGTGGCGTT+GGG - chr4_2:12389621-12389640 None:intergenic 50.0%
GTTTGTGAGTCTTGGTGGGA+GGG - chr4_2:12390223-12390242 None:intergenic 50.0%
! AACTTGGTGGGTGGAGGAAT+CGG - chr4_2:12390245-12390264 None:intergenic 50.0%
!! AGGGGCATTGATGAAGGAAG+TGG - chr4_2:12390610-12390629 None:intergenic 50.0%
AACAAGGAGACCTCTTGGTG+TGG - chr4_2:12390643-12390662 None:intergenic 50.0%
! GTTGCTGGTTAATGAGGTGG+TGG - chr4_2:12390881-12390900 None:intergenic 50.0%
! CGTGTTGCTGGTTAATGAGG+TGG - chr4_2:12390884-12390903 None:intergenic 50.0%
! TGGCGTGTTGCTGGTTAATG+AGG - chr4_2:12390887-12390906 None:intergenic 50.0%
AATCCATCACCGCGGCTAAT+CGG + chr4_2:12390959-12390978 Msa0589460:intron 50.0%
TAAGGAGGTTTATGGGGAGG+TGG + chr4_2:12391222-12391241 Msa0589460:intron 50.0%
! TCCCGGACTTTTGTTGCCTT+TGG - chr4_2:12391699-12391718 None:intergenic 50.0%
AACAAAAGTCCGGGACAGGT+TGG + chr4_2:12391704-12391723 Msa0589460:intron 50.0%
!! AGTGGGGGTATTAACCCAGA+CGG + chr4_2:12392474-12392493 Msa0589460:CDS 50.0%
!! GAAATCAAGGGCGTCTTGGA+CGG - chr4_2:12393449-12393468 None:intergenic 50.0%
GGATACTCTCCTGTTGTCAG+TGG - chr4_2:12393587-12393606 None:intergenic 50.0%
!! AGGAGAGTATCCAGCAAGCA+TGG + chr4_2:12393595-12393614 Msa0589460:CDS 50.0%
! TGCATTGGCAGCATACATGC+TGG - chr4_2:12393714-12393733 None:intergenic 50.0%
! GCCTCTTCGAGTGATAGTGT+TGG - chr4_2:12394486-12394505 None:intergenic 50.0%
! GACGGATACACTGTGCGTTT+TGG + chr4_2:12394749-12394768 Msa0589460:CDS 50.0%
! CGAGATACAGGGGGTGATTT+TGG - chr4_2:12395085-12395104 None:intergenic 50.0%
ATGTCTCGAGATCTGCAACG+TGG - chr4_2:12395318-12395337 None:intergenic 50.0%
ACGTTGCAGATCTCGAGACA+TGG + chr4_2:12395317-12395336 Msa0589460:intron 50.0%
CGTTGCAGATCTCGAGACAT+GGG + chr4_2:12395318-12395337 Msa0589460:intron 50.0%
AAGGTCCGGGGTTCTTACTC+CGG - chr4_2:12387802-12387821 None:intergenic 55.0%
! GTGTGATTTGGACGGTGTCG+TGG + chr4_2:12387919-12387938 Msa0589460:intron 55.0%
!! TGATTTGGACGGTGTCGTGG+TGG + chr4_2:12387922-12387941 Msa0589460:intron 55.0%
CACCCATTAGCCACATGGAG+TGG - chr4_2:12388370-12388389 None:intergenic 55.0%
CACTCCATGTGGCTAATGGG+TGG + chr4_2:12388368-12388387 Msa0589460:intron 55.0%
!! CTCGGGTTTTCAAGAGGTGG+AGG - chr4_2:12389269-12389288 None:intergenic 55.0%
!! GTGCTCGGGTTTTCAAGAGG+TGG - chr4_2:12389272-12389291 None:intergenic 55.0%
!! GTGGTGCTCGGGTTTTCAAG+AGG - chr4_2:12389275-12389294 None:intergenic 55.0%
TCGGATTGTGTGTGGTGCTC+GGG - chr4_2:12389286-12389305 None:intergenic 55.0%
CGTATAGGAGCTTTGCCGGT+TGG - chr4_2:12389316-12389335 None:intergenic 55.0%
GAAGAGGGCTAAGGGGAATC+TGG - chr4_2:12389420-12389439 None:intergenic 55.0%
GCTGCACTAGAAGAGGGCTA+AGG - chr4_2:12389429-12389448 None:intergenic 55.0%
! AGTGGCGTTGGGACTTTGAG+TGG - chr4_2:12389610-12389629 None:intergenic 55.0%
!! GGGTTGATGAAGAGTGGCGT+TGG - chr4_2:12389622-12389641 None:intergenic 55.0%
CCAAAGGATGAGGGGGGATT+AGG - chr4_2:12390030-12390049 None:intergenic 55.0%
CCTAATCCCCCCTCATCCTT+TGG + chr4_2:12390027-12390046 Msa0589460:intron 55.0%
GGTTTGTGAGTCTTGGTGGG+AGG - chr4_2:12390224-12390243 None:intergenic 55.0%
!! GGGGTTAGGGGCATTGATGA+AGG - chr4_2:12390616-12390635 None:intergenic 55.0%
TTGGTGTGGCGAAGGGGTTA+GGG - chr4_2:12390629-12390648 None:intergenic 55.0%
! AGACCTCTTGGTGTGGCGAA+GGG - chr4_2:12390636-12390655 None:intergenic 55.0%
!! AGGTGGTGGACTTCGCTAAG+AGG - chr4_2:12390867-12390886 None:intergenic 55.0%
ATCCATCACCGCGGCTAATC+GGG + chr4_2:12390960-12390979 Msa0589460:intron 55.0%
! TCTTGCAACCCGATTAGCCG+CGG - chr4_2:12390971-12390990 None:intergenic 55.0%
AGGCAACAAAAGTCCGGGAC+AGG + chr4_2:12391700-12391719 Msa0589460:intron 55.0%
!! ATCACTCGAAGAGGCGCTCA+TGG + chr4_2:12394491-12394510 Msa0589460:CDS 55.0%
ACCATCGGGCAGAGAGCTTA+GGG - chr4_2:12394814-12394833 None:intergenic 55.0%
AACCATCGGGCAGAGAGCTT+AGG - chr4_2:12394815-12394834 None:intergenic 55.0%
AGCTCTCTGCCCGATGGTTT+AGG + chr4_2:12394816-12394835 Msa0589460:CDS 55.0%
TCTCGAGATCTGCAACGTGG+AGG - chr4_2:12395315-12395334 None:intergenic 55.0%
!! CGGTGTCGTGGTGGAAACTC+TGG + chr4_2:12387931-12387950 Msa0589460:intron 60.0%
TGGTGTGGCGAAGGGGTTAG+GGG - chr4_2:12390628-12390647 None:intergenic 60.0%
! CTTGGTGTGGCGAAGGGGTT+AGG - chr4_2:12390630-12390649 None:intergenic 60.0%
AACCCCTTCGCCACACCAAG+AGG + chr4_2:12390630-12390649 Msa0589460:intron 60.0%
! GACCTCTTGGTGTGGCGAAG+GGG - chr4_2:12390635-12390654 None:intergenic 60.0%
! GAGACCTCTTGGTGTGGCGA+AGG - chr4_2:12390637-12390656 None:intergenic 60.0%
CGGCTGCTCAGCAGATCAAG+TGG - chr4_2:12390684-12390703 None:intergenic 60.0%
CCTTGTGGATGGCGTGTTGC+TGG - chr4_2:12390896-12390915 None:intergenic 60.0%
CCAGCAACACGCCATCCACA+AGG + chr4_2:12390893-12390912 Msa0589460:intron 60.0%
! AACCCGATTAGCCGCGGTGA+TGG - chr4_2:12390965-12390984 None:intergenic 60.0%
GGAGGTTTATGGGGAGGTGG+AGG + chr4_2:12391225-12391244 Msa0589460:intron 60.0%
ACCCTAAGCTCTCTGCCCGA+TGG + chr4_2:12394810-12394829 Msa0589460:CDS 60.0%
GGTGGCCGGAGTAAGAACCC+CGG + chr4_2:12387794-12387813 Msa0589460:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 12387057 12395640 12387057 ID=Msa0589460;Name=Msa0589460
chr4_2 mRNA 12387057 12395640 12387057 ID=Msa0589460-mRNA-1;Parent=Msa0589460;Name=Msa0589460-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0.81|0.83|1|0.63|0.66|12|151|417
chr4_2 exon 12387057 12387192 12387057 ID=Msa0589460-mRNA-1:exon:3621;Parent=Msa0589460-mRNA-1
chr4_2 exon 12388437 12388495 12388437 ID=Msa0589460-mRNA-1:exon:3622;Parent=Msa0589460-mRNA-1
chr4_2 exon 12392296 12392371 12392296 ID=Msa0589460-mRNA-1:exon:3623;Parent=Msa0589460-mRNA-1
chr4_2 exon 12392463 12392540 12392463 ID=Msa0589460-mRNA-1:exon:3624;Parent=Msa0589460-mRNA-1
chr4_2 exon 12392631 12392718 12392631 ID=Msa0589460-mRNA-1:exon:3625;Parent=Msa0589460-mRNA-1
chr4_2 exon 12393186 12393479 12393186 ID=Msa0589460-mRNA-1:exon:3626;Parent=Msa0589460-mRNA-1
chr4_2 exon 12393574 12393668 12393574 ID=Msa0589460-mRNA-1:exon:3627;Parent=Msa0589460-mRNA-1
chr4_2 exon 12394036 12394070 12394036 ID=Msa0589460-mRNA-1:exon:3628;Parent=Msa0589460-mRNA-1
chr4_2 exon 12394141 12394240 12394141 ID=Msa0589460-mRNA-1:exon:3629;Parent=Msa0589460-mRNA-1
chr4_2 exon 12394463 12394571 12394463 ID=Msa0589460-mRNA-1:exon:3630;Parent=Msa0589460-mRNA-1
chr4_2 exon 12394688 12394946 12394688 ID=Msa0589460-mRNA-1:exon:3631;Parent=Msa0589460-mRNA-1
chr4_2 exon 12395565 12395640 12395565 ID=Msa0589460-mRNA-1:exon:3632;Parent=Msa0589460-mRNA-1
chr4_2 CDS 12387057 12387192 12387057 ID=Msa0589460-mRNA-1:cds;Parent=Msa0589460-mRNA-1
chr4_2 CDS 12388437 12388495 12388437 ID=Msa0589460-mRNA-1:cds;Parent=Msa0589460-mRNA-1
chr4_2 CDS 12392296 12392371 12392296 ID=Msa0589460-mRNA-1:cds;Parent=Msa0589460-mRNA-1
chr4_2 CDS 12392463 12392540 12392463 ID=Msa0589460-mRNA-1:cds;Parent=Msa0589460-mRNA-1
chr4_2 CDS 12392631 12392718 12392631 ID=Msa0589460-mRNA-1:cds;Parent=Msa0589460-mRNA-1
chr4_2 CDS 12393186 12393479 12393186 ID=Msa0589460-mRNA-1:cds;Parent=Msa0589460-mRNA-1
chr4_2 CDS 12393574 12393668 12393574 ID=Msa0589460-mRNA-1:cds;Parent=Msa0589460-mRNA-1
chr4_2 CDS 12394036 12394070 12394036 ID=Msa0589460-mRNA-1:cds;Parent=Msa0589460-mRNA-1
chr4_2 CDS 12394141 12394240 12394141 ID=Msa0589460-mRNA-1:cds;Parent=Msa0589460-mRNA-1
chr4_2 CDS 12394463 12394571 12394463 ID=Msa0589460-mRNA-1:cds;Parent=Msa0589460-mRNA-1
chr4_2 CDS 12394688 12394871 12394688 ID=Msa0589460-mRNA-1:cds;Parent=Msa0589460-mRNA-1
chr4_2 three_prime_UTR 12394872 12394946 12394872 ID=Msa0589460-mRNA-1:three_prime_utr;Parent=Msa0589460-mRNA-1
chr4_2 three_prime_UTR 12395565 12395640 12395565 ID=Msa0589460-mRNA-1:three_prime_utr;Parent=Msa0589460-mRNA-1
Gene Sequence

>Msa0589460

ATGTTTATTTTAGGGGCGGGACCTGTTATTTCCTCTATTTATGCTGACAGTTTTGAGCTAAATCGGAGCAGTTTTCCGGAAGGTTTTGTTTTTGGTACTGGCTCCTCCAATTACCAGGTACGTTTTGTAACATTGTGGAAGGTAAAGGATGGAAAGAATGCAGATGTAGCTATTGATCACTATCATCGTTATAAGGAAGATGTTCAAATCATGAAGAATATGAATACAGATGCATACAGATTCTCCATATCTTGGCCAAGGATATTGCCAAAAGGAAAACTAAGTGGGGGTATTAACCCAGACGGAATTAGATTTTACAAAAACCTGATCGATGAGCTACTTAATAATGGTCAAATACCATATGTGACCCTTTTTCATTGGGATCTTCCCCAAGCCTTACAAGATGATTATGGAGGCTTTGTCAGCGAGAATATTAGAAAAGATTTTAAGGACTTTGTGGATATTTGCTTCCTGGAATTTGGAGACAAAGTAAAGCATTGGGTTACTTTTAATGAGCCATTCTCTTACACTTTGAGTACATCAGATTGGTACCAGTCAACACACAACCAACTTCTTGCTCATGCAGATGTTGTCGAAATGTATAAAACGAAATATCAGGGTCAAAATGGTGTAATAGGCATTGGATTAAACTCTCACTGGTTTAAACCATACTCAACTGACCCATTAGATCAAAAAGCCGTCCAAGACGCCCTTGATTTCATGTTTGGATGGTTTATACAACCACTGACAACAGGAGAGTATCCAGCAAGCATGGTGTCTTATGTGGGAGATAAGTTACCAAAGTTCACTCAAGAGCAATCTAAGAATGTGAATAAAGAAGGGACATACATTGGACCATGGGCTGCAACTTGGCTATATGTTTGTCCAAAAGGGATTCAGGACCTACTGTTGTACACAAAGGAAAAGTATAACAATCCTACCATTATCATAACAGAAAATGGTATGAATGAAGTCAATGATCCAACACTATCACTCGAAGAGGCGCTCATGGATACTTATAGAATTGATTACTTTTATCGTCATCTATATTATCTTTTATCTGCAATGAGGCAAGGTGTGAATGTAAAAGGATACTTTGCATGGTCCCTTTTGGACAACTTTGAATGGAATGACGGATACACTGTGCGTTTTGGAATTAACTTTGTTGATTATGACAATGGTCTTAGAAGACACCCTAAGCTCTCTGCCCGATGGTTTAGGAAGTTTCTTGAACATAATAGAATTATTGGTTGA
Protein sequence

>Msa0589460

MFILGAGPVISSIYADSFELNRSSFPEGFVFGTGSSNYQVRFVTLWKVKDGKNADVAIDHYHRYKEDVQIMKNMNTDAYRFSISWPRILPKGKLSGGINPDGIRFYKNLIDELLNNGQIPYVTLFHWDLPQALQDDYGGFVSENIRKDFKDFVDICFLEFGDKVKHWVTFNEPFSYTLSTSDWYQSTHNQLLAHADVVEMYKTKYQGQNGVIGIGLNSHWFKPYSTDPLDQKAVQDALDFMFGWFIQPLTTGEYPASMVSYVGDKLPKFTQEQSKNVNKEGTYIGPWAATWLYVCPKGIQDLLLYTKEKYNNPTIIITENGMNEVNDPTLSLEEALMDTYRIDYFYRHLYYLLSAMRQGVNVKGYFAWSLLDNFEWNDGYTVRFGINFVDYDNGLRRHPKLSARWFRKFLEHNRIIG*