Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314040 | sp|P38414|LOX1_LENCU | 65.201 | 819 | 239 | 11 | 37 | 823 | 62 | 866 | 0.0 | 1068 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314040 | G7LIY4 | 94.909 | 825 | 38 | 4 | 1 | 823 | 1 | 823 | 0.0 | 1605 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013270 | Msa1314040 | 0.803433 | 3.494852e-49 | -8.615850e-47 |
| Msa0014590 | Msa1314040 | 0.825758 | 3.936085e-54 | -8.615850e-47 |
| Msa0017710 | Msa1314040 | 0.810978 | 8.810066e-51 | -8.615850e-47 |
| Msa0020320 | Msa1314040 | -0.800108 | 1.682001e-48 | -8.615850e-47 |
| Msa0024650 | Msa1314040 | 0.804136 | 2.497163e-49 | -8.615850e-47 |
| Msa0059880 | Msa1314040 | 0.802910 | 4.483301e-49 | -8.615850e-47 |
| Msa0073270 | Msa1314040 | 0.815180 | 1.054821e-51 | -8.615850e-47 |
| Msa0106540 | Msa1314040 | 0.813830 | 2.098231e-51 | -8.615850e-47 |
| Msa0604200 | Msa1314040 | 0.801087 | 1.062124e-48 | -8.615850e-47 |
| Msa0604280 | Msa1314040 | 0.822421 | 2.390126e-53 | -8.615850e-47 |
| Msa0605480 | Msa1314040 | 0.821938 | 3.094639e-53 | -8.615850e-47 |
| Msa0629720 | Msa1314040 | 0.813878 | 2.047457e-51 | -8.615850e-47 |
| Msa0631700 | Msa1314040 | 0.804085 | 2.558498e-49 | -8.615850e-47 |
| Msa0634290 | Msa1314040 | 0.819054 | 1.420746e-52 | -8.615850e-47 |
| Msa0643840 | Msa1314040 | 0.800286 | 1.547820e-48 | -8.615850e-47 |
| Msa0645370 | Msa1314040 | 0.820638 | 6.170387e-53 | -8.615850e-47 |
| Msa0646010 | Msa1314040 | 0.804892 | 1.736769e-49 | -8.615850e-47 |
| Msa0646430 | Msa1314040 | 0.802575 | 5.257898e-49 | -8.615850e-47 |
| Msa0646440 | Msa1314040 | 0.820455 | 6.798202e-53 | -8.615850e-47 |
| Msa0665830 | Msa1314040 | 0.808524 | 2.968274e-50 | -8.615850e-47 |
| Msa0670360 | Msa1314040 | 0.817176 | 3.777594e-52 | -8.615850e-47 |
| Msa0678620 | Msa1314040 | 0.809370 | 1.956384e-50 | -8.615850e-47 |
| Msa0685080 | Msa1314040 | 0.812107 | 5.007063e-51 | -8.615850e-47 |
| Msa0727480 | Msa1314040 | 0.828094 | 1.088365e-54 | -8.615850e-47 |
| Msa0761830 | Msa1314040 | 0.810775 | 9.746716e-51 | -8.615850e-47 |
| Msa0768670 | Msa1314040 | 0.843962 | 1.014884e-58 | -8.615850e-47 |
| Msa0768720 | Msa1314040 | 0.841612 | 4.276451e-58 | -8.615850e-47 |
| Msa0777250 | Msa1314040 | 0.801235 | 9.909459e-49 | -8.615850e-47 |
| Msa0792410 | Msa1314040 | 0.800999 | 1.107184e-48 | -8.615850e-47 |
| Msa0804170 | Msa1314040 | 0.812069 | 5.102875e-51 | -8.615850e-47 |
| Msa0814230 | Msa1314040 | 0.831286 | 1.819756e-55 | -8.615850e-47 |
| Msa0131460 | Msa1314040 | 0.805978 | 1.028110e-49 | -8.615850e-47 |
| Msa0140270 | Msa1314040 | 0.818594 | 1.806519e-52 | -8.615850e-47 |
| Msa0147680 | Msa1314040 | 0.805313 | 1.417710e-49 | -8.615850e-47 |
| Msa0150910 | Msa1314040 | 0.807624 | 4.614846e-50 | -8.615850e-47 |
| Msa0160580 | Msa1314040 | 0.802300 | 5.990103e-49 | -8.615850e-47 |
| Msa0163340 | Msa1314040 | 0.819510 | 1.118265e-52 | -8.615850e-47 |
| Msa0190670 | Msa1314040 | 0.803235 | 3.840736e-49 | -8.615850e-47 |
| Msa0192830 | Msa1314040 | 0.808277 | 3.351875e-50 | -8.615850e-47 |
| Msa0196260 | Msa1314040 | 0.822567 | 2.210458e-53 | -8.615850e-47 |
| Msa0206370 | Msa1314040 | 0.802644 | 5.087459e-49 | -8.615850e-47 |
| Msa0209060 | Msa1314040 | 0.804788 | 1.826227e-49 | -8.615850e-47 |
| Msa0211460 | Msa1314040 | 0.805816 | 1.112241e-49 | -8.615850e-47 |
| Msa0219210 | Msa1314040 | 0.800708 | 1.269388e-48 | -8.615850e-47 |
| Msa0235080 | Msa1314040 | 0.832570 | 8.768674e-56 | -8.615850e-47 |
| Msa0238110 | Msa1314040 | 0.805047 | 1.611795e-49 | -8.615850e-47 |
| Msa1233640 | Msa1314040 | 0.904840 | 8.053475e-80 | -8.615850e-47 |
| Msa1238250 | Msa1314040 | 0.802187 | 6.320092e-49 | -8.615850e-47 |
| Msa1255710 | Msa1314040 | 0.843351 | 1.478331e-58 | -8.615850e-47 |
| Msa1265570 | Msa1314040 | 0.810148 | 1.330951e-50 | -8.615850e-47 |
| Msa1269050 | Msa1314040 | 0.816930 | 4.290126e-52 | -8.615850e-47 |
| Msa1275860 | Msa1314040 | 0.908905 | 1.024643e-81 | -8.615850e-47 |
| Msa1275870 | Msa1314040 | 0.845337 | 4.325312e-59 | -8.615850e-47 |
| Msa1300610 | Msa1314040 | 0.839576 | 1.459288e-57 | -8.615850e-47 |
| Msa1314040 | Msa1314050 | 0.819656 | 1.035734e-52 | -8.615850e-47 |
| Msa1314040 | Msa1319030 | 0.809634 | 1.717025e-50 | -8.615850e-47 |
| Msa1314040 | Msa1323120 | 0.800685 | 1.283171e-48 | -8.615850e-47 |
| Msa1314040 | Msa1329740 | 0.838661 | 2.518649e-57 | -8.615850e-47 |
| Msa1314040 | Msa1334670 | 0.815767 | 7.809209e-52 | -8.615850e-47 |
| Msa1314040 | Msa1355340 | 0.804039 | 2.615356e-49 | -8.615850e-47 |
| Msa1314040 | Msa1357490 | 0.813409 | 2.597119e-51 | -8.615850e-47 |
| Msa1314040 | Msa1357840 | 0.811569 | 6.555700e-51 | -8.615850e-47 |
| Msa1314040 | Msa1365230 | 0.816146 | 6.428534e-52 | -8.615850e-47 |
| Msa1314040 | Msa1365850 | 0.801454 | 8.934890e-49 | -8.615850e-47 |
| Msa1314040 | Msa1376070 | 0.802829 | 4.660267e-49 | -8.615850e-47 |
| Msa1314040 | Msa1405830 | 0.809862 | 1.534418e-50 | -8.615850e-47 |
| Msa1314040 | Msa1409600 | 0.813022 | 3.157966e-51 | -8.615850e-47 |
| Msa1314040 | Msa1411550 | 0.807380 | 5.198967e-50 | -8.615850e-47 |
| Msa1314040 | Msa1413020 | 0.811470 | 6.890151e-51 | -8.615850e-47 |
| Msa1314040 | Msa1420020 | 0.810592 | 1.067794e-50 | -8.615850e-47 |
| Msa1314040 | Msa1445900 | 0.823046 | 1.709726e-53 | -8.615850e-47 |
| Msa1314040 | Msa1451660 | 0.817634 | 2.978042e-52 | -8.615850e-47 |
| Msa1314040 | Msa1455360 | 0.809388 | 1.939582e-50 | -8.615850e-47 |
| Msa1314040 | Msa1459610 | 0.865051 | 7.814799e-65 | -8.615850e-47 |
| Msa1314040 | Msa1461660 | 0.800720 | 1.262344e-48 | -8.615850e-47 |
| Msa0366510 | Msa1314040 | 0.804356 | 2.247015e-49 | -8.615850e-47 |
| Msa0414480 | Msa1314040 | 0.836404 | 9.543326e-57 | -8.615850e-47 |
| Msa0430460 | Msa1314040 | 0.800789 | 1.222088e-48 | -8.615850e-47 |
| Msa0437540 | Msa1314040 | 0.800330 | 1.516383e-48 | -8.615850e-47 |
| Msa0444200 | Msa1314040 | 0.805149 | 1.534437e-49 | -8.615850e-47 |
| Msa0469550 | Msa1314040 | 0.812678 | 3.757214e-51 | -8.615850e-47 |
| Msa0471390 | Msa1314040 | 0.804338 | 2.266548e-49 | -8.615850e-47 |
| Msa0481670 | Msa1314040 | 0.814541 | 1.462112e-51 | -8.615850e-47 |
| Msa0987640 | Msa1314040 | 0.822521 | 2.266506e-53 | -8.615850e-47 |
| Msa0996980 | Msa1314040 | 0.805417 | 1.348501e-49 | -8.615850e-47 |
| Msa0996990 | Msa1314040 | 0.800307 | 1.532301e-48 | -8.615850e-47 |
| Msa1003110 | Msa1314040 | 0.816396 | 5.650276e-52 | -8.615850e-47 |
| Msa1004720 | Msa1314040 | -0.812679 | 3.754660e-51 | -8.615850e-47 |
| Msa1007930 | Msa1314040 | 0.812806 | 3.522226e-51 | -8.615850e-47 |
| Msa1021620 | Msa1314040 | 0.819883 | 9.189808e-53 | -8.615850e-47 |
| Msa1030320 | Msa1314040 | 0.802102 | 6.578018e-49 | -8.615850e-47 |
| Msa1036020 | Msa1314040 | 0.809574 | 1.768917e-50 | -8.615850e-47 |
| Msa1041910 | Msa1314040 | 0.805288 | 1.435407e-49 | -8.615850e-47 |
| Msa1048390 | Msa1314040 | 0.829027 | 6.476281e-55 | -8.615850e-47 |
| Msa1061670 | Msa1314040 | 0.853897 | 1.763700e-61 | -8.615850e-47 |
| Msa1063210 | Msa1314040 | 0.800015 | 1.757070e-48 | -8.615850e-47 |
| Msa1064940 | Msa1314040 | 0.802537 | 5.352413e-49 | -8.615850e-47 |
| Msa1076280 | Msa1314040 | 0.806096 | 9.708217e-50 | -8.615850e-47 |
| Msa1087370 | Msa1314040 | 0.802990 | 4.316113e-49 | -8.615850e-47 |
| Msa1087380 | Msa1314040 | 0.801728 | 7.851385e-49 | -8.615850e-47 |
| Msa1103450 | Msa1314040 | 0.806517 | 7.916240e-50 | -8.615850e-47 |
| Msa1106680 | Msa1314040 | 0.811864 | 5.654942e-51 | -8.615850e-47 |
| Msa1106960 | Msa1314040 | 0.850084 | 2.134395e-60 | -8.615850e-47 |
| Msa0260980 | Msa1314040 | 0.804317 | 2.288754e-49 | -8.615850e-47 |
| Msa0273360 | Msa1314040 | 0.830528 | 2.792115e-55 | -8.615850e-47 |
| Msa0274250 | Msa1314040 | 0.807143 | 5.836936e-50 | -8.615850e-47 |
| Msa0278460 | Msa1314040 | 0.805377 | 1.375074e-49 | -8.615850e-47 |
| Msa0278940 | Msa1314040 | 0.818461 | 1.936633e-52 | -8.615850e-47 |
| Msa0298270 | Msa1314040 | 0.819624 | 1.053386e-52 | -8.615850e-47 |
| Msa0313620 | Msa1314040 | 0.820308 | 7.345227e-53 | -8.615850e-47 |
| Msa0316000 | Msa1314040 | 0.808245 | 3.404089e-50 | -8.615850e-47 |
| Msa0328090 | Msa1314040 | 0.806773 | 6.990367e-50 | -8.615850e-47 |
| Msa0336520 | Msa1314040 | 0.810215 | 1.287897e-50 | -8.615850e-47 |
| Msa0348370 | Msa1314040 | 0.824473 | 7.920612e-54 | -8.615850e-47 |
| Msa0349930 | Msa1314040 | 0.810205 | 1.294375e-50 | -8.615850e-47 |
| Msa1109540 | Msa1314040 | 0.813444 | 2.552146e-51 | -8.615850e-47 |
| Msa1115900 | Msa1314040 | 0.800960 | 1.127879e-48 | -8.615850e-47 |
| Msa1133860 | Msa1314040 | 0.810573 | 1.077998e-50 | -8.615850e-47 |
| Msa1147010 | Msa1314040 | 0.808808 | 2.582102e-50 | -8.615850e-47 |
| Msa1162370 | Msa1314040 | 0.802155 | 6.414458e-49 | -8.615850e-47 |
| Msa1167960 | Msa1314040 | 0.807617 | 4.631162e-50 | -8.615850e-47 |
| Msa1179170 | Msa1314040 | 0.874119 | 8.664626e-68 | -8.615850e-47 |
| Msa1192360 | Msa1314040 | 0.803049 | 4.196529e-49 | -8.615850e-47 |
| Msa1217890 | Msa1314040 | 0.809700 | 1.662044e-50 | -8.615850e-47 |
| Msa1220720 | Msa1314040 | 0.816459 | 5.471119e-52 | -8.615850e-47 |
| Msa0487100 | Msa1314040 | 0.810924 | 9.048055e-51 | -8.615850e-47 |
| Msa0515260 | Msa1314040 | 0.812719 | 3.679308e-51 | -8.615850e-47 |
| Msa0531030 | Msa1314040 | 0.827963 | 1.170446e-54 | -8.615850e-47 |
| Msa0531080 | Msa1314040 | 0.826214 | 3.067319e-54 | -8.615850e-47 |
| Msa0532660 | Msa1314040 | 0.804442 | 2.156345e-49 | -8.615850e-47 |
| Msa0535570 | Msa1314040 | 0.816069 | 6.687338e-52 | -8.615850e-47 |
| Msa0538520 | Msa1314040 | 0.800819 | 1.205184e-48 | -8.615850e-47 |
| Msa0543740 | Msa1314040 | 0.813964 | 1.960228e-51 | -8.615850e-47 |
| Msa0549170 | Msa1314040 | 0.843814 | 1.111353e-58 | -8.615850e-47 |
| Msa0549960 | Msa1314040 | 0.814237 | 1.706871e-51 | -8.615850e-47 |
| Msa0549970 | Msa1314040 | 0.818606 | 1.795836e-52 | -8.615850e-47 |
| Msa0554660 | Msa1314040 | 0.827978 | 1.160676e-54 | -8.615850e-47 |
| Msa0587730 | Msa1314040 | 0.804597 | 2.001823e-49 | -8.615850e-47 |
| Msa0587920 | Msa1314040 | 0.811560 | 6.586093e-51 | -8.615850e-47 |
| Msa0589460 | Msa1314040 | 0.812437 | 4.241201e-51 | -8.615850e-47 |
| Msa0591490 | Msa1314040 | 0.821020 | 5.040081e-53 | -8.615850e-47 |
| Msa0863840 | Msa1314040 | 0.802107 | 6.563077e-49 | -8.615850e-47 |
| Msa0880910 | Msa1314040 | 0.801221 | 9.973100e-49 | -8.615850e-47 |
| Msa0893840 | Msa1314040 | 0.814420 | 1.554974e-51 | -8.615850e-47 |
| Msa0896920 | Msa1314040 | 0.828345 | 9.466050e-55 | -8.615850e-47 |
| Msa0913550 | Msa1314040 | 0.847151 | 1.386209e-59 | -8.615850e-47 |
| Msa0946010 | Msa1314040 | 0.801283 | 9.685844e-49 | -8.615850e-47 |
| Msa0951150 | Msa1314040 | 0.821230 | 4.509059e-53 | -8.615850e-47 |
| Msa0962290 | Msa1314040 | 0.815303 | 9.908016e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314040 | MtrunA17_Chr8g0342981 | 94.909 | 825 | 38 | 4 | 1 | 823 | 1 | 823 | 0.0 | 1605 |
| Msa1314040 | MtrunA17_Chr8g0342971 | 67.643 | 819 | 218 | 13 | 38 | 823 | 66 | 870 | 0.0 | 1102 |
| Msa1314040 | MtrunA17_Chr8g0344211 | 66.748 | 821 | 228 | 9 | 34 | 823 | 62 | 868 | 0.0 | 1093 |
| Msa1314040 | MtrunA17_Chr8g0343011 | 66.052 | 813 | 236 | 10 | 37 | 823 | 67 | 865 | 0.0 | 1088 |
| Msa1314040 | MtrunA17_Chr8g0342891 | 64.677 | 821 | 245 | 10 | 34 | 823 | 55 | 861 | 0.0 | 1073 |
| Msa1314040 | MtrunA17_Chr8g0342951 | 66.504 | 821 | 230 | 11 | 34 | 823 | 62 | 868 | 0.0 | 1068 |
| Msa1314040 | MtrunA17_Chr8g0342921 | 64.103 | 819 | 247 | 13 | 37 | 823 | 66 | 869 | 0.0 | 1048 |
| Msa1314040 | MtrunA17_Chr8g0342901 | 63.158 | 798 | 264 | 10 | 32 | 823 | 55 | 828 | 0.0 | 1015 |
| Msa1314040 | MtrunA17_Chr8g0342931 | 66.227 | 758 | 218 | 7 | 93 | 823 | 4 | 750 | 0.0 | 1014 |
| Msa1314040 | MtrunA17_Chr8g0342991 | 60.993 | 846 | 268 | 13 | 1 | 823 | 1 | 807 | 0.0 | 996 |
| Msa1314040 | MtrunA17_Chr8g0343001 | 58.706 | 850 | 281 | 13 | 1 | 823 | 1 | 807 | 0.0 | 960 |
| Msa1314040 | MtrunA17_Chr8g0342881 | 58.343 | 821 | 297 | 10 | 34 | 823 | 50 | 856 | 0.0 | 957 |
| Msa1314040 | MtrunA17_Chr2g0329911 | 58.974 | 819 | 289 | 12 | 37 | 823 | 58 | 861 | 0.0 | 947 |
| Msa1314040 | MtrunA17_Chr2g0329901 | 56.724 | 818 | 306 | 12 | 37 | 823 | 63 | 863 | 0.0 | 901 |
| Msa1314040 | MtrunA17_Chr5g0406871 | 56.098 | 820 | 310 | 14 | 37 | 823 | 65 | 867 | 0.0 | 889 |
| Msa1314040 | MtrunA17_Chr8g0343031 | 55.678 | 819 | 314 | 14 | 37 | 823 | 64 | 865 | 0.0 | 883 |
| Msa1314040 | MtrunA17_Chr8g0343021 | 54.701 | 819 | 322 | 13 | 37 | 823 | 63 | 864 | 0.0 | 869 |
| Msa1314040 | MtrunA17_Chr3g0120071 | 54.335 | 819 | 331 | 12 | 34 | 823 | 54 | 858 | 0.0 | 868 |
| Msa1314040 | MtrunA17_Chr7g0272791 | 51.333 | 863 | 357 | 18 | 10 | 823 | 19 | 867 | 0.0 | 828 |
| Msa1314040 | MtrunA17_Chr1g0191921 | 53.576 | 825 | 330 | 15 | 37 | 823 | 49 | 858 | 0.0 | 825 |
| Msa1314040 | MtrunA17_Chr1g0205611 | 51.143 | 831 | 349 | 16 | 37 | 823 | 39 | 856 | 0.0 | 808 |
| Msa1314040 | MtrunA17_Chr8g0344201 | 44.037 | 763 | 381 | 11 | 93 | 822 | 177 | 926 | 0.0 | 636 |
| Msa1314040 | MtrunA17_Chr8g0344241 | 73.116 | 398 | 103 | 2 | 427 | 823 | 67 | 461 | 0.0 | 598 |
| Msa1314040 | MtrunA17_Chr3g0118651 | 42.711 | 782 | 404 | 15 | 72 | 823 | 136 | 903 | 0.0 | 593 |
| Msa1314040 | MtrunA17_Chr8g0377101 | 40.361 | 830 | 429 | 17 | 37 | 823 | 110 | 916 | 0.0 | 576 |
| Msa1314040 | MtrunA17_Chr3g0118641 | 41.793 | 792 | 397 | 16 | 72 | 823 | 135 | 902 | 0.0 | 576 |
| Msa1314040 | MtrunA17_Chr8g0338451 | 38.407 | 841 | 443 | 19 | 18 | 809 | 42 | 856 | 0.0 | 563 |
| Msa1314040 | MtrunA17_Chr4g0047281 | 40.479 | 751 | 401 | 14 | 93 | 822 | 169 | 894 | 0.0 | 561 |
| Msa1314040 | MtrunA17_Chr4g0033171 | 42.659 | 722 | 357 | 13 | 139 | 823 | 24 | 725 | 0.0 | 550 |
| Msa1314040 | MtrunA17_Chr3g0118621 | 42.632 | 760 | 396 | 14 | 94 | 823 | 116 | 865 | 3.87e-178 | 535 |
| Msa1314040 | MtrunA17_Chr6g0471951 | 38.689 | 473 | 243 | 7 | 311 | 778 | 44 | 474 | 1.18e-108 | 342 |
| Msa1314040 | MtrunA17_Chr7g0218231 | 61.207 | 116 | 44 | 1 | 479 | 593 | 17 | 132 | 1.87e-41 | 148 |
| Msa1314040 | MtrunA17_Chr6g0468081 | 56.180 | 89 | 38 | 1 | 506 | 593 | 1 | 89 | 8.09e-26 | 102 |
| Msa1314040 | MtrunA17_Chr4g0047271 | 41.758 | 91 | 53 | 0 | 732 | 822 | 1 | 91 | 1.51e-17 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314040 | AT1G55020.1 | 52.000 | 825 | 342 | 17 | 37 | 823 | 51 | 859 | 0.0 | 808 |
| Msa1314040 | AT3G22400.1 | 48.968 | 872 | 376 | 19 | 9 | 823 | 27 | 886 | 0.0 | 799 |
| Msa1314040 | AT1G17420.1 | 45.085 | 763 | 374 | 12 | 92 | 823 | 171 | 919 | 0.0 | 644 |
| Msa1314040 | AT1G72520.1 | 43.359 | 768 | 381 | 12 | 92 | 823 | 177 | 926 | 0.0 | 634 |
| Msa1314040 | AT3G45140.1 | 40.898 | 846 | 426 | 23 | 17 | 823 | 86 | 896 | 0.0 | 573 |
| Msa1314040 | AT3G45140.2 | 42.523 | 769 | 380 | 19 | 94 | 823 | 9 | 754 | 0.0 | 570 |
| Msa1314040 | AT1G67560.1 | 40.410 | 829 | 429 | 20 | 37 | 823 | 112 | 917 | 0.0 | 557 |
Find 188 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCACTGATTTAGCATTAAT+TGG | 0.113920 | 8_4:+12423566 | None:intergenic |
| CTTCATGCAGCTGTTAATTT+TGG | 0.155837 | 8_4:-12421714 | Msa1314040:CDS |
| TCATCTTTAACATCTTTATT+TGG | 0.164702 | 8_4:+12422766 | None:intergenic |
| ACGTAATATTGAATTGAAAT+TGG | 0.167485 | 8_4:+12424481 | None:intergenic |
| ATTTCGTGATCGTGCATTTA+TGG | 0.174964 | 8_4:+12422459 | None:intergenic |
| GACTTGGGTCGTCCAGTTCT+TGG | 0.187573 | 8_4:-12424011 | Msa1314040:CDS |
| CATCTTTAACATCTTTATTT+GGG | 0.193179 | 8_4:+12422767 | None:intergenic |
| CTATCTAACTTGCTCTTTCT+TGG | 0.212968 | 8_4:+12423181 | None:intergenic |
| GCATTTACTTTCCTCAAATA+TGG | 0.213554 | 8_4:+12422928 | None:intergenic |
| CCCTTCCGACTCTCAGTCTT+TGG | 0.218642 | 8_4:+12423758 | None:intergenic |
| AGTGGGAGAGCGAACATATT+TGG | 0.226436 | 8_4:-12424529 | Msa1314040:CDS |
| GAAAGGATCCCATGAGTTTA+AGG | 0.229876 | 8_4:-12421628 | Msa1314040:CDS |
| AAGATGACGAACCTTTAATT+TGG | 0.260253 | 8_4:-12422750 | Msa1314040:CDS |
| ATGAGGAACTCAGAGCATTT+TGG | 0.263372 | 8_4:-12421851 | Msa1314040:CDS |
| GGACTACATGAAGACATATT+TGG | 0.266844 | 8_4:-12421595 | Msa1314040:CDS |
| GAATGCTAAGTGGGTTAAAA+TGG | 0.267598 | 8_4:-12421793 | Msa1314040:CDS |
| ACCCTTGATGTTCCAAATCT+TGG | 0.280311 | 8_4:-12424366 | Msa1314040:CDS |
| TTTCTCTGGCATGAATCTTA+TGG | 0.281030 | 8_4:+12421647 | None:intergenic |
| TGTCCAAGGTATTCCTCATT+AGG | 0.283725 | 8_4:+12421504 | None:intergenic |
| ACTTGGGTCGTCCAGTTCTT+GGG | 0.289714 | 8_4:-12424010 | Msa1314040:CDS |
| GTTTGGCTCCAAGTGTTCTT+TGG | 0.296808 | 8_4:+12423126 | None:intergenic |
| TTTGCAAGGAGCCAAATTAA+AGG | 0.323385 | 8_4:+12422739 | None:intergenic |
| CATCCTAATGGTGATAGTTT+TGG | 0.332322 | 8_4:-12422814 | Msa1314040:CDS |
| CGTAATATTGAATTGAAATT+GGG | 0.336297 | 8_4:+12424482 | None:intergenic |
| TTGTAGGCTTCTACTGGCTC+TGG | 0.340356 | 8_4:+12421450 | None:intergenic |
| AAGTTGATGGTTCCAAGATT+TGG | 0.344231 | 8_4:+12424354 | None:intergenic |
| CCACTGATTTAGCATTAATT+GGG | 0.359882 | 8_4:+12423567 | None:intergenic |
| CAGCTGTTGTTTACAAGGAT+TGG | 0.364104 | 8_4:-12422369 | Msa1314040:CDS |
| ACTGTGACCCCATCCATGTT+TGG | 0.364475 | 8_4:+12423109 | None:intergenic |
| ACTTCAAGGGTTTCAACCTT+TGG | 0.366918 | 8_4:+12421561 | None:intergenic |
| GTAGCCTTACCTTTCTTACT+TGG | 0.369109 | 8_4:+12423924 | None:intergenic |
| CTGTTGATGGACTAGAGATA+TGG | 0.369958 | 8_4:-12421944 | Msa1314040:CDS |
| AATTCAATATTACGTTTGAA+TGG | 0.370219 | 8_4:-12424473 | Msa1314040:CDS |
| CTACGATGTCTACAATGATT+TGG | 0.375479 | 8_4:-12424054 | Msa1314040:CDS |
| GAAGAGTTGAAGACTTTAAG+AGG | 0.376977 | 8_4:-12424119 | Msa1314040:CDS |
| AGCTGTTGTTTACAAGGATT+GGG | 0.377805 | 8_4:-12422368 | Msa1314040:CDS |
| AAAGAACTGAAGGTGATCTT+TGG | 0.382740 | 8_4:-12421482 | Msa1314040:CDS |
| GAGCTGGTGTTTCACTTAGA+AGG | 0.387861 | 8_4:+12424162 | None:intergenic |
| CAACAAGGTCACAAAGCTTA+AGG | 0.388273 | 8_4:-12426087 | Msa1314040:CDS |
| CATTCGTCATAGCAACAAAT+AGG | 0.394550 | 8_4:-12422543 | Msa1314040:CDS |
| ACTCTTGCACTACCCTCATA+TGG | 0.396428 | 8_4:-12421749 | Msa1314040:CDS |
| AACTCATGGGATCCTTTCTC+TGG | 0.406308 | 8_4:+12421633 | None:intergenic |
| CCCAAGTCAGCCTCTTTGTC+TGG | 0.409139 | 8_4:+12424026 | None:intergenic |
| TGAGTTGCAGATAAAGTTGA+TGG | 0.410883 | 8_4:+12424341 | None:intergenic |
| GTGTTCTTTGGTTATTGTGC+TGG | 0.414888 | 8_4:+12423138 | None:intergenic |
| AAAGAAATTGATTGAAATTG+AGG | 0.415217 | 8_4:-12421418 | Msa1314040:CDS |
| GGAACTAAAAGTTTATGAAT+TGG | 0.415574 | 8_4:+12422502 | None:intergenic |
| CTTTATCCTTCCAGTGGACC+AGG | 0.416744 | 8_4:-12421321 | Msa1314040:CDS |
| AGCATCAAAGATGACTTCAT+TGG | 0.418451 | 8_4:-12426129 | None:intergenic |
| GTGGGAGAGCGAACATATTT+GGG | 0.423494 | 8_4:-12424528 | Msa1314040:CDS |
| GGCAAGTAAACATTACTAAC+AGG | 0.430747 | 8_4:+12422790 | None:intergenic |
| TCTTGTCTATAGTAGACTAA+TGG | 0.431200 | 8_4:+12424140 | None:intergenic |
| TCTAGTCCATCAACAGCATA+TGG | 0.431259 | 8_4:+12421951 | None:intergenic |
| GAAGGATAAAGAAGAGTGTA+TGG | 0.437895 | 8_4:+12421333 | None:intergenic |
| TGCTGCTGATCCTTCCATCC+CGG | 0.439402 | 8_4:-12426033 | Msa1314040:CDS |
| AGGAAATGGAAAAGGAAAAG+TGG | 0.439449 | 8_4:-12424547 | Msa1314040:CDS |
| GAACTAAAAGTTTATGAATT+GGG | 0.442063 | 8_4:+12422503 | None:intergenic |
| AATGTCAGCTGTTGTTTACA+AGG | 0.448150 | 8_4:-12422374 | Msa1314040:CDS |
| GCCAGACAAAGAGGCTGACT+TGG | 0.449309 | 8_4:-12424027 | Msa1314040:CDS |
| TACGATGTCTACAATGATTT+GGG | 0.450405 | 8_4:-12424053 | Msa1314040:CDS |
| ATTCAATATTACGTTTGAAT+GGG | 0.452062 | 8_4:-12424472 | Msa1314040:CDS |
| TACTTAGTATATCAGTATCA+TGG | 0.454258 | 8_4:+12423624 | None:intergenic |
| GGACCAAAACTATCACCATT+AGG | 0.454709 | 8_4:+12422811 | None:intergenic |
| AACAAGGTCACAAAGCTTAA+GGG | 0.460236 | 8_4:-12426086 | Msa1314040:CDS |
| AAGTTAGATAGTAAACTCTA+TGG | 0.460764 | 8_4:-12423169 | Msa1314040:CDS |
| GGATGGAACTTTGAATCCAT+TGG | 0.462431 | 8_4:-12422857 | Msa1314040:CDS |
| GATTATCCATATGCTGTTGA+TGG | 0.465219 | 8_4:-12421957 | Msa1314040:CDS |
| GATCTTACCCTTCGAGGGTA+AGG | 0.465611 | 8_4:+12423957 | None:intergenic |
| GTGTGAAGTAATTCATCTCT+TGG | 0.466557 | 8_4:+12423722 | None:intergenic |
| TTGAAGACTTTAAGAGGAGA+TGG | 0.467418 | 8_4:-12424113 | Msa1314040:CDS |
| GCTGCTGATCCTTCCATCCC+GGG | 0.468082 | 8_4:-12426032 | Msa1314040:CDS |
| CACCTTCAGTTCTTTGTCCA+AGG | 0.475536 | 8_4:+12421490 | None:intergenic |
| CACAATAACCAAAGAACACT+TGG | 0.476943 | 8_4:-12423134 | Msa1314040:CDS |
| ATGCAATCTATCCATATTTG+AGG | 0.477015 | 8_4:-12422939 | Msa1314040:CDS |
| CTAAGTTTGCCACATCCTAA+TGG | 0.478321 | 8_4:-12422826 | Msa1314040:CDS |
| GTGCTGAAGCAATCCATATG+AGG | 0.478585 | 8_4:+12421736 | None:intergenic |
| CTTGGGTCGTCCAGTTCTTG+GGG | 0.478606 | 8_4:-12424009 | Msa1314040:CDS |
| CATAGTATTCATAACTTCAA+GGG | 0.479502 | 8_4:+12421548 | None:intergenic |
| ATCCCTCTACCGGTCAATCC+TGG | 0.481528 | 8_4:+12421303 | None:intergenic |
| ACCGGTCAATCCTGGTCCAC+TGG | 0.482600 | 8_4:+12421311 | None:intergenic |
| TGAATGGGACACTGAAAAGA+TGG | 0.486422 | 8_4:-12424457 | Msa1314040:CDS |
| TTTGCAAGACAGATGATTGC+TGG | 0.490818 | 8_4:-12423365 | Msa1314040:CDS |
| TAGCGAGCTCCTTAAACTCA+TGG | 0.496735 | 8_4:+12421619 | None:intergenic |
| AACGGGTGAGCGCAAAGAAT+GGG | 0.497372 | 8_4:-12424090 | Msa1314040:CDS |
| AAGATGGGAGCTCCATCCCC+AGG | 0.498433 | 8_4:-12424441 | Msa1314040:CDS |
| GGACCAGGATTGACCGGTAG+AGG | 0.499249 | 8_4:-12421306 | Msa1314040:CDS |
| TGGTCTGCGTCTTCTGATAG+AGG | 0.500498 | 8_4:-12421979 | Msa1314040:CDS |
| CTACCAGATCTTACCCTTCG+AGG | 0.502272 | 8_4:+12423951 | None:intergenic |
| CCAACACCACAAGTGATTGC+AGG | 0.504972 | 8_4:-12423527 | Msa1314040:intron |
| CACTTGGAGCCAAACATGGA+TGG | 0.506365 | 8_4:-12423118 | Msa1314040:CDS |
| TTTAATTTGGCTCCTTGCAA+AGG | 0.507483 | 8_4:-12422737 | Msa1314040:CDS |
| TGAAGTTATGAATACTATGC+TGG | 0.513367 | 8_4:-12421544 | Msa1314040:CDS |
| ATCTTTAACATCTTTATTTG+GGG | 0.514164 | 8_4:+12422768 | None:intergenic |
| GCATAGTATTCATAACTTCA+AGG | 0.518741 | 8_4:+12421547 | None:intergenic |
| GAACGGGTGAGCGCAAAGAA+TGG | 0.519285 | 8_4:-12424091 | Msa1314040:CDS |
| GGTAGAGAACCAAGTAAGAA+AGG | 0.522835 | 8_4:-12423933 | Msa1314040:intron |
| TCAACTTTATCTGCAACTCA+TGG | 0.523897 | 8_4:-12424338 | Msa1314040:CDS |
| AAGAATGGTTCTAGCAGCAT+AGG | 0.523930 | 8_4:+12422891 | None:intergenic |
| ATAAGATTCATGCCAGAGAA+AGG | 0.523973 | 8_4:-12421645 | Msa1314040:CDS |
| CCTGCAATCACTTGTGGTGT+TGG | 0.524027 | 8_4:+12423527 | None:intergenic |
| TTGGAAAGAACTTGTAGAAG+TGG | 0.524808 | 8_4:-12421832 | Msa1314040:CDS |
| TTCCATCCCGGGTCGTTCTG+TGG | 0.526330 | 8_4:-12426021 | Msa1314040:CDS |
| CAGATTGATTAGTGATTCCA+CGG | 0.526943 | 8_4:-12425994 | Msa1314040:CDS |
| TGGAAAGAACTTGTAGAAGT+GGG | 0.530595 | 8_4:-12421831 | Msa1314040:CDS |
| TCCAGTGGACCAGGATTGAC+CGG | 0.531569 | 8_4:-12421312 | Msa1314040:CDS |
| GACTTTAAGAGGAGATGGAA+CGG | 0.533638 | 8_4:-12424108 | Msa1314040:CDS |
| TTTGGGAAGTCTTATTACCT+CGG | 0.534922 | 8_4:-12424511 | Msa1314040:CDS |
| TTCCAAGATTTGGAACATCA+AGG | 0.534980 | 8_4:+12424364 | None:intergenic |
| TTGAAATTGGGTTTCATCCG+AGG | 0.535165 | 8_4:+12424494 | None:intergenic |
| CCCAATTAATGCTAAATCAG+TGG | 0.536006 | 8_4:-12423567 | Msa1314040:CDS |
| TACCCTCGAAGGGTAAGATC+TGG | 0.536332 | 8_4:-12423954 | Msa1314040:CDS |
| ACTTTAAGAGGAGATGGAAC+GGG | 0.538118 | 8_4:-12424107 | Msa1314040:CDS |
| ATTAGTGATTCCACGGCTGA+TGG | 0.539092 | 8_4:-12425987 | Msa1314040:intron |
| CTCACCAATGGCTGACGAGT+TGG | 0.542116 | 8_4:+12422683 | None:intergenic |
| GGAAATGGAAAAGGAAAAGT+GGG | 0.542323 | 8_4:-12424546 | Msa1314040:CDS |
| CTATTTGTTGCTATGACGAA+TGG | 0.543162 | 8_4:+12422544 | None:intergenic |
| TGTTGATGGACTAGAGATAT+GGG | 0.545247 | 8_4:-12421943 | Msa1314040:CDS |
| ACTTGGAGCCAAACATGGAT+GGG | 0.545456 | 8_4:-12423117 | Msa1314040:CDS |
| CAACAGCATATGCCTTTGCA+AGG | 0.546438 | 8_4:+12422725 | None:intergenic |
| ATTTGTGTAGGAAATGGAAA+AGG | 0.547881 | 8_4:-12424555 | Msa1314040:intron |
| GTCACCAACTCGTCAGCCAT+TGG | 0.549394 | 8_4:-12422687 | Msa1314040:intron |
| GACGATGATTCTTCCCCACA+TGG | 0.553935 | 8_4:-12421999 | Msa1314040:CDS |
| ATTAATTGGGGAAAGTTCGT+TGG | 0.554684 | 8_4:+12423580 | None:intergenic |
| TTGCTTATTATCTAGAGGAG+TGG | 0.555634 | 8_4:-12422027 | Msa1314040:intron |
| AGCCACAGAACGACCCGGGA+TGG | 0.555840 | 8_4:+12426019 | None:intergenic |
| CTATAGTAGACTAATGGAGC+TGG | 0.556484 | 8_4:+12424146 | None:intergenic |
| ATGTGGCAAACTTAGCTCAA+TGG | 0.559945 | 8_4:+12422834 | None:intergenic |
| CTGAAAGCCACAGAACGACC+CGG | 0.560077 | 8_4:+12426014 | None:intergenic |
| AGCGAGCTCCTTAAACTCAT+GGG | 0.561213 | 8_4:+12421620 | None:intergenic |
| AGAACACTTGGAGCCAAACA+TGG | 0.561811 | 8_4:-12423122 | Msa1314040:CDS |
| TTGAGGAAGAGTTCATTCAA+AGG | 0.562917 | 8_4:-12421401 | Msa1314040:CDS |
| GATCCTAATGAGGAATACCT+TGG | 0.563947 | 8_4:-12421507 | Msa1314040:CDS |
| GGATGGGGTCACAGTAAAAG+AGG | 0.568212 | 8_4:-12423101 | Msa1314040:intron |
| TATGGGCTGCTATCAAGTCA+TGG | 0.569976 | 8_4:-12421926 | Msa1314040:CDS |
| GTGAGCGCAAAGAATGGGAT+AGG | 0.571677 | 8_4:-12424085 | Msa1314040:CDS |
| TCCAAGATTTGGAACATCAA+GGG | 0.571677 | 8_4:+12424365 | None:intergenic |
| TAAAGATGTTAAAGATGATG+AGG | 0.573052 | 8_4:-12421868 | Msa1314040:CDS |
| AGAGTGTATGGAAACTTCAC+AGG | 0.573626 | 8_4:+12421345 | None:intergenic |
| GAGTGACAACACATCTTGAA+AGG | 0.575030 | 8_4:+12423664 | None:intergenic |
| GAAACTTCACAGGCCCATAC+CGG | 0.575716 | 8_4:+12421355 | None:intergenic |
| GTCATCGTGCCACGATAGTG+TGG | 0.579536 | 8_4:+12422481 | None:intergenic |
| CACTGATTTAGCATTAATTG+GGG | 0.580014 | 8_4:+12423568 | None:intergenic |
| ACTCTTCTTTATCCTTCCAG+TGG | 0.580368 | 8_4:-12421327 | Msa1314040:CDS |
| ATCCATGCATGATCCTAATG+AGG | 0.583398 | 8_4:-12421517 | Msa1314040:CDS |
| TTCCTCATTAGGATCATGCA+TGG | 0.584765 | 8_4:+12421515 | None:intergenic |
| ATGGGCTGCTATCAAGTCAT+GGG | 0.588409 | 8_4:-12421925 | Msa1314040:CDS |
| CCAAAGACTGAGAGTCGGAA+GGG | 0.589023 | 8_4:-12423758 | Msa1314040:CDS |
| TACCAGATCTTACCCTTCGA+GGG | 0.590224 | 8_4:+12423952 | None:intergenic |
| AGAGGATTATCATGCATGGA+TGG | 0.591887 | 8_4:-12423399 | Msa1314040:CDS |
| TCTTTAACATCTTTATTTGG+GGG | 0.594301 | 8_4:+12422769 | None:intergenic |
| GTCAATCCTGGTCCACTGGA+AGG | 0.594966 | 8_4:+12421315 | None:intergenic |
| TACCTTGGACAAAGAACTGA+AGG | 0.595384 | 8_4:-12421492 | Msa1314040:CDS |
| TGAGTTTAAGGAGCTCGCTA+AGG | 0.596693 | 8_4:-12421616 | Msa1314040:CDS |
| CCAGACAAAGAGGCTGACTT+GGG | 0.599209 | 8_4:-12424026 | Msa1314040:CDS |
| GAATGGGACACTGAAAAGAT+GGG | 0.599538 | 8_4:-12424456 | Msa1314040:CDS |
| ATCAGAAGACGCAGACCATG+TGG | 0.603390 | 8_4:+12421984 | None:intergenic |
| GACCAGGATTGACCGGTAGA+GGG | 0.605995 | 8_4:-12421305 | Msa1314040:CDS |
| TATATACCTGCAATCACTTG+TGG | 0.606191 | 8_4:+12423521 | None:intergenic |
| GAAGTTATTACCATCAGCCG+TGG | 0.608159 | 8_4:+12425977 | None:intergenic |
| TTGGGTCGTCCAGTTCTTGG+GGG | 0.609093 | 8_4:-12424008 | Msa1314040:CDS |
| TCCAAAGACTGAGAGTCGGA+AGG | 0.609862 | 8_4:-12423759 | Msa1314040:CDS |
| TTGGACAATATCAGTACGGA+GGG | 0.615349 | 8_4:-12421695 | Msa1314040:CDS |
| GAGTAGAGGATTATCATGCA+TGG | 0.615496 | 8_4:-12423403 | Msa1314040:intron |
| AAACTATCACCATTAGGATG+TGG | 0.615628 | 8_4:+12422817 | None:intergenic |
| AGATGGGAGCTCCATCCCCA+GGG | 0.620003 | 8_4:-12424440 | Msa1314040:CDS |
| ACTGTTGGGAATCCCTCTAC+CGG | 0.620513 | 8_4:+12421293 | None:intergenic |
| TGCTGAAGCAATCCATATGA+GGG | 0.621259 | 8_4:+12421737 | None:intergenic |
| TCATGCATGGATGGCTGATG+AGG | 0.623591 | 8_4:-12423390 | Msa1314040:CDS |
| CAGAAGACGCAGACCATGTG+GGG | 0.624840 | 8_4:+12421986 | None:intergenic |
| AAATATCTTGATCAATGCAG+AGG | 0.628743 | 8_4:-12422440 | Msa1314040:CDS |
| GAACTTGTAGAAGTGGGTCA+TGG | 0.630532 | 8_4:-12421825 | Msa1314040:CDS |
| TGAAAGCCACAGAACGACCC+GGG | 0.630611 | 8_4:+12426015 | None:intergenic |
| TTTGGAGACAATCACACCAA+AGG | 0.631480 | 8_4:-12421577 | Msa1314040:CDS |
| CATCAAGGGTCAAACTCACA+AGG | 0.634650 | 8_4:+12424379 | None:intergenic |
| AAACTTAGCTCAATGGCCAA+TGG | 0.637050 | 8_4:+12422841 | None:intergenic |
| AATATCTTGATCAATGCAGA+GGG | 0.638662 | 8_4:-12422439 | Msa1314040:CDS |
| TTTGGGTGAGCCAGACAAAG+AGG | 0.639737 | 8_4:-12424036 | Msa1314040:CDS |
| CTTGGAGCCAAACATGGATG+GGG | 0.651235 | 8_4:-12423116 | Msa1314040:CDS |
| GCGCATCTTCTTTACCAACA+AGG | 0.651998 | 8_4:-12424286 | Msa1314040:intron |
| TGACTTGAAGAATGCTAAGT+GGG | 0.656610 | 8_4:-12421802 | Msa1314040:CDS |
| TTTGGACAATATCAGTACGG+AGG | 0.658574 | 8_4:-12421696 | Msa1314040:CDS |
| CAGATCCAAAGACTGAGAGT+CGG | 0.662951 | 8_4:-12423763 | Msa1314040:CDS |
| TCAGAAGACGCAGACCATGT+GGG | 0.666280 | 8_4:+12421985 | None:intergenic |
| GTGACTTGAAGAATGCTAAG+TGG | 0.679804 | 8_4:-12421803 | Msa1314040:CDS |
| AGTGTTAGCTAAGAACAACA+AGG | 0.729550 | 8_4:-12426102 | Msa1314040:CDS |
| GATGGGAGCTCCATCCCCAG+GGG | 0.731834 | 8_4:-12424439 | Msa1314040:CDS |
| GTAAATTCAACAAAACATCG+AGG | 0.749212 | 8_4:-12423604 | Msa1314040:CDS |
| AATATGGATAGATTGCATCG+TGG | 0.790344 | 8_4:+12422944 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAATTAGTCATTTTTTT+AGG | - | chr8_4:12421843-12421862 | Msa1314040:CDS | 10.0% |
| !! | TAATAAGAATAGTTTAAAAA+AGG | + | chr8_4:12422075-12422094 | None:intergenic | 10.0% |
| !! | TTTAAACTATTCTTATTAAA+AGG | - | chr8_4:12422077-12422096 | Msa1314040:intron | 10.0% |
| !! | TTAAACTATTCTTATTAAAA+GGG | - | chr8_4:12422078-12422097 | Msa1314040:intron | 10.0% |
| !! | AAAAAATTTAGTTATTTGAT+TGG | - | chr8_4:12422183-12422202 | Msa1314040:intron | 10.0% |
| !! | AATAATCTTATAATTATGGA+CGG | + | chr8_4:12421476-12421495 | None:intergenic | 15.0% |
| !!! | AAAAATGACTAATTTTAAGT+GGG | + | chr8_4:12421841-12421860 | None:intergenic | 15.0% |
| !!! | AAAAAATGACTAATTTTAAG+TGG | + | chr8_4:12421842-12421861 | None:intergenic | 15.0% |
| !!! | TATCTTTAAATGAATAGTTT+TGG | - | chr8_4:12422364-12422383 | Msa1314040:CDS | 15.0% |
| !!! | ATATTCACAAATTTTAGATA+GGG | + | chr8_4:12422629-12422648 | None:intergenic | 15.0% |
| !! | ATTTAAATTAGTAGTATATC+TGG | - | chr8_4:12422797-12422816 | Msa1314040:CDS | 15.0% |
| !!! | TAAATTTTATTTTGTCTAAC+AGG | - | chr8_4:12424399-12424418 | Msa1314040:CDS | 15.0% |
| !! | TTATTATATCAAAATGATCT+AGG | + | chr8_4:12424748-12424767 | None:intergenic | 15.0% |
| !! | TTTGTTTGAAAAATATTGTA+TGG | - | chr8_4:12425002-12425021 | Msa1314040:intron | 15.0% |
| !!! | ATTAATGTCTTTTTAACAAA+TGG | + | chr8_4:12425133-12425152 | None:intergenic | 15.0% |
| !!! | TATGTAATTAGTTTGTTATT+TGG | + | chr8_4:12425213-12425232 | None:intergenic | 15.0% |
| !!! | AATACCCATGTTTTTTTTAA+AGG | - | chr8_4:12421635-12421654 | Msa1314040:CDS | 20.0% |
| !!! | TTGACCTTTAAAAAAAACAT+GGG | + | chr8_4:12421642-12421661 | None:intergenic | 20.0% |
| !!! | TTTGACCTTTAAAAAAAACA+TGG | + | chr8_4:12421643-12421662 | None:intergenic | 20.0% |
| !! | AATTTAGTTATTTGATTGGT+AGG | - | chr8_4:12422187-12422206 | Msa1314040:intron | 20.0% |
| !!! | TGGATTTTAACAGAATAAAA+AGG | - | chr8_4:12422244-12422263 | Msa1314040:intron | 20.0% |
| !!! | GATATTCACAAATTTTAGAT+AGG | + | chr8_4:12422630-12422649 | None:intergenic | 20.0% |
| !! | TTACTACTATCAACTTATTA+CGG | + | chr8_4:12422754-12422773 | None:intergenic | 20.0% |
| !! | CGTAATATTGAATTGAAATT+GGG | + | chr8_4:12422921-12422940 | None:intergenic | 20.0% |
| !! | ACGTAATATTGAATTGAAAT+TGG | + | chr8_4:12422922-12422941 | None:intergenic | 20.0% |
| !! | AATTCAATATTACGTTTGAA+TGG | - | chr8_4:12422927-12422946 | Msa1314040:CDS | 20.0% |
| !! | ATTCAATATTACGTTTGAAT+GGG | - | chr8_4:12422928-12422947 | Msa1314040:CDS | 20.0% |
| !! | TTAAATATATTGCGATAACT+TGG | + | chr8_4:12423920-12423939 | None:intergenic | 20.0% |
| !! | ATGTACAAAAGAAATAAAGA+AGG | - | chr8_4:12424112-12424131 | Msa1314040:CDS | 20.0% |
| !! | TATAATGCATACATAGTAAT+TGG | - | chr8_4:12424156-12424175 | Msa1314040:CDS | 20.0% |
| !! | AATAAATATAGAAAGCAATG+AGG | + | chr8_4:12424189-12424208 | None:intergenic | 20.0% |
| !!! | ATCTTTAACATCTTTATTTG+GGG | + | chr8_4:12424635-12424654 | None:intergenic | 20.0% |
| !!! | CATCTTTAACATCTTTATTT+GGG | + | chr8_4:12424636-12424655 | None:intergenic | 20.0% |
| !! | TCATCTTTAACATCTTTATT+TGG | + | chr8_4:12424637-12424656 | None:intergenic | 20.0% |
| !! | GAACTAAAAGTTTATGAATT+GGG | + | chr8_4:12424900-12424919 | None:intergenic | 20.0% |
| !!! | TTTAAGTTATTGATTCACTT+GGG | + | chr8_4:12425181-12425200 | None:intergenic | 20.0% |
| !!! | TTTTAAGTTATTGATTCACT+TGG | + | chr8_4:12425182-12425201 | None:intergenic | 20.0% |
| !! | AAAGAAATTGATTGAAATTG+AGG | - | chr8_4:12425982-12426001 | Msa1314040:intron | 20.0% |
| ! | TCTATACACAAATGACAATT+TGG | - | chr8_4:12421562-12421581 | Msa1314040:CDS | 25.0% |
| !!! | TTTGGACTTTTGAAACTTAA+AGG | + | chr8_4:12421710-12421729 | None:intergenic | 25.0% |
| !!! | AAAACTAAAAGGACTTGTTT+TGG | + | chr8_4:12421728-12421747 | None:intergenic | 25.0% |
| ! | GAAACGATTCAAAAACTAAA+AGG | + | chr8_4:12421739-12421758 | None:intergenic | 25.0% |
| !!! | ATTTTTTTAGGCATGACAAA+TGG | - | chr8_4:12421855-12421874 | Msa1314040:CDS | 25.0% |
| ! | AAACTTAAAATGACCACTTT+GGG | - | chr8_4:12422011-12422030 | Msa1314040:CDS | 25.0% |
| ! | AACTATTCTTATTAAAAGGG+AGG | - | chr8_4:12422081-12422100 | Msa1314040:intron | 25.0% |
| ! | ACTATTCTTATTAAAAGGGA+GGG | - | chr8_4:12422082-12422101 | Msa1314040:intron | 25.0% |
| !! | TAAACATTTTTATCTCATCC+AGG | + | chr8_4:12422270-12422289 | None:intergenic | 25.0% |
| ! | GTGAATATCTTTGTTGAAAT+AGG | - | chr8_4:12422641-12422660 | Msa1314040:intron | 25.0% |
| ! | TACTACTATCAACTTATTAC+GGG | + | chr8_4:12422753-12422772 | None:intergenic | 25.0% |
| !! | GATATTTTTCATTACCTTGT+TGG | + | chr8_4:12423131-12423150 | None:intergenic | 25.0% |
| ! | TCATAAGTAGAGTAAACATT+TGG | + | chr8_4:12423580-12423599 | None:intergenic | 25.0% |
| ! | TACTTAGTATATCAGTATCA+TGG | + | chr8_4:12423779-12423798 | None:intergenic | 25.0% |
| ! | AATCATATAAAGAAAGCTCA+TGG | - | chr8_4:12423950-12423969 | Msa1314040:CDS | 25.0% |
| !! | AATTTTGTTACTATGAGTAG+AGG | - | chr8_4:12423983-12424002 | Msa1314040:CDS | 25.0% |
| ! | TTGCTTTCTATATTTATTGC+AGG | - | chr8_4:12424191-12424210 | Msa1314040:intron | 25.0% |
| ! | AAGTTAGATAGTAAACTCTA+TGG | - | chr8_4:12424231-12424250 | Msa1314040:intron | 25.0% |
| !! | AACCATTCTTTTTGTTAAAG+AGG | - | chr8_4:12424522-12424541 | Msa1314040:CDS | 25.0% |
| ! | ATCCTCTTTAACAAAAAGAA+TGG | + | chr8_4:12424527-12424546 | None:intergenic | 25.0% |
| !! | ATTCTTTTTGTTAAAGAGGA+TGG | - | chr8_4:12424526-12424545 | Msa1314040:CDS | 25.0% |
| !! | TCTTTAACATCTTTATTTGG+GGG | + | chr8_4:12424634-12424653 | None:intergenic | 25.0% |
| ! | GGAACTAAAAGTTTATGAAT+TGG | + | chr8_4:12424901-12424920 | None:intergenic | 25.0% |
| ! | TACCTACTGATCTAAAAAAT+AGG | - | chr8_4:12425073-12425092 | Msa1314040:intron | 25.0% |
| !!! | TACCTATTTTTTAGATCAGT+AGG | + | chr8_4:12425078-12425097 | None:intergenic | 25.0% |
| ! | TATTGCAAAACATTACATCT+TGG | - | chr8_4:12425101-12425120 | Msa1314040:intron | 25.0% |
| !!! | TAGTTTGTTATTTGGTAGTT+AGG | + | chr8_4:12425205-12425224 | None:intergenic | 25.0% |
| ! | TAAAGATGTTAAAGATGATG+AGG | - | chr8_4:12425532-12425551 | Msa1314040:intron | 25.0% |
| !! | AATTTTGGACAATATCAGTA+CGG | - | chr8_4:12425701-12425720 | Msa1314040:intron | 25.0% |
| !!! | ATGAATCTTATGGTTTTAGT+TGG | + | chr8_4:12425746-12425765 | None:intergenic | 25.0% |
| ! | CATAGTATTCATAACTTCAA+GGG | + | chr8_4:12425855-12425874 | None:intergenic | 25.0% |
| !! | TTTCTTTGCAAACTTTTTGT+AGG | + | chr8_4:12425969-12425988 | None:intergenic | 25.0% |
| ATCTTATAATTATGGACGGA+TGG | + | chr8_4:12421472-12421491 | None:intergenic | 30.0% | |
| TGGGTATTAAAGAAAGTTGT+TGG | + | chr8_4:12421623-12421642 | None:intergenic | 30.0% | |
| TAAAGGTCAAATGCATCTAA+AGG | - | chr8_4:12421652-12421671 | Msa1314040:CDS | 30.0% | |
| !!! | GTTTTTAGTTTTTCCCAAAG+TGG | - | chr8_4:12421683-12421702 | Msa1314040:CDS | 30.0% |
| !! | ACTAATTTTAAGTGGGTGTT+AGG | + | chr8_4:12421834-12421853 | None:intergenic | 30.0% |
| ! | TTTCAAACAAGTCCTTTTAG+AGG | + | chr8_4:12421925-12421944 | None:intergenic | 30.0% |
| GAAACGATTCAAAAACGAAA+AGG | - | chr8_4:12421941-12421960 | Msa1314040:CDS | 30.0% | |
| ! | AAAAACGAAAAGGACTTGTT+TGG | - | chr8_4:12421951-12421970 | Msa1314040:CDS | 30.0% |
| ! | AAAACGAAAAGGACTTGTTT+GGG | - | chr8_4:12421952-12421971 | Msa1314040:CDS | 30.0% |
| !!! | TTGGGACTTTTGAAACTTAA+AGG | - | chr8_4:12421970-12421989 | Msa1314040:CDS | 30.0% |
| ! | TGAAACTTAAAGGACTTGTT+TGG | - | chr8_4:12421980-12421999 | Msa1314040:CDS | 30.0% |
| ! | GAAACTTAAAGGACTTGTTT+GGG | - | chr8_4:12421981-12422000 | Msa1314040:CDS | 30.0% |
| GAAACTTAAAATGACCACTT+TGG | - | chr8_4:12422010-12422029 | Msa1314040:CDS | 30.0% | |
| GGGAAAAACGAAAAACTTAA+AGG | - | chr8_4:12422031-12422050 | Msa1314040:intron | 30.0% | |
| AAAAGGTCAAATGCATCTAA+AGG | + | chr8_4:12422058-12422077 | None:intergenic | 30.0% | |
| TTTAACAGAATAAAAAGGCC+TGG | - | chr8_4:12422249-12422268 | Msa1314040:intron | 30.0% | |
| ! | TTTTAGATAGGGAGTTTCTA+CGG | + | chr8_4:12422618-12422637 | None:intergenic | 30.0% |
| ! | TGTTTTCTTCTCAAGAAAGT+AGG | - | chr8_4:12422670-12422689 | Msa1314040:intron | 30.0% |
| CCTATATTTAGAGATGAAAG+TGG | + | chr8_4:12422716-12422735 | None:intergenic | 30.0% | |
| CCACTTTCATCTCTAAATAT+AGG | - | chr8_4:12422713-12422732 | Msa1314040:CDS | 30.0% | |
| ACTACTATCAACTTATTACG+GGG | + | chr8_4:12422752-12422771 | None:intergenic | 30.0% | |
| !! | CTACTTTCTGAAATTTGTGT+AGG | - | chr8_4:12422833-12422852 | Msa1314040:CDS | 30.0% |
| ! | TCTGAAATTTGTGTAGGAAA+TGG | - | chr8_4:12422839-12422858 | Msa1314040:CDS | 30.0% |
| ATTTGTGTAGGAAATGGAAA+AGG | - | chr8_4:12422845-12422864 | Msa1314040:CDS | 30.0% | |
| TCTTGTCTATAGTAGACTAA+TGG | + | chr8_4:12423263-12423282 | None:intergenic | 30.0% | |
| TACGATGTCTACAATGATTT+GGG | - | chr8_4:12423347-12423366 | Msa1314040:CDS | 30.0% | |
| GTAAATTCAACAAAACATCG+AGG | - | chr8_4:12423796-12423815 | Msa1314040:intron | 30.0% | |
| !! | CACTGATTTAGCATTAATTG+GGG | + | chr8_4:12423835-12423854 | None:intergenic | 30.0% |
| !! | CCACTGATTTAGCATTAATT+GGG | + | chr8_4:12423836-12423855 | None:intergenic | 30.0% |
| !! | ATTTACCAGAAGTTTTTCGA+TGG | + | chr8_4:12424075-12424094 | None:intergenic | 30.0% |
| TTCAATCAATTGAACTACAC+AGG | - | chr8_4:12424375-12424394 | Msa1314040:CDS | 30.0% | |
| ATGCAATCTATCCATATTTG+AGG | - | chr8_4:12424461-12424480 | Msa1314040:CDS | 30.0% | |
| GCATTTACTTTCCTCAAATA+TGG | + | chr8_4:12424475-12424494 | None:intergenic | 30.0% | |
| AAGATGACGAACCTTTAATT+TGG | - | chr8_4:12424650-12424669 | Msa1314040:intron | 30.0% | |
| TATACATTTACTTGTGTCAC+AGG | - | chr8_4:12424809-12424828 | Msa1314040:intron | 30.0% | |
| AAATATCTTGATCAATGCAG+AGG | - | chr8_4:12424960-12424979 | Msa1314040:intron | 30.0% | |
| AATATCTTGATCAATGCAGA+GGG | - | chr8_4:12424961-12424980 | Msa1314040:intron | 30.0% | |
| GCAAAAAAAATATACGCAAG+GGG | + | chr8_4:12425333-12425352 | None:intergenic | 30.0% | |
| CGCAAAAAAAATATACGCAA+GGG | + | chr8_4:12425334-12425353 | None:intergenic | 30.0% | |
| ACGCAAAAAAAATATACGCA+AGG | + | chr8_4:12425335-12425354 | None:intergenic | 30.0% | |
| CTTTCTTGCTTATTATCTAG+AGG | - | chr8_4:12425368-12425387 | Msa1314040:intron | 30.0% | |
| !!! | ATCTTATGGTTTTAGTTGGT+CGG | + | chr8_4:12425742-12425761 | None:intergenic | 30.0% |
| GCATAGTATTCATAACTTCA+AGG | + | chr8_4:12425856-12425875 | None:intergenic | 30.0% | |
| TGAAGTTATGAATACTATGC+TGG | - | chr8_4:12425856-12425875 | Msa1314040:intron | 30.0% | |
| ATGATGAGTCATTGAAAAAC+CGG | - | chr8_4:12426026-12426045 | Msa1314040:CDS | 30.0% | |
| AGTGTTAGCTAAGAACAACA+AGG | - | chr8_4:12421298-12421317 | Msa1314040:CDS | 35.0% | |
| AACAAGGTCACAAAGCTTAA+GGG | - | chr8_4:12421314-12421333 | Msa1314040:CDS | 35.0% | |
| CAGATTGATTAGTGATTCCA+CGG | - | chr8_4:12421406-12421425 | Msa1314040:CDS | 35.0% | |
| GAAACTTAAAGGACCACTTT+GGG | + | chr8_4:12421699-12421718 | None:intergenic | 35.0% | |
| TGAAACTTAAAGGACCACTT+TGG | + | chr8_4:12421700-12421719 | None:intergenic | 35.0% | |
| CCAACTATGCTATCTACAAT+AGG | + | chr8_4:12421770-12421789 | None:intergenic | 35.0% | |
| CCTATTGTAGATAGCATAGT+TGG | - | chr8_4:12421767-12421786 | Msa1314040:CDS | 35.0% | |
| !! | TTTTTAGGCATGACAAATGG+TGG | - | chr8_4:12421858-12421877 | Msa1314040:CDS | 35.0% |
| !! | GTTTTTCGTTTTTCCCAAAG+TGG | + | chr8_4:12422027-12422046 | None:intergenic | 35.0% |
| ATTCTTATTAAAAGGGAGGG+AGG | - | chr8_4:12422085-12422104 | Msa1314040:intron | 35.0% | |
| TTCTTATTAAAAGGGAGGGA+GGG | - | chr8_4:12422086-12422105 | Msa1314040:intron | 35.0% | |
| ATCCAGTTCTCAAGGAAAAT+GGG | + | chr8_4:12422229-12422248 | None:intergenic | 35.0% | |
| AATCCAGTTCTCAAGGAAAA+TGG | + | chr8_4:12422230-12422249 | None:intergenic | 35.0% | |
| CTGTTAAAATCCAGTTCTCA+AGG | + | chr8_4:12422237-12422256 | None:intergenic | 35.0% | |
| AGGAAATGGAAAAGGAAAAG+TGG | - | chr8_4:12422853-12422872 | Msa1314040:CDS | 35.0% | |
| GGAAATGGAAAAGGAAAAGT+GGG | - | chr8_4:12422854-12422873 | Msa1314040:CDS | 35.0% | |
| !! | TTTGGGAAGTCTTATTACCT+CGG | - | chr8_4:12422889-12422908 | Msa1314040:CDS | 35.0% |
| ! | TCCAAGATTTGGAACATCAA+GGG | + | chr8_4:12423038-12423057 | None:intergenic | 35.0% |
| ! | TTCCAAGATTTGGAACATCA+AGG | + | chr8_4:12423039-12423058 | None:intergenic | 35.0% |
| !! | AAGTTGATGGTTCCAAGATT+TGG | + | chr8_4:12423049-12423068 | None:intergenic | 35.0% |
| TGAGTTGCAGATAAAGTTGA+TGG | + | chr8_4:12423062-12423081 | None:intergenic | 35.0% | |
| TCAACTTTATCTGCAACTCA+TGG | - | chr8_4:12423062-12423081 | Msa1314040:intron | 35.0% | |
| GAAGAGTTGAAGACTTTAAG+AGG | - | chr8_4:12423281-12423300 | Msa1314040:intron | 35.0% | |
| ! | TTGAAGACTTTAAGAGGAGA+TGG | - | chr8_4:12423287-12423306 | Msa1314040:intron | 35.0% |
| CTACGATGTCTACAATGATT+TGG | - | chr8_4:12423346-12423365 | Msa1314040:CDS | 35.0% | |
| AGAACCAAGTAAGAAAGGTA+AGG | - | chr8_4:12423472-12423491 | Msa1314040:intron | 35.0% | |
| !!! | CGACTATTATTTTGAGACAC+AGG | + | chr8_4:12423533-12423552 | None:intergenic | 35.0% |
| GTGTGAAGTAATTCATCTCT+TGG | + | chr8_4:12423681-12423700 | None:intergenic | 35.0% | |
| ATTAATTGGGGAAAGTTCGT+TGG | + | chr8_4:12423823-12423842 | None:intergenic | 35.0% | |
| CCCAATTAATGCTAAATCAG+TGG | - | chr8_4:12423833-12423852 | Msa1314040:intron | 35.0% | |
| !! | GCCACTGATTTAGCATTAAT+TGG | + | chr8_4:12423837-12423856 | None:intergenic | 35.0% |
| TATATACCTGCAATCACTTG+TGG | + | chr8_4:12423882-12423901 | None:intergenic | 35.0% | |
| !! | AGAAGTTTTTCGATGGCATT+CGG | + | chr8_4:12424068-12424087 | None:intergenic | 35.0% |
| !! | CTATCTAACTTGCTCTTTCT+TGG | + | chr8_4:12424222-12424241 | None:intergenic | 35.0% |
| CACAATAACCAAAGAACACT+TGG | - | chr8_4:12424266-12424285 | Msa1314040:intron | 35.0% | |
| AATATGGATAGATTGCATCG+TGG | + | chr8_4:12424459-12424478 | None:intergenic | 35.0% | |
| AAACTATCACCATTAGGATG+TGG | + | chr8_4:12424586-12424605 | None:intergenic | 35.0% | |
| ! | CATCCTAATGGTGATAGTTT+TGG | - | chr8_4:12424586-12424605 | Msa1314040:intron | 35.0% |
| GGCAAGTAAACATTACTAAC+AGG | + | chr8_4:12424613-12424632 | None:intergenic | 35.0% | |
| TTTGCAAGGAGCCAAATTAA+AGG | + | chr8_4:12424664-12424683 | None:intergenic | 35.0% | |
| !! | TTTAATTTGGCTCCTTGCAA+AGG | - | chr8_4:12424663-12424682 | Msa1314040:intron | 35.0% |
| ATCTAGGAAATTCTCACCAA+TGG | + | chr8_4:12424732-12424751 | None:intergenic | 35.0% | |
| ! | CTATTTGTTGCTATGACGAA+TGG | + | chr8_4:12424859-12424878 | None:intergenic | 35.0% |
| CATTCGTCATAGCAACAAAT+AGG | - | chr8_4:12424857-12424876 | Msa1314040:intron | 35.0% | |
| ATTTCGTGATCGTGCATTTA+TGG | + | chr8_4:12424944-12424963 | None:intergenic | 35.0% | |
| ! | AATGTCAGCTGTTGTTTACA+AGG | - | chr8_4:12425026-12425045 | Msa1314040:intron | 35.0% |
| ! | AGCTGTTGTTTACAAGGATT+GGG | - | chr8_4:12425032-12425051 | Msa1314040:intron | 35.0% |
| AAAAAAATATACGCAAGGGG+TGG | + | chr8_4:12425330-12425349 | None:intergenic | 35.0% | |
| TTGCTTATTATCTAGAGGAG+TGG | - | chr8_4:12425373-12425392 | Msa1314040:intron | 35.0% | |
| GATTATCCATATGCTGTTGA+TGG | - | chr8_4:12425443-12425462 | Msa1314040:intron | 35.0% | |
| !! | TGTTGATGGACTAGAGATAT+GGG | - | chr8_4:12425457-12425476 | Msa1314040:intron | 35.0% |
| TTGGAAAGAACTTGTAGAAG+TGG | - | chr8_4:12425568-12425587 | Msa1314040:intron | 35.0% | |
| TGGAAAGAACTTGTAGAAGT+GGG | - | chr8_4:12425569-12425588 | Msa1314040:intron | 35.0% | |
| TGACTTGAAGAATGCTAAGT+GGG | - | chr8_4:12425598-12425617 | Msa1314040:intron | 35.0% | |
| !! | GAATGCTAAGTGGGTTAAAA+TGG | - | chr8_4:12425607-12425626 | Msa1314040:intron | 35.0% |
| ! | CTTCATGCAGCTGTTAATTT+TGG | - | chr8_4:12425686-12425705 | Msa1314040:intron | 35.0% |
| TTTCTCTGGCATGAATCTTA+TGG | + | chr8_4:12425756-12425775 | None:intergenic | 35.0% | |
| ATAAGATTCATGCCAGAGAA+AGG | - | chr8_4:12425755-12425774 | Msa1314040:intron | 35.0% | |
| GGACTACATGAAGACATATT+TGG | - | chr8_4:12425805-12425824 | Msa1314040:intron | 35.0% | |
| AAAGAACTGAAGGTGATCTT+TGG | - | chr8_4:12425918-12425937 | Msa1314040:intron | 35.0% | |
| ! | AACTTTTTGTAGGCTTCTAC+TGG | + | chr8_4:12425959-12425978 | None:intergenic | 35.0% |
| TTGAGGAAGAGTTCATTCAA+AGG | - | chr8_4:12425999-12426018 | Msa1314040:CDS | 35.0% | |
| AGTCATTGAAAAACCGGTAT+GGG | - | chr8_4:12426032-12426051 | Msa1314040:CDS | 35.0% | |
| ! | GAAGGATAAAGAAGAGTGTA+TGG | + | chr8_4:12426070-12426089 | None:intergenic | 35.0% |
| CAACAAGGTCACAAAGCTTA+AGG | - | chr8_4:12421313-12421332 | Msa1314040:CDS | 40.0% | |
| TGCTTCCTTGAACTCATCTT+TGG | - | chr8_4:12421794-12421813 | Msa1314040:CDS | 40.0% | |
| TGGTACCAAAGATGAGTTCA+AGG | + | chr8_4:12421802-12421821 | None:intergenic | 40.0% | |
| CATCACCATCATCCTCTAAA+AGG | - | chr8_4:12421910-12421929 | Msa1314040:CDS | 40.0% | |
| !! | CAAGTCCTTTTAGAGGATGA+TGG | + | chr8_4:12421918-12421937 | None:intergenic | 40.0% |
| TTGAAATTGGGTTTCATCCG+AGG | + | chr8_4:12422909-12422928 | None:intergenic | 40.0% | |
| TGAATGGGACACTGAAAAGA+TGG | - | chr8_4:12422943-12422962 | Msa1314040:CDS | 40.0% | |
| GAATGGGACACTGAAAAGAT+GGG | - | chr8_4:12422944-12422963 | Msa1314040:CDS | 40.0% | |
| TCTCGATAAAAAAAGCCCCT+GGG | + | chr8_4:12422979-12422998 | None:intergenic | 40.0% | |
| TTCTCGATAAAAAAAGCCCC+TGG | + | chr8_4:12422980-12422999 | None:intergenic | 40.0% | |
| ACCCTTGATGTTCCAAATCT+TGG | - | chr8_4:12423034-12423053 | Msa1314040:intron | 40.0% | |
| CTATAGTAGACTAATGGAGC+TGG | + | chr8_4:12423257-12423276 | None:intergenic | 40.0% | |
| ! | GACTTTAAGAGGAGATGGAA+CGG | - | chr8_4:12423292-12423311 | Msa1314040:intron | 40.0% |
| ! | ACTTTAAGAGGAGATGGAAC+GGG | - | chr8_4:12423293-12423312 | Msa1314040:intron | 40.0% |
| GGTAGAGAACCAAGTAAGAA+AGG | - | chr8_4:12423467-12423486 | Msa1314040:intron | 40.0% | |
| ! | GTAGCCTTACCTTTCTTACT+TGG | + | chr8_4:12423479-12423498 | None:intergenic | 40.0% |
| CACAGGCAGTACAAAAATTG+AGG | + | chr8_4:12423516-12423535 | None:intergenic | 40.0% | |
| GAGTGACAACACATCTTGAA+AGG | + | chr8_4:12423739-12423758 | None:intergenic | 40.0% | |
| GAGTAGAGGATTATCATGCA+TGG | - | chr8_4:12423997-12424016 | Msa1314040:CDS | 40.0% | |
| AGAGGATTATCATGCATGGA+TGG | - | chr8_4:12424001-12424020 | Msa1314040:CDS | 40.0% | |
| TTTGCAAGACAGATGATTGC+TGG | - | chr8_4:12424035-12424054 | Msa1314040:CDS | 40.0% | |
| GAATGCCATCGAAAAACTTC+TGG | - | chr8_4:12424067-12424086 | Msa1314040:CDS | 40.0% | |
| GTGTTCTTTGGTTATTGTGC+TGG | + | chr8_4:12424265-12424284 | None:intergenic | 40.0% | |
| !! | AAGAATGGTTCTAGCAGCAT+AGG | + | chr8_4:12424512-12424531 | None:intergenic | 40.0% |
| GGATGGAACTTTGAATCCAT+TGG | - | chr8_4:12424543-12424562 | Msa1314040:CDS | 40.0% | |
| AAACTTAGCTCAATGGCCAA+TGG | + | chr8_4:12424562-12424581 | None:intergenic | 40.0% | |
| ATGTGGCAAACTTAGCTCAA+TGG | + | chr8_4:12424569-12424588 | None:intergenic | 40.0% | |
| CTAAGTTTGCCACATCCTAA+TGG | - | chr8_4:12424574-12424593 | Msa1314040:intron | 40.0% | |
| GGACCAAAACTATCACCATT+AGG | + | chr8_4:12424592-12424611 | None:intergenic | 40.0% | |
| !!! | CTTTTAGTTCCACACTATCG+TGG | - | chr8_4:12424910-12424929 | Msa1314040:intron | 40.0% |
| ! | CAGCTGTTGTTTACAAGGAT+TGG | - | chr8_4:12425031-12425050 | Msa1314040:intron | 40.0% |
| TCTAGTCCATCAACAGCATA+TGG | + | chr8_4:12425452-12425471 | None:intergenic | 40.0% | |
| !! | CTGTTGATGGACTAGAGATA+TGG | - | chr8_4:12425456-12425475 | Msa1314040:intron | 40.0% |
| !! | ATGAGGAACTCAGAGCATTT+TGG | - | chr8_4:12425549-12425568 | Msa1314040:intron | 40.0% |
| GTGACTTGAAGAATGCTAAG+TGG | - | chr8_4:12425597-12425616 | Msa1314040:intron | 40.0% | |
| TGCTGAAGCAATCCATATGA+GGG | + | chr8_4:12425666-12425685 | None:intergenic | 40.0% | |
| TTTGGACAATATCAGTACGG+AGG | - | chr8_4:12425704-12425723 | Msa1314040:intron | 40.0% | |
| TTGGACAATATCAGTACGGA+GGG | - | chr8_4:12425705-12425724 | Msa1314040:intron | 40.0% | |
| !!! | TGGTTTTAGTTGGTCGGTTA+AGG | + | chr8_4:12425736-12425755 | None:intergenic | 40.0% |
| GAAAGGATCCCATGAGTTTA+AGG | - | chr8_4:12425772-12425791 | Msa1314040:intron | 40.0% | |
| TTTGGAGACAATCACACCAA+AGG | - | chr8_4:12425823-12425842 | Msa1314040:intron | 40.0% | |
| ACTTCAAGGGTTTCAACCTT+TGG | + | chr8_4:12425842-12425861 | None:intergenic | 40.0% | |
| ATCCATGCATGATCCTAATG+AGG | - | chr8_4:12425883-12425902 | Msa1314040:intron | 40.0% | |
| TTCCTCATTAGGATCATGCA+TGG | + | chr8_4:12425888-12425907 | None:intergenic | 40.0% | |
| GATCCTAATGAGGAATACCT+TGG | - | chr8_4:12425893-12425912 | Msa1314040:intron | 40.0% | |
| ! | TGTCCAAGGTATTCCTCATT+AGG | + | chr8_4:12425899-12425918 | None:intergenic | 40.0% |
| TACCTTGGACAAAGAACTGA+AGG | - | chr8_4:12425908-12425927 | Msa1314040:intron | 40.0% | |
| GAGTCATTGAAAAACCGGTA+TGG | - | chr8_4:12426031-12426050 | Msa1314040:CDS | 40.0% | |
| AGAGTGTATGGAAACTTCAC+AGG | + | chr8_4:12426058-12426077 | None:intergenic | 40.0% | |
| ACTCTTCTTTATCCTTCCAG+TGG | - | chr8_4:12426073-12426092 | Msa1314040:CDS | 40.0% | |
| ATTAGTGATTCCACGGCTGA+TGG | - | chr8_4:12421413-12421432 | Msa1314040:CDS | 45.0% | |
| GAAGTTATTACCATCAGCCG+TGG | + | chr8_4:12421426-12421445 | None:intergenic | 45.0% | |
| TGGGTGTTAGGAGTCAGATT+TGG | + | chr8_4:12421822-12421841 | None:intergenic | 45.0% | |
| TTCTCAAGGAAAATGGGCAC+TGG | + | chr8_4:12422223-12422242 | None:intergenic | 45.0% | |
| ! | TGCCCATTTTCCTTGAGAAC+TGG | - | chr8_4:12422224-12422243 | Msa1314040:intron | 45.0% |
| AGTGGGAGAGCGAACATATT+TGG | - | chr8_4:12422871-12422890 | Msa1314040:CDS | 45.0% | |
| GTGGGAGAGCGAACATATTT+GGG | - | chr8_4:12422872-12422891 | Msa1314040:CDS | 45.0% | |
| ATAAAAAAAGCCCCTGGGGA+TGG | + | chr8_4:12422974-12422993 | None:intergenic | 45.0% | |
| CTCGATAAAAAAAGCCCCTG+GGG | + | chr8_4:12422978-12422997 | None:intergenic | 45.0% | |
| CATCAAGGGTCAAACTCACA+AGG | + | chr8_4:12423024-12423043 | None:intergenic | 45.0% | |
| GCGCATCTTCTTTACCAACA+AGG | - | chr8_4:12423114-12423133 | Msa1314040:CDS | 45.0% | |
| GAGCTGGTGTTTCACTTAGA+AGG | + | chr8_4:12423241-12423260 | None:intergenic | 45.0% | |
| ! | ACACTTTTCCTTACCCTCGA+AGG | - | chr8_4:12423435-12423454 | Msa1314040:intron | 45.0% |
| ! | CACTTTTCCTTACCCTCGAA+GGG | - | chr8_4:12423436-12423455 | Msa1314040:intron | 45.0% |
| TACCAGATCTTACCCTTCGA+GGG | + | chr8_4:12423451-12423470 | None:intergenic | 45.0% | |
| CAGATCCAAAGACTGAGAGT+CGG | - | chr8_4:12423637-12423656 | Msa1314040:CDS | 45.0% | |
| ! | GTTTGGCTCCAAGTGTTCTT+TGG | + | chr8_4:12424277-12424296 | None:intergenic | 45.0% |
| AGAACACTTGGAGCCAAACA+TGG | - | chr8_4:12424278-12424297 | Msa1314040:intron | 45.0% | |
| ACTTGGAGCCAAACATGGAT+GGG | - | chr8_4:12424283-12424302 | Msa1314040:intron | 45.0% | |
| CAACAGCATATGCCTTTGCA+AGG | + | chr8_4:12424678-12424697 | None:intergenic | 45.0% | |
| ! | GATTGGGTTTTCGCTGAAGA+AGG | - | chr8_4:12425048-12425067 | Msa1314040:intron | 45.0% |
| ! | TATGGGCTGCTATCAAGTCA+TGG | - | chr8_4:12425474-12425493 | Msa1314040:intron | 45.0% |
| ! | ATGGGCTGCTATCAAGTCAT+GGG | - | chr8_4:12425475-12425494 | Msa1314040:intron | 45.0% |
| GAACTTGTAGAAGTGGGTCA+TGG | - | chr8_4:12425575-12425594 | Msa1314040:intron | 45.0% | |
| ACTCTTGCACTACCCTCATA+TGG | - | chr8_4:12425651-12425670 | Msa1314040:intron | 45.0% | |
| GTGCTGAAGCAATCCATATG+AGG | + | chr8_4:12425667-12425686 | None:intergenic | 45.0% | |
| AACTCATGGGATCCTTTCTC+TGG | + | chr8_4:12425770-12425789 | None:intergenic | 45.0% | |
| AGCGAGCTCCTTAAACTCAT+GGG | + | chr8_4:12425783-12425802 | None:intergenic | 45.0% | |
| TAGCGAGCTCCTTAAACTCA+TGG | + | chr8_4:12425784-12425803 | None:intergenic | 45.0% | |
| TGAGTTTAAGGAGCTCGCTA+AGG | - | chr8_4:12425784-12425803 | Msa1314040:intron | 45.0% | |
| CACCTTCAGTTCTTTGTCCA+AGG | + | chr8_4:12425913-12425932 | None:intergenic | 45.0% | |
| !! | TATAAATAATCTTATAATTA+TGG | + | chr8_4:12421480-12421499 | None:intergenic | 5.0% |
| !! | TATAAGATTATTTATAAAAA+CGG | - | chr8_4:12421484-12421503 | Msa1314040:CDS | 5.0% |
| AACGGGTGAGCGCAAAGAAT+GGG | - | chr8_4:12423310-12423329 | Msa1314040:intron | 50.0% | |
| GTGAGCGCAAAGAATGGGAT+AGG | - | chr8_4:12423315-12423334 | Msa1314040:intron | 50.0% | |
| TTTGGGTGAGCCAGACAAAG+AGG | - | chr8_4:12423364-12423383 | Msa1314040:CDS | 50.0% | |
| ! | CCAGACAAAGAGGCTGACTT+GGG | - | chr8_4:12423374-12423393 | Msa1314040:CDS | 50.0% |
| ACTTGGGTCGTCCAGTTCTT+GGG | - | chr8_4:12423390-12423409 | Msa1314040:CDS | 50.0% | |
| TCTTGGGGGATCAAGCACTT+TGG | - | chr8_4:12423406-12423425 | Msa1314040:intron | 50.0% | |
| GATCTTACCCTTCGAGGGTA+AGG | + | chr8_4:12423446-12423465 | None:intergenic | 50.0% | |
| TACCCTCGAAGGGTAAGATC+TGG | - | chr8_4:12423446-12423465 | Msa1314040:intron | 50.0% | |
| CTACCAGATCTTACCCTTCG+AGG | + | chr8_4:12423452-12423471 | None:intergenic | 50.0% | |
| TCCAAAGACTGAGAGTCGGA+AGG | - | chr8_4:12423641-12423660 | Msa1314040:CDS | 50.0% | |
| CCAAAGACTGAGAGTCGGAA+GGG | - | chr8_4:12423642-12423661 | Msa1314040:CDS | 50.0% | |
| CCTGCAATCACTTGTGGTGT+TGG | + | chr8_4:12423876-12423895 | None:intergenic | 50.0% | |
| CCAACACCACAAGTGATTGC+AGG | - | chr8_4:12423873-12423892 | Msa1314040:intron | 50.0% | |
| TCATGCATGGATGGCTGATG+AGG | - | chr8_4:12424010-12424029 | Msa1314040:CDS | 50.0% | |
| CACTTGGAGCCAAACATGGA+TGG | - | chr8_4:12424282-12424301 | Msa1314040:intron | 50.0% | |
| CTTGGAGCCAAACATGGATG+GGG | - | chr8_4:12424284-12424303 | Msa1314040:intron | 50.0% | |
| ACTGTGACCCCATCCATGTT+TGG | + | chr8_4:12424294-12424313 | None:intergenic | 50.0% | |
| GGATGGGGTCACAGTAAAAG+AGG | - | chr8_4:12424299-12424318 | Msa1314040:CDS | 50.0% | |
| GACGATGATTCTTCCCCACA+TGG | - | chr8_4:12425401-12425420 | Msa1314040:intron | 50.0% | |
| TCAGAAGACGCAGACCATGT+GGG | + | chr8_4:12425418-12425437 | None:intergenic | 50.0% | |
| ATCAGAAGACGCAGACCATG+TGG | + | chr8_4:12425419-12425438 | None:intergenic | 50.0% | |
| TGGTCTGCGTCTTCTGATAG+AGG | - | chr8_4:12425421-12425440 | Msa1314040:intron | 50.0% | |
| !! | TTGTAGGCTTCTACTGGCTC+TGG | + | chr8_4:12425953-12425972 | None:intergenic | 50.0% |
| GAAACTTCACAGGCCCATAC+CGG | + | chr8_4:12426048-12426067 | None:intergenic | 50.0% | |
| CTTTATCCTTCCAGTGGACC+AGG | - | chr8_4:12426079-12426098 | Msa1314040:CDS | 50.0% | |
| ACTGTTGGGAATCCCTCTAC+CGG | + | chr8_4:12426110-12426129 | None:intergenic | 50.0% | |
| TGCTGCTGATCCTTCCATCC+CGG | - | chr8_4:12421367-12421386 | Msa1314040:CDS | 55.0% | |
| TGAAAGCCACAGAACGACCC+GGG | + | chr8_4:12421388-12421407 | None:intergenic | 55.0% | |
| CTGAAAGCCACAGAACGACC+CGG | + | chr8_4:12421389-12421408 | None:intergenic | 55.0% | |
| GAACGGGTGAGCGCAAAGAA+TGG | - | chr8_4:12423309-12423328 | Msa1314040:intron | 55.0% | |
| GCCAGACAAAGAGGCTGACT+TGG | - | chr8_4:12423373-12423392 | Msa1314040:CDS | 55.0% | |
| CCCAAGTCAGCCTCTTTGTC+TGG | + | chr8_4:12423377-12423396 | None:intergenic | 55.0% | |
| GACTTGGGTCGTCCAGTTCT+TGG | - | chr8_4:12423389-12423408 | Msa1314040:CDS | 55.0% | |
| CTTGGGTCGTCCAGTTCTTG+GGG | - | chr8_4:12423391-12423410 | Msa1314040:CDS | 55.0% | |
| TTGGGTCGTCCAGTTCTTGG+GGG | - | chr8_4:12423392-12423411 | Msa1314040:CDS | 55.0% | |
| GTGCTTGATCCCCCAAGAAC+TGG | + | chr8_4:12423404-12423423 | None:intergenic | 55.0% | |
| TGGGGGATCAAGCACTTTGG+AGG | - | chr8_4:12423409-12423428 | Msa1314040:intron | 55.0% | |
| GGGGGATCAAGCACTTTGGA+GGG | - | chr8_4:12423410-12423429 | Msa1314040:intron | 55.0% | |
| CCCTTCCGACTCTCAGTCTT+TGG | + | chr8_4:12423645-12423664 | None:intergenic | 55.0% | |
| GTCACCAACTCGTCAGCCAT+TGG | - | chr8_4:12424713-12424732 | Msa1314040:intron | 55.0% | |
| CTCACCAATGGCTGACGAGT+TGG | + | chr8_4:12424720-12424739 | None:intergenic | 55.0% | |
| GTCATCGTGCCACGATAGTG+TGG | + | chr8_4:12424922-12424941 | None:intergenic | 55.0% | |
| CAGAAGACGCAGACCATGTG+GGG | + | chr8_4:12425417-12425436 | None:intergenic | 55.0% | |
| GTCAATCCTGGTCCACTGGA+AGG | + | chr8_4:12426088-12426107 | None:intergenic | 55.0% | |
| TCCAGTGGACCAGGATTGAC+CGG | - | chr8_4:12426088-12426107 | Msa1314040:CDS | 55.0% | |
| GACCAGGATTGACCGGTAGA+GGG | - | chr8_4:12426095-12426114 | Msa1314040:CDS | 55.0% | |
| ATCCCTCTACCGGTCAATCC+TGG | + | chr8_4:12426100-12426119 | None:intergenic | 55.0% | |
| GCTGCTGATCCTTCCATCCC+GGG | - | chr8_4:12421368-12421387 | Msa1314040:CDS | 60.0% | |
| ACAGAACGACCCGGGATGGA+AGG | + | chr8_4:12421380-12421399 | None:intergenic | 60.0% | |
| TTCCATCCCGGGTCGTTCTG+TGG | - | chr8_4:12421379-12421398 | Msa1314040:CDS | 60.0% | |
| AAGATGGGAGCTCCATCCCC+AGG | - | chr8_4:12422959-12422978 | Msa1314040:CDS | 60.0% | |
| AGATGGGAGCTCCATCCCCA+GGG | - | chr8_4:12422960-12422979 | Msa1314040:CDS | 60.0% | |
| ACCGGTCAATCCTGGTCCAC+TGG | + | chr8_4:12426092-12426111 | None:intergenic | 60.0% | |
| GGACCAGGATTGACCGGTAG+AGG | - | chr8_4:12426094-12426113 | Msa1314040:CDS | 60.0% | |
| AGCCACAGAACGACCCGGGA+TGG | + | chr8_4:12421384-12421403 | None:intergenic | 65.0% | |
| GATGGGAGCTCCATCCCCAG+GGG | - | chr8_4:12422961-12422980 | Msa1314040:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 12421281 | 12426141 | 12421281 | ID=Msa1314040;Name=Msa1314040 |
| chr8_4 | mRNA | 12421281 | 12426141 | 12421281 | ID=Msa1314040-mRNA-1;Parent=Msa1314040;Name=Msa1314040-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0.12|0|1|1|1|9|0|823 |
| chr8_4 | exon | 12425988 | 12426141 | 12425988 | ID=Msa1314040-mRNA-1:exon:4685;Parent=Msa1314040-mRNA-1 |
| chr8_4 | exon | 12424287 | 12424567 | 12424287 | ID=Msa1314040-mRNA-1:exon:4684;Parent=Msa1314040-mRNA-1 |
| chr8_4 | exon | 12423934 | 12424189 | 12423934 | ID=Msa1314040-mRNA-1:exon:4683;Parent=Msa1314040-mRNA-1 |
| chr8_4 | exon | 12423528 | 12423782 | 12423528 | ID=Msa1314040-mRNA-1:exon:4682;Parent=Msa1314040-mRNA-1 |
| chr8_4 | exon | 12423334 | 12423419 | 12423334 | ID=Msa1314040-mRNA-1:exon:4681;Parent=Msa1314040-mRNA-1 |
| chr8_4 | exon | 12423102 | 12423209 | 12423102 | ID=Msa1314040-mRNA-1:exon:4680;Parent=Msa1314040-mRNA-1 |
| chr8_4 | exon | 12422688 | 12423001 | 12422688 | ID=Msa1314040-mRNA-1:exon:4679;Parent=Msa1314040-mRNA-1 |
| chr8_4 | exon | 12422328 | 12422591 | 12422328 | ID=Msa1314040-mRNA-1:exon:4678;Parent=Msa1314040-mRNA-1 |
| chr8_4 | exon | 12421281 | 12422034 | 12421281 | ID=Msa1314040-mRNA-1:exon:4677;Parent=Msa1314040-mRNA-1 |
| chr8_4 | CDS | 12425988 | 12426141 | 12425988 | ID=Msa1314040-mRNA-1:cds;Parent=Msa1314040-mRNA-1 |
| chr8_4 | CDS | 12424287 | 12424567 | 12424287 | ID=Msa1314040-mRNA-1:cds;Parent=Msa1314040-mRNA-1 |
| chr8_4 | CDS | 12423934 | 12424189 | 12423934 | ID=Msa1314040-mRNA-1:cds;Parent=Msa1314040-mRNA-1 |
| chr8_4 | CDS | 12423528 | 12423782 | 12423528 | ID=Msa1314040-mRNA-1:cds;Parent=Msa1314040-mRNA-1 |
| chr8_4 | CDS | 12423334 | 12423419 | 12423334 | ID=Msa1314040-mRNA-1:cds;Parent=Msa1314040-mRNA-1 |
| chr8_4 | CDS | 12423102 | 12423209 | 12423102 | ID=Msa1314040-mRNA-1:cds;Parent=Msa1314040-mRNA-1 |
| chr8_4 | CDS | 12422688 | 12423001 | 12422688 | ID=Msa1314040-mRNA-1:cds;Parent=Msa1314040-mRNA-1 |
| chr8_4 | CDS | 12422328 | 12422591 | 12422328 | ID=Msa1314040-mRNA-1:cds;Parent=Msa1314040-mRNA-1 |
| chr8_4 | CDS | 12421281 | 12422034 | 12421281 | ID=Msa1314040-mRNA-1:cds;Parent=Msa1314040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
