AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0496060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0496060 MtrunA17_Chr3g0090131 96.138 492 18 1 1 491 1 492 0.0 981
Msa0496060 MtrunA17_Chr3g0090111 86.789 492 61 3 1 491 1 489 0.0 890
Msa0496060 MtrunA17_Chr4g0043091 52.830 477 211 4 20 483 27 502 0.0 521
Msa0496060 MtrunA17_Chr4g0042171 50.313 479 223 5 19 483 22 499 8.47e-174 499
Msa0496060 MtrunA17_Chr6g0482131 51.037 482 217 6 18 483 33 511 3.00e-170 489
Msa0496060 MtrunA17_Chr2g0329191 49.372 478 228 5 19 483 32 508 2.02e-165 477
Msa0496060 MtrunA17_Chr6g0482941 49.689 483 207 7 21 482 43 510 2.25e-164 474
Msa0496060 MtrunA17_Chr6g0482951 49.275 483 209 7 21 482 43 510 7.95e-164 473
Msa0496060 MtrunA17_Chr2g0329201 49.163 478 230 4 19 483 29 506 1.45e-162 470
Msa0496060 MtrunA17_Chr4g0033271 48.109 476 234 4 21 483 35 510 4.35e-162 469
Msa0496060 MtrunA17_Chr4g0033321 50.105 475 224 4 21 482 33 507 9.30e-161 466
Msa0496060 MtrunA17_Chr4g0010501 48.240 483 219 7 20 483 23 493 1.14e-160 464
Msa0496060 MtrunA17_Chr4g0033311 48.954 478 227 7 21 483 39 514 2.77e-160 465
Msa0496060 MtrunA17_Chr6g0482071 48.950 476 230 4 21 483 37 512 2.92e-160 464
Msa0496060 MtrunA17_Chr4g0033331 48.643 479 227 6 20 482 38 513 4.00e-160 464
Msa0496060 MtrunA17_Chr6g0482081 49.170 482 227 6 18 483 33 512 4.22e-160 464
Msa0496060 MtrunA17_Chr4g0033201 46.778 481 237 6 19 483 34 511 4.91e-159 461
Msa0496060 MtrunA17_Chr4g0033401 49.580 476 227 4 20 482 33 508 5.45e-158 459
Msa0496060 MtrunA17_Chr3g0087261 45.963 483 248 5 14 485 30 510 2.16e-157 457
Msa0496060 MtrunA17_Chr4g0033341 48.211 475 235 5 20 483 68 542 4.42e-156 454
Msa0496060 MtrunA17_Chr3g0087271 46.105 475 243 5 22 485 39 511 1.28e-155 452
Msa0496060 MtrunA17_Chr4g0033261 48.093 472 222 6 18 483 38 492 1.93e-155 451
Msa0496060 MtrunA17_Chr3g0088441 47.071 478 238 6 20 483 37 513 5.44e-155 451
Msa0496060 MtrunA17_Chr2g0317841 46.888 482 240 5 19 487 30 508 5.21e-154 449
Msa0496060 MtrunA17_Chr4g0033231 47.458 472 225 6 18 483 38 492 3.67e-151 440
Msa0496060 MtrunA17_Chr4g0033191 45.361 485 246 6 20 488 42 523 1.53e-149 437
Msa0496060 MtrunA17_Chr2g0317821 46.680 482 241 5 19 487 30 508 2.39e-149 437
Msa0496060 MtrunA17_Chr2g0329321 45.816 478 220 6 19 483 36 487 6.55e-148 432
Msa0496060 MtrunA17_Chr2g0288021 45.102 490 240 7 18 487 32 512 5.81e-146 428
Msa0496060 MtrunA17_Chr4g0074561 44.885 479 234 6 26 482 40 510 1.22e-143 422
Msa0496060 MtrunA17_Chr5g0430451 47.119 486 207 8 21 483 39 497 1.42e-142 418
Msa0496060 MtrunA17_Chr4g0074551 45.661 484 236 6 19 483 48 523 3.77e-142 420
Msa0496060 MtrunA17_Chr4g0006111 44.813 482 235 7 20 487 64 528 5.33e-142 418
Msa0496060 MtrunA17_Chr2g0288071 46.555 479 228 6 24 482 70 540 1.04e-141 418
Msa0496060 MtrunA17_Chr4g0006971 43.368 475 246 7 22 484 28 491 1.58e-135 401
Msa0496060 MtrunA17_Chr7g0242681 42.558 477 246 8 21 483 38 500 2.56e-132 393
Msa0496060 MtrunA17_Chr4g0006131 43.396 477 240 8 20 483 41 500 3.26e-132 392
Msa0496060 MtrunA17_Chr7g0242691 42.316 475 251 6 21 483 31 494 1.67e-130 388
Msa0496060 MtrunA17_Chr1g0195611 41.909 482 245 11 19 483 25 488 9.95e-130 386
Msa0496060 MtrunA17_Chr5g0428831 42.558 477 244 10 22 483 28 489 1.08e-129 386
Msa0496060 MtrunA17_Chr5g0418871 50.904 332 150 4 42 361 4 334 1.71e-113 338
Msa0496060 MtrunA17_Chr7g0234091 41.578 469 253 8 22 482 76 531 5.14e-113 344
Msa0496060 MtrunA17_Chr7g0234111 40.512 469 258 8 22 482 76 531 2.62e-110 337
Msa0496060 MtrunA17_Chr7g0234131 38.806 469 267 7 22 482 76 532 1.57e-106 327
Msa0496060 MtrunA17_Chr1g0195641 42.857 385 198 8 23 394 29 404 3.96e-105 320
Msa0496060 MtrunA17_Chr2g0301231 42.289 402 203 6 94 483 7 391 1.24e-103 315
Msa0496060 MtrunA17_Chr3g0087201 45.482 332 159 6 165 482 19 342 6.55e-95 291
Msa0496060 MtrunA17_Chr7g0230651 37.766 376 218 6 60 429 11 376 1.90e-87 273
Msa0496060 MtrunA17_Chr7g0227561 38.491 265 134 3 23 283 48 287 1.40e-59 198
Msa0496060 MtrunA17_Chr3g0087191 55.705 149 64 2 16 162 17 165 5.08e-55 181
Msa0496060 MtrunA17_Chr7g0236731 41.818 220 123 2 114 328 34 253 2.32e-51 176
Msa0496060 MtrunA17_Chr4g0068871 26.492 419 237 12 80 485 175 535 7.24e-26 111
Msa0496060 MtrunA17_Chr5g0418861 46.667 90 47 1 394 482 1 90 2.92e-24 96.7
Msa0496060 MtrunA17_Chr8g0352881 56.364 55 24 0 28 82 5 59 5.41e-15 72.8
Msa0496060 MtrunA17_Chr8g0352881 37.500 88 55 0 235 322 57 144 1.13e-14 71.6
Msa0496060 MtrunA17_Chr7g0227591 43.103 58 33 0 429 486 12 69 6.31e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0496060 AT5G36890.1 70.551 472 136 3 23 491 18 489 0.0 715
Msa0496060 AT5G36890.2 70.276 471 137 3 23 491 18 487 0.0 711
Msa0496060 AT1G26560.1 51.572 477 216 6 20 482 31 506 1.63e-176 506
Msa0496060 AT3G18080.1 50.210 476 218 7 21 483 39 508 7.37e-167 481
Msa0496060 AT5G54570.1 48.643 479 230 6 19 482 28 505 4.01e-166 480
Msa0496060 AT3G18070.3 49.367 474 217 7 21 483 30 491 8.08e-165 475
Msa0496060 AT3G18070.1 49.578 474 222 7 21 483 30 497 7.66e-164 473
Msa0496060 AT2G44480.1 46.570 481 241 7 21 487 35 513 5.26e-157 456
Msa0496060 AT2G44480.3 46.570 481 241 7 21 487 66 544 1.62e-156 456
Msa0496060 AT3G60140.1 46.804 485 231 8 20 483 25 503 1.85e-156 457
Msa0496060 AT2G44450.1 48.340 482 229 7 20 487 30 505 1.53e-153 447
Msa0496060 AT5G44640.1 48.542 480 226 8 20 484 30 503 2.22e-152 444
Msa0496060 AT5G24550.1 46.875 480 237 7 21 483 32 510 2.23e-151 442
Msa0496060 AT5G42260.1 49.367 474 219 8 20 478 30 497 1.75e-150 439
Msa0496060 AT3G60130.1 45.585 487 243 9 18 489 27 506 4.14e-145 426
Msa0496060 AT2G44470.3 43.621 486 259 6 21 491 29 514 7.05e-145 428
Msa0496060 AT1G61820.1 45.455 484 249 6 18 487 27 509 2.09e-144 424
Msa0496060 AT5G24540.1 47.599 479 235 7 21 483 32 510 2.20e-143 422
Msa0496060 AT2G25630.1 46.653 478 217 9 20 482 29 483 1.76e-141 416
Msa0496060 AT1G02850.2 44.515 474 237 8 22 483 27 486 9.54e-141 414
Msa0496060 AT5G54570.3 46.244 426 214 5 18 429 27 451 1.46e-139 409
Msa0496060 AT1G61810.1 44.191 482 254 6 21 488 33 513 1.16e-136 404
Msa0496060 AT4G21760.2 44.776 469 241 5 26 482 59 521 6.31e-136 404
Msa0496060 AT1G02850.5 42.455 497 237 9 22 483 27 509 1.51e-135 402
Msa0496060 AT5G54570.2 47.537 406 198 5 91 482 4 408 5.72e-135 397
Msa0496060 AT1G51470.1 42.886 492 262 9 2 482 26 509 3.20e-134 398
Msa0496060 AT1G02850.4 42.369 498 237 10 22 483 27 510 8.05e-134 397
Msa0496060 AT1G47600.1 42.685 499 253 10 2 482 26 509 1.66e-133 396
Msa0496060 AT2G44460.1 45.322 481 246 8 23 488 31 509 2.38e-133 398
Msa0496060 AT4G27830.1 43.305 478 245 8 18 482 20 484 2.49e-133 395
Msa0496060 AT1G47600.2 42.485 499 253 11 2 482 26 508 3.26e-133 395
Msa0496060 AT3G60120.1 42.510 494 258 10 9 483 4 490 3.40e-132 394
Msa0496060 AT2G44480.2 44.660 412 215 5 88 487 1 411 2.06e-131 387
Msa0496060 AT1G61810.3 44.956 456 237 5 21 462 33 488 4.04e-131 391
Msa0496060 AT4G21760.1 44.136 469 234 6 26 482 59 511 6.37e-131 390
Msa0496060 AT2G32860.2 42.589 479 259 7 20 482 93 571 2.98e-130 391
Msa0496060 AT1G02850.1 42.405 474 220 9 22 483 27 459 6.93e-129 383
Msa0496060 AT2G32860.1 42.739 482 253 10 20 482 93 570 2.47e-128 386
Msa0496060 AT2G44490.1 41.443 485 253 11 23 483 16 493 2.75e-128 384
Msa0496060 AT1G45191.4 42.041 490 251 10 7 483 15 484 3.01e-127 380
Msa0496060 AT1G75940.1 43.354 489 248 10 22 486 38 521 3.28e-127 381
Msa0496060 AT3G62750.1 43.162 468 247 9 19 482 21 473 3.74e-127 379
Msa0496060 AT3G62750.2 43.162 468 247 9 19 482 47 499 6.01e-127 380
Msa0496060 AT4G22100.1 41.649 473 251 9 23 483 24 483 9.17e-127 379
Msa0496060 AT4G27820.1 42.857 483 240 9 18 483 20 483 2.66e-125 375
Msa0496060 AT3G21370.1 41.046 497 260 11 19 490 31 519 1.30e-124 374
Msa0496060 AT1G66280.1 41.770 486 258 8 20 486 35 514 1.95e-124 373
Msa0496060 AT1G45191.2 40.486 494 259 9 7 483 15 490 1.81e-123 370
Msa0496060 AT1G60090.2 39.959 483 263 8 13 483 16 483 2.58e-123 370
Msa0496060 AT5G25980.2 41.189 488 266 9 13 484 42 524 8.73e-123 370
Msa0496060 AT3G62740.1 41.649 473 252 9 19 482 21 478 9.20e-123 368
Msa0496060 AT1G45191.6 40.882 499 255 10 7 483 15 495 1.07e-122 369
Msa0496060 AT1G66270.1 41.975 486 257 9 20 486 35 514 5.63e-122 367
Msa0496060 AT1G45191.1 40.434 507 258 10 7 483 15 507 1.24e-121 366
Msa0496060 AT3G09260.1 40.947 486 263 9 20 486 34 514 7.86e-121 364
Msa0496060 AT5G28510.1 40.733 491 264 9 19 486 37 523 1.02e-120 364
Msa0496060 AT1G60090.1 39.549 488 265 8 13 483 16 490 1.31e-120 363
Msa0496060 AT1G52400.3 40.695 489 257 10 19 483 37 516 3.16e-119 360
Msa0496060 AT1G52400.1 40.695 489 257 10 19 483 37 516 3.16e-119 360
Msa0496060 AT1G66270.2 41.564 486 257 10 20 486 35 512 2.29e-118 358
Msa0496060 AT2G44470.1 42.180 422 230 5 21 428 29 450 8.11e-118 354
Msa0496060 AT3G60130.2 43.705 421 218 7 82 489 40 454 1.07e-117 354
Msa0496060 AT3G60140.2 45.269 391 194 6 20 393 25 412 5.18e-117 352
Msa0496060 AT5G26000.1 40.119 506 267 13 2 482 17 511 4.75e-116 352
Msa0496060 AT3G03640.1 40.541 481 263 11 23 483 36 513 5.56e-116 352
Msa0496060 AT5G24540.2 44.917 423 218 6 21 428 32 454 2.24e-114 345
Msa0496060 AT3G60130.3 42.993 421 210 9 82 489 40 443 2.15e-112 340
Msa0496060 AT3G18070.4 50.000 322 149 3 21 333 30 348 6.22e-112 336
Msa0496060 AT1G61810.5 43.066 411 220 5 91 488 4 413 3.32e-111 336
Msa0496060 AT1G02850.3 42.611 406 191 7 22 393 27 424 6.17e-109 330
Msa0496060 AT3G62750.4 42.548 416 221 8 19 431 47 447 5.60e-108 329
Msa0496060 AT3G62740.2 42.169 415 217 8 22 428 24 423 4.40e-106 323
Msa0496060 AT4G27830.2 41.912 408 212 7 88 482 1 396 9.02e-106 322
Msa0496060 AT2G44470.2 47.352 321 157 3 21 329 29 349 1.65e-105 320
Msa0496060 AT1G61810.4 44.186 387 202 5 21 393 33 419 2.45e-105 321
Msa0496060 AT5G25980.3 40.371 431 238 7 13 429 42 467 8.19e-105 321
Msa0496060 AT5G25980.1 40.371 431 238 7 13 429 42 467 8.19e-105 321
Msa0496060 AT3G18070.2 48.758 322 151 5 173 483 102 420 3.72e-102 313
Msa0496060 AT3G18070.2 44.737 76 42 0 21 96 30 105 7.02e-16 80.1
Msa0496060 AT2G44480.4 49.038 312 145 5 21 320 66 375 4.57e-101 309
Msa0496060 AT1G45191.5 46.084 332 165 3 7 329 15 341 3.48e-100 307
Msa0496060 AT1G45191.3 46.084 332 165 3 7 329 15 341 3.72e-100 307
Msa0496060 AT1G61820.3 43.207 368 195 5 133 487 4 370 3.84e-99 303
Msa0496060 AT3G62750.6 41.103 399 220 8 88 482 1 388 1.11e-98 303
Msa0496060 AT3G62750.5 41.103 399 220 8 88 482 1 388 1.11e-98 303
Msa0496060 AT5G26000.2 39.246 451 240 11 2 429 17 456 1.38e-98 305
Msa0496060 AT4G27820.2 41.162 413 211 8 88 483 1 398 9.29e-98 301
Msa0496060 AT4G27820.3 41.162 413 211 8 88 483 1 398 9.29e-98 301
Msa0496060 AT2G44450.2 42.897 359 189 4 140 487 1 354 2.09e-97 298
Msa0496060 AT3G62750.7 47.727 308 155 3 22 328 24 326 2.94e-96 296
Msa0496060 AT3G62750.8 47.727 308 155 3 22 328 24 326 2.94e-96 296
Msa0496060 AT1G60270.1 43.865 326 170 3 12 328 15 336 2.03e-95 294
Msa0496060 AT3G18070.7 47.588 311 149 5 184 483 1 308 2.07e-95 291
Msa0496060 AT3G62750.3 47.267 311 158 3 19 328 47 352 6.44e-95 295
Msa0496060 AT1G52400.2 38.337 433 235 9 19 428 37 460 2.84e-93 291
Msa0496060 AT2G44460.2 44.384 365 187 7 138 488 1 363 1.04e-88 278
Msa0496060 AT2G44480.5 42.157 306 165 4 193 487 3 307 1.91e-86 268
Msa0496060 AT5G48375.1 36.142 451 227 10 2 447 17 411 9.44e-85 268
Msa0496060 AT1G61810.2 47.794 272 132 2 21 282 33 304 3.40e-81 255
Msa0496060 AT1G51490.1 43.087 311 156 9 29 328 28 328 1.42e-72 236
Msa0496060 AT1G60270.2 42.800 250 133 2 88 328 1 249 4.00e-68 220
Msa0496060 AT3G18070.5 45.064 233 117 3 173 394 102 334 2.59e-63 209
Msa0496060 AT3G18070.5 44.737 76 42 0 21 96 30 105 3.24e-16 80.5
Msa0496060 AT3G18070.6 44.196 224 110 4 184 394 1 222 2.07e-56 188
Msa0496060 AT5G16580.1 35.417 288 160 7 164 439 26 299 1.98e-51 177
Msa0496060 AT3G06510.2 26.389 432 257 13 83 491 159 552 1.41e-27 117
Msa0496060 AT3G06510.1 26.730 419 238 14 83 491 159 518 2.53e-27 116

Find 117 sgRNAs with CRISPR-Local

Find 420 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATCCTCCTCCGAGAATT+TGG 0.134106 3_4:-26251801 None:intergenic
ATCAATGCTCTTCTTGAAAA+AGG 0.186679 3_4:+26250497 Msa0496060:CDS
CTTGTACTTGCTTCGGTAAA+TGG 0.219549 3_4:-26251089 None:intergenic
GAAGAATTTCTGAGAGAAAA+TGG 0.220328 3_4:+26247446 Msa0496060:CDS
GATACTTGCTTTGCAAGTTT+TGG 0.249512 3_4:+26250908 Msa0496060:CDS
ACCTCGTTGTATAGTGATTT+AGG 0.261744 3_4:-26251856 None:intergenic
TTGAATTCTTTGGACTTCAT+TGG 0.280186 3_4:+26251833 Msa0496060:CDS
TTCTTGCATCCACTATATTA+TGG 0.285971 3_4:+26251734 Msa0496060:CDS
AGTCGCCACTTCTGCTTATC+AGG 0.289635 3_4:+26247532 Msa0496060:CDS
ACACTTTGCATGGTCATTAC+TGG 0.300766 3_4:+26254008 Msa0496060:CDS
TCTTCAATCTTATCAGAGTT+TGG 0.311629 3_4:-26251371 None:intergenic
TAAAATAGAAGCATATTAAA+AGG 0.322456 3_4:-26254358 None:intergenic
GGTAAGACAAATATAAATAA+TGG 0.331132 3_4:-26254337 None:intergenic
GTGGCTATATGTTGTTCCTT+GGG 0.339471 3_4:+26252179 Msa0496060:CDS
GTGGTAGAGGTCCTAGTATA+TGG 0.341211 3_4:+26247969 Msa0496060:CDS
TGATGATGTGCTGCTAAGTA+TGG 0.341542 3_4:-26251040 None:intergenic
TATCCCTTCAGCATTGATAT+TGG 0.352706 3_4:-26250456 None:intergenic
TCATCTAGCATCTCATTTAG+TGG 0.371886 3_4:-26252988 None:intergenic
TTCCCTTCTGACTTCATCTT+CGG 0.378844 3_4:+26247509 Msa0496060:CDS
AGTGGCTATATGTTGTTCCT+TGG 0.380075 3_4:+26252178 Msa0496060:CDS
CCATTCTCGGTGACATATAT+CGG 0.385270 3_4:-26252246 None:intergenic
CGCAGAAGACTTTGGGTGCC+TGG 0.387348 3_4:-26254103 None:intergenic
CAAGGTTATACCAAACGTTT+CGG 0.394401 3_4:+26254048 Msa0496060:CDS
CTTTGACCTTGTACTTGCTT+CGG 0.397170 3_4:-26251096 None:intergenic
TGATCATTATCATCGTTATA+AGG 0.400828 3_4:+26248131 Msa0496060:CDS
TTATCCTCCTCCGAGAATTT+GGG 0.401648 3_4:-26251800 None:intergenic
ACCCAAAGTCTTCTGCGTAT+TGG 0.406488 3_4:+26254109 Msa0496060:CDS
ACCAATACGCAGAAGACTTT+GGG 0.411776 3_4:-26254110 None:intergenic
ATGTTGTTCCTTGGGGTCTT+CGG 0.421588 3_4:+26252187 Msa0496060:CDS
AGAAAGTCACATACCATTCT+CGG 0.427765 3_4:-26252259 None:intergenic
ACCCACCAACTGCGGTTTGA+AGG 0.428874 3_4:-26250967 None:intergenic
CCGATATATGTCACCGAGAA+TGG 0.434496 3_4:+26252246 Msa0496060:CDS
GGCTGGTGGTAGACTCTGAA+TGG 0.442641 3_4:+26251342 Msa0496060:CDS
GCACAACAGCTGGACAGAAT+TGG 0.456329 3_4:+26251926 Msa0496060:CDS
GCTAGCAAGGAGGGTGGTAG+AGG 0.457690 3_4:+26247956 Msa0496060:CDS
AACCAATACGCAGAAGACTT+TGG 0.457762 3_4:-26254111 None:intergenic
AGTCGTTCACGCATAACTTC+AGG 0.457789 3_4:-26251764 None:intergenic
GTTGATCTTATAGCCAAGTT+GGG 0.459389 3_4:+26248535 Msa0496060:CDS
ACCACTTGAGCTCAGTTGCT+TGG 0.463352 3_4:-26254382 None:intergenic
CCCCTTCAAACCGCAGTTGG+TGG 0.465082 3_4:+26250965 Msa0496060:CDS
CTTGTCGTAATGACATTCTT+CGG 0.465885 3_4:-26251903 None:intergenic
AGCAGCACATCATCAAATCT+TGG 0.471284 3_4:+26251048 Msa0496060:CDS
AGACCGACTTCCCAAATTCT+CGG 0.471407 3_4:+26251790 Msa0496060:CDS
TGTTGATCTTATAGCCAAGT+TGG 0.473875 3_4:+26248534 Msa0496060:CDS
TGGGAAGGCGGGGAGCTCAT+TGG 0.475634 3_4:+26252035 Msa0496060:CDS
ACTGCATCTTGATGAGTCAA+TGG 0.476677 3_4:+26250642 Msa0496060:CDS
TTTCGCGGTTTCTTAAAGAT+GGG 0.480453 3_4:+26254133 Msa0496060:CDS
TTACGACAAGGCACAACAGC+TGG 0.483666 3_4:+26251916 Msa0496060:CDS
CATTTACCGAAGCAAGTACA+AGG 0.483784 3_4:+26251090 Msa0496060:CDS
ATAGACCAATCCGAAACGTT+TGG 0.490953 3_4:-26254058 None:intergenic
GCATAGGCATCCCATATACT+AGG 0.491716 3_4:-26247980 None:intergenic
CCCACCAACTGCGGTTTGAA+GGG 0.498031 3_4:-26250966 None:intergenic
TTTATCGGTGTAGATGGCTT+AGG 0.500128 3_4:+26250431 Msa0496060:intron
ACCAGCCAAGACGAAAATCT+AGG 0.501744 3_4:-26251415 None:intergenic
TCTTAAAGATGGGGCAAACA+AGG 0.510413 3_4:+26254143 Msa0496060:CDS
AATGGAAACAGCTGCTGCAT+GGG 0.515763 3_4:-26251071 None:intergenic
CACAGTTGAATGGGAAGGCG+GGG 0.517438 3_4:+26252025 Msa0496060:intron
CAATGGTACAAAGTTACAAA+AGG 0.518258 3_4:-26250610 None:intergenic
CTGCATCTTGATGAGTCAAT+GGG 0.519946 3_4:+26250643 Msa0496060:CDS
TTAGATAGAAGGTGCTAGCA+AGG 0.520823 3_4:+26247943 Msa0496060:intron
GGATAGTCTCCATAATATAG+TGG 0.522297 3_4:-26251743 None:intergenic
GAAGTTATGCGTGAACGACT+TGG 0.522922 3_4:+26251767 Msa0496060:CDS
TCACAGTTGAATGGGAAGGC+GGG 0.530118 3_4:+26252024 Msa0496060:intron
CCCTTCAAACCGCAGTTGGT+GGG 0.530206 3_4:+26250966 Msa0496060:CDS
GTATTTGGTAAGACACATAA+TGG 0.534050 3_4:-26254190 None:intergenic
AAATGGAAACAGCTGCTGCA+TGG 0.536683 3_4:-26251072 None:intergenic
TTATACCAAACGTTTCGGAT+TGG 0.536707 3_4:+26254053 Msa0496060:CDS
ACCAAGCAACTGAGCTCAAG+TGG 0.539428 3_4:+26254381 Msa0496060:three_prime_UTR
GCTGGTGGTAGACTCTGAAT+GGG 0.542625 3_4:+26251343 Msa0496060:CDS
TGGTAGAGGTCCTAGTATAT+GGG 0.543561 3_4:+26247970 Msa0496060:CDS
GATGCTGGAGTTAATGCTCC+TGG 0.547337 3_4:+26250992 Msa0496060:CDS
ATTACTGGACAACTTCGAAT+GGG 0.548009 3_4:+26254023 Msa0496060:CDS
GGAACCAATATCAATGCTGA+AGG 0.551341 3_4:+26250452 Msa0496060:CDS
CATTACTGGACAACTTCGAA+TGG 0.554051 3_4:+26254022 Msa0496060:CDS
GCAGTTGGTGGGTATGATGC+TGG 0.554523 3_4:+26250977 Msa0496060:CDS
ATAGAAGGTGCTAGCAAGGA+GGG 0.555918 3_4:+26247947 Msa0496060:CDS
CGGGGAGCTCATTGGTGAGA+AGG 0.559264 3_4:+26252043 Msa0496060:CDS
TGGCTATATGTTGTTCCTTG+GGG 0.561938 3_4:+26252180 Msa0496060:CDS
CTGCGAGTTCGCTATTACAA+GGG 0.562943 3_4:+26253015 Msa0496060:CDS
ACTGCGAGTTCGCTATTACA+AGG 0.565427 3_4:+26253014 Msa0496060:CDS
ATCTAGGTGTCTCGCAGCAG+CGG 0.565847 3_4:-26251399 None:intergenic
CCTCCGAGAATTTGGGAAGT+CGG 0.566416 3_4:-26251793 None:intergenic
ATGCTTTGTATAAACTAGAG+TGG 0.575330 3_4:+26254257 Msa0496060:three_prime_UTR
TTCACAGTTGAATGGGAAGG+CGG 0.576115 3_4:+26252023 Msa0496060:intron
TTCGCGGTTTCTTAAAGATG+GGG 0.576695 3_4:+26254134 Msa0496060:CDS
GACAACTTCGAATGGGCTCA+AGG 0.583519 3_4:+26254030 Msa0496060:CDS
ACTCCGAAGATGAAGTCAGA+AGG 0.587435 3_4:-26247512 None:intergenic
GTACGCGTTGAAACCCAACT+TGG 0.588904 3_4:-26248548 None:intergenic
ATATCTTGCATCACTTGCGC+AGG 0.589670 3_4:+26253038 Msa0496060:CDS
CTTAAAGATGGGGCAAACAA+GGG 0.591688 3_4:+26254144 Msa0496060:CDS
GATGCCTATGCTTATACTGA+AGG 0.593156 3_4:+26247992 Msa0496060:CDS
GAGCCCCTTCAAACCGCAGT+TGG 0.595137 3_4:+26250962 Msa0496060:CDS
ACTTCCCAAATTCTCGGAGG+AGG 0.598018 3_4:+26251796 Msa0496060:CDS
CCACCAACTGCGGTTTGAAG+GGG 0.600742 3_4:-26250965 None:intergenic
AAAATACTCGACAAAAGCAA+TGG 0.611643 3_4:+26248096 Msa0496060:CDS
ATTGACTCATCAAGATGCAG+TGG 0.618454 3_4:-26250640 None:intergenic
TGATGTTCCAGGATAAGCAA+GGG 0.620122 3_4:+26251309 Msa0496060:intron
AGGAACCTGATAAGCAGAAG+TGG 0.620614 3_4:-26247537 None:intergenic
CTCCGAAGATGAAGTCAGAA+GGG 0.621176 3_4:-26247511 None:intergenic
AGGGATGGAGCTGATGTGAG+AGG 0.625962 3_4:+26253985 Msa0496060:intron
CATACCTTCAGTATAAGCAT+AGG 0.630354 3_4:-26247996 None:intergenic
TTGATGTTCCAGGATAAGCA+AGG 0.633558 3_4:+26251308 Msa0496060:intron
ATGTGAGAGGACACTTTGCA+TGG 0.634153 3_4:+26253998 Msa0496060:CDS
ATAATCTTCCGAAGACCCCA+AGG 0.634887 3_4:-26252195 None:intergenic
TTGATGAGTCAATGGGAGGA+TGG 0.652779 3_4:+26250650 Msa0496060:CDS
GAACCAATATCAATGCTGAA+GGG 0.653116 3_4:+26250453 Msa0496060:CDS
CGAAGAATGTCATTACGACA+AGG 0.654678 3_4:+26251904 Msa0496060:CDS
GATAGAAGGTGCTAGCAAGG+AGG 0.656517 3_4:+26247946 Msa0496060:intron
GATGTTCCAGGATAAGCAAG+GGG 0.676059 3_4:+26251310 Msa0496060:intron
GAAGGTGCTAGCAAGGAGGG+TGG 0.683982 3_4:+26247950 Msa0496060:CDS
AGCATCATACCCACCAACTG+CGG 0.685967 3_4:-26250975 None:intergenic
CATCTTGATGAGTCAATGGG+AGG 0.710481 3_4:+26250646 Msa0496060:CDS
TATAACAGGCAGCATCAGAG+TGG 0.713683 3_4:+26252160 Msa0496060:intron
GATGCAGTGGAAGATCCCAA+TGG 0.714924 3_4:-26250627 None:intergenic
CCGACTTCCCAAATTCTCGG+AGG 0.756560 3_4:+26251793 Msa0496060:CDS
ATGTTCCAGGATAAGCAAGG+GGG 0.760256 3_4:+26251311 Msa0496060:intron
GCCTAAATCACTATACAACG+AGG 0.773876 3_4:+26251855 Msa0496060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAATTTCACAAAATTAT+AGG - chr3_4:26247747-26247766 None:intergenic 10.0%
!! AAATAACAAAAATATAAAAC+AGG - chr3_4:26249543-26249562 None:intergenic 10.0%
!! ACTTCTTAAATTAATATATT+TGG + chr3_4:26250340-26250359 Msa0496060:intron 10.0%
!! TAAAATAATACAGATGTAAA+AGG + chr3_4:26248931-26248950 Msa0496060:intron 15.0%
!! AAAATAATACAGATGTAAAA+GGG + chr3_4:26248932-26248951 Msa0496060:intron 15.0%
!! TTAAGAAATTTCAATTACTT+TGG + chr3_4:26248976-26248995 Msa0496060:intron 15.0%
!!! AACTTTAAAGAAAAAAGAAA+AGG + chr3_4:26249729-26249748 Msa0496060:intron 15.0%
!! TAAATTAGCAAGAAATTAAA+AGG - chr3_4:26250270-26250289 None:intergenic 15.0%
!!! TTTATTTTATTGTATTGCAA+TGG + chr3_4:26250408-26250427 Msa0496060:intron 15.0%
!!! CTATCTATTTAATTTGTTAT+AGG + chr3_4:26250743-26250762 Msa0496060:intron 15.0%
!! AAAATAAATGTAATCTAACA+AGG - chr3_4:26251138-26251157 None:intergenic 15.0%
!! TATAAAACAAATGTATGTAT+AGG - chr3_4:26251445-26251464 None:intergenic 15.0%
!!! AAAATTTCTTTTGAATTCTT+TGG + chr3_4:26251823-26251842 Msa0496060:CDS 15.0%
!! TATATTAATAAACGATAGAA+GGG - chr3_4:26252569-26252588 None:intergenic 15.0%
!!! CGTTAATTTGAAAAATAAAT+AGG - chr3_4:26253118-26253137 None:intergenic 15.0%
!! TAATATAAAAACGAAGTATA+TGG + chr3_4:26253496-26253515 Msa0496060:intron 15.0%
!!! TATAAATAATGGAGTTTTAA+AGG - chr3_4:26254329-26254348 None:intergenic 15.0%
!!! TAAAATAGAAGCATATTAAA+AGG - chr3_4:26254361-26254380 None:intergenic 15.0%
!! ATGTTATATCAATGTATCTT+TGG - chr3_4:26247637-26247656 None:intergenic 20.0%
!!! CTTATAAATGACTTCATTTT+TGG + chr3_4:26247780-26247799 Msa0496060:intron 20.0%
!!! AACTAATCTTTGTTTTTAAC+CGG + chr3_4:26247892-26247911 Msa0496060:intron 20.0%
!! AATTTGTGAAATAGGATAAA+GGG - chr3_4:26248755-26248774 None:intergenic 20.0%
!! TTCAAATACCTAAATAGATT+AGG + chr3_4:26248894-26248913 Msa0496060:intron 20.0%
!! TGATAAATTTCCCAATTTAT+GGG - chr3_4:26249030-26249049 None:intergenic 20.0%
!! TTGATAAATTTCCCAATTTA+TGG - chr3_4:26249031-26249050 None:intergenic 20.0%
!!! AAAAATAAAAAGTGTCCTTT+CGG - chr3_4:26249168-26249187 None:intergenic 20.0%
!! GTTCAAATTAATAAATCACA+CGG - chr3_4:26249206-26249225 None:intergenic 20.0%
!!! GTGTGATTTATTAATTTGAA+CGG + chr3_4:26249205-26249224 Msa0496060:intron 20.0%
!! AACACTGAAATATATAAAGA+AGG - chr3_4:26249285-26249304 None:intergenic 20.0%
!! ATTTGAATGATTTAAGTAGA+GGG - chr3_4:26250133-26250152 None:intergenic 20.0%
!! TATTTGAATGATTTAAGTAG+AGG - chr3_4:26250134-26250153 None:intergenic 20.0%
!! AATGAGTAACTTAGTTTATA+TGG - chr3_4:26250574-26250593 None:intergenic 20.0%
!! GTTGAATAAAAAAATCATGT+AGG + chr3_4:26250672-26250691 Msa0496060:intron 20.0%
!! AACATGTTTAGTAGAAAATT+TGG - chr3_4:26250778-26250797 None:intergenic 20.0%
!! ATATTAATAAACGATAGAAG+GGG - chr3_4:26252568-26252587 None:intergenic 20.0%
!! GTATATTAATAAACGATAGA+AGG - chr3_4:26252570-26252589 None:intergenic 20.0%
!!! TTCAATGTTTTTAAGCAAAT+AGG - chr3_4:26253714-26253733 None:intergenic 20.0%
!! AGAAGAGGATAAAAAAATTA+AGG + chr3_4:26253811-26253830 Msa0496060:intron 20.0%
!! GAAGAGGATAAAAAAATTAA+GGG + chr3_4:26253812-26253831 Msa0496060:intron 20.0%
!! CAAATGATATACAAAACTTT+AGG - chr3_4:26253958-26253977 None:intergenic 20.0%
!!! CATTATTTTCTAGTAGTATT+TGG - chr3_4:26254208-26254227 None:intergenic 20.0%
!! GGTAAGACAAATATAAATAA+TGG - chr3_4:26254340-26254359 None:intergenic 20.0%
!!! CATTTGTCTTTTTGATGATT+TGG + chr3_4:26247577-26247596 Msa0496060:intron 25.0%
! TACAAAAAAATACACATGAG+TGG + chr3_4:26247821-26247840 Msa0496060:intron 25.0%
!!! ATTAGTTTTGCCATCTAAAA+AGG - chr3_4:26247879-26247898 None:intergenic 25.0%
! ATAGTAAGTAATAAGGATCA+AGG - chr3_4:26248055-26248074 None:intergenic 25.0%
! CAAGCAAATAGTAAGTAATA+AGG - chr3_4:26248062-26248081 None:intergenic 25.0%
!!! TTACTATTTGCTTGTTGTTT+TGG + chr3_4:26248068-26248087 Msa0496060:intron 25.0%
! TGATCATTATCATCGTTATA+AGG + chr3_4:26248131-26248150 Msa0496060:CDS 25.0%
! AATTGGCATACACAATATTT+AGG - chr3_4:26248177-26248196 None:intergenic 25.0%
! TTTCTAAACCAAAATCAATC+TGG - chr3_4:26248307-26248326 None:intergenic 25.0%
! TCAAAAATAGACTCAATATG+GGG - chr3_4:26248379-26248398 None:intergenic 25.0%
! CTCAAAAATAGACTCAATAT+GGG - chr3_4:26248380-26248399 None:intergenic 25.0%
! CTTAATGTAACTATGTGAAT+AGG + chr3_4:26248507-26248526 Msa0496060:intron 25.0%
! ATCACTAATAAAACATACCA+GGG - chr3_4:26248603-26248622 None:intergenic 25.0%
! CGTTAGATTAATTAGTTGAA+TGG - chr3_4:26248707-26248726 None:intergenic 25.0%
! GAATTTGTGAAATAGGATAA+AGG - chr3_4:26248756-26248775 None:intergenic 25.0%
! ACATGTTAGTGATTATATCA+GGG - chr3_4:26248795-26248814 None:intergenic 25.0%
! AACATGTTAGTGATTATATC+AGG - chr3_4:26248796-26248815 None:intergenic 25.0%
!! TGTTTACCAATCGATTTAAA+AGG - chr3_4:26248844-26248863 None:intergenic 25.0%
! AGTATAATGATCCCATAAAT+TGG + chr3_4:26249016-26249035 Msa0496060:intron 25.0%
! GTATAATGATCCCATAAATT+GGG + chr3_4:26249017-26249036 Msa0496060:intron 25.0%
! AAGATCTGTATTGCAATAAT+TGG - chr3_4:26249132-26249151 None:intergenic 25.0%
! AAATATATAAAGAAGGAGTC+AGG - chr3_4:26249278-26249297 None:intergenic 25.0%
!! TTGATAAACTTTTAGGCTTA+AGG - chr3_4:26249336-26249355 None:intergenic 25.0%
! TAGTTAATATTTGCCTCTTA+TGG + chr3_4:26249382-26249401 Msa0496060:intron 25.0%
! TGTTTACAACAGTTGATTAA+AGG + chr3_4:26249417-26249436 Msa0496060:intron 25.0%
!! GTGTAAATTAAGTCTTATCT+GGG + chr3_4:26249439-26249458 Msa0496060:intron 25.0%
!!! AGTGCAATTTTTCGATATAA+AGG + chr3_4:26249800-26249819 Msa0496060:intron 25.0%
!!! GTGCAATTTTTCGATATAAA+GGG + chr3_4:26249801-26249820 Msa0496060:intron 25.0%
!!! TGCAATTTTTCGATATAAAG+GGG + chr3_4:26249802-26249821 Msa0496060:intron 25.0%
! AAACATTCTCTGATTATCAA+TGG - chr3_4:26250380-26250399 None:intergenic 25.0%
!! ATTGATAATCAGAGAATGTT+TGG + chr3_4:26250379-26250398 Msa0496060:intron 25.0%
! ATTGTATTGCAATGGTTTAT+CGG + chr3_4:26250416-26250435 Msa0496060:intron 25.0%
! TTGATAGAAGAGATCAAAAT+AGG - chr3_4:26250551-26250570 None:intergenic 25.0%
!! TTTTGTAACTTTGTACCATT+GGG + chr3_4:26250612-26250631 Msa0496060:CDS 25.0%
! AATTAAATAGATAGACAGAG+TGG - chr3_4:26250737-26250756 None:intergenic 25.0%
! TCCAATATTCTATTACTGAA+TGG + chr3_4:26250838-26250857 Msa0496060:intron 25.0%
! ACCATTCAGTAATAGAATAT+TGG - chr3_4:26250842-26250861 None:intergenic 25.0%
!!! ACATGTGCAGTTTTATTATA+AGG + chr3_4:26251252-26251271 Msa0496060:intron 25.0%
! TATATCAAGTGGAAAATCTA+TGG - chr3_4:26251489-26251508 None:intergenic 25.0%
! ATTAAACTCAAAACAGCAAA+AGG + chr3_4:26251607-26251626 Msa0496060:intron 25.0%
! GATAGAATATATTCTTAACC+AGG + chr3_4:26251711-26251730 Msa0496060:intron 25.0%
! AGAATATAAACTTGCATGTT+TGG - chr3_4:26252133-26252152 None:intergenic 25.0%
! ATATTCTATGTGCATATAAC+AGG + chr3_4:26252146-26252165 Msa0496060:intron 25.0%
!!! TCCACTTTTAGAAAACAAAT+AGG + chr3_4:26252293-26252312 Msa0496060:intron 25.0%
!!! CCACTTTTAGAAAACAAATA+GGG + chr3_4:26252294-26252313 Msa0496060:intron 25.0%
! CAAAGAGAACAAAACATAAA+AGG - chr3_4:26252426-26252445 None:intergenic 25.0%
!!! CTTTTATGTTTTGTTCTCTT+TGG + chr3_4:26252424-26252443 Msa0496060:intron 25.0%
!!! TTTTGGCTTTACATAAATAC+TGG - chr3_4:26252452-26252471 None:intergenic 25.0%
!! AGGAAAAAAGTGATACATTT+TGG - chr3_4:26252469-26252488 None:intergenic 25.0%
!! GTAAGAAAAGTGATACATTT+TGG - chr3_4:26252538-26252557 None:intergenic 25.0%
! CAATACATAACAGGATAAAT+TGG - chr3_4:26252594-26252613 None:intergenic 25.0%
! AGTTAGAAACAATACATAAC+AGG - chr3_4:26252603-26252622 None:intergenic 25.0%
! TCGTGAACTATAAAAAAGAA+CGG + chr3_4:26252677-26252696 Msa0496060:intron 25.0%
!! AGAACCATTTTATAAAGTTC+TGG - chr3_4:26252907-26252926 None:intergenic 25.0%
! AAATGGTTCTCGTATTTATA+AGG + chr3_4:26252917-26252936 Msa0496060:intron 25.0%
! TATGAATAGAGAGAATTGAA+TGG + chr3_4:26253143-26253162 Msa0496060:intron 25.0%
! AGTAAACCATGAAATAAATG+AGG - chr3_4:26253567-26253586 None:intergenic 25.0%
!! AAACATTGAAAGTTTAGAAC+AGG + chr3_4:26253724-26253743 Msa0496060:intron 25.0%
!! AACATTGAAAGTTTAGAACA+GGG + chr3_4:26253725-26253744 Msa0496060:intron 25.0%
! AAATCATGTATAGATCAGAA+AGG - chr3_4:26253789-26253808 None:intergenic 25.0%
! GTCTATGTAGATTACAAAAA+TGG + chr3_4:26254075-26254094 Msa0496060:CDS 25.0%
!! CATACAATGACAAAAGTTTT+TGG - chr3_4:26254236-26254255 None:intergenic 25.0%
! GAAGAATTTCTGAGAGAAAA+TGG + chr3_4:26247446-26247465 Msa0496060:CDS 30.0%
!!! GAAAATGGTTTTGAGAAAGA+AGG + chr3_4:26247461-26247480 Msa0496060:CDS 30.0%
ATGTGATAGTTTAAGCACAA+AGG - chr3_4:26247560-26247579 None:intergenic 30.0%
ATTAGAAACATAGAAAACCG+TGG - chr3_4:26247696-26247715 None:intergenic 30.0%
!!! TAATCTTTGTTTTTAACCGG+TGG + chr3_4:26247895-26247914 Msa0496060:intron 30.0%
CAAGTTATTTATTAGACCAC+CGG - chr3_4:26247914-26247933 None:intergenic 30.0%
!!! TGTTGCTTGTTTTAGATAGA+AGG + chr3_4:26247932-26247951 Msa0496060:intron 30.0%
!!! TATTTGCTTGTTGTTTTGGT+AGG + chr3_4:26248072-26248091 Msa0496060:intron 30.0%
AAAATACTCGACAAAAGCAA+TGG + chr3_4:26248096-26248115 Msa0496060:CDS 30.0%
AAAGACTAATGCTAGACAAT+TGG - chr3_4:26248194-26248213 None:intergenic 30.0%
!! TTGTCTTTCCAGATTGATTT+TGG + chr3_4:26248296-26248315 Msa0496060:intron 30.0%
GCTCAAAAATAGACTCAATA+TGG - chr3_4:26248381-26248400 None:intergenic 30.0%
! AAATCTGAAATTTACGTGCA+CGG - chr3_4:26248480-26248499 None:intergenic 30.0%
! CGTACAGATTTTCAATTTCT+TGG + chr3_4:26248566-26248585 Msa0496060:CDS 30.0%
CATCACTAATAAAACATACC+AGG - chr3_4:26248604-26248623 None:intergenic 30.0%
ACATATCTTCTTTATGAGTC+AGG + chr3_4:26248634-26248653 Msa0496060:intron 30.0%
ATCCTATTTCACAAATTCCT+TGG + chr3_4:26248758-26248777 Msa0496060:intron 30.0%
ATCCAAGGAATTTGTGAAAT+AGG - chr3_4:26248763-26248782 None:intergenic 30.0%
! GATGTACCTTTTAAATCGAT+TGG + chr3_4:26248835-26248854 Msa0496060:intron 30.0%
TTCACGTTCCTAATCTATTT+AGG - chr3_4:26248905-26248924 None:intergenic 30.0%
ATCTTTAATCGTTCCATACA+TGG - chr3_4:26249070-26249089 None:intergenic 30.0%
ATGTATGGAACGATTAAAGA+TGG + chr3_4:26249069-26249088 Msa0496060:intron 30.0%
AATCACACGGTTCATAATAA+AGG - chr3_4:26249193-26249212 None:intergenic 30.0%
TAATTTGAACGGTTGAGATT+TGG + chr3_4:26249216-26249235 Msa0496060:intron 30.0%
!! TATTGACCAAGTATTGATGA+CGG - chr3_4:26249364-26249383 None:intergenic 30.0%
! GGTGTAAATTAAGTCTTATC+TGG + chr3_4:26249438-26249457 Msa0496060:intron 30.0%
! TAAATTAAGTCTTATCTGGG+AGG + chr3_4:26249442-26249461 Msa0496060:intron 30.0%
! AAATTAAGTCTTATCTGGGA+GGG + chr3_4:26249443-26249462 Msa0496060:intron 30.0%
ACTTTACCATCTTATCTGTT+GGG - chr3_4:26249481-26249500 None:intergenic 30.0%
TACTTTACCATCTTATCTGT+TGG - chr3_4:26249482-26249501 None:intergenic 30.0%
! AAAACCCTAGTGCTAATTTT+AGG + chr3_4:26249674-26249693 Msa0496060:intron 30.0%
AAGTCCTAAAATTAGCACTA+GGG - chr3_4:26249681-26249700 None:intergenic 30.0%
TAAGTCCTAAAATTAGCACT+AGG - chr3_4:26249682-26249701 None:intergenic 30.0%
AGAAGTTGAAATGAAGAGTT+TGG + chr3_4:26249702-26249721 Msa0496060:intron 30.0%
GAAGTTGAAATGAAGAGTTT+GGG + chr3_4:26249703-26249722 Msa0496060:intron 30.0%
!!! GTAACATTTTTTCGTCTTAC+TGG + chr3_4:26249770-26249789 Msa0496060:intron 30.0%
!!! ATTTTTTCGTCTTACTGGAT+AGG + chr3_4:26249775-26249794 Msa0496060:intron 30.0%
!! AATTTTTCGATATAAAGGGG+AGG + chr3_4:26249805-26249824 Msa0496060:intron 30.0%
AAAAAATGTGACACGACTAT+TGG + chr3_4:26249944-26249963 Msa0496060:intron 30.0%
! AGTTGTATGCAACTTGTTTA+AGG - chr3_4:26249985-26250004 None:intergenic 30.0%
ACTACAACAAAAGATAGAAG+AGG + chr3_4:26250032-26250051 Msa0496060:intron 30.0%
AATGATTTAAGTAGAGGGAA+TGG - chr3_4:26250128-26250147 None:intergenic 30.0%
AAATCAAAGCTCAGAAAGAA+TGG - chr3_4:26250295-26250314 None:intergenic 30.0%
ATCAATGCTCTTCTTGAAAA+AGG + chr3_4:26250497-26250516 Msa0496060:CDS 30.0%
TCAAAATAGGTAGGTAAAGT+AGG - chr3_4:26250538-26250557 None:intergenic 30.0%
TAGAAGAGATCAAAATAGGT+AGG - chr3_4:26250547-26250566 None:intergenic 30.0%
CAATGGTACAAAGTTACAAA+AGG - chr3_4:26250613-26250632 None:intergenic 30.0%
! CTTTTGTAACTTTGTACCAT+TGG + chr3_4:26250611-26250630 Msa0496060:CDS 30.0%
TAGTAGAAAATTTGGATGTG+AGG - chr3_4:26250770-26250789 None:intergenic 30.0%
TGAAAATATATGCTACGAGT+AGG - chr3_4:26251190-26251209 None:intergenic 30.0%
AATGAGAGTAGTTTCTGTAT+AGG - chr3_4:26251218-26251237 None:intergenic 30.0%
TCTTCAATCTTATCAGAGTT+TGG - chr3_4:26251374-26251393 None:intergenic 30.0%
CTTCATGCATTTATATCAAG+TGG - chr3_4:26251500-26251519 None:intergenic 30.0%
TATAAATGCATGAAGATGTG+TGG + chr3_4:26251505-26251524 Msa0496060:intron 30.0%
! TACATTTTTGCGTTTAACGT+TGG + chr3_4:26251551-26251570 Msa0496060:intron 30.0%
TTCTTGCATCCACTATATTA+TGG + chr3_4:26251734-26251753 Msa0496060:CDS 30.0%
TTGAATTCTTTGGACTTCAT+TGG + chr3_4:26251833-26251852 Msa0496060:CDS 30.0%
! TCATCAAGGAAGATTCATTT+TGG - chr3_4:26251992-26252011 None:intergenic 30.0%
!! TTTTCTAAAAGTGGACAAGA+AGG - chr3_4:26252288-26252307 None:intergenic 30.0%
!! CCCTATTTGTTTTCTAAAAG+TGG - chr3_4:26252297-26252316 None:intergenic 30.0%
TTTGAATCTTCTGTAGTGTT+TGG + chr3_4:26252374-26252393 Msa0496060:intron 30.0%
AGAGAACAAAACATAAAAGG+CGG - chr3_4:26252423-26252442 None:intergenic 30.0%
GAAAATAGAACAGAACATGT+AGG - chr3_4:26252489-26252508 None:intergenic 30.0%
!!! CATTTTGGTTCTACACAAAT+GGG - chr3_4:26252523-26252542 None:intergenic 30.0%
!!! ACATTTTGGTTCTACACAAA+TGG - chr3_4:26252524-26252543 None:intergenic 30.0%
! TAACTTGTCTCTCAAATGAA+TGG + chr3_4:26252618-26252637 Msa0496060:intron 30.0%
AGAACGGAAATATGTGTAAA+TGG + chr3_4:26252693-26252712 Msa0496060:intron 30.0%
TTATGTTATATGGCTCAACA+AGG + chr3_4:26252727-26252746 Msa0496060:intron 30.0%
AATCCTGATTAGATAGCATA+AGG + chr3_4:26252810-26252829 Msa0496060:intron 30.0%
GTTGAAGATATGTCAACAAT+AGG + chr3_4:26252832-26252851 Msa0496060:intron 30.0%
TGAGCCAGAACTTTATAAAA+TGG + chr3_4:26252900-26252919 Msa0496060:intron 30.0%
ATAGGTTTAACTCATAGATG+AGG - chr3_4:26253100-26253119 None:intergenic 30.0%
TTCTCATAAATCAATCAAGC+TGG + chr3_4:26253174-26253193 Msa0496060:intron 30.0%
! TGATTTGTGTTTGTTACACA+TGG - chr3_4:26253250-26253269 None:intergenic 30.0%
TTTAGTTAAGTGAGATCACA+AGG - chr3_4:26253527-26253546 None:intergenic 30.0%
TGCATTCCTCATTTATTTCA+TGG + chr3_4:26253558-26253577 Msa0496060:intron 30.0%
! GTTATGAACTTGTTTAGTGA+CGG - chr3_4:26253619-26253638 None:intergenic 30.0%
!! CTATACATGATTTTGAGAAG+AGG + chr3_4:26253796-26253815 Msa0496060:intron 30.0%
TGTATATCATTTGAATGCAC+AGG + chr3_4:26253965-26253984 Msa0496060:intron 30.0%
GTATATCATTTGAATGCACA+GGG + chr3_4:26253966-26253985 Msa0496060:intron 30.0%
GTATTTGGTAAGACACATAA+TGG - chr3_4:26254193-26254212 None:intergenic 30.0%
ATGCTTTGTATAAACTAGAG+TGG + chr3_4:26254257-26254276 Msa0496060:three_prime_UTR 30.0%
!!! CTTTTTGATGATTTGGTGCT+TGG + chr3_4:26247584-26247603 Msa0496060:intron 35.0%
! TTGGTGCTTGGAATACTATT+TGG + chr3_4:26247596-26247615 Msa0496060:intron 35.0%
! GTGTTATTCTAACCTATCCA+CGG + chr3_4:26247676-26247695 Msa0496060:intron 35.0%
AAACATAGAAAACCGTGGAT+AGG - chr3_4:26247691-26247710 None:intergenic 35.0%
CATACCTTCAGTATAAGCAT+AGG - chr3_4:26247999-26248018 None:intergenic 35.0%
! AGGATCAAGGAGCATAATTT+GGG - chr3_4:26248042-26248061 None:intergenic 35.0%
! AAGGATCAAGGAGCATAATT+TGG - chr3_4:26248043-26248062 None:intergenic 35.0%
TGCAAAAATCTTTCCTCACT+TGG - chr3_4:26248271-26248290 None:intergenic 35.0%
!! GCATTCAAATGTTGCTTTAC+AGG + chr3_4:26248336-26248355 Msa0496060:intron 35.0%
TGTTGATCTTATAGCCAAGT+TGG + chr3_4:26248534-26248553 Msa0496060:CDS 35.0%
GTTGATCTTATAGCCAAGTT+GGG + chr3_4:26248535-26248554 Msa0496060:CDS 35.0%
TAAGTCAAATGACTTACACC+TGG - chr3_4:26249241-26249260 None:intergenic 35.0%
TTAGTTGAATGGCTGAGATT+TGG - chr3_4:26248696-26248715 None:intergenic 35.0%
ATAAGAACATGTGCCATGTA+TGG + chr3_4:26249054-26249073 Msa0496060:intron 35.0%
TATGGAACGATTAAAGATGG+AGG + chr3_4:26249072-26249091 Msa0496060:intron 35.0%
TGCAATACAGATCTTGAGTT+AGG + chr3_4:26249137-26249156 Msa0496060:intron 35.0%
GCAATACAGATCTTGAGTTA+GGG + chr3_4:26249138-26249157 Msa0496060:intron 35.0%
TAAGTCAAATGACTTACACC+TGG + chr3_4:26249241-26249260 Msa0496060:intron 35.0%
!!! GGAGGAGTTGATAAACTTTT+AGG - chr3_4:26249343-26249362 None:intergenic 35.0%
ATGTCTTTATGAGCCATAAG+AGG - chr3_4:26249398-26249417 None:intergenic 35.0%
AGAGACAGAAAAACTATCAC+TGG - chr3_4:26249623-26249642 None:intergenic 35.0%
GTTGCAAGTGATACTAATAG+TGG - chr3_4:26249647-26249666 None:intergenic 35.0%
AAGCTCAACGTAATAGTTGA+AGG - chr3_4:26250008-26250027 None:intergenic 35.0%
TGGAGCAATTTATTGCGTAA+AGG - chr3_4:26250108-26250127 None:intergenic 35.0%
! TGTGGCAGGTTATTTAGAAT+GGG - chr3_4:26250159-26250178 None:intergenic 35.0%
ATGTGGCAGGTTATTTAGAA+TGG - chr3_4:26250160-26250179 None:intergenic 35.0%
ATTCTAAATAACCTGCCACA+TGG + chr3_4:26250159-26250178 Msa0496060:intron 35.0%
! ATTGCCATGGGATTTTTATC+CGG + chr3_4:26250229-26250248 Msa0496060:intron 35.0%
TAAACCGGATAAAAATCCCA+TGG - chr3_4:26250236-26250255 None:intergenic 35.0%
! TGGGATTTTTATCCGGTTTA+TGG + chr3_4:26250236-26250255 Msa0496060:intron 35.0%
AAGGAAACTATGCCATAAAC+CGG - chr3_4:26250251-26250270 None:intergenic 35.0%
!! CTTTCTGAGCTTTGATTTTG+AGG + chr3_4:26250297-26250316 Msa0496060:intron 35.0%
GAACCAATATCAATGCTGAA+GGG + chr3_4:26250453-26250472 Msa0496060:CDS 35.0%
!! TATCCCTTCAGCATTGATAT+TGG - chr3_4:26250459-26250478 None:intergenic 35.0%
ACAAAAGGTTGAATACCTGT+GGG - chr3_4:26250598-26250617 None:intergenic 35.0%
TACAAAAGGTTGAATACCTG+TGG - chr3_4:26250599-26250618 None:intergenic 35.0%
AAATAGATAGACAGAGTGGT+GGG - chr3_4:26250733-26250752 None:intergenic 35.0%
TAAATAGATAGACAGAGTGG+TGG - chr3_4:26250734-26250753 None:intergenic 35.0%
! GATACTTGCTTTGCAAGTTT+TGG + chr3_4:26250908-26250927 Msa0496060:CDS 35.0%
!!! GATCTATTTTGACTTCTTCC+AGG - chr3_4:26251013-26251032 None:intergenic 35.0%
TAAGGCTTACACAATAGTTG+AGG + chr3_4:26251270-26251289 Msa0496060:intron 35.0%
TCGTGAACACTAGAAATTGA+AGG + chr3_4:26251650-26251669 Msa0496060:intron 35.0%
ACACTAGAAATTGAAGGTTG+AGG + chr3_4:26251656-26251675 Msa0496060:intron 35.0%
AGGTTGAGGATATTTAACCT+TGG + chr3_4:26251670-26251689 Msa0496060:intron 35.0%
GGATAGTCTCCATAATATAG+TGG - chr3_4:26251746-26251765 None:intergenic 35.0%
ACCTCGTTGTATAGTGATTT+AGG - chr3_4:26251859-26251878 None:intergenic 35.0%
CTTGTCGTAATGACATTCTT+CGG - chr3_4:26251906-26251925 None:intergenic 35.0%
GAAAAACAGCTCAATCATCA+AGG - chr3_4:26252006-26252025 None:intergenic 35.0%
!!! AGCTGTTTTTCACAGTTGAA+TGG + chr3_4:26252015-26252034 Msa0496060:intron 35.0%
!!! GCTGTTTTTCACAGTTGAAT+GGG + chr3_4:26252016-26252035 Msa0496060:intron 35.0%
! TTTTTCACAGTTGAATGGGA+AGG + chr3_4:26252020-26252039 Msa0496060:intron 35.0%
AGAAAGTCACATACCATTCT+CGG - chr3_4:26252262-26252281 None:intergenic 35.0%
AACCACTCGATAGAAAATTG+AGG + chr3_4:26252321-26252340 Msa0496060:intron 35.0%
ACCACTCGATAGAAAATTGA+GGG + chr3_4:26252322-26252341 Msa0496060:intron 35.0%
CGAGTGTGAGTTATGTTATA+TGG + chr3_4:26252717-26252736 Msa0496060:intron 35.0%
CAACCTTATGCTATCTAATC+AGG - chr3_4:26252816-26252835 None:intergenic 35.0%
GTCTTTCCATTTAACAGGTA+TGG + chr3_4:26252942-26252961 Msa0496060:intron 35.0%
CATCATCCATACCTGTTAAA+TGG - chr3_4:26252951-26252970 None:intergenic 35.0%
TCATCTAGCATCTCATTTAG+TGG - chr3_4:26252991-26253010 None:intergenic 35.0%
AGGTGTGTTTGAGAAGAAAT+TGG - chr3_4:26253080-26253099 None:intergenic 35.0%
TTATCACACCATATCAGCTA+GGG - chr3_4:26253469-26253488 None:intergenic 35.0%
ATTATCACACCATATCAGCT+AGG - chr3_4:26253470-26253489 None:intergenic 35.0%
! TGACGGACATATGGATATTA+AGG - chr3_4:26253602-26253621 None:intergenic 35.0%
ATGCTGGTGAAAACTGTATT+TGG - chr3_4:26253868-26253887 None:intergenic 35.0%
GATCAGTTGTTATGTTATGC+TGG - chr3_4:26253884-26253903 None:intergenic 35.0%
ATTACTGGACAACTTCGAAT+GGG + chr3_4:26254023-26254042 Msa0496060:CDS 35.0%
CAAGGTTATACCAAACGTTT+CGG + chr3_4:26254048-26254067 Msa0496060:CDS 35.0%
TTATACCAAACGTTTCGGAT+TGG + chr3_4:26254053-26254072 Msa0496060:CDS 35.0%
! ATTACAAAAATGGACTCACC+AGG + chr3_4:26254085-26254104 Msa0496060:CDS 35.0%
! TTTTCGCGGTTTCTTAAAGA+TGG + chr3_4:26254132-26254151 Msa0496060:CDS 35.0%
TTTCGCGGTTTCTTAAAGAT+GGG + chr3_4:26254133-26254152 Msa0496060:CDS 35.0%
TTCCCTTCTGACTTCATCTT+CGG + chr3_4:26247509-26247528 Msa0496060:CDS 40.0%
TGCCATCTAAAAAGGCCTAA+CGG - chr3_4:26247871-26247890 None:intergenic 40.0%
!! TTAGATAGAAGGTGCTAGCA+AGG + chr3_4:26247943-26247962 Msa0496060:intron 40.0%
TGGTAGAGGTCCTAGTATAT+GGG + chr3_4:26247970-26247989 Msa0496060:CDS 40.0%
GATGCCTATGCTTATACTGA+AGG + chr3_4:26247992-26248011 Msa0496060:CDS 40.0%
ATAGGATAAAGGGTCGCATA+TGG - chr3_4:26248745-26248764 None:intergenic 40.0%
! TTTTAGGCTTAAGGCTCTCA+TGG - chr3_4:26249327-26249346 None:intergenic 40.0%
AATGTGACACGACTATTGGT+AGG + chr3_4:26249948-26249967 Msa0496060:intron 40.0%
TGCAGACTGTTTGAGTATGT+AGG - chr3_4:26250060-26250079 None:intergenic 40.0%
!!! CGTAAAGGTTTTGAGCCATT+TGG - chr3_4:26250093-26250112 None:intergenic 40.0%
TTCGTAACAAACTAGCCATG+TGG - chr3_4:26250177-26250196 None:intergenic 40.0%
CAATGGTTTATCGGTGTAGA+TGG + chr3_4:26250425-26250444 Msa0496060:intron 40.0%
TTTATCGGTGTAGATGGCTT+AGG + chr3_4:26250431-26250450 Msa0496060:intron 40.0%
GGAACCAATATCAATGCTGA+AGG + chr3_4:26250452-26250471 Msa0496060:CDS 40.0%
CTAAGTTACTCATTTCCCAC+AGG + chr3_4:26250580-26250599 Msa0496060:intron 40.0%
! ATTGACTCATCAAGATGCAG+TGG - chr3_4:26250643-26250662 None:intergenic 40.0%
ACTGCATCTTGATGAGTCAA+TGG + chr3_4:26250642-26250661 Msa0496060:CDS 40.0%
CTGCATCTTGATGAGTCAAT+GGG + chr3_4:26250643-26250662 Msa0496060:CDS 40.0%
CTGAATGGTGTGTTCATATG+TGG + chr3_4:26250853-26250872 Msa0496060:intron 40.0%
TTGGCGATAGAGTGAAAAAC+TGG + chr3_4:26250927-26250946 Msa0496060:CDS 40.0%
! TGATGATGTGCTGCTAAGTA+TGG - chr3_4:26251043-26251062 None:intergenic 40.0%
AGCAGCACATCATCAAATCT+TGG + chr3_4:26251048-26251067 Msa0496060:CDS 40.0%
CTTGTACTTGCTTCGGTAAA+TGG - chr3_4:26251092-26251111 None:intergenic 40.0%
CATTTACCGAAGCAAGTACA+AGG + chr3_4:26251090-26251109 Msa0496060:CDS 40.0%
CTTTGACCTTGTACTTGCTT+CGG - chr3_4:26251099-26251118 None:intergenic 40.0%
CTTCATTCTCTTGATGTTCC+AGG + chr3_4:26251298-26251317 Msa0496060:intron 40.0%
TTGATGTTCCAGGATAAGCA+AGG + chr3_4:26251308-26251327 Msa0496060:intron 40.0%
TGATGTTCCAGGATAAGCAA+GGG + chr3_4:26251309-26251328 Msa0496060:intron 40.0%
! AGACACCTAGATTTTCGTCT+TGG + chr3_4:26251410-26251429 Msa0496060:CDS 40.0%
GTGTGGACACAAACTTACAA+AGG + chr3_4:26251522-26251541 Msa0496060:intron 40.0%
CTCAAAACAGCAAAAGGTCT+TGG + chr3_4:26251613-26251632 Msa0496060:intron 40.0%
TAAGCATGCATCTTACACCA+AGG - chr3_4:26251690-26251709 None:intergenic 40.0%
!! ATATAGTGGATGCAAGAACC+TGG - chr3_4:26251732-26251751 None:intergenic 40.0%
TTATCCTCCTCCGAGAATTT+GGG - chr3_4:26251803-26251822 None:intergenic 40.0%
TTTATCCTCCTCCGAGAATT+TGG - chr3_4:26251804-26251823 None:intergenic 40.0%
GCCTAAATCACTATACAACG+AGG + chr3_4:26251855-26251874 Msa0496060:CDS 40.0%
CGAAGAATGTCATTACGACA+AGG + chr3_4:26251904-26251923 Msa0496060:CDS 40.0%
TACCATCTATGTCTCTCTGT+CGG + chr3_4:26252070-26252089 Msa0496060:intron 40.0%
AGTGGCTATATGTTGTTCCT+TGG + chr3_4:26252178-26252197 Msa0496060:CDS 40.0%
GTGGCTATATGTTGTTCCTT+GGG + chr3_4:26252179-26252198 Msa0496060:CDS 40.0%
TGGCTATATGTTGTTCCTTG+GGG + chr3_4:26252180-26252199 Msa0496060:CDS 40.0%
CCATTCTCGGTGACATATAT+CGG - chr3_4:26252249-26252268 None:intergenic 40.0%
! TCCCTCAATTTTCTATCGAG+TGG - chr3_4:26252326-26252345 None:intergenic 40.0%
!! TTGGTTCTACACAAATGGGT+TGG - chr3_4:26252519-26252538 None:intergenic 40.0%
AAACGATAGAAGGGGACAAA+AGG - chr3_4:26252560-26252579 None:intergenic 40.0%
!! TATTTTGAGAGCTGCAACCT+AGG + chr3_4:26252768-26252787 Msa0496060:intron 40.0%
TATGTCAACAATAGGATCCG+CGG + chr3_4:26252840-26252859 Msa0496060:intron 40.0%
CATCTATTAAATCAGAGCCG+CGG - chr3_4:26252860-26252879 None:intergenic 40.0%
AGGCTGTCTTTCCATTTAAC+AGG + chr3_4:26252937-26252956 Msa0496060:intron 40.0%
AGAACGATTACTTGTGCAAC+AGG - chr3_4:26253397-26253416 None:intergenic 40.0%
TAGTCTTTCCCTAGCTGATA+TGG + chr3_4:26253458-26253477 Msa0496060:intron 40.0%
!! CTTGTTTAGTGACGGACATA+TGG - chr3_4:26253611-26253630 None:intergenic 40.0%
TTAGAACAGGGTCAGAAACT+TGG + chr3_4:26253737-26253756 Msa0496060:intron 40.0%
ATCATTTGAATGCACAGGGA+TGG + chr3_4:26253970-26253989 Msa0496060:intron 40.0%
ACACTTTGCATGGTCATTAC+TGG + chr3_4:26254008-26254027 Msa0496060:CDS 40.0%
CATTACTGGACAACTTCGAA+TGG + chr3_4:26254022-26254041 Msa0496060:CDS 40.0%
ATAGACCAATCCGAAACGTT+TGG - chr3_4:26254061-26254080 None:intergenic 40.0%
ACCAATACGCAGAAGACTTT+GGG - chr3_4:26254113-26254132 None:intergenic 40.0%
AACCAATACGCAGAAGACTT+TGG - chr3_4:26254114-26254133 None:intergenic 40.0%
TTCGCGGTTTCTTAAAGATG+GGG + chr3_4:26254134-26254153 Msa0496060:CDS 40.0%
TCTTAAAGATGGGGCAAACA+AGG + chr3_4:26254143-26254162 Msa0496060:CDS 40.0%
CTTAAAGATGGGGCAAACAA+GGG + chr3_4:26254144-26254163 Msa0496060:CDS 40.0%
CTCCGAAGATGAAGTCAGAA+GGG - chr3_4:26247514-26247533 None:intergenic 45.0%
ACTCCGAAGATGAAGTCAGA+AGG - chr3_4:26247515-26247534 None:intergenic 45.0%
AGGAACCTGATAAGCAGAAG+TGG - chr3_4:26247540-26247559 None:intergenic 45.0%
!! ATAGAAGGTGCTAGCAAGGA+GGG + chr3_4:26247947-26247966 Msa0496060:CDS 45.0%
GTGGTAGAGGTCCTAGTATA+TGG + chr3_4:26247969-26247988 Msa0496060:CDS 45.0%
GCATAGGCATCCCATATACT+AGG - chr3_4:26247983-26248002 None:intergenic 45.0%
! TCTTGGTCTCGTATTTTCCC+TGG + chr3_4:26248583-26248602 Msa0496060:CDS 45.0%
! TGACTTACACCTGGTGTCAA+CGG - chr3_4:26249250-26249269 None:intergenic 45.0%
! TGACTTACACCTGGTGTCAA+CGG + chr3_4:26249250-26249269 Msa0496060:intron 45.0%
ACTCCTCCGTCATCAATACT+TGG + chr3_4:26249355-26249374 Msa0496060:intron 45.0%
!! TGACCAAGTATTGATGACGG+AGG - chr3_4:26249361-26249380 None:intergenic 45.0%
! AAGTCTTATCTGGGAGGGAA+TGG + chr3_4:26249448-26249467 Msa0496060:intron 45.0%
CATCTTATCTGTTGGGCCAA+AGG - chr3_4:26249474-26249493 None:intergenic 45.0%
CTTTGGCCCAACAGATAAGA+TGG + chr3_4:26249472-26249491 Msa0496060:intron 45.0%
!!! GGTTTTGAGCCATTTGGCTA+GGG - chr3_4:26250087-26250106 None:intergenic 45.0%
!!! AGGTTTTGAGCCATTTGGCT+AGG - chr3_4:26250088-26250107 None:intergenic 45.0%
TAACAAACTAGCCATGTGGC+AGG - chr3_4:26250173-26250192 None:intergenic 45.0%
! ATAGAGCGTGTGAGAGTATG+GGG - chr3_4:26250205-26250224 None:intergenic 45.0%
! GATAGAGCGTGTGAGAGTAT+GGG - chr3_4:26250206-26250225 None:intergenic 45.0%
TGATAGAGCGTGTGAGAGTA+TGG - chr3_4:26250207-26250226 None:intergenic 45.0%
ACGCTCTATCAACATTGCCA+TGG + chr3_4:26250216-26250235 Msa0496060:intron 45.0%
CGCTCTATCAACATTGCCAT+GGG + chr3_4:26250217-26250236 Msa0496060:intron 45.0%
CATCTTGATGAGTCAATGGG+AGG + chr3_4:26250646-26250665 Msa0496060:CDS 45.0%
TTGATGAGTCAATGGGAGGA+TGG + chr3_4:26250650-26250669 Msa0496060:CDS 45.0%
! AGCATGAGCATCGTCATACT+TGG - chr3_4:26250707-26250726 None:intergenic 45.0%
AATGGAAACAGCTGCTGCAT+GGG - chr3_4:26251074-26251093 None:intergenic 45.0%
AAATGGAAACAGCTGCTGCA+TGG - chr3_4:26251075-26251094 None:intergenic 45.0%
GATGTTCCAGGATAAGCAAG+GGG + chr3_4:26251310-26251329 Msa0496060:intron 45.0%
ATGTTCCAGGATAAGCAAGG+GGG + chr3_4:26251311-26251330 Msa0496060:intron 45.0%
AGTCGTTCACGCATAACTTC+AGG - chr3_4:26251767-26251786 None:intergenic 45.0%
GAAGTTATGCGTGAACGACT+TGG + chr3_4:26251767-26251786 Msa0496060:CDS 45.0%
! AGACCGACTTCCCAAATTCT+CGG + chr3_4:26251790-26251809 Msa0496060:CDS 45.0%
TTCACAGTTGAATGGGAAGG+CGG + chr3_4:26252023-26252042 Msa0496060:intron 45.0%
TATAACAGGCAGCATCAGAG+TGG + chr3_4:26252160-26252179 Msa0496060:intron 45.0%
ATGTTGTTCCTTGGGGTCTT+CGG + chr3_4:26252187-26252206 Msa0496060:CDS 45.0%
ATAATCTTCCGAAGACCCCA+AGG - chr3_4:26252198-26252217 None:intergenic 45.0%
CCGATATATGTCACCGAGAA+TGG + chr3_4:26252246-26252265 Msa0496060:CDS 45.0%
TATGGCTCAACAAGGAAGAG+TGG + chr3_4:26252735-26252754 Msa0496060:intron 45.0%
CTGCAACCTAGGAATATGAC+TGG + chr3_4:26252779-26252798 Msa0496060:intron 45.0%
ACCTAGGAATATGACTGGCA+TGG + chr3_4:26252784-26252803 Msa0496060:intron 45.0%
ACTGCGAGTTCGCTATTACA+AGG + chr3_4:26253014-26253033 Msa0496060:CDS 45.0%
CTGCGAGTTCGCTATTACAA+GGG + chr3_4:26253015-26253034 Msa0496060:CDS 45.0%
ATATCTTGCATCACTTGCGC+AGG + chr3_4:26253038-26253057 Msa0496060:CDS 45.0%
ATGTGAGAGGACACTTTGCA+TGG + chr3_4:26253998-26254017 Msa0496060:CDS 45.0%
ACCCAAAGTCTTCTGCGTAT+TGG + chr3_4:26254109-26254128 Msa0496060:CDS 45.0%
!!! CTTCTGCGTATTGGTTTTCG+CGG + chr3_4:26254118-26254137 Msa0496060:CDS 45.0%
AGTCGCCACTTCTGCTTATC+AGG + chr3_4:26247532-26247551 Msa0496060:CDS 50.0%
! CGCCGTTAGGCCTTTTTAGA+TGG + chr3_4:26247866-26247885 Msa0496060:intron 50.0%
!! GATAGAAGGTGCTAGCAAGG+AGG + chr3_4:26247946-26247965 Msa0496060:intron 50.0%
! GTAGCTGACTCAACCAAGTG+AGG + chr3_4:26248255-26248274 Msa0496060:intron 50.0%
GTACGCGTTGAAACCCAACT+TGG - chr3_4:26248551-26248570 None:intergenic 50.0%
ATCTATCCACTAGCAGCTCC+TGG - chr3_4:26249108-26249127 None:intergenic 50.0%
TTGAGTTAGGGTGCACCGAA+AGG + chr3_4:26249150-26249169 Msa0496060:intron 50.0%
GCTTAAGGCTCTCATGGACA+TGG - chr3_4:26249321-26249340 None:intergenic 50.0%
TTTGAGCCATTTGGCTAGGG+AGG - chr3_4:26250084-26250103 None:intergenic 50.0%
GATGCAGTGGAAGATCCCAA+TGG - chr3_4:26250630-26250649 None:intergenic 50.0%
GTGTGTTCATATGTGGCGTG+TGG + chr3_4:26250860-26250879 Msa0496060:intron 50.0%
AGCATCATACCCACCAACTG+CGG - chr3_4:26250978-26250997 None:intergenic 50.0%
GATGCTGGAGTTAATGCTCC+TGG + chr3_4:26250992-26251011 Msa0496060:CDS 50.0%
GATAAGCAAGGGGGACAAGT+GGG + chr3_4:26251320-26251339 Msa0496060:CDS 50.0%
ATAAGCAAGGGGGACAAGTG+GGG + chr3_4:26251321-26251340 Msa0496060:CDS 50.0%
GCTGGTGGTAGACTCTGAAT+GGG + chr3_4:26251343-26251362 Msa0496060:CDS 50.0%
CCTCCGAGAATTTGGGAAGT+CGG - chr3_4:26251796-26251815 None:intergenic 50.0%
ACTTCCCAAATTCTCGGAGG+AGG + chr3_4:26251796-26251815 Msa0496060:CDS 50.0%
TTACGACAAGGCACAACAGC+TGG + chr3_4:26251916-26251935 Msa0496060:CDS 50.0%
GCACAACAGCTGGACAGAAT+TGG + chr3_4:26251926-26251945 Msa0496060:CDS 50.0%
TCACAGTTGAATGGGAAGGC+GGG + chr3_4:26252024-26252043 Msa0496060:intron 50.0%
CACCGACAGAGAGACATAGA+TGG - chr3_4:26252075-26252094 None:intergenic 50.0%
GCCATGCCAGTCATATTCCT+AGG - chr3_4:26252788-26252807 None:intergenic 50.0%
! GACAACTTCGAATGGGCTCA+AGG + chr3_4:26254030-26254049 Msa0496060:CDS 50.0%
ACCAAGCAACTGAGCTCAAG+TGG + chr3_4:26254381-26254400 Msa0496060:three_prime_UTR 50.0%
ACCACTTGAGCTCAGTTGCT+TGG - chr3_4:26254385-26254404 None:intergenic 50.0%
AGTCAGGATCCGTTGACACC+AGG + chr3_4:26248650-26248669 Msa0496060:intron 55.0%
TCAGGGATGTCGCTGATCCA+AGG - chr3_4:26248778-26248797 None:intergenic 55.0%
GATGGAGGAGATGTGAAGCC+AGG + chr3_4:26249087-26249106 Msa0496060:intron 55.0%
AGTCAGGATCCGTTGACACC+AGG - chr3_4:26248650-26248669 None:intergenic 55.0%
ATCTGGGAGGGAATGGCCTT+TGG + chr3_4:26249455-26249474 Msa0496060:intron 55.0%
CCACCAACTGCGGTTTGAAG+GGG - chr3_4:26250968-26250987 None:intergenic 55.0%
CCCACCAACTGCGGTTTGAA+GGG - chr3_4:26250969-26250988 None:intergenic 55.0%
CCCTTCAAACCGCAGTTGGT+GGG + chr3_4:26250966-26250985 Msa0496060:CDS 55.0%
ACCCACCAACTGCGGTTTGA+AGG - chr3_4:26250970-26250989 None:intergenic 55.0%
!! GCAGTTGGTGGGTATGATGC+TGG + chr3_4:26250977-26250996 Msa0496060:CDS 55.0%
CTTGTCCCCCTTGCTTATCC+TGG - chr3_4:26251319-26251338 None:intergenic 55.0%
GGATAAGCAAGGGGGACAAG+TGG + chr3_4:26251319-26251338 Msa0496060:intron 55.0%
GGCTGGTGGTAGACTCTGAA+TGG + chr3_4:26251342-26251361 Msa0496060:CDS 55.0%
ATCTAGGTGTCTCGCAGCAG+CGG - chr3_4:26251402-26251421 None:intergenic 55.0%
CCGACTTCCCAAATTCTCGG+AGG + chr3_4:26251793-26251812 Msa0496060:CDS 55.0%
CACAGTTGAATGGGAAGGCG+GGG + chr3_4:26252025-26252044 Msa0496060:intron 55.0%
AGGGATGGAGCTGATGTGAG+AGG + chr3_4:26253985-26254004 Msa0496060:intron 55.0%
GAGCAACAAGCTGCGCCGTT+AGG + chr3_4:26247853-26247872 Msa0496060:intron 60.0%
!! GAAGGTGCTAGCAAGGAGGG+TGG + chr3_4:26247950-26247969 Msa0496060:CDS 60.0%
GCTAGCAAGGAGGGTGGTAG+AGG + chr3_4:26247956-26247975 Msa0496060:CDS 60.0%
GTGAAGCCAGGAGCTGCTAG+TGG + chr3_4:26249099-26249118 Msa0496060:intron 60.0%
CTGCAGCCTCCCTAGCCAAA+TGG + chr3_4:26250075-26250094 Msa0496060:intron 60.0%
GAGCCCCTTCAAACCGCAGT+TGG + chr3_4:26250962-26250981 Msa0496060:CDS 60.0%
CCCCTTCAAACCGCAGTTGG+TGG + chr3_4:26250965-26250984 Msa0496060:CDS 60.0%
CGGGGAGCTCATTGGTGAGA+AGG + chr3_4:26252043-26252062 Msa0496060:CDS 60.0%
CGCAGAAGACTTTGGGTGCC+TGG - chr3_4:26254106-26254125 None:intergenic 60.0%
TGGGAAGGCGGGGAGCTCAT+TGG + chr3_4:26252035-26252054 Msa0496060:CDS 65.0%
GCAAGGGGGACAAGTGGGGC+TGG + chr3_4:26251325-26251344 Msa0496060:CDS 70.0%
AGGGGGACAAGTGGGGCTGG+TGG + chr3_4:26251328-26251347 Msa0496060:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 26247434 26254407 26247434 ID=Msa0496060;Name=Msa0496060
chr3_4 mRNA 26247434 26254407 26247434 ID=Msa0496060-mRNA-1;Parent=Msa0496060;Name=Msa0496060-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.92|0.85|1|0.92|0.85|14|211|491
chr3_4 exon 26247434 26247553 26247434 ID=Msa0496060-mRNA-1:exon:6264;Parent=Msa0496060-mRNA-1
chr3_4 exon 26247947 26248013 26247947 ID=Msa0496060-mRNA-1:exon:6265;Parent=Msa0496060-mRNA-1
chr3_4 exon 26248094 26248152 26248094 ID=Msa0496060-mRNA-1:exon:6266;Parent=Msa0496060-mRNA-1
chr3_4 exon 26248529 26248604 26248529 ID=Msa0496060-mRNA-1:exon:6267;Parent=Msa0496060-mRNA-1
chr3_4 exon 26250444 26250518 26250444 ID=Msa0496060-mRNA-1:exon:6268;Parent=Msa0496060-mRNA-1
chr3_4 exon 26250602 26250689 26250602 ID=Msa0496060-mRNA-1:exon:6269;Parent=Msa0496060-mRNA-1
chr3_4 exon 26250886 26251111 26250886 ID=Msa0496060-mRNA-1:exon:6270;Parent=Msa0496060-mRNA-1
chr3_4 exon 26251320 26251435 26251320 ID=Msa0496060-mRNA-1:exon:6271;Parent=Msa0496060-mRNA-1
chr3_4 exon 26251733 26251947 26251733 ID=Msa0496060-mRNA-1:exon:6272;Parent=Msa0496060-mRNA-1
chr3_4 exon 26252030 26252064 26252030 ID=Msa0496060-mRNA-1:exon:6273;Parent=Msa0496060-mRNA-1
chr3_4 exon 26252168 26252267 26252168 ID=Msa0496060-mRNA-1:exon:6274;Parent=Msa0496060-mRNA-1
chr3_4 exon 26252959 26253067 26252959 ID=Msa0496060-mRNA-1:exon:6275;Parent=Msa0496060-mRNA-1
chr3_4 exon 26253987 26254278 26253987 ID=Msa0496060-mRNA-1:exon:6276;Parent=Msa0496060-mRNA-1
chr3_4 exon 26254299 26254407 26254299 ID=Msa0496060-mRNA-1:exon:6277;Parent=Msa0496060-mRNA-1
chr3_4 CDS 26247434 26247553 26247434 ID=Msa0496060-mRNA-1:cds;Parent=Msa0496060-mRNA-1
chr3_4 CDS 26247947 26248013 26247947 ID=Msa0496060-mRNA-1:cds;Parent=Msa0496060-mRNA-1
chr3_4 CDS 26248094 26248152 26248094 ID=Msa0496060-mRNA-1:cds;Parent=Msa0496060-mRNA-1
chr3_4 CDS 26248529 26248604 26248529 ID=Msa0496060-mRNA-1:cds;Parent=Msa0496060-mRNA-1
chr3_4 CDS 26250444 26250518 26250444 ID=Msa0496060-mRNA-1:cds;Parent=Msa0496060-mRNA-1
chr3_4 CDS 26250602 26250689 26250602 ID=Msa0496060-mRNA-1:cds;Parent=Msa0496060-mRNA-1
chr3_4 CDS 26250886 26251111 26250886 ID=Msa0496060-mRNA-1:cds;Parent=Msa0496060-mRNA-1
chr3_4 CDS 26251320 26251435 26251320 ID=Msa0496060-mRNA-1:cds;Parent=Msa0496060-mRNA-1
chr3_4 CDS 26251733 26251947 26251733 ID=Msa0496060-mRNA-1:cds;Parent=Msa0496060-mRNA-1
chr3_4 CDS 26252030 26252064 26252030 ID=Msa0496060-mRNA-1:cds;Parent=Msa0496060-mRNA-1
chr3_4 CDS 26252168 26252267 26252168 ID=Msa0496060-mRNA-1:cds;Parent=Msa0496060-mRNA-1
chr3_4 CDS 26252959 26253067 26252959 ID=Msa0496060-mRNA-1:cds;Parent=Msa0496060-mRNA-1
chr3_4 CDS 26253987 26254176 26253987 ID=Msa0496060-mRNA-1:cds;Parent=Msa0496060-mRNA-1
chr3_4 three_prime_UTR 26254177 26254278 26254177 ID=Msa0496060-mRNA-1:three_prime_utr;Parent=Msa0496060-mRNA-1
chr3_4 three_prime_UTR 26254299 26254407 26254299 ID=Msa0496060-mRNA-1:three_prime_utr;Parent=Msa0496060-mRNA-1
Gene Sequence

>Msa0496060

ATGGTAAAGAAAGAAGAATTTCTGAGAGAAAATGGTTTTGAGAAAGAAGGACAAGAAGAAGTCTCACGCAGTGACTTCCCTTCTGACTTCATCTTCGGAGTCGCCACTTCTGCTTATCAGATAGAAGGTGCTAGCAAGGAGGGTGGTAGAGGTCCTAGTATATGGGATGCCTATGCTTATACTGAAGGAAAAATACTCGACAAAAGCAATGGCGATGTAGCAGTTGATCATTATCATCGTTATAAGGAAGATGTTGATCTTATAGCCAAGTTGGGTTTCAACGCGTACAGATTTTCAATTTCTTGGTCTCGTATTTTCCCTGATGGCTTAGGAACCAATATCAATGCTGAAGGGATATCATTTTACAACAACATTATCAATGCTCTTCTTGAAAAAGGTATTCAACCTTTTGTAACTTTGTACCATTGGGATCTTCCACTGCATCTTGATGAGTCAATGGGAGGATGGTTGAATAAAAAAATCATAGAATATTTTGCAGTCTATGCAGATACTTGCTTTGCAAGTTTTGGCGATAGAGTGAAAAACTGGATTACTATTAACGAGCCCCTTCAAACCGCAGTTGGTGGGTATGATGCTGGAGTTAATGCTCCTGGAAGAAGTCAAAATAGATCAGTAGAACCATACTTAGCAGCACATCATCAAATCTTGGCCCATGCAGCAGCTGTTTCCATTTACCGAAGCAAGTACAAGGATAAGCAAGGGGGACAAGTGGGGCTGGTGGTAGACTCTGAATGGGCAGAGCCAAACTCTGATAAGATTGAAGATAAATCCGCTGCTGCGAGACACCTAGATTTTCGTCTTGGCTGGTTCTTGCATCCACTATATTATGGAGACTATCCTGAAGTTATGCGTGAACGACTTGGAGACCGACTTCCCAAATTCTCGGAGGAGGATAAAAAATTTCTTTTGAATTCTTTGGACTTCATTGGCCTAAATCACTATACAACGAGGTTAATTTCACATGTGACAGAAAGCACCGAAGAATGTCATTACGACAAGGCACAACAGCTGGACAGAATTGTTGAATGGGAAGGCGGGGAGCTCATTGGTGAGAAGGCAGCATCAGAGTGGCTATATGTTGTTCCTTGGGGTCTTCGGAAGATTATTAATTACATATCGCAAAAATATGCTGCACCGATATATGTCACCGAGAATGGTATGGATGATGAAGACAATGATAGCTTGCCACTAAATGAGATGCTAGATGACAAACTGCGAGTTCGCTATTACAAGGGATATCTTGCATCACTTGCGCAGGCTATAAAGGATGGAGCTGATGTGAGAGGACACTTTGCATGGTCATTACTGGACAACTTCGAATGGGCTCAAGGTTATACCAAACGTTTCGGATTGGTCTATGTAGATTACAAAAATGGACTCACCAGGCACCCAAAGTCTTCTGCGTATTGGTTTTCGCGGTTTCTTAAAGATGGGGCAAACAAGGGTAAAGAATAG
Protein sequence

>Msa0496060

MVKKEEFLRENGFEKEGQEEVSRSDFPSDFIFGVATSAYQIEGASKEGGRGPSIWDAYAYTEGKILDKSNGDVAVDHYHRYKEDVDLIAKLGFNAYRFSISWSRIFPDGLGTNINAEGISFYNNIINALLEKGIQPFVTLYHWDLPLHLDESMGGWLNKKIIEYFAVYADTCFASFGDRVKNWITINEPLQTAVGGYDAGVNAPGRSQNRSVEPYLAAHHQILAHAAAVSIYRSKYKDKQGGQVGLVVDSEWAEPNSDKIEDKSAAARHLDFRLGWFLHPLYYGDYPEVMRERLGDRLPKFSEEDKKFLLNSLDFIGLNHYTTRLISHVTESTEECHYDKAQQLDRIVEWEGGELIGEKAASEWLYVVPWGLRKIINYISQKYAAPIYVTENGMDDEDNDSLPLNEMLDDKLRVRYYKGYLASLAQAIKDGADVRGHFAWSLLDNFEWAQGYTKRFGLVYVDYKNGLTRHPKSSAYWFSRFLKDGANKGKE*