Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0822730 | AET00369.2 | 89.591 | 855 | 77 | 3 | 1 | 854 | 1 | 844 | 0.0 | 1566 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0822730 | sp|Q680C0|GDL62_ARATH | 26.627 | 338 | 214 | 9 | 35 | 352 | 22 | 345 | 4.85e-28 | 119 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0822730 | G7KD41 | 89.591 | 855 | 77 | 3 | 1 | 854 | 1 | 844 | 0.0 | 1566 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0822730 | 0.836154 | 1.104954e-56 | -8.615850e-47 |
| Msa0001940 | Msa0822730 | 0.815624 | 8.405890e-52 | -8.615850e-47 |
| Msa0001960 | Msa0822730 | 0.829335 | 5.453928e-55 | -8.615850e-47 |
| Msa0002580 | Msa0822730 | 0.843517 | 1.334779e-58 | -8.615850e-47 |
| Msa0010110 | Msa0822730 | 0.809047 | 2.294860e-50 | -8.615850e-47 |
| Msa0017670 | Msa0822730 | 0.832281 | 1.033986e-55 | -8.615850e-47 |
| Msa0017930 | Msa0822730 | 0.824414 | 8.177345e-54 | -8.615850e-47 |
| Msa0017950 | Msa0822730 | 0.820685 | 6.019613e-53 | -8.615850e-47 |
| Msa0034810 | Msa0822730 | 0.801006 | 1.103641e-48 | -8.615850e-47 |
| Msa0059840 | Msa0822730 | 0.802677 | 5.008081e-49 | -8.615850e-47 |
| Msa0077340 | Msa0822730 | 0.834202 | 3.434421e-56 | -8.615850e-47 |
| Msa0098040 | Msa0822730 | 0.829599 | 4.705090e-55 | -8.615850e-47 |
| Msa0101500 | Msa0822730 | -0.800194 | 1.615568e-48 | -8.615850e-47 |
| Msa0104670 | Msa0822730 | 0.821610 | 3.684766e-53 | -8.615850e-47 |
| Msa0611210 | Msa0822730 | 0.833540 | 5.028511e-56 | -8.615850e-47 |
| Msa0651550 | Msa0822730 | 0.814265 | 1.682534e-51 | -8.615850e-47 |
| Msa0674480 | Msa0822730 | 0.824320 | 8.603368e-54 | -8.615850e-47 |
| Msa0695270 | Msa0822730 | 0.802733 | 4.876599e-49 | -8.615850e-47 |
| Msa0741220 | Msa0822730 | 0.847189 | 1.353509e-59 | -8.615850e-47 |
| Msa0741650 | Msa0822730 | 0.861398 | 1.055072e-63 | -8.615850e-47 |
| Msa0752450 | Msa0822730 | 0.826346 | 2.853877e-54 | -8.615850e-47 |
| Msa0780270 | Msa0822730 | 0.812389 | 4.344606e-51 | -8.615850e-47 |
| Msa0780570 | Msa0822730 | 0.824005 | 1.020126e-53 | -8.615850e-47 |
| Msa0786370 | Msa0822730 | 0.934340 | 4.697368e-96 | -8.615850e-47 |
| Msa0792370 | Msa0822730 | 0.810641 | 1.042062e-50 | -8.615850e-47 |
| Msa0795750 | Msa0822730 | 0.815751 | 7.872512e-52 | -8.615850e-47 |
| Msa0795870 | Msa0822730 | 0.818413 | 1.985421e-52 | -8.615850e-47 |
| Msa0821780 | Msa0822730 | 0.805133 | 1.546204e-49 | -8.615850e-47 |
| Msa0822730 | Msa0829300 | 0.838405 | 2.933166e-57 | -8.615850e-47 |
| Msa0822730 | Msa0829330 | 0.841035 | 6.063902e-58 | -8.615850e-47 |
| Msa0822730 | Msa0833530 | 0.831587 | 1.534337e-55 | -8.615850e-47 |
| Msa0822730 | Msa0833650 | 0.819945 | 8.898249e-53 | -8.615850e-47 |
| Msa0822730 | Msa0861850 | 0.807282 | 5.454336e-50 | -8.615850e-47 |
| Msa0822730 | Msa0869280 | 0.806939 | 6.445929e-50 | -8.615850e-47 |
| Msa0822730 | Msa0894790 | 0.813333 | 2.698833e-51 | -8.615850e-47 |
| Msa0822730 | Msa0933760 | 0.822847 | 1.902987e-53 | -8.615850e-47 |
| Msa0822730 | Msa0967870 | 0.814543 | 1.460419e-51 | -8.615850e-47 |
| Msa0822730 | Msa1021590 | 0.829669 | 4.522005e-55 | -8.615850e-47 |
| Msa0822730 | Msa1044680 | 0.831264 | 1.842332e-55 | -8.615850e-47 |
| Msa0822730 | Msa1101880 | 0.827281 | 1.705882e-54 | -8.615850e-47 |
| Msa0822730 | Msa1105640 | 0.826946 | 2.052077e-54 | -8.615850e-47 |
| Msa0822730 | Msa1111380 | 0.804803 | 1.812591e-49 | -8.615850e-47 |
| Msa0822730 | Msa1132840 | 0.819751 | 9.850766e-53 | -8.615850e-47 |
| Msa0822730 | Msa1148960 | 0.807833 | 4.166282e-50 | -8.615850e-47 |
| Msa0822730 | Msa1155170 | -0.807590 | 4.692973e-50 | -8.615850e-47 |
| Msa0822730 | Msa1160920 | 0.801334 | 9.457765e-49 | -8.615850e-47 |
| Msa0822730 | Msa1205280 | 0.801133 | 1.039813e-48 | -8.615850e-47 |
| Msa0822730 | Msa1208950 | 0.811971 | 5.360496e-51 | -8.615850e-47 |
| Msa0822730 | Msa1225860 | -0.830158 | 3.437184e-55 | -8.615850e-47 |
| Msa0822730 | Msa1265650 | 0.846079 | 2.720484e-59 | -8.615850e-47 |
| Msa0822730 | Msa1297230 | 0.806921 | 6.504328e-50 | -8.615850e-47 |
| Msa0822730 | Msa1303560 | 0.843703 | 1.190678e-58 | -8.615850e-47 |
| Msa0822730 | Msa1303650 | 0.839194 | 1.833452e-57 | -8.615850e-47 |
| Msa0822730 | Msa1308220 | 0.829996 | 3.764343e-55 | -8.615850e-47 |
| Msa0822730 | Msa1325410 | -0.817831 | 2.688245e-52 | -8.615850e-47 |
| Msa0822730 | Msa1340200 | 0.834655 | 2.643276e-56 | -8.615850e-47 |
| Msa0822730 | Msa1382300 | 0.843674 | 1.211507e-58 | -8.615850e-47 |
| Msa0822730 | Msa1393780 | 0.808606 | 2.851928e-50 | -8.615850e-47 |
| Msa0822730 | Msa1405460 | 0.840041 | 1.104120e-57 | -8.615850e-47 |
| Msa0822730 | Msa1414640 | 0.862039 | 6.717631e-64 | -8.615850e-47 |
| Msa0822730 | Msa1415540 | 0.800504 | 1.397541e-48 | -8.615850e-47 |
| Msa0822730 | Msa1464090 | 0.834684 | 2.599305e-56 | -8.615850e-47 |
| Msa0225100 | Msa0822730 | 0.824771 | 6.739730e-54 | -8.615850e-47 |
| Msa0225860 | Msa0822730 | 0.809018 | 2.327700e-50 | -8.615850e-47 |
| Msa0230800 | Msa0822730 | 0.819411 | 1.178211e-52 | -8.615850e-47 |
| Msa0230870 | Msa0822730 | 0.803072 | 4.149493e-49 | -8.615850e-47 |
| Msa0234090 | Msa0822730 | 0.800769 | 1.233702e-48 | -8.615850e-47 |
| Msa0388340 | Msa0822730 | 0.802486 | 5.485021e-49 | -8.615850e-47 |
| Msa0405680 | Msa0822730 | 0.810600 | 1.063642e-50 | -8.615850e-47 |
| Msa0426530 | Msa0822730 | 0.805964 | 1.034910e-49 | -8.615850e-47 |
| Msa0428370 | Msa0822730 | 0.809572 | 1.771123e-50 | -8.615850e-47 |
| Msa0430300 | Msa0822730 | 0.804851 | 1.771659e-49 | -8.615850e-47 |
| Msa0436910 | Msa0822730 | 0.841299 | 5.168525e-58 | -8.615850e-47 |
| Msa0472950 | Msa0822730 | 0.814982 | 1.167137e-51 | -8.615850e-47 |
| Msa0474730 | Msa0822730 | 0.808301 | 3.311869e-50 | -8.615850e-47 |
| Msa0240900 | Msa0822730 | 0.823296 | 1.494966e-53 | -8.615850e-47 |
| Msa0244640 | Msa0822730 | 0.837472 | 5.095410e-57 | -8.615850e-47 |
| Msa0266180 | Msa0822730 | 0.835928 | 1.260920e-56 | -8.615850e-47 |
| Msa0270340 | Msa0822730 | 0.811781 | 5.897783e-51 | -8.615850e-47 |
| Msa0274980 | Msa0822730 | 0.813140 | 2.976469e-51 | -8.615850e-47 |
| Msa0283330 | Msa0822730 | 0.832447 | 9.404739e-56 | -8.615850e-47 |
| Msa0287740 | Msa0822730 | 0.824971 | 6.043642e-54 | -8.615850e-47 |
| Msa0298470 | Msa0822730 | 0.811076 | 8.387967e-51 | -8.615850e-47 |
| Msa0307670 | Msa0822730 | 0.810667 | 1.028347e-50 | -8.615850e-47 |
| Msa0320500 | Msa0822730 | 0.806417 | 8.309549e-50 | -8.615850e-47 |
| Msa0321620 | Msa0822730 | 0.862082 | 6.520422e-64 | -8.615850e-47 |
| Msa0517250 | Msa0822730 | 0.817498 | 3.197036e-52 | -8.615850e-47 |
| Msa0519820 | Msa0822730 | 0.805102 | 1.569477e-49 | -8.615850e-47 |
| Msa0519830 | Msa0822730 | 0.810883 | 9.237691e-51 | -8.615850e-47 |
| Msa0528570 | Msa0822730 | 0.802280 | 6.046018e-49 | -8.615850e-47 |
| Msa0529030 | Msa0822730 | 0.838504 | 2.764546e-57 | -8.615850e-47 |
| Msa0543560 | Msa0822730 | 0.810404 | 1.172418e-50 | -8.615850e-47 |
| Msa0548470 | Msa0822730 | 0.803006 | 4.283737e-49 | -8.615850e-47 |
| Msa0580370 | Msa0822730 | 0.818295 | 2.112361e-52 | -8.615850e-47 |
| Msa0581470 | Msa0822730 | 0.815761 | 7.834979e-52 | -8.615850e-47 |
| Msa0583360 | Msa0822730 | -0.827465 | 1.541024e-54 | -8.615850e-47 |
| Msa0587620 | Msa0822730 | 0.806887 | 6.611122e-50 | -8.615850e-47 |
| Msa0599420 | Msa0822730 | 0.800338 | 1.510596e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0822730 | MtrunA17_Chr5g0443021 | 91.417 | 501 | 43 | 0 | 1 | 501 | 1 | 501 | 0.0 | 957 |
| Msa0822730 | MtrunA17_Chr5g0443021 | 39.333 | 300 | 157 | 8 | 379 | 656 | 205 | 501 | 8.08e-46 | 172 |
| Msa0822730 | MtrunA17_Chr5g0443021 | 39.516 | 248 | 121 | 11 | 543 | 767 | 211 | 452 | 8.20e-37 | 145 |
| Msa0822730 | MtrunA17_Chr5g0443031 | 89.644 | 309 | 30 | 2 | 547 | 854 | 1 | 308 | 0.0 | 557 |
| Msa0822730 | MtrunA17_Chr5g0443031 | 50.226 | 221 | 101 | 5 | 395 | 609 | 6 | 223 | 2.89e-56 | 196 |
| Msa0822730 | MtrunA17_Chr5g0443031 | 36.777 | 242 | 122 | 8 | 220 | 452 | 3 | 222 | 3.06e-34 | 133 |
| Msa0822730 | MtrunA17_Chr5g0443011 | 81.851 | 281 | 46 | 1 | 80 | 360 | 14 | 289 | 1.35e-167 | 487 |
| Msa0822730 | MtrunA17_Chr5g0443011 | 42.857 | 147 | 66 | 5 | 543 | 673 | 145 | 289 | 2.60e-24 | 104 |
| Msa0822730 | MtrunA17_Chr5g0443011 | 38.710 | 155 | 80 | 4 | 379 | 520 | 139 | 291 | 1.93e-18 | 87.0 |
| Msa0822730 | MtrunA17_Chr5g0442991 | 61.140 | 386 | 130 | 7 | 1 | 377 | 1 | 375 | 1.26e-149 | 445 |
| Msa0822730 | MtrunA17_Chr5g0442991 | 48.503 | 167 | 62 | 6 | 539 | 686 | 210 | 371 | 1.90e-32 | 130 |
| Msa0822730 | MtrunA17_Chr5g0442991 | 41.667 | 168 | 79 | 5 | 379 | 531 | 208 | 371 | 1.11e-25 | 110 |
| Msa0822730 | MtrunA17_Chr3g0096121 | 59.563 | 366 | 132 | 6 | 16 | 374 | 44 | 400 | 9.35e-135 | 407 |
| Msa0822730 | MtrunA17_Chr3g0096121 | 44.785 | 163 | 66 | 6 | 543 | 684 | 238 | 397 | 5.67e-26 | 111 |
| Msa0822730 | MtrunA17_Chr3g0096121 | 34.524 | 168 | 89 | 4 | 379 | 528 | 232 | 396 | 4.09e-17 | 84.7 |
| Msa0822730 | MtrunA17_Chr8g0388281 | 30.499 | 341 | 192 | 6 | 35 | 352 | 21 | 339 | 2.33e-38 | 146 |
| Msa0822730 | MtrunA17_Chr5g0410331 | 30.612 | 343 | 187 | 8 | 34 | 350 | 20 | 337 | 4.71e-34 | 134 |
| Msa0822730 | MtrunA17_Chr5g0396551 | 27.907 | 344 | 199 | 8 | 34 | 352 | 20 | 339 | 1.87e-31 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0822730 | AT5G50890.1 | 54.444 | 360 | 153 | 7 | 16 | 368 | 49 | 404 | 2.27e-124 | 381 |
| Msa0822730 | AT5G50890.1 | 37.059 | 170 | 80 | 9 | 539 | 683 | 239 | 406 | 3.56e-15 | 79.0 |
| Msa0822730 | AT5G50890.1 | 32.353 | 170 | 95 | 6 | 379 | 528 | 237 | 406 | 5.95e-13 | 72.4 |
| Msa0822730 | AT5G24230.1 | 27.841 | 352 | 197 | 7 | 22 | 343 | 30 | 354 | 6.07e-31 | 125 |
| Msa0822730 | AT5G24230.3 | 27.841 | 352 | 197 | 7 | 22 | 343 | 30 | 354 | 6.07e-31 | 125 |
| Msa0822730 | AT5G24230.2 | 27.841 | 352 | 197 | 7 | 22 | 343 | 30 | 354 | 6.07e-31 | 125 |
| Msa0822730 | AT2G05260.1 | 27.714 | 350 | 198 | 8 | 35 | 349 | 21 | 350 | 2.03e-30 | 124 |
| Msa0822730 | AT2G05260.2 | 37.363 | 182 | 100 | 3 | 35 | 212 | 21 | 192 | 4.47e-30 | 121 |
| Msa0822730 | AT4G10955.2 | 26.627 | 338 | 214 | 9 | 35 | 352 | 22 | 345 | 4.93e-29 | 119 |
| Msa0822730 | AT4G10955.1 | 26.627 | 338 | 214 | 9 | 35 | 352 | 22 | 345 | 4.93e-29 | 119 |
| Msa0822730 | AT5G24220.1 | 25.485 | 361 | 218 | 7 | 12 | 346 | 15 | 350 | 7.62e-29 | 119 |
| Msa0822730 | AT5G24180.1 | 26.075 | 372 | 204 | 12 | 13 | 349 | 17 | 352 | 1.37e-25 | 110 |
| Msa0822730 | AT5G24200.2 | 29.107 | 347 | 174 | 9 | 35 | 344 | 21 | 332 | 5.06e-24 | 104 |
| Msa0822730 | AT5G24200.3 | 29.107 | 347 | 174 | 9 | 35 | 344 | 21 | 332 | 5.06e-24 | 104 |
| Msa0822730 | AT5G24200.1 | 29.107 | 347 | 174 | 9 | 35 | 344 | 21 | 332 | 5.06e-24 | 104 |
| Msa0822730 | AT5G24210.2 | 28.571 | 336 | 182 | 11 | 40 | 344 | 30 | 338 | 6.19e-22 | 99.0 |
| Msa0822730 | AT5G24210.3 | 28.571 | 336 | 182 | 11 | 40 | 344 | 30 | 338 | 6.19e-22 | 99.0 |
| Msa0822730 | AT5G24210.1 | 28.571 | 336 | 182 | 11 | 40 | 344 | 30 | 338 | 6.19e-22 | 99.0 |
Find 203 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAATAATGTTTCTTTATT+TGG | 0.078578 | 5_3:-61127033 | None:intergenic |
| GGCTTGAAGGATGCTGCTTT+TGG | 0.189077 | 5_3:+61130514 | Msa0822730:CDS |
| CATGAGCTTCGAGAAATTTC+TGG | 0.197329 | 5_3:-61129055 | None:intergenic |
| AACATTATTACATAGGAAAT+TGG | 0.224883 | 5_3:+61127044 | Msa0822730:five_prime_UTR |
| GGGGCACCAATTGGTTTAAA+TGG | 0.231548 | 5_3:-61128396 | None:intergenic |
| ACATGATCACAACTCTTAAT+TGG | 0.236822 | 5_3:+61127145 | Msa0822730:CDS |
| TTGATACTTCTTAAAGCTAT+TGG | 0.245387 | 5_3:-61130772 | None:intergenic |
| AGTTGGATACCTTCATTATC+TGG | 0.269699 | 5_3:+61130493 | Msa0822730:CDS |
| GCTATGAGCCTTGGAAATAT+TGG | 0.270906 | 5_3:+61128705 | Msa0822730:CDS |
| CAGAAAAGGAAGAATTTATA+TGG | 0.274727 | 5_3:+61129714 | Msa0822730:CDS |
| AAGAAATCTCTGCTGTTCTT+TGG | 0.275359 | 5_3:-61129990 | None:intergenic |
| GCTTGAAGGATACCGGTTAT+TGG | 0.275423 | 5_3:+61129381 | Msa0822730:CDS |
| TGCATTGGAGGGCATTCTTT+AGG | 0.288580 | 5_3:+61128591 | Msa0822730:CDS |
| CCGGTTATTGGGTGTGGAAA+TGG | 0.295956 | 5_3:+61129393 | Msa0822730:CDS |
| GATGGTTAGAAAGGAGAATA+TGG | 0.298618 | 5_3:+61129460 | Msa0822730:CDS |
| CATTGTTAAGATTGAAAACT+TGG | 0.301924 | 5_3:-61130684 | None:intergenic |
| CATCGCCAATGTGGAGAATA+TGG | 0.306203 | 5_3:+61128980 | Msa0822730:CDS |
| GCCTCGTTTATCGCGCTTGA+TGG | 0.306679 | 5_3:+61128857 | Msa0822730:CDS |
| TGCCTTCACTGTCAGGCCTC+AGG | 0.308352 | 5_3:+61130311 | Msa0822730:CDS |
| GAGAAGTGACATATTATGTT+TGG | 0.311865 | 5_3:+61129249 | Msa0822730:CDS |
| CTTCCTTGCAGCTCATGGTT+TGG | 0.319831 | 5_3:+61129541 | Msa0822730:CDS |
| CTTGAAGGATACCGGTTATT+GGG | 0.330056 | 5_3:+61129382 | Msa0822730:CDS |
| CATTCTTTAGGTGCTGGATT+TGG | 0.332747 | 5_3:+61128603 | Msa0822730:CDS |
| GCTTCATTGTGCTCATTAGA+AGG | 0.334639 | 5_3:-61129005 | None:intergenic |
| CAATTGGACCACGGCATAAC+CGG | 0.343829 | 5_3:-61130338 | None:intergenic |
| TGCTGAAGTTCTAAATCATT+TGG | 0.347676 | 5_3:-61129575 | None:intergenic |
| GGTTTGATACCTCAGTTATC+TGG | 0.350558 | 5_3:+61129827 | Msa0822730:CDS |
| TTCAAACCATTTAAACCAAT+TGG | 0.351269 | 5_3:+61128390 | Msa0822730:CDS |
| AGCTGGGTGCCTTCACTGTC+AGG | 0.364707 | 5_3:+61130304 | Msa0822730:CDS |
| TATCCTTCAAGCTAGATAAC+TGG | 0.365811 | 5_3:-61129370 | None:intergenic |
| TCAAAATCTCTTCGCATTGT+AGG | 0.366852 | 5_3:-61128459 | None:intergenic |
| CGCTTGATGGATGCTTGTTT+AGG | 0.369232 | 5_3:+61128870 | Msa0822730:CDS |
| ATGAGTTTGCTATCATGAAT+AGG | 0.374508 | 5_3:-61130064 | None:intergenic |
| GTGGCTAATGAAACATAATA+TGG | 0.377198 | 5_3:-61129209 | None:intergenic |
| TTTATGTTAACAAGAATGAT+TGG | 0.381468 | 5_3:+61128916 | Msa0822730:CDS |
| TCTTCAAGTGGGAAAGGAAT+TGG | 0.386231 | 5_3:+61128626 | Msa0822730:CDS |
| TGTTGCTTGGGAATGCTTGA+AGG | 0.386263 | 5_3:+61128497 | Msa0822730:CDS |
| GACTTCAGGTATAAGTTTGA+TGG | 0.395063 | 5_3:+61129337 | Msa0822730:CDS |
| CAAATTTGTTTACTGTCTCC+AGG | 0.397324 | 5_3:+61129507 | Msa0822730:CDS |
| CAGGTATAAGTTTGATGGGT+TGG | 0.400012 | 5_3:+61129342 | Msa0822730:CDS |
| TGTACTTTCTTGAACTTGAT+AGG | 0.401899 | 5_3:+61128220 | Msa0822730:CDS |
| GATGATTTACTTTCAACTAA+AGG | 0.402020 | 5_3:-61127111 | None:intergenic |
| TGCCATGTGTCTTGCAGAAA+AGG | 0.402782 | 5_3:+61129700 | Msa0822730:CDS |
| TGTTACGTCCCAAGGTGTAT+TGG | 0.407057 | 5_3:-61130113 | None:intergenic |
| GCTTGAAGAATGTAGCTTAT+CGG | 0.408674 | 5_3:+61129849 | Msa0822730:CDS |
| CGGTTATTGGGTGTGGAAAT+GGG | 0.414784 | 5_3:+61129394 | Msa0822730:CDS |
| TAAATAGAAGTGAGGTGAAA+TGG | 0.417307 | 5_3:+61130812 | Msa0822730:three_prime_UTR |
| CTTTCTTGAACTTGATAGGC+AGG | 0.417473 | 5_3:+61128224 | Msa0822730:CDS |
| GAACACTGGTACACCTTCTC+AGG | 0.421632 | 5_3:+61129169 | Msa0822730:CDS |
| CAAATGGGAAGTGAAATAAA+AGG | 0.421987 | 5_3:-61130148 | None:intergenic |
| CGGTTATGCCGTGGTCCAAT+TGG | 0.422848 | 5_3:+61130339 | Msa0822730:CDS |
| GGAGGGCATTCTTTAGGTGC+TGG | 0.423182 | 5_3:+61128597 | Msa0822730:CDS |
| TTGTGTGGGCTTATACTTGA+AGG | 0.432168 | 5_3:-61128292 | None:intergenic |
| TCTGAGTGCTAAAACAGCTC+TGG | 0.433869 | 5_3:-61128418 | None:intergenic |
| GTTTCACTTGCTATGAGCCT+TGG | 0.434142 | 5_3:+61128696 | Msa0822730:CDS |
| CTCTTGTCAGCATACAGATA+TGG | 0.434564 | 5_3:-61130553 | None:intergenic |
| CCGTGGTCCAATTGGTTCCT+AGG | 0.434775 | 5_3:+61130347 | Msa0822730:CDS |
| TACTTCCGGTGTTGGTTTGA+AGG | 0.434795 | 5_3:+61129805 | Msa0822730:CDS |
| GTTTAAGTTCTTAAAACTCT+AGG | 0.441325 | 5_3:+61130739 | Msa0822730:three_prime_UTR |
| AATTGGTTCCTAGGCAACTT+AGG | 0.442386 | 5_3:+61130356 | Msa0822730:CDS |
| CCATTTCCACACCCAATAAC+CGG | 0.442745 | 5_3:-61129393 | None:intergenic |
| TCTGATACTATCGAGACAAA+TGG | 0.443227 | 5_3:-61130164 | None:intergenic |
| TTTCGGTGCAATATTTGAAT+GGG | 0.446693 | 5_3:+61128344 | Msa0822730:CDS |
| AGCTTATCGGGTGTGCGAAT+GGG | 0.447934 | 5_3:+61129862 | Msa0822730:CDS |
| TCCTTCAAGCAGTGAATCTC+GGG | 0.448588 | 5_3:+61129763 | Msa0822730:CDS |
| CTGCTCACGGCTTGCAACAA+TGG | 0.449740 | 5_3:+61130014 | Msa0822730:CDS |
| CTTTGTGATAACATACAACT+TGG | 0.450055 | 5_3:-61129027 | None:intergenic |
| ACCTTCATTATCTGGCTTGA+AGG | 0.450507 | 5_3:+61130501 | Msa0822730:CDS |
| AAACTCATAAGCAGGCGAAT+TGG | 0.451049 | 5_3:+61130079 | Msa0822730:CDS |
| ACCCGAGATTCACTGCTTGA+AGG | 0.451306 | 5_3:-61129764 | None:intergenic |
| CAAAATCTCTTCGCATTGTA+GGG | 0.452318 | 5_3:-61128458 | None:intergenic |
| GTTGCTCCAGCCACGAGCCT+TGG | 0.458204 | 5_3:+61130391 | Msa0822730:CDS |
| CTGAACTTCCTTGCAGCTCA+TGG | 0.458712 | 5_3:+61129536 | Msa0822730:CDS |
| CTTGAAGAATGTAGCTTATC+GGG | 0.459208 | 5_3:+61129850 | Msa0822730:CDS |
| CAGAAATTTCTCGAAGCTCA+TGG | 0.459672 | 5_3:+61129056 | Msa0822730:CDS |
| TAGCTTATCGGGTGTGCGAA+TGG | 0.460950 | 5_3:+61129861 | Msa0822730:CDS |
| TTCCTTCAAGCAGTGAATCT+CGG | 0.460978 | 5_3:+61129762 | Msa0822730:CDS |
| CAAGTGTACCATTGAAGAGC+TGG | 0.466299 | 5_3:+61130287 | Msa0822730:CDS |
| CTTGTTCTTCAGTATTTCCA+AGG | 0.467987 | 5_3:-61130408 | None:intergenic |
| GTATTTCCAAGGCTCGTGGC+TGG | 0.470007 | 5_3:-61130397 | None:intergenic |
| CAGAGATTTCTTTCTGCTCA+CGG | 0.476534 | 5_3:+61130001 | Msa0822730:CDS |
| TCTCTCTTGTTCCATCGGTA+TGG | 0.476992 | 5_3:-61128956 | None:intergenic |
| TGCTGAAGTTCTGCATCACT+TGG | 0.477143 | 5_3:-61130040 | None:intergenic |
| TTTATACACCAATACACCTT+GGG | 0.480101 | 5_3:+61130105 | Msa0822730:CDS |
| TAAGTTGCCTAGGAACCAAT+TGG | 0.481654 | 5_3:-61130354 | None:intergenic |
| ACTTGAGGTTCACTACTTGA+AGG | 0.482250 | 5_3:-61128771 | None:intergenic |
| CTGAGTGCTAAAACAGCTCT+GGG | 0.484719 | 5_3:-61128417 | None:intergenic |
| AGGATACCGGTTATTGGGTG+TGG | 0.485209 | 5_3:+61129387 | Msa0822730:CDS |
| CTGTCAGGCCTCAGGGATAC+CGG | 0.485436 | 5_3:+61130319 | Msa0822730:CDS |
| TTCATCAATCAATATTTGTG+TGG | 0.487447 | 5_3:-61128307 | None:intergenic |
| GCCTTCACTGTCAGGCCTCA+GGG | 0.487725 | 5_3:+61130312 | Msa0822730:CDS |
| TCTATACACCGGTTCACCTT+GGG | 0.488752 | 5_3:+61129640 | Msa0822730:CDS |
| TGTGAGATTTAAAGTAGCTA+TGG | 0.489698 | 5_3:+61128524 | Msa0822730:CDS |
| GGGACTTCATTGATTCTAGC+TGG | 0.493150 | 5_3:+61127169 | Msa0822730:CDS |
| GGTTACAATACTTCCGGTGT+TGG | 0.494372 | 5_3:+61129797 | Msa0822730:CDS |
| AGCCATTGCAAGTCTTATAC+AGG | 0.495279 | 5_3:+61128194 | Msa0822730:CDS |
| GATGTTCTCTCTTGTTCCAT+CGG | 0.496658 | 5_3:-61128961 | None:intergenic |
| TTATCTAGCTTGAAGGATAC+CGG | 0.497729 | 5_3:+61129374 | Msa0822730:CDS |
| ACCCCAGTTATCTAGCTTGA+AGG | 0.497805 | 5_3:+61129367 | Msa0822730:CDS |
| CTCTATACACCGGTTCACCT+TGG | 0.500163 | 5_3:+61129639 | Msa0822730:CDS |
| ACTTCCGGTGTTGGTTTGAA+GGG | 0.501655 | 5_3:+61129806 | Msa0822730:CDS |
| CTGATACTATCGAGACAAAT+GGG | 0.503813 | 5_3:-61130163 | None:intergenic |
| TCATCAATCAATATTTGTGT+GGG | 0.503887 | 5_3:-61128306 | None:intergenic |
| GATAAATACCTAAGTTGCCT+AGG | 0.506284 | 5_3:-61130364 | None:intergenic |
| AAGCTCATGGCTTGAAGCAA+TGG | 0.508729 | 5_3:+61129069 | Msa0822730:CDS |
| ACAAGACTTCATTCCAGAGT+TGG | 0.509009 | 5_3:+61130476 | Msa0822730:CDS |
| AGCAGAAATGTATGCATTGG+AGG | 0.512323 | 5_3:+61128579 | Msa0822730:CDS |
| ACTTCAGGTATAAGTTTGAT+GGG | 0.514160 | 5_3:+61129338 | Msa0822730:CDS |
| GAAGGCACCCAGCTCTTCAA+TGG | 0.515579 | 5_3:-61130295 | None:intergenic |
| AGGGTCCTTTGCAATAACAT+AGG | 0.518536 | 5_3:+61130614 | Msa0822730:exon |
| AATGATGGTTACAATACTTC+CGG | 0.524409 | 5_3:+61129791 | Msa0822730:CDS |
| TTCACTGCTTGAAGGAAGCA+TGG | 0.524986 | 5_3:-61129756 | None:intergenic |
| CTTTATACACCAATACACCT+TGG | 0.524989 | 5_3:+61130104 | Msa0822730:CDS |
| TTAAATCCATTGTTAACTTG+AGG | 0.526347 | 5_3:-61130642 | None:intergenic |
| TGTGTGCCTCATCATATAAG+TGG | 0.526824 | 5_3:+61129284 | Msa0822730:CDS |
| GGAAGCAGAAATGTATGCAT+TGG | 0.529257 | 5_3:+61128576 | Msa0822730:CDS |
| CAGCTCATGGTTTGGAACAA+TGG | 0.530134 | 5_3:+61129549 | Msa0822730:CDS |
| ATAATGAAGGTATCCAACTC+TGG | 0.532180 | 5_3:-61130489 | None:intergenic |
| CACAGAAGAGGAGGTTGACA+AGG | 0.533386 | 5_3:+61129916 | Msa0822730:CDS |
| TGCTCACAAATTTGCTATTG+CGG | 0.533627 | 5_3:-61129130 | None:intergenic |
| GTGCAATATTTGAATGGGAT+CGG | 0.533820 | 5_3:+61128349 | Msa0822730:CDS |
| ATCCTTCAAGCTAGATAACT+GGG | 0.536251 | 5_3:-61129369 | None:intergenic |
| ATAAAGAAACATTATTACAT+AGG | 0.537365 | 5_3:+61127037 | Msa0822730:five_prime_UTR |
| GAATCTCGGGTGCTCAATGA+TGG | 0.537378 | 5_3:+61129776 | Msa0822730:CDS |
| AACGACGGACAAATGACTTC+AGG | 0.539145 | 5_3:+61129323 | Msa0822730:CDS |
| ATGATAGCAAACTCATAAGC+AGG | 0.543690 | 5_3:+61130071 | Msa0822730:CDS |
| AGCATTCCCAAGCAACAAAA+CGG | 0.544874 | 5_3:-61128491 | None:intergenic |
| CAACTTAAATCTTTGAACAC+TGG | 0.546107 | 5_3:+61129155 | Msa0822730:CDS |
| GTTTGCCATCGTTGTAACAA+AGG | 0.549344 | 5_3:-61127073 | None:intergenic |
| TGTCGTGAAGATGGTTAGAA+AGG | 0.551376 | 5_3:+61129451 | Msa0822730:CDS |
| TTCAGTATTTCCAAGGCTCG+TGG | 0.551596 | 5_3:-61130401 | None:intergenic |
| TGCTGGATTTGGTCTTCAAG+TGG | 0.552254 | 5_3:+61128614 | Msa0822730:CDS |
| TCTTTCAAGTAGTGAAACTC+AGG | 0.553879 | 5_3:+61130234 | Msa0822730:CDS |
| AAGGAAGTTCAGTTGTTCCC+TGG | 0.555227 | 5_3:-61129525 | None:intergenic |
| TGTGTGGGCTTATACTTGAA+GGG | 0.556397 | 5_3:-61128291 | None:intergenic |
| GTGATGGAAAACTCATAAGA+AGG | 0.559123 | 5_3:+61129606 | Msa0822730:CDS |
| AAATCAGTGTATGATACGTA+TGG | 0.561870 | 5_3:+61128555 | Msa0822730:CDS |
| TAGAAAAGTACTACCTGAGA+AGG | 0.565700 | 5_3:-61129182 | None:intergenic |
| AAATTTGTTTACTGTCTCCA+GGG | 0.565902 | 5_3:+61129508 | Msa0822730:CDS |
| ATTTGGTCTTCAAGTGGGAA+AGG | 0.566357 | 5_3:+61128620 | Msa0822730:CDS |
| TGATCACAACTCTTAATTGG+AGG | 0.567969 | 5_3:+61127148 | Msa0822730:CDS |
| TCTAATATTTATGTGACGAG+TGG | 0.571796 | 5_3:-61129228 | None:intergenic |
| CTCACGGCTTGCAACAATGG+TGG | 0.572765 | 5_3:+61130017 | Msa0822730:CDS |
| GGCAAAGGAAATGATTAATG+TGG | 0.573590 | 5_3:+61128647 | Msa0822730:CDS |
| CAAGAATTGTGGCACAGAAG+AGG | 0.573673 | 5_3:+61129904 | Msa0822730:CDS |
| GGGTCCTTTGCAATAACATA+GGG | 0.575469 | 5_3:+61130615 | Msa0822730:exon |
| CTGTATGCTAATGAGAATGT+TGG | 0.580429 | 5_3:+61129425 | Msa0822730:CDS |
| TCCTTCAAGCCAGATAATGA+AGG | 0.583160 | 5_3:-61130502 | None:intergenic |
| TGTTGGCGCTGTCGTGAAGA+TGG | 0.583445 | 5_3:+61129442 | Msa0822730:CDS |
| GCTGGATTTGGTCTTCAAGT+GGG | 0.586198 | 5_3:+61128615 | Msa0822730:CDS |
| GGAGGTTGACAAGGAGAATG+TGG | 0.588267 | 5_3:+61129925 | Msa0822730:CDS |
| GATTTACCACTTATATGATG+AGG | 0.590671 | 5_3:-61129290 | None:intergenic |
| TGGGTTCCTCATCTGTATGT+TGG | 0.593149 | 5_3:+61129881 | Msa0822730:CDS |
| GATCACAACTCTTAATTGGA+GGG | 0.594082 | 5_3:+61127149 | Msa0822730:CDS |
| CTTCAGCAAACTATCCGTGA+TGG | 0.594715 | 5_3:+61129590 | Msa0822730:CDS |
| GCTCGTGGCTGGAGCAACAA+AGG | 0.597100 | 5_3:-61130386 | None:intergenic |
| TATTGATTGATGAAAGAGAT+GGG | 0.597435 | 5_3:+61128316 | Msa0822730:CDS |
| CTCATGGCTTGAAGCAATGG+TGG | 0.599726 | 5_3:+61129072 | Msa0822730:CDS |
| AAGTGTACCATTGAAGAGCT+GGG | 0.601631 | 5_3:+61130288 | Msa0822730:CDS |
| GAGAATATGGATCATGAAGA+CGG | 0.602100 | 5_3:+61129473 | Msa0822730:CDS |
| TGTTCCCTATGTTATTGCAA+AGG | 0.602792 | 5_3:-61130619 | None:intergenic |
| CTGTATGTTGGCAAGAATTG+TGG | 0.603147 | 5_3:+61129893 | Msa0822730:CDS |
| GATTTACTTTCAACTAAAGG+AGG | 0.604115 | 5_3:-61127108 | None:intergenic |
| TTCTCATTAGCATACAGAAG+AGG | 0.607136 | 5_3:-61129419 | None:intergenic |
| ACCTCAAGTCAGCATTGATG+TGG | 0.612184 | 5_3:+61128785 | Msa0822730:CDS |
| AGGATCCATATTCTCCACAT+TGG | 0.613667 | 5_3:-61128985 | None:intergenic |
| CAGGGATACCGGTTATGCCG+TGG | 0.613998 | 5_3:+61130330 | Msa0822730:CDS |
| TGCCTGTATAAGACTTGCAA+TGG | 0.616517 | 5_3:-61128196 | None:intergenic |
| GATGGTTGACAAAGAGAACA+AGG | 0.618389 | 5_3:+61130594 | Msa0822730:CDS |
| TGGTGGAAAAGACGACAAGA+TGG | 0.619277 | 5_3:+61130576 | Msa0822730:CDS |
| GAATTGTGGCACAGAAGAGG+AGG | 0.621076 | 5_3:+61129907 | Msa0822730:CDS |
| TCCACATCAATGCTGACTTG+AGG | 0.623615 | 5_3:-61128786 | None:intergenic |
| AAGCAATGGTGGTCAAGTGA+CGG | 0.626051 | 5_3:+61129083 | Msa0822730:CDS |
| CTCATGGTTTGGAACAATGG+TGG | 0.626885 | 5_3:+61129552 | Msa0822730:CDS |
| AGTGGGAAAGGAATTGGCAA+AGG | 0.630778 | 5_3:+61128632 | Msa0822730:CDS |
| GCAGAAATGTATGCATTGGA+GGG | 0.630869 | 5_3:+61128580 | Msa0822730:CDS |
| GAGTGCTAAAACAGCTCTGG+GGG | 0.631284 | 5_3:-61128415 | None:intergenic |
| GTTCCAAACCATGAGCTGCA+AGG | 0.631713 | 5_3:-61129544 | None:intergenic |
| CAAATTAAATCTCTATACAC+CGG | 0.632498 | 5_3:+61129629 | Msa0822730:CDS |
| AGAAACCTTTGTTACAACGA+TGG | 0.639970 | 5_3:+61127068 | Msa0822730:exon |
| ATATTGATTGATGAAAGAGA+TGG | 0.641336 | 5_3:+61128315 | Msa0822730:CDS |
| TCCATCAAGCGCGATAAACG+AGG | 0.644282 | 5_3:-61128858 | None:intergenic |
| AAGAGAGAACATCGCCAATG+TGG | 0.644761 | 5_3:+61128971 | Msa0822730:CDS |
| GGAACACCTCAAGTTAACAA+TGG | 0.646064 | 5_3:+61130636 | Msa0822730:three_prime_UTR |
| TGATGTGGACGAGACTTATG+TGG | 0.646267 | 5_3:+61128800 | Msa0822730:CDS |
| CTCATAGCAAGTGAAACAGA+AGG | 0.653693 | 5_3:-61128690 | None:intergenic |
| TCCCTGAGGCCTGACAGTGA+AGG | 0.656091 | 5_3:-61130313 | None:intergenic |
| CTAAAGGAGGAACAACAACA+TGG | 0.656560 | 5_3:-61127095 | None:intergenic |
| TTCTTGTTAACATAAAGATG+AGG | 0.656648 | 5_3:-61128909 | None:intergenic |
| TTCTTGCCAACATACAGATG+AGG | 0.662002 | 5_3:-61129887 | None:intergenic |
| CAAACCCTTCAAACCAACAC+CGG | 0.663576 | 5_3:-61129810 | None:intergenic |
| ATAGCAAGTGAAACAGAAGG+TGG | 0.668464 | 5_3:-61128687 | None:intergenic |
| CTGTATGCTGACAAGAGTGG+TGG | 0.669477 | 5_3:+61130559 | Msa0822730:CDS |
| TATTCGTCTAAATAGAAGTG+AGG | 0.671454 | 5_3:+61130804 | Msa0822730:three_prime_UTR |
| AAATCTCAAATCATCAACGA+CGG | 0.700893 | 5_3:+61129308 | Msa0822730:CDS |
| TGAGTGCTAAAACAGCTCTG+GGG | 0.702289 | 5_3:-61128416 | None:intergenic |
| CCTAGGAACCAATTGGACCA+CGG | 0.706088 | 5_3:-61130347 | None:intergenic |
| TTCTTCAAGCCAGATAACTG+AGG | 0.718042 | 5_3:-61129836 | None:intergenic |
| CGGCATAACCGGTATCCCTG+AGG | 0.720056 | 5_3:-61130327 | None:intergenic |
| TCCTTCAAGCTAGATAACTG+GGG | 0.720408 | 5_3:-61129368 | None:intergenic |
| ATGGTTGACAAAGAGAACAA+GGG | 0.722106 | 5_3:+61130595 | Msa0822730:CDS |
| AGAGTTGTGATCATGTTACG+AGG | 0.726905 | 5_3:-61127138 | None:intergenic |
| TATCTGTATGCTGACAAGAG+TGG | 0.771941 | 5_3:+61130556 | Msa0822730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAGTTATTTTTTTTTTTTT+TGG | + | chr5_3:61127920-61127939 | Msa0822730:intron | 10.0% |
| !! | TGTAATAATGTTTCTTTATT+TGG | - | chr5_3:61127036-61127055 | None:intergenic | 15.0% |
| !! | ATAAAGAAACATTATTACAT+AGG | + | chr5_3:61127037-61127056 | Msa0822730:five_prime_UTR | 15.0% |
| !! | TATTAATCTATGAAATGAAA+TGG | - | chr5_3:61127202-61127221 | None:intergenic | 15.0% |
| !! | AACATTATTACATAGGAAAT+TGG | + | chr5_3:61127044-61127063 | Msa0822730:five_prime_UTR | 20.0% |
| !!! | ATTTCTTGTTGATGTTTTTT+AGG | + | chr5_3:61127324-61127343 | Msa0822730:intron | 20.0% |
| !!! | TTCATTTCTCAAATTTTTAC+TGG | + | chr5_3:61127763-61127782 | Msa0822730:intron | 20.0% |
| !! | TATAATGTCAGTTATATTCA+TGG | + | chr5_3:61127949-61127968 | Msa0822730:intron | 20.0% |
| !!! | ATTCATGGTTTTTTATTGTA+TGG | + | chr5_3:61127964-61127983 | Msa0822730:intron | 20.0% |
| !!! | TTTGAAACAAAACAATTATC+AGG | - | chr5_3:61128147-61128166 | None:intergenic | 20.0% |
| !!! | ATAATTGTTTTGTTTCAAAC+AGG | + | chr5_3:61128148-61128167 | Msa0822730:intron | 20.0% |
| !! | TTTATGTTAACAAGAATGAT+TGG | + | chr5_3:61128916-61128935 | Msa0822730:CDS | 20.0% |
| !!! | GACAAAAAGAAGAATTTTTA+TGG | + | chr5_3:61130185-61130204 | Msa0822730:CDS | 20.0% |
| !!! | AAGAAGAATTTTTATGGAAA+TGG | + | chr5_3:61130191-61130210 | Msa0822730:CDS | 20.0% |
| ! | GATGATTTACTTTCAACTAA+AGG | - | chr5_3:61127114-61127133 | None:intergenic | 25.0% |
| ! | AGTTGAAAACTTTACCAAAT+TGG | + | chr5_3:61127382-61127401 | Msa0822730:intron | 25.0% |
| !!! | TAACAGACTTTTTCCATTTA+CGG | - | chr5_3:61127459-61127478 | None:intergenic | 25.0% |
| !!! | TATTTTTTCATCAGCAATTG+TGG | - | chr5_3:61127530-61127549 | None:intergenic | 25.0% |
| ! | AGTCCTTAGAATCTTTATAA+GGG | - | chr5_3:61127645-61127664 | None:intergenic | 25.0% |
| ! | AAGTCCTTAGAATCTTTATA+AGG | - | chr5_3:61127646-61127665 | None:intergenic | 25.0% |
| !!! | ATGCTTTTAATCTAAAGTGT+CGG | - | chr5_3:61127713-61127732 | None:intergenic | 25.0% |
| ! | TCATCAATCAATATTTGTGT+GGG | - | chr5_3:61128309-61128328 | None:intergenic | 25.0% |
| ! | TTCATCAATCAATATTTGTG+TGG | - | chr5_3:61128310-61128329 | None:intergenic | 25.0% |
| !! | ATATTGATTGATGAAAGAGA+TGG | + | chr5_3:61128315-61128334 | Msa0822730:CDS | 25.0% |
| !! | TATTGATTGATGAAAGAGAT+GGG | + | chr5_3:61128316-61128335 | Msa0822730:CDS | 25.0% |
| ! | TTCAAACCATTTAAACCAAT+TGG | + | chr5_3:61128390-61128409 | Msa0822730:CDS | 25.0% |
| ! | TTGTTTAGGAAGAGAAAAAT+GGG | + | chr5_3:61128884-61128903 | Msa0822730:CDS | 25.0% |
| ! | TTCTTGTTAACATAAAGATG+AGG | - | chr5_3:61128912-61128931 | None:intergenic | 25.0% |
| ! | CAAATTAAATCTCTATACAC+CGG | + | chr5_3:61129629-61129648 | Msa0822730:CDS | 25.0% |
| ! | GAAGTAAAAAAAGGATCAAA+TGG | + | chr5_3:61129662-61129681 | Msa0822730:CDS | 25.0% |
| ! | CAGAAAAGGAAGAATTTATA+TGG | + | chr5_3:61129714-61129733 | Msa0822730:CDS | 25.0% |
| !! | TTAAATCCATTGTTAACTTG+AGG | - | chr5_3:61130645-61130664 | None:intergenic | 25.0% |
| ! | CATTGTTAAGATTGAAAACT+TGG | - | chr5_3:61130687-61130706 | None:intergenic | 25.0% |
| !! | GTTTAAGTTCTTAAAACTCT+AGG | + | chr5_3:61130739-61130758 | Msa0822730:three_prime_UTR | 25.0% |
| ! | TTGATACTTCTTAAAGCTAT+TGG | - | chr5_3:61130775-61130794 | None:intergenic | 25.0% |
| GATTTACTTTCAACTAAAGG+AGG | - | chr5_3:61127111-61127130 | None:intergenic | 30.0% | |
| ACATGATCACAACTCTTAAT+TGG | + | chr5_3:61127145-61127164 | Msa0822730:CDS | 30.0% | |
| !!! | GTTGATGTTTTTTAGGATGT+TGG | + | chr5_3:61127331-61127350 | Msa0822730:intron | 30.0% |
| !!! | GTCTTGTTTTAGAACATTGT+TGG | + | chr5_3:61127488-61127507 | Msa0822730:intron | 30.0% |
| AACCCCTTATAAAGATTCTA+AGG | + | chr5_3:61127639-61127658 | Msa0822730:intron | 30.0% | |
| GTCCTTAGAATCTTTATAAG+GGG | - | chr5_3:61127644-61127663 | None:intergenic | 30.0% | |
| GTGATTGAATGTAATCAGAT+TGG | - | chr5_3:61127742-61127761 | None:intergenic | 30.0% | |
| ! | TCTCAAATTTTTACTGGTGA+CGG | + | chr5_3:61127769-61127788 | Msa0822730:intron | 30.0% |
| GAGCTTCTTGATTAAAAACT+AGG | - | chr5_3:61127807-61127826 | None:intergenic | 30.0% | |
| !!! | TTGTTTTGTTTCAAACAGGA+AGG | + | chr5_3:61128152-61128171 | Msa0822730:intron | 30.0% |
| TGTACTTTCTTGAACTTGAT+AGG | + | chr5_3:61128220-61128239 | Msa0822730:CDS | 30.0% | |
| !! | TTTTCGGTGCAATATTTGAA+TGG | + | chr5_3:61128343-61128362 | Msa0822730:CDS | 30.0% |
| ! | TTTCGGTGCAATATTTGAAT+GGG | + | chr5_3:61128344-61128363 | Msa0822730:CDS | 30.0% |
| ! | TGTGAGATTTAAAGTAGCTA+TGG | + | chr5_3:61128524-61128543 | Msa0822730:CDS | 30.0% |
| AAATCAGTGTATGATACGTA+TGG | + | chr5_3:61128555-61128574 | Msa0822730:CDS | 30.0% | |
| !!! | CCTTTTTTCCAATATTTCCA+AGG | - | chr5_3:61128716-61128735 | None:intergenic | 30.0% |
| CCTTGGAAATATTGGAAAAA+AGG | + | chr5_3:61128713-61128732 | Msa0822730:CDS | 30.0% | |
| GAAAAAAGGCTGAATATGTT+TGG | + | chr5_3:61128727-61128746 | Msa0822730:CDS | 30.0% | |
| CTTGTTTAGGAAGAGAAAAA+TGG | + | chr5_3:61128883-61128902 | Msa0822730:CDS | 30.0% | |
| ! | TACTTTTATATCCATACCGA+TGG | + | chr5_3:61128945-61128964 | Msa0822730:CDS | 30.0% |
| CTTTGTGATAACATACAACT+TGG | - | chr5_3:61129030-61129049 | None:intergenic | 30.0% | |
| CAACTTAAATCTTTGAACAC+TGG | + | chr5_3:61129155-61129174 | Msa0822730:CDS | 30.0% | |
| GTGGCTAATGAAACATAATA+TGG | - | chr5_3:61129212-61129231 | None:intergenic | 30.0% | |
| TCTAATATTTATGTGACGAG+TGG | - | chr5_3:61129231-61129250 | None:intergenic | 30.0% | |
| GAGAAGTGACATATTATGTT+TGG | + | chr5_3:61129249-61129268 | Msa0822730:CDS | 30.0% | |
| GATTTACCACTTATATGATG+AGG | - | chr5_3:61129293-61129312 | None:intergenic | 30.0% | |
| AAATCTCAAATCATCAACGA+CGG | + | chr5_3:61129308-61129327 | Msa0822730:CDS | 30.0% | |
| ACTTCAGGTATAAGTTTGAT+GGG | + | chr5_3:61129338-61129357 | Msa0822730:CDS | 30.0% | |
| ! | AAATTTGTTTACTGTCTCCA+GGG | + | chr5_3:61129508-61129527 | Msa0822730:CDS | 30.0% |
| !! | TGCTGAAGTTCTAAATCATT+TGG | - | chr5_3:61129578-61129597 | None:intergenic | 30.0% |
| ! | TTCTTATGAGTTTTCCATCA+CGG | - | chr5_3:61129607-61129626 | None:intergenic | 30.0% |
| AATGATGGTTACAATACTTC+CGG | + | chr5_3:61129791-61129810 | Msa0822730:CDS | 30.0% | |
| !! | ATGAGTTTGCTATCATGAAT+AGG | - | chr5_3:61130067-61130086 | None:intergenic | 30.0% |
| TTTATACACCAATACACCTT+GGG | + | chr5_3:61130105-61130124 | Msa0822730:CDS | 30.0% | |
| CAAATGGGAAGTGAAATAAA+AGG | - | chr5_3:61130151-61130170 | None:intergenic | 30.0% | |
| TATTCGTCTAAATAGAAGTG+AGG | + | chr5_3:61130804-61130823 | Msa0822730:three_prime_UTR | 30.0% | |
| TAAATAGAAGTGAGGTGAAA+TGG | + | chr5_3:61130812-61130831 | Msa0822730:three_prime_UTR | 30.0% | |
| AGAAACCTTTGTTACAACGA+TGG | + | chr5_3:61127068-61127087 | Msa0822730:exon | 35.0% | |
| TGATCACAACTCTTAATTGG+AGG | + | chr5_3:61127148-61127167 | Msa0822730:CDS | 35.0% | |
| GATCACAACTCTTAATTGGA+GGG | + | chr5_3:61127149-61127168 | Msa0822730:CDS | 35.0% | |
| !!! | TTTTTAGGATGTTGGCAACA+TGG | + | chr5_3:61127339-61127358 | Msa0822730:intron | 35.0% |
| !!! | TTTTAGGATGTTGGCAACAT+GGG | + | chr5_3:61127340-61127359 | Msa0822730:intron | 35.0% |
| AAGTAACCAACAACCGTAAA+TGG | + | chr5_3:61127443-61127462 | Msa0822730:intron | 35.0% | |
| ! | CTTTTTCCATTTACGGTTGT+TGG | - | chr5_3:61127452-61127471 | None:intergenic | 35.0% |
| AACTCATTCTGTAGTTGACT+TGG | + | chr5_3:61127843-61127862 | Msa0822730:intron | 35.0% | |
| ! | GAAAGAGATGGGTCAATTTT+CGG | + | chr5_3:61128327-61128346 | Msa0822730:CDS | 35.0% |
| GTGCAATATTTGAATGGGAT+CGG | + | chr5_3:61128349-61128368 | Msa0822730:CDS | 35.0% | |
| CAAAATCTCTTCGCATTGTA+GGG | - | chr5_3:61128461-61128480 | None:intergenic | 35.0% | |
| TCAAAATCTCTTCGCATTGT+AGG | - | chr5_3:61128462-61128481 | None:intergenic | 35.0% | |
| GGCAAAGGAAATGATTAATG+TGG | + | chr5_3:61128647-61128666 | Msa0822730:CDS | 35.0% | |
| !! | TGCTCACAAATTTGCTATTG+CGG | - | chr5_3:61129133-61129152 | None:intergenic | 35.0% |
| !! | TAGAAAAGTACTACCTGAGA+AGG | - | chr5_3:61129185-61129204 | None:intergenic | 35.0% |
| GACTTCAGGTATAAGTTTGA+TGG | + | chr5_3:61129337-61129356 | Msa0822730:CDS | 35.0% | |
| ATCCTTCAAGCTAGATAACT+GGG | - | chr5_3:61129372-61129391 | None:intergenic | 35.0% | |
| TATCCTTCAAGCTAGATAAC+TGG | - | chr5_3:61129373-61129392 | None:intergenic | 35.0% | |
| ! | TTATCTAGCTTGAAGGATAC+CGG | + | chr5_3:61129374-61129393 | Msa0822730:CDS | 35.0% |
| TTCTCATTAGCATACAGAAG+AGG | - | chr5_3:61129422-61129441 | None:intergenic | 35.0% | |
| CTGTATGCTAATGAGAATGT+TGG | + | chr5_3:61129425-61129444 | Msa0822730:CDS | 35.0% | |
| GATGGTTAGAAAGGAGAATA+TGG | + | chr5_3:61129460-61129479 | Msa0822730:CDS | 35.0% | |
| GAGAATATGGATCATGAAGA+CGG | + | chr5_3:61129473-61129492 | Msa0822730:CDS | 35.0% | |
| ! | CAAATTTGTTTACTGTCTCC+AGG | + | chr5_3:61129507-61129526 | Msa0822730:CDS | 35.0% |
| ! | GTGATGGAAAACTCATAAGA+AGG | + | chr5_3:61129606-61129625 | Msa0822730:CDS | 35.0% |
| TCACCTTGGGAAGTAAAAAA+AGG | + | chr5_3:61129653-61129672 | Msa0822730:CDS | 35.0% | |
| !!! | GATCCTTTTTTTACTTCCCA+AGG | - | chr5_3:61129659-61129678 | None:intergenic | 35.0% |
| GCTTGAAGAATGTAGCTTAT+CGG | + | chr5_3:61129849-61129868 | Msa0822730:CDS | 35.0% | |
| CTTGAAGAATGTAGCTTATC+GGG | + | chr5_3:61129850-61129869 | Msa0822730:CDS | 35.0% | |
| ! | GCAGTAATTTTCTCATTTGC+AGG | - | chr5_3:61129953-61129972 | None:intergenic | 35.0% |
| AAGAAATCTCTGCTGTTCTT+TGG | - | chr5_3:61129993-61130012 | None:intergenic | 35.0% | |
| ATGATAGCAAACTCATAAGC+AGG | + | chr5_3:61130071-61130090 | Msa0822730:CDS | 35.0% | |
| CTTTATACACCAATACACCT+TGG | + | chr5_3:61130104-61130123 | Msa0822730:CDS | 35.0% | |
| ! | AATCTTTTTGTTACGTCCCA+AGG | - | chr5_3:61130124-61130143 | None:intergenic | 35.0% |
| CTGATACTATCGAGACAAAT+GGG | - | chr5_3:61130166-61130185 | None:intergenic | 35.0% | |
| TCTGATACTATCGAGACAAA+TGG | - | chr5_3:61130167-61130186 | None:intergenic | 35.0% | |
| ! | TCTTTCAAGTAGTGAAACTC+AGG | + | chr5_3:61130234-61130253 | Msa0822730:CDS | 35.0% |
| GATAAATACCTAAGTTGCCT+AGG | - | chr5_3:61130367-61130386 | None:intergenic | 35.0% | |
| CTTGTTCTTCAGTATTTCCA+AGG | - | chr5_3:61130411-61130430 | None:intergenic | 35.0% | |
| !! | ATAATGAAGGTATCCAACTC+TGG | - | chr5_3:61130492-61130511 | None:intergenic | 35.0% |
| AGTTGGATACCTTCATTATC+TGG | + | chr5_3:61130493-61130512 | Msa0822730:CDS | 35.0% | |
| ATGGTTGACAAAGAGAACAA+GGG | + | chr5_3:61130595-61130614 | Msa0822730:CDS | 35.0% | |
| TGTTCCCTATGTTATTGCAA+AGG | - | chr5_3:61130622-61130641 | None:intergenic | 35.0% | |
| ! | ACTTGGCATTTTGCAAACTA+TGG | - | chr5_3:61130670-61130689 | None:intergenic | 35.0% |
| GTTTGCCATCGTTGTAACAA+AGG | - | chr5_3:61127076-61127095 | None:intergenic | 40.0% | |
| CTAAAGGAGGAACAACAACA+TGG | - | chr5_3:61127098-61127117 | None:intergenic | 40.0% | |
| AGAGTTGTGATCATGTTACG+AGG | - | chr5_3:61127141-61127160 | None:intergenic | 40.0% | |
| CATGCAATTGCAACTAGTGT+TGG | - | chr5_3:61127298-61127317 | None:intergenic | 40.0% | |
| AGCAAGCAAGCAAACCAATT+TGG | - | chr5_3:61127399-61127418 | None:intergenic | 40.0% | |
| AGTCTCTGATTGACAGCATA+AGG | - | chr5_3:61127888-61127907 | None:intergenic | 40.0% | |
| ! | AGCCATTGCAAGTCTTATAC+AGG | + | chr5_3:61128194-61128213 | Msa0822730:CDS | 40.0% |
| TGCCTGTATAAGACTTGCAA+TGG | - | chr5_3:61128199-61128218 | None:intergenic | 40.0% | |
| CTTTCTTGAACTTGATAGGC+AGG | + | chr5_3:61128224-61128243 | Msa0822730:CDS | 40.0% | |
| TTGAAGGGAATCCAAAAAGC+TGG | - | chr5_3:61128279-61128298 | None:intergenic | 40.0% | |
| TGTGTGGGCTTATACTTGAA+GGG | - | chr5_3:61128294-61128313 | None:intergenic | 40.0% | |
| TTGTGTGGGCTTATACTTGA+AGG | - | chr5_3:61128295-61128314 | None:intergenic | 40.0% | |
| !! | ACGATTTCCGTTTTGTTGCT+TGG | + | chr5_3:61128484-61128503 | Msa0822730:CDS | 40.0% |
| !! | CGATTTCCGTTTTGTTGCTT+GGG | + | chr5_3:61128485-61128504 | Msa0822730:CDS | 40.0% |
| AGCATTCCCAAGCAACAAAA+CGG | - | chr5_3:61128494-61128513 | None:intergenic | 40.0% | |
| GGAAGCAGAAATGTATGCAT+TGG | + | chr5_3:61128576-61128595 | Msa0822730:CDS | 40.0% | |
| AGCAGAAATGTATGCATTGG+AGG | + | chr5_3:61128579-61128598 | Msa0822730:CDS | 40.0% | |
| GCAGAAATGTATGCATTGGA+GGG | + | chr5_3:61128580-61128599 | Msa0822730:CDS | 40.0% | |
| !! | CATTCTTTAGGTGCTGGATT+TGG | + | chr5_3:61128603-61128622 | Msa0822730:CDS | 40.0% |
| ! | ATTTGGTCTTCAAGTGGGAA+AGG | + | chr5_3:61128620-61128639 | Msa0822730:CDS | 40.0% |
| TCTTCAAGTGGGAAAGGAAT+TGG | + | chr5_3:61128626-61128645 | Msa0822730:CDS | 40.0% | |
| ATAGCAAGTGAAACAGAAGG+TGG | - | chr5_3:61128690-61128709 | None:intergenic | 40.0% | |
| CTCATAGCAAGTGAAACAGA+AGG | - | chr5_3:61128693-61128712 | None:intergenic | 40.0% | |
| GCTATGAGCCTTGGAAATAT+TGG | + | chr5_3:61128705-61128724 | Msa0822730:CDS | 40.0% | |
| ACTTGAGGTTCACTACTTGA+AGG | - | chr5_3:61128774-61128793 | None:intergenic | 40.0% | |
| GATGTTCTCTCTTGTTCCAT+CGG | - | chr5_3:61128964-61128983 | None:intergenic | 40.0% | |
| AGGATCCATATTCTCCACAT+TGG | - | chr5_3:61128988-61129007 | None:intergenic | 40.0% | |
| GCTTCATTGTGCTCATTAGA+AGG | - | chr5_3:61129008-61129027 | None:intergenic | 40.0% | |
| CATGAGCTTCGAGAAATTTC+TGG | - | chr5_3:61129058-61129077 | None:intergenic | 40.0% | |
| CAGAAATTTCTCGAAGCTCA+TGG | + | chr5_3:61129056-61129075 | Msa0822730:CDS | 40.0% | |
| TGTGTGCCTCATCATATAAG+TGG | + | chr5_3:61129284-61129303 | Msa0822730:CDS | 40.0% | |
| ! | CAGGTATAAGTTTGATGGGT+TGG | + | chr5_3:61129342-61129361 | Msa0822730:CDS | 40.0% |
| TCCTTCAAGCTAGATAACTG+GGG | - | chr5_3:61129371-61129390 | None:intergenic | 40.0% | |
| ! | CTTGAAGGATACCGGTTATT+GGG | + | chr5_3:61129382-61129401 | Msa0822730:CDS | 40.0% |
| TGTCGTGAAGATGGTTAGAA+AGG | + | chr5_3:61129451-61129470 | Msa0822730:CDS | 40.0% | |
| ! | TTTTACTTCCCAAGGTGAAC+CGG | - | chr5_3:61129651-61129670 | None:intergenic | 40.0% |
| ! | TTCCTTTTCTGCAAGACACA+TGG | - | chr5_3:61129705-61129724 | None:intergenic | 40.0% |
| TTCCTTCAAGCAGTGAATCT+CGG | + | chr5_3:61129762-61129781 | Msa0822730:CDS | 40.0% | |
| GGTTTGATACCTCAGTTATC+TGG | + | chr5_3:61129827-61129846 | Msa0822730:CDS | 40.0% | |
| TTCTTCAAGCCAGATAACTG+AGG | - | chr5_3:61129839-61129858 | None:intergenic | 40.0% | |
| TTCTTGCCAACATACAGATG+AGG | - | chr5_3:61129890-61129909 | None:intergenic | 40.0% | |
| CTGTATGTTGGCAAGAATTG+TGG | + | chr5_3:61129893-61129912 | Msa0822730:CDS | 40.0% | |
| CAGAGATTTCTTTCTGCTCA+CGG | + | chr5_3:61130001-61130020 | Msa0822730:CDS | 40.0% | |
| AAACTCATAAGCAGGCGAAT+TGG | + | chr5_3:61130079-61130098 | Msa0822730:CDS | 40.0% | |
| AAGTGTACCATTGAAGAGCT+GGG | + | chr5_3:61130288-61130307 | Msa0822730:CDS | 40.0% | |
| TAAGTTGCCTAGGAACCAAT+TGG | - | chr5_3:61130357-61130376 | None:intergenic | 40.0% | |
| ! | AATTGGTTCCTAGGCAACTT+AGG | + | chr5_3:61130356-61130375 | Msa0822730:CDS | 40.0% |
| ACAAGACTTCATTCCAGAGT+TGG | + | chr5_3:61130476-61130495 | Msa0822730:CDS | 40.0% | |
| ! | ACCTTCATTATCTGGCTTGA+AGG | + | chr5_3:61130501-61130520 | Msa0822730:CDS | 40.0% |
| TCCTTCAAGCCAGATAATGA+AGG | - | chr5_3:61130505-61130524 | None:intergenic | 40.0% | |
| CTCTTGTCAGCATACAGATA+TGG | - | chr5_3:61130556-61130575 | None:intergenic | 40.0% | |
| TATCTGTATGCTGACAAGAG+TGG | + | chr5_3:61130556-61130575 | Msa0822730:CDS | 40.0% | |
| GATGGTTGACAAAGAGAACA+AGG | + | chr5_3:61130594-61130613 | Msa0822730:CDS | 40.0% | |
| AGGGTCCTTTGCAATAACAT+AGG | + | chr5_3:61130614-61130633 | Msa0822730:exon | 40.0% | |
| GGGTCCTTTGCAATAACATA+GGG | + | chr5_3:61130615-61130634 | Msa0822730:exon | 40.0% | |
| GGAACACCTCAAGTTAACAA+TGG | + | chr5_3:61130636-61130655 | Msa0822730:three_prime_UTR | 40.0% | |
| !! | GGGACTTCATTGATTCTAGC+TGG | + | chr5_3:61127169-61127188 | Msa0822730:CDS | 45.0% |
| GCTCTTTGTTCGTGTCAACA+CGG | - | chr5_3:61128008-61128027 | None:intergenic | 45.0% | |
| !! | ACTCTCTAGCTCCAGCTTTT+TGG | + | chr5_3:61128265-61128284 | Msa0822730:CDS | 45.0% |
| ! | GGGGCACCAATTGGTTTAAA+TGG | - | chr5_3:61128399-61128418 | None:intergenic | 45.0% |
| TGAGTGCTAAAACAGCTCTG+GGG | - | chr5_3:61128419-61128438 | None:intergenic | 45.0% | |
| CTGAGTGCTAAAACAGCTCT+GGG | - | chr5_3:61128420-61128439 | None:intergenic | 45.0% | |
| TCTGAGTGCTAAAACAGCTC+TGG | - | chr5_3:61128421-61128440 | None:intergenic | 45.0% | |
| !!! | AGAGCTGTTTTAGCACTCAG+AGG | + | chr5_3:61128420-61128439 | Msa0822730:CDS | 45.0% |
| ! | TGTTGCTTGGGAATGCTTGA+AGG | + | chr5_3:61128497-61128516 | Msa0822730:CDS | 45.0% |
| !! | TGCATTGGAGGGCATTCTTT+AGG | + | chr5_3:61128591-61128610 | Msa0822730:CDS | 45.0% |
| ! | TGCTGGATTTGGTCTTCAAG+TGG | + | chr5_3:61128614-61128633 | Msa0822730:CDS | 45.0% |
| ! | GCTGGATTTGGTCTTCAAGT+GGG | + | chr5_3:61128615-61128634 | Msa0822730:CDS | 45.0% |
| AGTGGGAAAGGAATTGGCAA+AGG | + | chr5_3:61128632-61128651 | Msa0822730:CDS | 45.0% | |
| !! | GTTTCACTTGCTATGAGCCT+TGG | + | chr5_3:61128696-61128715 | Msa0822730:CDS | 45.0% |
| !! | ACCTCAAGTCAGCATTGATG+TGG | + | chr5_3:61128785-61128804 | Msa0822730:CDS | 45.0% |
| !! | TCCACATCAATGCTGACTTG+AGG | - | chr5_3:61128789-61128808 | None:intergenic | 45.0% |
| TGATGTGGACGAGACTTATG+TGG | + | chr5_3:61128800-61128819 | Msa0822730:CDS | 45.0% | |
| ! | CGCTTGATGGATGCTTGTTT+AGG | + | chr5_3:61128870-61128889 | Msa0822730:CDS | 45.0% |
| TCTCTCTTGTTCCATCGGTA+TGG | - | chr5_3:61128959-61128978 | None:intergenic | 45.0% | |
| AAGAGAGAACATCGCCAATG+TGG | + | chr5_3:61128971-61128990 | Msa0822730:CDS | 45.0% | |
| CATCGCCAATGTGGAGAATA+TGG | + | chr5_3:61128980-61128999 | Msa0822730:CDS | 45.0% | |
| AAGCTCATGGCTTGAAGCAA+TGG | + | chr5_3:61129069-61129088 | Msa0822730:CDS | 45.0% | |
| AAGCAATGGTGGTCAAGTGA+CGG | + | chr5_3:61129083-61129102 | Msa0822730:CDS | 45.0% | |
| AACGACGGACAAATGACTTC+AGG | + | chr5_3:61129323-61129342 | Msa0822730:CDS | 45.0% | |
| ! | ACCCCAGTTATCTAGCTTGA+AGG | + | chr5_3:61129367-61129386 | Msa0822730:CDS | 45.0% |
| ! | GCTTGAAGGATACCGGTTAT+TGG | + | chr5_3:61129381-61129400 | Msa0822730:CDS | 45.0% |
| CCATTTCCACACCCAATAAC+CGG | - | chr5_3:61129396-61129415 | None:intergenic | 45.0% | |
| CGGTTATTGGGTGTGGAAAT+GGG | + | chr5_3:61129394-61129413 | Msa0822730:CDS | 45.0% | |
| AAGGAAGTTCAGTTGTTCCC+TGG | - | chr5_3:61129528-61129547 | None:intergenic | 45.0% | |
| ! | CAGCTCATGGTTTGGAACAA+TGG | + | chr5_3:61129549-61129568 | Msa0822730:CDS | 45.0% |
| ! | CTCATGGTTTGGAACAATGG+TGG | + | chr5_3:61129552-61129571 | Msa0822730:CDS | 45.0% |
| CTTCAGCAAACTATCCGTGA+TGG | + | chr5_3:61129590-61129609 | Msa0822730:CDS | 45.0% | |
| !! | TCTATACACCGGTTCACCTT+GGG | + | chr5_3:61129640-61129659 | Msa0822730:CDS | 45.0% |
| TGCCATGTGTCTTGCAGAAA+AGG | + | chr5_3:61129700-61129719 | Msa0822730:CDS | 45.0% | |
| TTCACTGCTTGAAGGAAGCA+TGG | - | chr5_3:61129759-61129778 | None:intergenic | 45.0% | |
| TCCTTCAAGCAGTGAATCTC+GGG | + | chr5_3:61129763-61129782 | Msa0822730:CDS | 45.0% | |
| GGTTACAATACTTCCGGTGT+TGG | + | chr5_3:61129797-61129816 | Msa0822730:CDS | 45.0% | |
| !! | TACTTCCGGTGTTGGTTTGA+AGG | + | chr5_3:61129805-61129824 | Msa0822730:CDS | 45.0% |
| !! | ACTTCCGGTGTTGGTTTGAA+GGG | + | chr5_3:61129806-61129825 | Msa0822730:CDS | 45.0% |
| CAAACCCTTCAAACCAACAC+CGG | - | chr5_3:61129813-61129832 | None:intergenic | 45.0% | |
| TGGGTTCCTCATCTGTATGT+TGG | + | chr5_3:61129881-61129900 | Msa0822730:CDS | 45.0% | |
| CAAGAATTGTGGCACAGAAG+AGG | + | chr5_3:61129904-61129923 | Msa0822730:CDS | 45.0% | |
| TGCTGAAGTTCTGCATCACT+TGG | - | chr5_3:61130043-61130062 | None:intergenic | 45.0% | |
| TGTTACGTCCCAAGGTGTAT+TGG | - | chr5_3:61130116-61130135 | None:intergenic | 45.0% | |
| CAAGTGTACCATTGAAGAGC+TGG | + | chr5_3:61130287-61130306 | Msa0822730:CDS | 45.0% | |
| TTCAGTATTTCCAAGGCTCG+TGG | - | chr5_3:61130404-61130423 | None:intergenic | 45.0% | |
| !!! | GCTTGAAGGATGCTGCTTTT+GGG | + | chr5_3:61130515-61130534 | Msa0822730:CDS | 45.0% |
| !!! | CTTGAAGGATGCTGCTTTTG+GGG | + | chr5_3:61130516-61130535 | Msa0822730:CDS | 45.0% |
| !!! | TGCTTTTGGGGTGGGAAAAT+TGG | + | chr5_3:61130528-61130547 | Msa0822730:CDS | 45.0% |
| TGGTGGAAAAGACGACAAGA+TGG | + | chr5_3:61130576-61130595 | Msa0822730:CDS | 45.0% | |
| TCGTGTCAACACGGTACTCT+TGG | - | chr5_3:61127999-61128018 | None:intergenic | 50.0% | |
| !! | ATCTGATGCAAAAGCACCGC+TGG | + | chr5_3:61128084-61128103 | Msa0822730:intron | 50.0% |
| !! | TGCAAAAGCACCGCTGGTTT+CGG | + | chr5_3:61128090-61128109 | Msa0822730:intron | 50.0% |
| GTAAATGCCACCGAAACCAG+CGG | - | chr5_3:61128103-61128122 | None:intergenic | 50.0% | |
| ! | GAGTGCTAAAACAGCTCTGG+GGG | - | chr5_3:61128418-61128437 | None:intergenic | 50.0% |
| TCCATCAAGCGCGATAAACG+AGG | - | chr5_3:61128861-61128880 | None:intergenic | 50.0% | |
| CTCATGGCTTGAAGCAATGG+TGG | + | chr5_3:61129072-61129091 | Msa0822730:CDS | 50.0% | |
| GAACACTGGTACACCTTCTC+AGG | + | chr5_3:61129169-61129188 | Msa0822730:CDS | 50.0% | |
| ! | AGGATACCGGTTATTGGGTG+TGG | + | chr5_3:61129387-61129406 | Msa0822730:CDS | 50.0% |
| CCGGTTATTGGGTGTGGAAA+TGG | + | chr5_3:61129393-61129412 | Msa0822730:CDS | 50.0% | |
| CTGAACTTCCTTGCAGCTCA+TGG | + | chr5_3:61129536-61129555 | Msa0822730:CDS | 50.0% | |
| CTTCCTTGCAGCTCATGGTT+TGG | + | chr5_3:61129541-61129560 | Msa0822730:CDS | 50.0% | |
| GTTCCAAACCATGAGCTGCA+AGG | - | chr5_3:61129547-61129566 | None:intergenic | 50.0% | |
| !! | CTCTATACACCGGTTCACCT+TGG | + | chr5_3:61129639-61129658 | Msa0822730:CDS | 50.0% |
| ACCCGAGATTCACTGCTTGA+AGG | - | chr5_3:61129767-61129786 | None:intergenic | 50.0% | |
| GAATCTCGGGTGCTCAATGA+TGG | + | chr5_3:61129776-61129795 | Msa0822730:CDS | 50.0% | |
| TAGCTTATCGGGTGTGCGAA+TGG | + | chr5_3:61129861-61129880 | Msa0822730:CDS | 50.0% | |
| AGCTTATCGGGTGTGCGAAT+GGG | + | chr5_3:61129862-61129881 | Msa0822730:CDS | 50.0% | |
| GAATTGTGGCACAGAAGAGG+AGG | + | chr5_3:61129907-61129926 | Msa0822730:CDS | 50.0% | |
| CACAGAAGAGGAGGTTGACA+AGG | + | chr5_3:61129916-61129935 | Msa0822730:CDS | 50.0% | |
| GGAGGTTGACAAGGAGAATG+TGG | + | chr5_3:61129925-61129944 | Msa0822730:CDS | 50.0% | |
| CAATTGGACCACGGCATAAC+CGG | - | chr5_3:61130341-61130360 | None:intergenic | 50.0% | |
| CCTAGGAACCAATTGGACCA+CGG | - | chr5_3:61130350-61130369 | None:intergenic | 50.0% | |
| !!! | GGCTTGAAGGATGCTGCTTT+TGG | + | chr5_3:61130514-61130533 | Msa0822730:CDS | 50.0% |
| !!! | AAGGATGCTGCTTTTGGGGT+GGG | + | chr5_3:61130520-61130539 | Msa0822730:CDS | 50.0% |
| CTGTATGCTGACAAGAGTGG+TGG | + | chr5_3:61130559-61130578 | Msa0822730:CDS | 50.0% | |
| !! | AAAAGCACCGCTGGTTTCGG+TGG | + | chr5_3:61128093-61128112 | Msa0822730:intron | 55.0% |
| !! | GGAGGGCATTCTTTAGGTGC+TGG | + | chr5_3:61128597-61128616 | Msa0822730:CDS | 55.0% |
| GCCTCGTTTATCGCGCTTGA+TGG | + | chr5_3:61128857-61128876 | Msa0822730:CDS | 55.0% | |
| TGTTGGCGCTGTCGTGAAGA+TGG | + | chr5_3:61129442-61129461 | Msa0822730:CDS | 55.0% | |
| CTGCTCACGGCTTGCAACAA+TGG | + | chr5_3:61130014-61130033 | Msa0822730:CDS | 55.0% | |
| CTCACGGCTTGCAACAATGG+TGG | + | chr5_3:61130017-61130036 | Msa0822730:CDS | 55.0% | |
| !! | GAAGGCACCCAGCTCTTCAA+TGG | - | chr5_3:61130298-61130317 | None:intergenic | 55.0% |
| CGGTTATGCCGTGGTCCAAT+TGG | + | chr5_3:61130339-61130358 | Msa0822730:CDS | 55.0% | |
| ! | CCGTGGTCCAATTGGTTCCT+AGG | + | chr5_3:61130347-61130366 | Msa0822730:CDS | 55.0% |
| GTATTTCCAAGGCTCGTGGC+TGG | - | chr5_3:61130400-61130419 | None:intergenic | 55.0% | |
| !!! | GAAGGATGCTGCTTTTGGGG+TGG | + | chr5_3:61130519-61130538 | Msa0822730:CDS | 55.0% |
| !! | ACAGCTCTGGGGGCACCAAT+TGG | - | chr5_3:61128408-61128427 | None:intergenic | 60.0% |
| AGCTGGGTGCCTTCACTGTC+AGG | + | chr5_3:61130304-61130323 | Msa0822730:CDS | 60.0% | |
| TGCCTTCACTGTCAGGCCTC+AGG | + | chr5_3:61130311-61130330 | Msa0822730:CDS | 60.0% | |
| GCCTTCACTGTCAGGCCTCA+GGG | + | chr5_3:61130312-61130331 | Msa0822730:CDS | 60.0% | |
| TCCCTGAGGCCTGACAGTGA+AGG | - | chr5_3:61130316-61130335 | None:intergenic | 60.0% | |
| CTGTCAGGCCTCAGGGATAC+CGG | + | chr5_3:61130319-61130338 | Msa0822730:CDS | 60.0% | |
| CGGCATAACCGGTATCCCTG+AGG | - | chr5_3:61130330-61130349 | None:intergenic | 60.0% | |
| ! | CAGGGATACCGGTTATGCCG+TGG | + | chr5_3:61130330-61130349 | Msa0822730:CDS | 60.0% |
| GCTCGTGGCTGGAGCAACAA+AGG | - | chr5_3:61130389-61130408 | None:intergenic | 60.0% | |
| GTTGCTCCAGCCACGAGCCT+TGG | + | chr5_3:61130391-61130410 | Msa0822730:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 61127027 | 61130894 | 61127027 | ID=Msa0822730;Name=Msa0822730 |
| chr5_3 | mRNA | 61127027 | 61130894 | 61127027 | ID=Msa0822730-mRNA-1;Parent=Msa0822730;Name=Msa0822730-mRNA-1;_AED=0.21;_eAED=0.21;_QI=60|1|1|1|1|1|2|264|854 |
| chr5_3 | exon | 61127027 | 61127190 | 61127027 | ID=Msa0822730-mRNA-1:exon:18823;Parent=Msa0822730-mRNA-1 |
| chr5_3 | exon | 61128170 | 61130894 | 61128170 | ID=Msa0822730-mRNA-1:exon:18824;Parent=Msa0822730-mRNA-1 |
| chr5_3 | five_prime_UTR | 61127027 | 61127086 | 61127027 | ID=Msa0822730-mRNA-1:five_prime_utr;Parent=Msa0822730-mRNA-1 |
| chr5_3 | CDS | 61127087 | 61127190 | 61127087 | ID=Msa0822730-mRNA-1:cds;Parent=Msa0822730-mRNA-1 |
| chr5_3 | CDS | 61128170 | 61130630 | 61128170 | ID=Msa0822730-mRNA-1:cds;Parent=Msa0822730-mRNA-1 |
| chr5_3 | three_prime_UTR | 61130631 | 61130894 | 61130631 | ID=Msa0822730-mRNA-1:three_prime_utr;Parent=Msa0822730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
