Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414640 | sp|Q680C0|GDL62_ARATH | 26.190 | 336 | 214 | 9 | 73 | 388 | 24 | 345 | 1.73e-26 | 115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414640 | G7KD41 | 85.634 | 891 | 80 | 4 | 1 | 890 | 1 | 844 | 0.0 | 1545 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1414640 | 0.840098 | 1.066733e-57 | -8.615850e-47 |
| Msa0001940 | Msa1414640 | 0.820816 | 5.615626e-53 | -8.615850e-47 |
| Msa0002580 | Msa1414640 | 0.827179 | 1.804485e-54 | -8.615850e-47 |
| Msa0005890 | Msa1414640 | 0.816551 | 5.218162e-52 | -8.615850e-47 |
| Msa0017930 | Msa1414640 | 0.810944 | 8.958263e-51 | -8.615850e-47 |
| Msa0017950 | Msa1414640 | 0.824837 | 6.499597e-54 | -8.615850e-47 |
| Msa0027280 | Msa1414640 | 0.822847 | 1.902557e-53 | -8.615850e-47 |
| Msa0034810 | Msa1414640 | 0.817610 | 3.016542e-52 | -8.615850e-47 |
| Msa0081020 | Msa1414640 | 0.827669 | 1.377184e-54 | -8.615850e-47 |
| Msa0081390 | Msa1414640 | 0.830862 | 2.312793e-55 | -8.615850e-47 |
| Msa0081450 | Msa1414640 | 0.826212 | 3.070634e-54 | -8.615850e-47 |
| Msa0081780 | Msa1414640 | 0.810027 | 1.413694e-50 | -8.615850e-47 |
| Msa0090400 | Msa1414640 | 0.802987 | 4.321092e-49 | -8.615850e-47 |
| Msa0098040 | Msa1414640 | 0.803213 | 3.881458e-49 | -8.615850e-47 |
| Msa0101500 | Msa1414640 | -0.832240 | 1.058305e-55 | -8.615850e-47 |
| Msa1347310 | Msa1414640 | 0.839915 | 1.190793e-57 | -8.615850e-47 |
| Msa1356600 | Msa1414640 | -0.806242 | 9.048239e-50 | -8.615850e-47 |
| Msa1372040 | Msa1414640 | 0.832157 | 1.109460e-55 | -8.615850e-47 |
| Msa1372230 | Msa1414640 | 0.809012 | 2.335414e-50 | -8.615850e-47 |
| Msa1405460 | Msa1414640 | 0.820284 | 7.439097e-53 | -8.615850e-47 |
| Msa1414640 | Msa1450100 | 0.815125 | 1.084850e-51 | -8.615850e-47 |
| Msa0611210 | Msa1414640 | 0.830923 | 2.233861e-55 | -8.615850e-47 |
| Msa0651550 | Msa1414640 | 0.812398 | 4.325820e-51 | -8.615850e-47 |
| Msa0741220 | Msa1414640 | 0.858488 | 7.958573e-63 | -8.615850e-47 |
| Msa0741650 | Msa1414640 | 0.999681 | 0.000000e+00 | -8.615850e-47 |
| Msa0756490 | Msa1414640 | 0.814064 | 1.863136e-51 | -8.615850e-47 |
| Msa0792370 | Msa1414640 | 0.804707 | 1.898301e-49 | -8.615850e-47 |
| Msa0795870 | Msa1414640 | 0.825911 | 3.620964e-54 | -8.615850e-47 |
| Msa0822730 | Msa1414640 | 0.862039 | 6.717631e-64 | -8.615850e-47 |
| Msa0824450 | Msa1414640 | 0.811022 | 8.617743e-51 | -8.615850e-47 |
| Msa0829300 | Msa1414640 | 0.829915 | 3.939785e-55 | -8.615850e-47 |
| Msa0829330 | Msa1414640 | 0.822043 | 2.926097e-53 | -8.615850e-47 |
| Msa0833650 | Msa1414640 | 0.828641 | 8.032165e-55 | -8.615850e-47 |
| Msa0835490 | Msa1414640 | 0.849453 | 3.201871e-60 | -8.615850e-47 |
| Msa0132630 | Msa1414640 | -0.819685 | 1.019981e-52 | -8.615850e-47 |
| Msa0173690 | Msa1414640 | 0.819066 | 1.411826e-52 | -8.615850e-47 |
| Msa0175730 | Msa1414640 | 0.808948 | 2.409209e-50 | -8.615850e-47 |
| Msa0175750 | Msa1414640 | 0.829609 | 4.676857e-55 | -8.615850e-47 |
| Msa0178560 | Msa1414640 | 0.803613 | 3.206105e-49 | -8.615850e-47 |
| Msa0188610 | Msa1414640 | 0.816904 | 4.348117e-52 | -8.615850e-47 |
| Msa0191020 | Msa1414640 | 0.802010 | 6.870753e-49 | -8.615850e-47 |
| Msa0211030 | Msa1414640 | 0.822564 | 2.214575e-53 | -8.615850e-47 |
| Msa0225100 | Msa1414640 | 0.822511 | 2.277902e-53 | -8.615850e-47 |
| Msa0233320 | Msa1414640 | 0.805038 | 1.618607e-49 | -8.615850e-47 |
| Msa1243490 | Msa1414640 | 0.803371 | 3.599713e-49 | -8.615850e-47 |
| Msa1265650 | Msa1414640 | 0.831465 | 1.644114e-55 | -8.615850e-47 |
| Msa1303560 | Msa1414640 | 0.807077 | 6.028549e-50 | -8.615850e-47 |
| Msa1303650 | Msa1414640 | 0.806800 | 6.897425e-50 | -8.615850e-47 |
| Msa1325410 | Msa1414640 | -0.837990 | 3.750491e-57 | -8.615850e-47 |
| Msa1340200 | Msa1414640 | 0.807556 | 4.772150e-50 | -8.615850e-47 |
| Msa0405680 | Msa1414640 | 0.845991 | 2.874759e-59 | -8.615850e-47 |
| Msa0436910 | Msa1414640 | 0.822285 | 2.570682e-53 | -8.615850e-47 |
| Msa0476650 | Msa1414640 | 0.804258 | 2.354459e-49 | -8.615850e-47 |
| Msa1044680 | Msa1414640 | 0.819784 | 9.683228e-53 | -8.615850e-47 |
| Msa1071180 | Msa1414640 | -0.806512 | 7.933679e-50 | -8.615850e-47 |
| Msa1090140 | Msa1414640 | 0.803060 | 4.174412e-49 | -8.615850e-47 |
| Msa1103990 | Msa1414640 | 0.824046 | 9.978064e-54 | -8.615850e-47 |
| Msa1105640 | Msa1414640 | 0.811286 | 7.552233e-51 | -8.615850e-47 |
| Msa0244640 | Msa1414640 | 0.834240 | 3.360988e-56 | -8.615850e-47 |
| Msa0266180 | Msa1414640 | 0.817770 | 2.776107e-52 | -8.615850e-47 |
| Msa0270340 | Msa1414640 | 0.850395 | 1.745815e-60 | -8.615850e-47 |
| Msa0279690 | Msa1414640 | 0.800559 | 1.361399e-48 | -8.615850e-47 |
| Msa0283330 | Msa1414640 | 0.829995 | 3.767593e-55 | -8.615850e-47 |
| Msa0287740 | Msa1414640 | 0.826953 | 2.044542e-54 | -8.615850e-47 |
| Msa0290720 | Msa1414640 | 0.821105 | 4.817619e-53 | -8.615850e-47 |
| Msa0298470 | Msa1414640 | 0.817000 | 4.137196e-52 | -8.615850e-47 |
| Msa0307670 | Msa1414640 | 0.803782 | 2.958153e-49 | -8.615850e-47 |
| Msa0321620 | Msa1414640 | 0.823211 | 1.564669e-53 | -8.615850e-47 |
| Msa0337700 | Msa1414640 | 0.800568 | 1.356167e-48 | -8.615850e-47 |
| Msa0349210 | Msa1414640 | 0.825071 | 5.724814e-54 | -8.615850e-47 |
| Msa1132840 | Msa1414640 | 0.833828 | 4.260726e-56 | -8.615850e-47 |
| Msa1155170 | Msa1414640 | -0.820636 | 6.179015e-53 | -8.615850e-47 |
| Msa1205280 | Msa1414640 | 0.808804 | 2.587106e-50 | -8.615850e-47 |
| Msa1208950 | Msa1414640 | 0.803119 | 4.058760e-49 | -8.615850e-47 |
| Msa0519830 | Msa1414640 | 0.805234 | 1.472990e-49 | -8.615850e-47 |
| Msa0528570 | Msa1414640 | 0.801726 | 7.857497e-49 | -8.615850e-47 |
| Msa0529030 | Msa1414640 | 0.822564 | 2.214606e-53 | -8.615850e-47 |
| Msa0530780 | Msa1414640 | 0.829033 | 6.454434e-55 | -8.615850e-47 |
| Msa0557460 | Msa1414640 | 0.813200 | 2.887165e-51 | -8.615850e-47 |
| Msa0580370 | Msa1414640 | 0.831032 | 2.100640e-55 | -8.615850e-47 |
| Msa0581470 | Msa1414640 | 0.811128 | 8.173977e-51 | -8.615850e-47 |
| Msa0861850 | Msa1414640 | 0.802992 | 4.311226e-49 | -8.615850e-47 |
| Msa0869280 | Msa1414640 | 0.803463 | 3.444261e-49 | -8.615850e-47 |
| Msa0905240 | Msa1414640 | 0.803211 | 3.885428e-49 | -8.615850e-47 |
| Msa0928300 | Msa1414640 | 0.809311 | 2.014475e-50 | -8.615850e-47 |
| Msa0937230 | Msa1414640 | 0.800805 | 1.212820e-48 | -8.615850e-47 |
| Msa0960880 | Msa1414640 | -0.817317 | 3.511052e-52 | -8.615850e-47 |
| Msa0967870 | Msa1414640 | 0.827008 | 1.982780e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414640 | MtrunA17_Chr5g0443021 | 84.916 | 537 | 45 | 1 | 1 | 537 | 1 | 501 | 0.0 | 937 |
| Msa1414640 | MtrunA17_Chr5g0443021 | 39.333 | 300 | 157 | 8 | 415 | 692 | 205 | 501 | 8.50e-46 | 172 |
| Msa1414640 | MtrunA17_Chr5g0443021 | 39.516 | 248 | 121 | 11 | 579 | 803 | 211 | 452 | 1.77e-36 | 144 |
| Msa1414640 | MtrunA17_Chr5g0443031 | 89.320 | 309 | 31 | 2 | 583 | 890 | 1 | 308 | 0.0 | 555 |
| Msa1414640 | MtrunA17_Chr5g0443031 | 50.226 | 221 | 101 | 5 | 431 | 645 | 6 | 223 | 4.13e-56 | 196 |
| Msa1414640 | MtrunA17_Chr5g0443031 | 36.777 | 242 | 122 | 8 | 256 | 488 | 3 | 222 | 3.87e-34 | 133 |
| Msa1414640 | MtrunA17_Chr5g0443011 | 81.495 | 281 | 47 | 1 | 116 | 396 | 14 | 289 | 1.71e-166 | 486 |
| Msa1414640 | MtrunA17_Chr5g0443011 | 42.857 | 147 | 66 | 5 | 579 | 709 | 145 | 289 | 2.88e-24 | 103 |
| Msa1414640 | MtrunA17_Chr5g0443011 | 38.710 | 155 | 80 | 4 | 415 | 556 | 139 | 291 | 2.18e-18 | 86.7 |
| Msa1414640 | MtrunA17_Chr5g0442991 | 55.476 | 420 | 135 | 8 | 1 | 413 | 1 | 375 | 5.73e-142 | 426 |
| Msa1414640 | MtrunA17_Chr5g0442991 | 48.503 | 167 | 62 | 6 | 575 | 722 | 210 | 371 | 3.98e-32 | 129 |
| Msa1414640 | MtrunA17_Chr5g0442991 | 41.667 | 168 | 79 | 5 | 415 | 567 | 208 | 371 | 1.04e-25 | 110 |
| Msa1414640 | MtrunA17_Chr3g0096121 | 53.980 | 402 | 133 | 7 | 16 | 410 | 44 | 400 | 4.52e-127 | 389 |
| Msa1414640 | MtrunA17_Chr3g0096121 | 44.785 | 163 | 66 | 6 | 579 | 720 | 238 | 397 | 1.55e-25 | 110 |
| Msa1414640 | MtrunA17_Chr3g0096121 | 34.524 | 168 | 89 | 4 | 415 | 564 | 232 | 396 | 4.30e-17 | 84.7 |
| Msa1414640 | MtrunA17_Chr8g0388281 | 30.882 | 340 | 189 | 7 | 73 | 388 | 22 | 339 | 1.01e-37 | 144 |
| Msa1414640 | MtrunA17_Chr5g0410331 | 30.294 | 340 | 186 | 8 | 73 | 386 | 23 | 337 | 2.02e-32 | 129 |
| Msa1414640 | MtrunA17_Chr5g0396551 | 28.070 | 342 | 196 | 9 | 73 | 388 | 22 | 339 | 1.55e-30 | 123 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414640 | AT5G50890.1 | 49.242 | 396 | 154 | 8 | 16 | 404 | 49 | 404 | 7.71e-117 | 362 |
| Msa1414640 | AT5G50890.1 | 37.059 | 170 | 80 | 9 | 575 | 719 | 239 | 406 | 7.87e-15 | 78.2 |
| Msa1414640 | AT5G50890.1 | 32.353 | 170 | 95 | 6 | 415 | 564 | 237 | 406 | 5.42e-13 | 72.4 |
| Msa1414640 | AT5G24230.1 | 28.358 | 335 | 192 | 6 | 75 | 379 | 38 | 354 | 2.50e-30 | 124 |
| Msa1414640 | AT5G24230.3 | 28.358 | 335 | 192 | 6 | 75 | 379 | 38 | 354 | 2.50e-30 | 124 |
| Msa1414640 | AT5G24230.2 | 28.358 | 335 | 192 | 6 | 75 | 379 | 38 | 354 | 2.50e-30 | 124 |
| Msa1414640 | AT2G05260.1 | 27.457 | 346 | 196 | 8 | 75 | 385 | 25 | 350 | 7.97e-29 | 119 |
| Msa1414640 | AT2G05260.2 | 37.079 | 178 | 98 | 3 | 75 | 248 | 25 | 192 | 1.73e-28 | 117 |
| Msa1414640 | AT5G24220.1 | 26.866 | 335 | 193 | 8 | 75 | 382 | 41 | 350 | 7.78e-28 | 117 |
| Msa1414640 | AT4G10955.2 | 26.190 | 336 | 214 | 9 | 73 | 388 | 24 | 345 | 1.76e-27 | 115 |
| Msa1414640 | AT4G10955.1 | 26.190 | 336 | 214 | 9 | 73 | 388 | 24 | 345 | 1.76e-27 | 115 |
| Msa1414640 | AT5G24180.1 | 26.901 | 342 | 191 | 12 | 75 | 385 | 39 | 352 | 6.88e-25 | 108 |
| Msa1414640 | AT5G24200.2 | 29.738 | 343 | 168 | 10 | 76 | 380 | 25 | 332 | 4.76e-23 | 102 |
| Msa1414640 | AT5G24200.3 | 29.738 | 343 | 168 | 10 | 76 | 380 | 25 | 332 | 4.76e-23 | 102 |
| Msa1414640 | AT5G24200.1 | 29.738 | 343 | 168 | 10 | 76 | 380 | 25 | 332 | 4.76e-23 | 102 |
| Msa1414640 | AT5G24210.2 | 28.274 | 336 | 183 | 11 | 76 | 380 | 30 | 338 | 8.13e-22 | 98.6 |
| Msa1414640 | AT5G24210.3 | 28.274 | 336 | 183 | 11 | 76 | 380 | 30 | 338 | 8.13e-22 | 98.6 |
| Msa1414640 | AT5G24210.1 | 28.274 | 336 | 183 | 11 | 76 | 380 | 30 | 338 | 8.13e-22 | 98.6 |
Find 204 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAATAATGTTTCTTTATT+TGG | 0.078578 | tig0024137:-59013 | None:intergenic |
| GGCTTGAAGGATGCTGCTTT+TGG | 0.189077 | tig0024137:+62491 | Msa1414640:CDS |
| CATGAGCTTCGAGAAATTTC+TGG | 0.197329 | tig0024137:-61032 | None:intergenic |
| AACATTATTACATAGGAAAT+TGG | 0.224883 | tig0024137:+59024 | Msa1414640:five_prime_UTR |
| GGAGCACCAATTGGTTTAAA+TGG | 0.231548 | tig0024137:-60373 | None:intergenic |
| AGTTGAAAACTTTACCAAAT+TGG | 0.233288 | tig0024137:+59362 | Msa1414640:CDS |
| ACATGATCACAACTCTTAAT+TGG | 0.236822 | tig0024137:+59125 | Msa1414640:CDS |
| TTGATACTTCTTAAAGCTAT+TGG | 0.245387 | tig0024137:-62749 | None:intergenic |
| AGTTGGATACCTTCATTATC+TGG | 0.269699 | tig0024137:+62470 | Msa1414640:CDS |
| GCTATGAGCCTTGGAAATAT+TGG | 0.270906 | tig0024137:+60682 | Msa1414640:CDS |
| CAGAAAAGGAAGAATTTATA+TGG | 0.274727 | tig0024137:+61691 | Msa1414640:CDS |
| AAGAAATCTCTGCTGTTCTT+TGG | 0.275359 | tig0024137:-61967 | None:intergenic |
| GCTTGAAGGATACCGGTTAT+TGG | 0.275423 | tig0024137:+61358 | Msa1414640:CDS |
| TGCATTGGAGGGCATTCTTT+AGG | 0.288580 | tig0024137:+60568 | Msa1414640:CDS |
| CCGGTTATTGGGTGTGGAAA+TGG | 0.295956 | tig0024137:+61370 | Msa1414640:CDS |
| GATGGTTAGAAAGGAGAATA+TGG | 0.298618 | tig0024137:+61437 | Msa1414640:CDS |
| CATTGTTAAGATTGAAAACT+TGG | 0.301924 | tig0024137:-62661 | None:intergenic |
| CATCGCCAATGTGGAGAATA+TGG | 0.306203 | tig0024137:+60957 | Msa1414640:CDS |
| GCCTCGTTTATCGCGCTTGA+TGG | 0.306679 | tig0024137:+60834 | Msa1414640:CDS |
| TGCCTTCACTGTCAGGCCTC+AGG | 0.308352 | tig0024137:+62288 | Msa1414640:CDS |
| GAGAAGTGACATATTATGTT+TGG | 0.311865 | tig0024137:+61226 | Msa1414640:CDS |
| CTTCCTTGCAGCTCATGGTT+TGG | 0.319831 | tig0024137:+61518 | Msa1414640:CDS |
| CATTCTTTAGGTGCTGGATT+TGG | 0.329693 | tig0024137:+60580 | Msa1414640:CDS |
| CTTGAAGGATACCGGTTATT+GGG | 0.330056 | tig0024137:+61359 | Msa1414640:CDS |
| ACAAAGCAAGCAAACCAATT+TGG | 0.333946 | tig0024137:-59376 | None:intergenic |
| GCTTCATTGTGCTCATTAGA+AGG | 0.334639 | tig0024137:-60982 | None:intergenic |
| CAATTGGACCACGGCATAAC+CGG | 0.343829 | tig0024137:-62315 | None:intergenic |
| TGCTGAAGTTCTAAATCATT+TGG | 0.347676 | tig0024137:-61552 | None:intergenic |
| GGTTTGATACCTCAGTTATC+TGG | 0.350558 | tig0024137:+61804 | Msa1414640:CDS |
| TTCAAACCATTTAAACCAAT+TGG | 0.351269 | tig0024137:+60367 | Msa1414640:CDS |
| AGCTGGGTGCCTTCACTGTC+AGG | 0.364707 | tig0024137:+62281 | Msa1414640:CDS |
| TATCCTTCAAGCTAGATAAC+TGG | 0.365811 | tig0024137:-61347 | None:intergenic |
| TCAAAATCTCTTCGCATTGT+AGG | 0.366852 | tig0024137:-60436 | None:intergenic |
| CGCTTGATGGATGCTTGTTT+AGG | 0.369232 | tig0024137:+60847 | Msa1414640:CDS |
| ATGAGTTTGCTATCATGAAT+AGG | 0.374508 | tig0024137:-62041 | None:intergenic |
| GTGGCTAATGAAACATAATA+TGG | 0.377198 | tig0024137:-61186 | None:intergenic |
| TTTATGTTAACAAGAATGAT+TGG | 0.381468 | tig0024137:+60893 | Msa1414640:CDS |
| TGTTGCTTGGGAATGCTTGA+AGG | 0.386263 | tig0024137:+60474 | Msa1414640:CDS |
| TATTCAAGTGGGAAAGGAAT+TGG | 0.390968 | tig0024137:+60603 | Msa1414640:CDS |
| GACTTCAGGTATAAGTTTGA+TGG | 0.395063 | tig0024137:+61314 | Msa1414640:CDS |
| CAAATTTGTTTACTGTCTCC+AGG | 0.397324 | tig0024137:+61484 | Msa1414640:CDS |
| CAGGTATAAGTTTGATGGGT+TGG | 0.400012 | tig0024137:+61319 | Msa1414640:CDS |
| TGTACTTTCTTGAACTTGAT+AGG | 0.401899 | tig0024137:+60197 | Msa1414640:CDS |
| GATGATTTACTTTCAACTAA+AGG | 0.402020 | tig0024137:-59091 | None:intergenic |
| TGCCATGTGTCTTGCAGAAA+AGG | 0.402782 | tig0024137:+61677 | Msa1414640:CDS |
| TGTTACGTCCCAAGGTGTAT+TGG | 0.407057 | tig0024137:-62090 | None:intergenic |
| GCTTGAAGAATGTAGCTTAT+CGG | 0.408674 | tig0024137:+61826 | Msa1414640:CDS |
| CGGTTATTGGGTGTGGAAAT+GGG | 0.414784 | tig0024137:+61371 | Msa1414640:CDS |
| TAAATAGAAGTGAGGTGAAA+TGG | 0.417307 | tig0024137:+62789 | Msa1414640:three_prime_UTR |
| CTTTCTTGAACTTGATAGGC+AGG | 0.417473 | tig0024137:+60201 | Msa1414640:CDS |
| GAACACTGGTACACCTTCTC+AGG | 0.421632 | tig0024137:+61146 | Msa1414640:CDS |
| CAAATGGGAAGTGAAATAAA+AGG | 0.421987 | tig0024137:-62125 | None:intergenic |
| CGGTTATGCCGTGGTCCAAT+TGG | 0.422848 | tig0024137:+62316 | Msa1414640:CDS |
| GGAGGGCATTCTTTAGGTGC+TGG | 0.423182 | tig0024137:+60574 | Msa1414640:CDS |
| TTGTGTGGGCTTATACTTGA+AGG | 0.432168 | tig0024137:-60269 | None:intergenic |
| GTTTCACTTGCTATGAGCCT+TGG | 0.434142 | tig0024137:+60673 | Msa1414640:CDS |
| CTCTTGTCAGCATACAGATA+TGG | 0.434564 | tig0024137:-62530 | None:intergenic |
| CCGTGGTCCAATTGGTTCCT+AGG | 0.434775 | tig0024137:+62324 | Msa1414640:CDS |
| TACTTCCGGTGTTGGTTTGA+AGG | 0.434795 | tig0024137:+61782 | Msa1414640:CDS |
| GTTTAAGTTCTTAAAACTCT+AGG | 0.441325 | tig0024137:+62716 | Msa1414640:three_prime_UTR |
| AATTGGTTCCTAGGCAACTT+AGG | 0.442386 | tig0024137:+62333 | Msa1414640:CDS |
| CCATTTCCACACCCAATAAC+CGG | 0.442745 | tig0024137:-61370 | None:intergenic |
| TCTGATACTATCGAGACAAA+TGG | 0.443227 | tig0024137:-62141 | None:intergenic |
| TTTCGGTGCAATATTTGAAT+GGG | 0.446693 | tig0024137:+60321 | Msa1414640:CDS |
| TCTGAGTGCTAAAACAGCTC+TGG | 0.447876 | tig0024137:-60395 | None:intergenic |
| AGCTTATCGGGTGTGCGAAT+GGG | 0.447934 | tig0024137:+61839 | Msa1414640:CDS |
| TCCTTCAAGCAGTGAATCTC+GGG | 0.448588 | tig0024137:+61740 | Msa1414640:CDS |
| CTGCTCACGGCTTGCAACAA+TGG | 0.449740 | tig0024137:+61991 | Msa1414640:CDS |
| CTTTGTGATAACATACAACT+TGG | 0.450055 | tig0024137:-61004 | None:intergenic |
| ACCTTCATTATCTGGCTTGA+AGG | 0.450507 | tig0024137:+62478 | Msa1414640:CDS |
| ACCCGAGATTCACTGCTTGA+AGG | 0.451306 | tig0024137:-61741 | None:intergenic |
| CAAAATCTCTTCGCATTGTA+GGG | 0.452318 | tig0024137:-60435 | None:intergenic |
| GTTGCTCCAGCCACGAGCCT+TGG | 0.458204 | tig0024137:+62368 | Msa1414640:CDS |
| CTGAACTTCCTTGCAGCTCA+TGG | 0.458712 | tig0024137:+61513 | Msa1414640:CDS |
| CTTGAAGAATGTAGCTTATC+GGG | 0.459208 | tig0024137:+61827 | Msa1414640:CDS |
| CAGAAATTTCTCGAAGCTCA+TGG | 0.459672 | tig0024137:+61033 | Msa1414640:CDS |
| TAGCTTATCGGGTGTGCGAA+TGG | 0.460950 | tig0024137:+61838 | Msa1414640:CDS |
| TTCCTTCAAGCAGTGAATCT+CGG | 0.460978 | tig0024137:+61739 | Msa1414640:CDS |
| CAAGTGTACCATTGAAGAGC+TGG | 0.466299 | tig0024137:+62264 | Msa1414640:CDS |
| CTTGTTCTTCAGTATTTCCA+AGG | 0.467987 | tig0024137:-62385 | None:intergenic |
| GTATTTCCAAGGCTCGTGGC+TGG | 0.470007 | tig0024137:-62374 | None:intergenic |
| CAGAGATTTCTTTCTGCTCA+CGG | 0.476534 | tig0024137:+61978 | Msa1414640:CDS |
| TCTCTCTTGTTCCATCGGTA+TGG | 0.476992 | tig0024137:-60933 | None:intergenic |
| TGCTGAAGTTCTGCATCACT+TGG | 0.477143 | tig0024137:-62017 | None:intergenic |
| TTTATACACCAATACACCTT+GGG | 0.480101 | tig0024137:+62082 | Msa1414640:CDS |
| TAAGTTGCCTAGGAACCAAT+TGG | 0.481654 | tig0024137:-62331 | None:intergenic |
| ACTTGAGGTTCACTACTTGA+AGG | 0.482250 | tig0024137:-60748 | None:intergenic |
| AGGATACCGGTTATTGGGTG+TGG | 0.485209 | tig0024137:+61364 | Msa1414640:CDS |
| CTGTCAGGCCTCAGGGATAC+CGG | 0.485436 | tig0024137:+62296 | Msa1414640:CDS |
| ACAGCTCTGGGAGCACCAAT+TGG | 0.487086 | tig0024137:-60382 | None:intergenic |
| TTCATCAATCAATATTTGTG+TGG | 0.487447 | tig0024137:-60284 | None:intergenic |
| GCCTTCACTGTCAGGCCTCA+GGG | 0.487725 | tig0024137:+62289 | Msa1414640:CDS |
| TCTATACACCGGTTCACCTT+GGG | 0.488752 | tig0024137:+61617 | Msa1414640:CDS |
| TGTGAGATTTAAAGTAGCTA+TGG | 0.489698 | tig0024137:+60501 | Msa1414640:CDS |
| AAACTCATAAGCAGGCGAAC+TGG | 0.491628 | tig0024137:+62056 | Msa1414640:CDS |
| GGGACTTCATTGATTCTAGC+TGG | 0.493150 | tig0024137:+59149 | Msa1414640:CDS |
| GGTTACAATACTTCCGGTGT+TGG | 0.494372 | tig0024137:+61774 | Msa1414640:CDS |
| AGCCATTGCAAGTCTTATAC+AGG | 0.495279 | tig0024137:+60171 | Msa1414640:CDS |
| GATGTTCTCTCTTGTTCCAT+CGG | 0.496658 | tig0024137:-60938 | None:intergenic |
| TTATCTAGCTTGAAGGATAC+CGG | 0.497729 | tig0024137:+61351 | Msa1414640:CDS |
| ACCCCAGTTATCTAGCTTGA+AGG | 0.497805 | tig0024137:+61344 | Msa1414640:CDS |
| CTCTATACACCGGTTCACCT+TGG | 0.500163 | tig0024137:+61616 | Msa1414640:CDS |
| ACTTCCGGTGTTGGTTTGAA+GGG | 0.501655 | tig0024137:+61783 | Msa1414640:CDS |
| CTGATACTATCGAGACAAAT+GGG | 0.503813 | tig0024137:-62140 | None:intergenic |
| TCATCAATCAATATTTGTGT+GGG | 0.503887 | tig0024137:-60283 | None:intergenic |
| GATAAATACCTAAGTTGCCT+AGG | 0.506284 | tig0024137:-62341 | None:intergenic |
| ACAAGACTTCATTCCAGAGT+TGG | 0.509009 | tig0024137:+62453 | Msa1414640:CDS |
| AGCAGAAATGTATGCATTGG+AGG | 0.512323 | tig0024137:+60556 | Msa1414640:CDS |
| ACTTCAGGTATAAGTTTGAT+GGG | 0.514160 | tig0024137:+61315 | Msa1414640:CDS |
| GAAGGCACCCAGCTCTTCAA+TGG | 0.515579 | tig0024137:-62272 | None:intergenic |
| AGGGTCCTTTGCAATAACAT+AGG | 0.518536 | tig0024137:+62591 | Msa1414640:exon |
| AATGATGGTTACAATACTTC+CGG | 0.524409 | tig0024137:+61768 | Msa1414640:CDS |
| TTCACTGCTTGAAGGAAGCA+TGG | 0.524986 | tig0024137:-61733 | None:intergenic |
| CTTTATACACCAATACACCT+TGG | 0.524989 | tig0024137:+62081 | Msa1414640:CDS |
| TTAAATCCATTGTTAACTTG+AGG | 0.526347 | tig0024137:-62619 | None:intergenic |
| TGTGTGCCTCATCATATAAG+TGG | 0.526824 | tig0024137:+61261 | Msa1414640:CDS |
| GGAAGCAGAAATGTATGCAT+TGG | 0.529257 | tig0024137:+60553 | Msa1414640:CDS |
| CAGCTCATGGTTTGGAACAA+TGG | 0.530134 | tig0024137:+61526 | Msa1414640:CDS |
| ATAATGAAGGTATCCAACTC+TGG | 0.532180 | tig0024137:-62466 | None:intergenic |
| CACAGAAGAGGAGGTTGACA+AGG | 0.533386 | tig0024137:+61893 | Msa1414640:CDS |
| TGCTCACAAATTTGCTATTG+CGG | 0.533627 | tig0024137:-61107 | None:intergenic |
| GTGCAATATTTGAATGGGAT+CGG | 0.533820 | tig0024137:+60326 | Msa1414640:CDS |
| ATCCTTCAAGCTAGATAACT+GGG | 0.536251 | tig0024137:-61346 | None:intergenic |
| ATAAAGAAACATTATTACAT+AGG | 0.537365 | tig0024137:+59017 | Msa1414640:five_prime_UTR |
| GAATCTCGGGTGCTCAATGA+TGG | 0.537378 | tig0024137:+61753 | Msa1414640:CDS |
| AACGACGGACAAATGACTTC+AGG | 0.539145 | tig0024137:+61300 | Msa1414640:CDS |
| ATGATAGCAAACTCATAAGC+AGG | 0.543690 | tig0024137:+62048 | Msa1414640:CDS |
| AGCATTCCCAAGCAACAAAA+CGG | 0.544874 | tig0024137:-60468 | None:intergenic |
| CAACTTAAATCTTTGAACAC+TGG | 0.546107 | tig0024137:+61132 | Msa1414640:CDS |
| GTTTGCCATCGTTGTAACAA+AGG | 0.549344 | tig0024137:-59053 | None:intergenic |
| CTGAGTGCTAAAACAGCTCT+GGG | 0.549864 | tig0024137:-60394 | None:intergenic |
| ATTTGGTATTCAAGTGGGAA+AGG | 0.551039 | tig0024137:+60597 | Msa1414640:CDS |
| TGTCGTGAAGATGGTTAGAA+AGG | 0.551376 | tig0024137:+61428 | Msa1414640:CDS |
| TTCAGTATTTCCAAGGCTCG+TGG | 0.551596 | tig0024137:-62378 | None:intergenic |
| TGCTGGATTTGGTATTCAAG+TGG | 0.552441 | tig0024137:+60591 | Msa1414640:CDS |
| TCTTTCAAGTAGTGAAACTC+AGG | 0.553879 | tig0024137:+62211 | Msa1414640:CDS |
| AAGGAAGTTCAGTTGTTCCC+TGG | 0.555227 | tig0024137:-61502 | None:intergenic |
| AAGCTCATGGCTTGAAACAA+TGG | 0.556200 | tig0024137:+61046 | Msa1414640:CDS |
| TGTGTGGGCTTATACTTGAA+GGG | 0.556397 | tig0024137:-60268 | None:intergenic |
| GTGATGGAAAACTCATAAGA+AGG | 0.559123 | tig0024137:+61583 | Msa1414640:CDS |
| AAATCAGTGTATGATACGTA+TGG | 0.561870 | tig0024137:+60532 | Msa1414640:CDS |
| TAGAAAAGTACTACCTGAGA+AGG | 0.565700 | tig0024137:-61159 | None:intergenic |
| AAATTTGTTTACTGTCTCCA+GGG | 0.565902 | tig0024137:+61485 | Msa1414640:CDS |
| TGATCACAACTCTTAATTGG+AGG | 0.567969 | tig0024137:+59128 | Msa1414640:CDS |
| TCTAATATTTATGTGACGAG+TGG | 0.571796 | tig0024137:-61205 | None:intergenic |
| CTCACGGCTTGCAACAATGG+TGG | 0.572765 | tig0024137:+61994 | Msa1414640:CDS |
| GGCAAAGGAAATGATTAATG+TGG | 0.573590 | tig0024137:+60624 | Msa1414640:CDS |
| CAAGAATTGTGGCACAGAAG+AGG | 0.573673 | tig0024137:+61881 | Msa1414640:CDS |
| GGGTCCTTTGCAATAACATA+GGG | 0.575469 | tig0024137:+62592 | Msa1414640:exon |
| CTGTATGCTAATGAGAATGT+TGG | 0.580429 | tig0024137:+61402 | Msa1414640:CDS |
| TCCTTCAAGCCAGATAATGA+AGG | 0.583160 | tig0024137:-62479 | None:intergenic |
| TGTTGGCGCTGTCGTGAAGA+TGG | 0.583445 | tig0024137:+61419 | Msa1414640:CDS |
| GCTGGATTTGGTATTCAAGT+GGG | 0.587303 | tig0024137:+60592 | Msa1414640:CDS |
| GGAGGTTGACAAGGAGAATG+TGG | 0.588267 | tig0024137:+61902 | Msa1414640:CDS |
| GATTTACCACTTATATGATG+AGG | 0.590671 | tig0024137:-61267 | None:intergenic |
| TGGGTTCCTCATCTGTATGT+TGG | 0.593149 | tig0024137:+61858 | Msa1414640:CDS |
| GATCACAACTCTTAATTGGA+GGG | 0.594082 | tig0024137:+59129 | Msa1414640:CDS |
| CTTCAGCAAACTATCCGTGA+TGG | 0.594715 | tig0024137:+61567 | Msa1414640:CDS |
| GCTCGTGGCTGGAGCAACAA+AGG | 0.597100 | tig0024137:-62363 | None:intergenic |
| TATTGATTGATGAAAGAGAT+GGG | 0.597435 | tig0024137:+60293 | Msa1414640:CDS |
| AAGTGTACCATTGAAGAGCT+GGG | 0.601631 | tig0024137:+62265 | Msa1414640:CDS |
| GAGAATATGGATCATGAAGA+CGG | 0.602100 | tig0024137:+61450 | Msa1414640:CDS |
| TGTTCCCTATGTTATTGCAA+AGG | 0.602792 | tig0024137:-62596 | None:intergenic |
| CTGTATGTTGGCAAGAATTG+TGG | 0.603147 | tig0024137:+61870 | Msa1414640:CDS |
| GATTTACTTTCAACTAAAGG+AGG | 0.604115 | tig0024137:-59088 | None:intergenic |
| TTCTCATTAGCATACAGAAG+AGG | 0.607136 | tig0024137:-61396 | None:intergenic |
| ACCTCAAGTCAGCATTGATG+TGG | 0.612184 | tig0024137:+60762 | Msa1414640:CDS |
| AGGATCCATATTCTCCACAT+TGG | 0.613667 | tig0024137:-60962 | None:intergenic |
| CAGGGATACCGGTTATGCCG+TGG | 0.613998 | tig0024137:+62307 | Msa1414640:CDS |
| TGCCTGTATAAGACTTGCAA+TGG | 0.616517 | tig0024137:-60173 | None:intergenic |
| GATGGTTGACAAAGAGAACA+AGG | 0.618389 | tig0024137:+62571 | Msa1414640:CDS |
| TGGTGGAAAAGACGACAAGA+TGG | 0.619277 | tig0024137:+62553 | Msa1414640:CDS |
| GAATTGTGGCACAGAAGAGG+AGG | 0.621076 | tig0024137:+61884 | Msa1414640:CDS |
| TCCACATCAATGCTGACTTG+AGG | 0.623615 | tig0024137:-60763 | None:intergenic |
| CTCATGGTTTGGAACAATGG+TGG | 0.626885 | tig0024137:+61529 | Msa1414640:CDS |
| AGTGGGAAAGGAATTGGCAA+AGG | 0.630778 | tig0024137:+60609 | Msa1414640:CDS |
| GCAGAAATGTATGCATTGGA+GGG | 0.630869 | tig0024137:+60557 | Msa1414640:CDS |
| GTTCCAAACCATGAGCTGCA+AGG | 0.631713 | tig0024137:-61521 | None:intergenic |
| AAACAATGGTGGTCAAGTGA+CGG | 0.632207 | tig0024137:+61060 | Msa1414640:CDS |
| CAAATTAAATCTCTATACAC+CGG | 0.632498 | tig0024137:+61606 | Msa1414640:CDS |
| AGAAACCTTTGTTACAACGA+TGG | 0.639970 | tig0024137:+59048 | Msa1414640:exon |
| ATATTGATTGATGAAAGAGA+TGG | 0.641336 | tig0024137:+60292 | Msa1414640:CDS |
| TCCATCAAGCGCGATAAACG+AGG | 0.644282 | tig0024137:-60835 | None:intergenic |
| AAGAGAGAACATCGCCAATG+TGG | 0.644761 | tig0024137:+60948 | Msa1414640:CDS |
| GGAACACCTCAAGTTAACAA+TGG | 0.646064 | tig0024137:+62613 | Msa1414640:three_prime_UTR |
| TGATGTGGACGAGACTTATG+TGG | 0.646267 | tig0024137:+60777 | Msa1414640:CDS |
| CTCATAGCAAGTGAAACAGA+AGG | 0.653693 | tig0024137:-60667 | None:intergenic |
| TCCCTGAGGCCTGACAGTGA+AGG | 0.656091 | tig0024137:-62290 | None:intergenic |
| CTAAAGGAGGAACAACAACA+TGG | 0.656560 | tig0024137:-59075 | None:intergenic |
| TTCTTGTTAACATAAAGATG+AGG | 0.656648 | tig0024137:-60886 | None:intergenic |
| CTCATGGCTTGAAACAATGG+TGG | 0.660620 | tig0024137:+61049 | Msa1414640:CDS |
| TTCTTGCCAACATACAGATG+AGG | 0.662002 | tig0024137:-61864 | None:intergenic |
| CAAACCCTTCAAACCAACAC+CGG | 0.663576 | tig0024137:-61787 | None:intergenic |
| ATAGCAAGTGAAACAGAAGG+TGG | 0.668464 | tig0024137:-60664 | None:intergenic |
| CTGTATGCTGACAAGAGTGG+TGG | 0.669477 | tig0024137:+62536 | Msa1414640:CDS |
| TATTCGTCTAAATAGAAGTG+AGG | 0.671454 | tig0024137:+62781 | Msa1414640:three_prime_UTR |
| AAATCTCAAATCATCAACGA+CGG | 0.700893 | tig0024137:+61285 | Msa1414640:CDS |
| CCTAGGAACCAATTGGACCA+CGG | 0.706088 | tig0024137:-62324 | None:intergenic |
| TTCTTCAAGCCAGATAACTG+AGG | 0.718042 | tig0024137:-61813 | None:intergenic |
| CGGCATAACCGGTATCCCTG+AGG | 0.720056 | tig0024137:-62304 | None:intergenic |
| TCCTTCAAGCTAGATAACTG+GGG | 0.720408 | tig0024137:-61345 | None:intergenic |
| ATGGTTGACAAAGAGAACAA+GGG | 0.722106 | tig0024137:+62572 | Msa1414640:CDS |
| AGAGTTGTGATCATGTTACG+AGG | 0.726905 | tig0024137:-59118 | None:intergenic |
| TATCTGTATGCTGACAAGAG+TGG | 0.771941 | tig0024137:+62533 | Msa1414640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAGTTATTTTTATTTTTTTT+TGG | + | tig0024137:59897-59916 | Msa1414640:intron | 10.0% |
| !! | TGTAATAATGTTTCTTTATT+TGG | - | tig0024137:59016-59035 | None:intergenic | 15.0% |
| !! | ATAAAGAAACATTATTACAT+AGG | + | tig0024137:59017-59036 | Msa1414640:five_prime_UTR | 15.0% |
| !! | TATTAATCTATGAAATGAAA+TGG | - | tig0024137:59182-59201 | None:intergenic | 15.0% |
| !! | AACATTATTACATAGGAAAT+TGG | + | tig0024137:59024-59043 | Msa1414640:five_prime_UTR | 20.0% |
| !!! | ATTTCTTGTTGATGTTTTTT+AGG | + | tig0024137:59304-59323 | Msa1414640:intron | 20.0% |
| !!! | TTCATTTCTCAAATTTTTAC+TGG | + | tig0024137:59739-59758 | Msa1414640:intron | 20.0% |
| !! | TATAATGTCAGTTATATTCA+TGG | + | tig0024137:59926-59945 | Msa1414640:intron | 20.0% |
| !!! | ATTCATGGTTTTTTATTGTA+TGG | + | tig0024137:59941-59960 | Msa1414640:intron | 20.0% |
| !!! | TTTGAAACAAAACAATTATC+AGG | - | tig0024137:60124-60143 | None:intergenic | 20.0% |
| !!! | ATAATTGTTTTGTTTCAAAC+AGG | + | tig0024137:60125-60144 | Msa1414640:intron | 20.0% |
| !! | TTTATGTTAACAAGAATGAT+TGG | + | tig0024137:60893-60912 | Msa1414640:CDS | 20.0% |
| !!! | GACAAAAAGAAGAATTTTTA+TGG | + | tig0024137:62162-62181 | Msa1414640:CDS | 20.0% |
| !!! | AAGAAGAATTTTTATGGAAA+TGG | + | tig0024137:62168-62187 | Msa1414640:CDS | 20.0% |
| ! | GATGATTTACTTTCAACTAA+AGG | - | tig0024137:59094-59113 | None:intergenic | 25.0% |
| ! | AGTTGAAAACTTTACCAAAT+TGG | + | tig0024137:59362-59381 | Msa1414640:CDS | 25.0% |
| !!! | TAACAGACTTTTTCCATTTA+CGG | - | tig0024137:59435-59454 | None:intergenic | 25.0% |
| !!! | TATTTTTTCATCAGCAATTG+TGG | - | tig0024137:59506-59525 | None:intergenic | 25.0% |
| ! | AGTCCTTAGAATCTTTATAA+GGG | - | tig0024137:59621-59640 | None:intergenic | 25.0% |
| ! | AAGTCCTTAGAATCTTTATA+AGG | - | tig0024137:59622-59641 | None:intergenic | 25.0% |
| !!! | ATGCTTTTAATCTAAAGTGT+CGG | - | tig0024137:59689-59708 | None:intergenic | 25.0% |
| ! | TCATCAATCAATATTTGTGT+GGG | - | tig0024137:60286-60305 | None:intergenic | 25.0% |
| ! | TTCATCAATCAATATTTGTG+TGG | - | tig0024137:60287-60306 | None:intergenic | 25.0% |
| !! | ATATTGATTGATGAAAGAGA+TGG | + | tig0024137:60292-60311 | Msa1414640:CDS | 25.0% |
| !! | TATTGATTGATGAAAGAGAT+GGG | + | tig0024137:60293-60312 | Msa1414640:CDS | 25.0% |
| ! | TTCAAACCATTTAAACCAAT+TGG | + | tig0024137:60367-60386 | Msa1414640:CDS | 25.0% |
| ! | TTCTTGTTAACATAAAGATG+AGG | - | tig0024137:60889-60908 | None:intergenic | 25.0% |
| ! | CAAATTAAATCTCTATACAC+CGG | + | tig0024137:61606-61625 | Msa1414640:CDS | 25.0% |
| ! | GAAGTAAAAAAAGGATCAAA+TGG | + | tig0024137:61639-61658 | Msa1414640:CDS | 25.0% |
| ! | CAGAAAAGGAAGAATTTATA+TGG | + | tig0024137:61691-61710 | Msa1414640:CDS | 25.0% |
| !! | TTAAATCCATTGTTAACTTG+AGG | - | tig0024137:62622-62641 | None:intergenic | 25.0% |
| ! | CATTGTTAAGATTGAAAACT+TGG | - | tig0024137:62664-62683 | None:intergenic | 25.0% |
| !! | GTTTAAGTTCTTAAAACTCT+AGG | + | tig0024137:62716-62735 | Msa1414640:three_prime_UTR | 25.0% |
| ! | TTGATACTTCTTAAAGCTAT+TGG | - | tig0024137:62752-62771 | None:intergenic | 25.0% |
| GATTTACTTTCAACTAAAGG+AGG | - | tig0024137:59091-59110 | None:intergenic | 30.0% | |
| ACATGATCACAACTCTTAAT+TGG | + | tig0024137:59125-59144 | Msa1414640:CDS | 30.0% | |
| !!! | GTTGATGTTTTTTAGGATGT+TGG | + | tig0024137:59311-59330 | Msa1414640:intron | 30.0% |
| !!! | GTCTTGTTTTAGAACATTGT+TGG | + | tig0024137:59464-59483 | Msa1414640:intron | 30.0% |
| AACCCCTTATAAAGATTCTA+AGG | + | tig0024137:59615-59634 | Msa1414640:intron | 30.0% | |
| GTCCTTAGAATCTTTATAAG+GGG | - | tig0024137:59620-59639 | None:intergenic | 30.0% | |
| GTGATTGAATGTAATCAGAT+TGG | - | tig0024137:59718-59737 | None:intergenic | 30.0% | |
| ! | TCTCAAATTTTTACTGGTGA+CGG | + | tig0024137:59745-59764 | Msa1414640:intron | 30.0% |
| AACTCATTCTGTATTTGACT+TGG | + | tig0024137:59819-59838 | Msa1414640:intron | 30.0% | |
| !!! | TTGTTTTGTTTCAAACAGGA+AGG | + | tig0024137:60129-60148 | Msa1414640:intron | 30.0% |
| TGTACTTTCTTGAACTTGAT+AGG | + | tig0024137:60197-60216 | Msa1414640:CDS | 30.0% | |
| !! | TTTTCGGTGCAATATTTGAA+TGG | + | tig0024137:60320-60339 | Msa1414640:CDS | 30.0% |
| ! | TTTCGGTGCAATATTTGAAT+GGG | + | tig0024137:60321-60340 | Msa1414640:CDS | 30.0% |
| ! | TGTGAGATTTAAAGTAGCTA+TGG | + | tig0024137:60501-60520 | Msa1414640:CDS | 30.0% |
| AAATCAGTGTATGATACGTA+TGG | + | tig0024137:60532-60551 | Msa1414640:CDS | 30.0% | |
| !!! | CCTTTTTTCCAATATTTCCA+AGG | - | tig0024137:60693-60712 | None:intergenic | 30.0% |
| CCTTGGAAATATTGGAAAAA+AGG | + | tig0024137:60690-60709 | Msa1414640:CDS | 30.0% | |
| GAAAAAAGGCTGAATATGTT+TGG | + | tig0024137:60704-60723 | Msa1414640:CDS | 30.0% | |
| TTGTTTAGGAAGCGAAAAAT+GGG | + | tig0024137:60861-60880 | Msa1414640:CDS | 30.0% | |
| ! | TACTTTTATATCCATACCGA+TGG | + | tig0024137:60922-60941 | Msa1414640:CDS | 30.0% |
| CTTTGTGATAACATACAACT+TGG | - | tig0024137:61007-61026 | None:intergenic | 30.0% | |
| CAACTTAAATCTTTGAACAC+TGG | + | tig0024137:61132-61151 | Msa1414640:CDS | 30.0% | |
| GTGGCTAATGAAACATAATA+TGG | - | tig0024137:61189-61208 | None:intergenic | 30.0% | |
| TCTAATATTTATGTGACGAG+TGG | - | tig0024137:61208-61227 | None:intergenic | 30.0% | |
| GAGAAGTGACATATTATGTT+TGG | + | tig0024137:61226-61245 | Msa1414640:CDS | 30.0% | |
| GATTTACCACTTATATGATG+AGG | - | tig0024137:61270-61289 | None:intergenic | 30.0% | |
| AAATCTCAAATCATCAACGA+CGG | + | tig0024137:61285-61304 | Msa1414640:CDS | 30.0% | |
| ACTTCAGGTATAAGTTTGAT+GGG | + | tig0024137:61315-61334 | Msa1414640:CDS | 30.0% | |
| ! | AAATTTGTTTACTGTCTCCA+GGG | + | tig0024137:61485-61504 | Msa1414640:CDS | 30.0% |
| !! | TGCTGAAGTTCTAAATCATT+TGG | - | tig0024137:61555-61574 | None:intergenic | 30.0% |
| ! | TTCTTATGAGTTTTCCATCA+CGG | - | tig0024137:61584-61603 | None:intergenic | 30.0% |
| AATGATGGTTACAATACTTC+CGG | + | tig0024137:61768-61787 | Msa1414640:CDS | 30.0% | |
| !! | ATGAGTTTGCTATCATGAAT+AGG | - | tig0024137:62044-62063 | None:intergenic | 30.0% |
| TTTATACACCAATACACCTT+GGG | + | tig0024137:62082-62101 | Msa1414640:CDS | 30.0% | |
| CAAATGGGAAGTGAAATAAA+AGG | - | tig0024137:62128-62147 | None:intergenic | 30.0% | |
| TATTCGTCTAAATAGAAGTG+AGG | + | tig0024137:62781-62800 | Msa1414640:three_prime_UTR | 30.0% | |
| TAAATAGAAGTGAGGTGAAA+TGG | + | tig0024137:62789-62808 | Msa1414640:three_prime_UTR | 30.0% | |
| AGAAACCTTTGTTACAACGA+TGG | + | tig0024137:59048-59067 | Msa1414640:exon | 35.0% | |
| TGATCACAACTCTTAATTGG+AGG | + | tig0024137:59128-59147 | Msa1414640:CDS | 35.0% | |
| GATCACAACTCTTAATTGGA+GGG | + | tig0024137:59129-59148 | Msa1414640:CDS | 35.0% | |
| !!! | TTTTTAGGATGTTGGCAACA+TGG | + | tig0024137:59319-59338 | Msa1414640:intron | 35.0% |
| !!! | TTTTAGGATGTTGGCAACAT+GGG | + | tig0024137:59320-59339 | Msa1414640:intron | 35.0% |
| ACAAAGCAAGCAAACCAATT+TGG | - | tig0024137:59379-59398 | None:intergenic | 35.0% | |
| AAGTAACCAACAACCGTAAA+TGG | + | tig0024137:59419-59438 | Msa1414640:intron | 35.0% | |
| ! | CTTTTTCCATTTACGGTTGT+TGG | - | tig0024137:59428-59447 | None:intergenic | 35.0% |
| GAGCTTCTCGATTAAAAACT+AGG | - | tig0024137:59783-59802 | None:intergenic | 35.0% | |
| ! | GAAAGAGATGGGTCAATTTT+CGG | + | tig0024137:60304-60323 | Msa1414640:CDS | 35.0% |
| GTGCAATATTTGAATGGGAT+CGG | + | tig0024137:60326-60345 | Msa1414640:CDS | 35.0% | |
| CAAAATCTCTTCGCATTGTA+GGG | - | tig0024137:60438-60457 | None:intergenic | 35.0% | |
| TCAAAATCTCTTCGCATTGT+AGG | - | tig0024137:60439-60458 | None:intergenic | 35.0% | |
| ATTTGGTATTCAAGTGGGAA+AGG | + | tig0024137:60597-60616 | Msa1414640:CDS | 35.0% | |
| TATTCAAGTGGGAAAGGAAT+TGG | + | tig0024137:60603-60622 | Msa1414640:CDS | 35.0% | |
| GGCAAAGGAAATGATTAATG+TGG | + | tig0024137:60624-60643 | Msa1414640:CDS | 35.0% | |
| CTTGTTTAGGAAGCGAAAAA+TGG | + | tig0024137:60860-60879 | Msa1414640:CDS | 35.0% | |
| !! | TGCTCACAAATTTGCTATTG+CGG | - | tig0024137:61110-61129 | None:intergenic | 35.0% |
| !! | TAGAAAAGTACTACCTGAGA+AGG | - | tig0024137:61162-61181 | None:intergenic | 35.0% |
| GACTTCAGGTATAAGTTTGA+TGG | + | tig0024137:61314-61333 | Msa1414640:CDS | 35.0% | |
| ATCCTTCAAGCTAGATAACT+GGG | - | tig0024137:61349-61368 | None:intergenic | 35.0% | |
| TATCCTTCAAGCTAGATAAC+TGG | - | tig0024137:61350-61369 | None:intergenic | 35.0% | |
| ! | TTATCTAGCTTGAAGGATAC+CGG | + | tig0024137:61351-61370 | Msa1414640:CDS | 35.0% |
| TTCTCATTAGCATACAGAAG+AGG | - | tig0024137:61399-61418 | None:intergenic | 35.0% | |
| CTGTATGCTAATGAGAATGT+TGG | + | tig0024137:61402-61421 | Msa1414640:CDS | 35.0% | |
| GATGGTTAGAAAGGAGAATA+TGG | + | tig0024137:61437-61456 | Msa1414640:CDS | 35.0% | |
| GAGAATATGGATCATGAAGA+CGG | + | tig0024137:61450-61469 | Msa1414640:CDS | 35.0% | |
| ! | CAAATTTGTTTACTGTCTCC+AGG | + | tig0024137:61484-61503 | Msa1414640:CDS | 35.0% |
| ! | GTGATGGAAAACTCATAAGA+AGG | + | tig0024137:61583-61602 | Msa1414640:CDS | 35.0% |
| TCACCTTGGGAAGTAAAAAA+AGG | + | tig0024137:61630-61649 | Msa1414640:CDS | 35.0% | |
| !!! | GATCCTTTTTTTACTTCCCA+AGG | - | tig0024137:61636-61655 | None:intergenic | 35.0% |
| GCTTGAAGAATGTAGCTTAT+CGG | + | tig0024137:61826-61845 | Msa1414640:CDS | 35.0% | |
| CTTGAAGAATGTAGCTTATC+GGG | + | tig0024137:61827-61846 | Msa1414640:CDS | 35.0% | |
| ! | GCAGTAATTTTCTCATTTGC+AGG | - | tig0024137:61930-61949 | None:intergenic | 35.0% |
| AAGAAATCTCTGCTGTTCTT+TGG | - | tig0024137:61970-61989 | None:intergenic | 35.0% | |
| ATGATAGCAAACTCATAAGC+AGG | + | tig0024137:62048-62067 | Msa1414640:CDS | 35.0% | |
| CTTTATACACCAATACACCT+TGG | + | tig0024137:62081-62100 | Msa1414640:CDS | 35.0% | |
| ! | AATCTTTTTGTTACGTCCCA+AGG | - | tig0024137:62101-62120 | None:intergenic | 35.0% |
| CTGATACTATCGAGACAAAT+GGG | - | tig0024137:62143-62162 | None:intergenic | 35.0% | |
| TCTGATACTATCGAGACAAA+TGG | - | tig0024137:62144-62163 | None:intergenic | 35.0% | |
| ! | TCTTTCAAGTAGTGAAACTC+AGG | + | tig0024137:62211-62230 | Msa1414640:CDS | 35.0% |
| GATAAATACCTAAGTTGCCT+AGG | - | tig0024137:62344-62363 | None:intergenic | 35.0% | |
| CTTGTTCTTCAGTATTTCCA+AGG | - | tig0024137:62388-62407 | None:intergenic | 35.0% | |
| !! | ATAATGAAGGTATCCAACTC+TGG | - | tig0024137:62469-62488 | None:intergenic | 35.0% |
| AGTTGGATACCTTCATTATC+TGG | + | tig0024137:62470-62489 | Msa1414640:CDS | 35.0% | |
| ATGGTTGACAAAGAGAACAA+GGG | + | tig0024137:62572-62591 | Msa1414640:CDS | 35.0% | |
| TGTTCCCTATGTTATTGCAA+AGG | - | tig0024137:62599-62618 | None:intergenic | 35.0% | |
| ! | ACTTGGCATTTTGCAAACTA+TGG | - | tig0024137:62647-62666 | None:intergenic | 35.0% |
| GTTTGCCATCGTTGTAACAA+AGG | - | tig0024137:59056-59075 | None:intergenic | 40.0% | |
| CTAAAGGAGGAACAACAACA+TGG | - | tig0024137:59078-59097 | None:intergenic | 40.0% | |
| AGAGTTGTGATCATGTTACG+AGG | - | tig0024137:59121-59140 | None:intergenic | 40.0% | |
| CATGCAATTGCAACTAGTGT+TGG | - | tig0024137:59278-59297 | None:intergenic | 40.0% | |
| AGTCTCTGATTGACAGCATA+AGG | - | tig0024137:59864-59883 | None:intergenic | 40.0% | |
| ! | AGCCATTGCAAGTCTTATAC+AGG | + | tig0024137:60171-60190 | Msa1414640:CDS | 40.0% |
| TGCCTGTATAAGACTTGCAA+TGG | - | tig0024137:60176-60195 | None:intergenic | 40.0% | |
| CTTTCTTGAACTTGATAGGC+AGG | + | tig0024137:60201-60220 | Msa1414640:CDS | 40.0% | |
| TTGAAGGGAATCCAAAAAGC+TGG | - | tig0024137:60256-60275 | None:intergenic | 40.0% | |
| TGTGTGGGCTTATACTTGAA+GGG | - | tig0024137:60271-60290 | None:intergenic | 40.0% | |
| TTGTGTGGGCTTATACTTGA+AGG | - | tig0024137:60272-60291 | None:intergenic | 40.0% | |
| ! | GGAGCACCAATTGGTTTAAA+TGG | - | tig0024137:60376-60395 | None:intergenic | 40.0% |
| !! | ACGATTTCCGTTTTGTTGCT+TGG | + | tig0024137:60461-60480 | Msa1414640:CDS | 40.0% |
| !! | CGATTTCCGTTTTGTTGCTT+GGG | + | tig0024137:60462-60481 | Msa1414640:CDS | 40.0% |
| AGCATTCCCAAGCAACAAAA+CGG | - | tig0024137:60471-60490 | None:intergenic | 40.0% | |
| GGAAGCAGAAATGTATGCAT+TGG | + | tig0024137:60553-60572 | Msa1414640:CDS | 40.0% | |
| AGCAGAAATGTATGCATTGG+AGG | + | tig0024137:60556-60575 | Msa1414640:CDS | 40.0% | |
| GCAGAAATGTATGCATTGGA+GGG | + | tig0024137:60557-60576 | Msa1414640:CDS | 40.0% | |
| !! | CATTCTTTAGGTGCTGGATT+TGG | + | tig0024137:60580-60599 | Msa1414640:CDS | 40.0% |
| ! | TGCTGGATTTGGTATTCAAG+TGG | + | tig0024137:60591-60610 | Msa1414640:CDS | 40.0% |
| ! | GCTGGATTTGGTATTCAAGT+GGG | + | tig0024137:60592-60611 | Msa1414640:CDS | 40.0% |
| ATAGCAAGTGAAACAGAAGG+TGG | - | tig0024137:60667-60686 | None:intergenic | 40.0% | |
| CTCATAGCAAGTGAAACAGA+AGG | - | tig0024137:60670-60689 | None:intergenic | 40.0% | |
| GCTATGAGCCTTGGAAATAT+TGG | + | tig0024137:60682-60701 | Msa1414640:CDS | 40.0% | |
| ACTTGAGGTTCACTACTTGA+AGG | - | tig0024137:60751-60770 | None:intergenic | 40.0% | |
| GATGTTCTCTCTTGTTCCAT+CGG | - | tig0024137:60941-60960 | None:intergenic | 40.0% | |
| AGGATCCATATTCTCCACAT+TGG | - | tig0024137:60965-60984 | None:intergenic | 40.0% | |
| GCTTCATTGTGCTCATTAGA+AGG | - | tig0024137:60985-61004 | None:intergenic | 40.0% | |
| CATGAGCTTCGAGAAATTTC+TGG | - | tig0024137:61035-61054 | None:intergenic | 40.0% | |
| CAGAAATTTCTCGAAGCTCA+TGG | + | tig0024137:61033-61052 | Msa1414640:CDS | 40.0% | |
| AAGCTCATGGCTTGAAACAA+TGG | + | tig0024137:61046-61065 | Msa1414640:CDS | 40.0% | |
| AAACAATGGTGGTCAAGTGA+CGG | + | tig0024137:61060-61079 | Msa1414640:CDS | 40.0% | |
| TGTGTGCCTCATCATATAAG+TGG | + | tig0024137:61261-61280 | Msa1414640:CDS | 40.0% | |
| ! | CAGGTATAAGTTTGATGGGT+TGG | + | tig0024137:61319-61338 | Msa1414640:CDS | 40.0% |
| TCCTTCAAGCTAGATAACTG+GGG | - | tig0024137:61348-61367 | None:intergenic | 40.0% | |
| ! | CTTGAAGGATACCGGTTATT+GGG | + | tig0024137:61359-61378 | Msa1414640:CDS | 40.0% |
| TGTCGTGAAGATGGTTAGAA+AGG | + | tig0024137:61428-61447 | Msa1414640:CDS | 40.0% | |
| ! | TTTTACTTCCCAAGGTGAAC+CGG | - | tig0024137:61628-61647 | None:intergenic | 40.0% |
| ! | TTCCTTTTCTGCAAGACACA+TGG | - | tig0024137:61682-61701 | None:intergenic | 40.0% |
| TTCCTTCAAGCAGTGAATCT+CGG | + | tig0024137:61739-61758 | Msa1414640:CDS | 40.0% | |
| GGTTTGATACCTCAGTTATC+TGG | + | tig0024137:61804-61823 | Msa1414640:CDS | 40.0% | |
| TTCTTCAAGCCAGATAACTG+AGG | - | tig0024137:61816-61835 | None:intergenic | 40.0% | |
| TTCTTGCCAACATACAGATG+AGG | - | tig0024137:61867-61886 | None:intergenic | 40.0% | |
| CTGTATGTTGGCAAGAATTG+TGG | + | tig0024137:61870-61889 | Msa1414640:CDS | 40.0% | |
| CAGAGATTTCTTTCTGCTCA+CGG | + | tig0024137:61978-61997 | Msa1414640:CDS | 40.0% | |
| AAGTGTACCATTGAAGAGCT+GGG | + | tig0024137:62265-62284 | Msa1414640:CDS | 40.0% | |
| TAAGTTGCCTAGGAACCAAT+TGG | - | tig0024137:62334-62353 | None:intergenic | 40.0% | |
| ! | AATTGGTTCCTAGGCAACTT+AGG | + | tig0024137:62333-62352 | Msa1414640:CDS | 40.0% |
| ACAAGACTTCATTCCAGAGT+TGG | + | tig0024137:62453-62472 | Msa1414640:CDS | 40.0% | |
| ! | ACCTTCATTATCTGGCTTGA+AGG | + | tig0024137:62478-62497 | Msa1414640:CDS | 40.0% |
| TCCTTCAAGCCAGATAATGA+AGG | - | tig0024137:62482-62501 | None:intergenic | 40.0% | |
| CTCTTGTCAGCATACAGATA+TGG | - | tig0024137:62533-62552 | None:intergenic | 40.0% | |
| TATCTGTATGCTGACAAGAG+TGG | + | tig0024137:62533-62552 | Msa1414640:CDS | 40.0% | |
| GATGGTTGACAAAGAGAACA+AGG | + | tig0024137:62571-62590 | Msa1414640:CDS | 40.0% | |
| AGGGTCCTTTGCAATAACAT+AGG | + | tig0024137:62591-62610 | Msa1414640:exon | 40.0% | |
| GGGTCCTTTGCAATAACATA+GGG | + | tig0024137:62592-62611 | Msa1414640:exon | 40.0% | |
| GGAACACCTCAAGTTAACAA+TGG | + | tig0024137:62613-62632 | Msa1414640:three_prime_UTR | 40.0% | |
| !! | GGGACTTCATTGATTCTAGC+TGG | + | tig0024137:59149-59168 | Msa1414640:CDS | 45.0% |
| GCTCTTTGTTCGTGTCAACA+CGG | - | tig0024137:59985-60004 | None:intergenic | 45.0% | |
| !! | ACTCTCTAGCTCCAGCTTTT+TGG | + | tig0024137:60242-60261 | Msa1414640:CDS | 45.0% |
| CTGAGTGCTAAAACAGCTCT+GGG | - | tig0024137:60397-60416 | None:intergenic | 45.0% | |
| TCTGAGTGCTAAAACAGCTC+TGG | - | tig0024137:60398-60417 | None:intergenic | 45.0% | |
| !!! | AGAGCTGTTTTAGCACTCAG+AGG | + | tig0024137:60397-60416 | Msa1414640:CDS | 45.0% |
| ! | TGTTGCTTGGGAATGCTTGA+AGG | + | tig0024137:60474-60493 | Msa1414640:CDS | 45.0% |
| !! | TGCATTGGAGGGCATTCTTT+AGG | + | tig0024137:60568-60587 | Msa1414640:CDS | 45.0% |
| AGTGGGAAAGGAATTGGCAA+AGG | + | tig0024137:60609-60628 | Msa1414640:CDS | 45.0% | |
| !! | GTTTCACTTGCTATGAGCCT+TGG | + | tig0024137:60673-60692 | Msa1414640:CDS | 45.0% |
| !! | ACCTCAAGTCAGCATTGATG+TGG | + | tig0024137:60762-60781 | Msa1414640:CDS | 45.0% |
| !! | TCCACATCAATGCTGACTTG+AGG | - | tig0024137:60766-60785 | None:intergenic | 45.0% |
| TGATGTGGACGAGACTTATG+TGG | + | tig0024137:60777-60796 | Msa1414640:CDS | 45.0% | |
| ! | CGCTTGATGGATGCTTGTTT+AGG | + | tig0024137:60847-60866 | Msa1414640:CDS | 45.0% |
| TCTCTCTTGTTCCATCGGTA+TGG | - | tig0024137:60936-60955 | None:intergenic | 45.0% | |
| AAGAGAGAACATCGCCAATG+TGG | + | tig0024137:60948-60967 | Msa1414640:CDS | 45.0% | |
| CATCGCCAATGTGGAGAATA+TGG | + | tig0024137:60957-60976 | Msa1414640:CDS | 45.0% | |
| CTCATGGCTTGAAACAATGG+TGG | + | tig0024137:61049-61068 | Msa1414640:CDS | 45.0% | |
| AACGACGGACAAATGACTTC+AGG | + | tig0024137:61300-61319 | Msa1414640:CDS | 45.0% | |
| ! | ACCCCAGTTATCTAGCTTGA+AGG | + | tig0024137:61344-61363 | Msa1414640:CDS | 45.0% |
| ! | GCTTGAAGGATACCGGTTAT+TGG | + | tig0024137:61358-61377 | Msa1414640:CDS | 45.0% |
| CCATTTCCACACCCAATAAC+CGG | - | tig0024137:61373-61392 | None:intergenic | 45.0% | |
| CGGTTATTGGGTGTGGAAAT+GGG | + | tig0024137:61371-61390 | Msa1414640:CDS | 45.0% | |
| AAGGAAGTTCAGTTGTTCCC+TGG | - | tig0024137:61505-61524 | None:intergenic | 45.0% | |
| ! | CAGCTCATGGTTTGGAACAA+TGG | + | tig0024137:61526-61545 | Msa1414640:CDS | 45.0% |
| ! | CTCATGGTTTGGAACAATGG+TGG | + | tig0024137:61529-61548 | Msa1414640:CDS | 45.0% |
| CTTCAGCAAACTATCCGTGA+TGG | + | tig0024137:61567-61586 | Msa1414640:CDS | 45.0% | |
| !! | TCTATACACCGGTTCACCTT+GGG | + | tig0024137:61617-61636 | Msa1414640:CDS | 45.0% |
| TGCCATGTGTCTTGCAGAAA+AGG | + | tig0024137:61677-61696 | Msa1414640:CDS | 45.0% | |
| TTCACTGCTTGAAGGAAGCA+TGG | - | tig0024137:61736-61755 | None:intergenic | 45.0% | |
| TCCTTCAAGCAGTGAATCTC+GGG | + | tig0024137:61740-61759 | Msa1414640:CDS | 45.0% | |
| GGTTACAATACTTCCGGTGT+TGG | + | tig0024137:61774-61793 | Msa1414640:CDS | 45.0% | |
| !! | TACTTCCGGTGTTGGTTTGA+AGG | + | tig0024137:61782-61801 | Msa1414640:CDS | 45.0% |
| !! | ACTTCCGGTGTTGGTTTGAA+GGG | + | tig0024137:61783-61802 | Msa1414640:CDS | 45.0% |
| CAAACCCTTCAAACCAACAC+CGG | - | tig0024137:61790-61809 | None:intergenic | 45.0% | |
| TGGGTTCCTCATCTGTATGT+TGG | + | tig0024137:61858-61877 | Msa1414640:CDS | 45.0% | |
| CAAGAATTGTGGCACAGAAG+AGG | + | tig0024137:61881-61900 | Msa1414640:CDS | 45.0% | |
| TGCTGAAGTTCTGCATCACT+TGG | - | tig0024137:62020-62039 | None:intergenic | 45.0% | |
| AAACTCATAAGCAGGCGAAC+TGG | + | tig0024137:62056-62075 | Msa1414640:CDS | 45.0% | |
| TGTTACGTCCCAAGGTGTAT+TGG | - | tig0024137:62093-62112 | None:intergenic | 45.0% | |
| CAAGTGTACCATTGAAGAGC+TGG | + | tig0024137:62264-62283 | Msa1414640:CDS | 45.0% | |
| TTCAGTATTTCCAAGGCTCG+TGG | - | tig0024137:62381-62400 | None:intergenic | 45.0% | |
| !!! | GCTTGAAGGATGCTGCTTTT+GGG | + | tig0024137:62492-62511 | Msa1414640:CDS | 45.0% |
| !!! | CTTGAAGGATGCTGCTTTTG+GGG | + | tig0024137:62493-62512 | Msa1414640:CDS | 45.0% |
| !!! | TGCTTTTGGGGTGGGAAAAT+TGG | + | tig0024137:62505-62524 | Msa1414640:CDS | 45.0% |
| TGGTGGAAAAGACGACAAGA+TGG | + | tig0024137:62553-62572 | Msa1414640:CDS | 45.0% | |
| TCGTGTCAACACGGTACTCT+TGG | - | tig0024137:59976-59995 | None:intergenic | 50.0% | |
| !! | ATCTGATGCAAAAGCACCGC+TGG | + | tig0024137:60061-60080 | Msa1414640:intron | 50.0% |
| !! | TGCAAAAGCACCGCTGGTTT+CGG | + | tig0024137:60067-60086 | Msa1414640:intron | 50.0% |
| GTAAATGCCACCGAAACCAG+CGG | - | tig0024137:60080-60099 | None:intergenic | 50.0% | |
| TCCATCAAGCGCGATAAACG+AGG | - | tig0024137:60838-60857 | None:intergenic | 50.0% | |
| GAACACTGGTACACCTTCTC+AGG | + | tig0024137:61146-61165 | Msa1414640:CDS | 50.0% | |
| ! | AGGATACCGGTTATTGGGTG+TGG | + | tig0024137:61364-61383 | Msa1414640:CDS | 50.0% |
| CCGGTTATTGGGTGTGGAAA+TGG | + | tig0024137:61370-61389 | Msa1414640:CDS | 50.0% | |
| CTGAACTTCCTTGCAGCTCA+TGG | + | tig0024137:61513-61532 | Msa1414640:CDS | 50.0% | |
| CTTCCTTGCAGCTCATGGTT+TGG | + | tig0024137:61518-61537 | Msa1414640:CDS | 50.0% | |
| GTTCCAAACCATGAGCTGCA+AGG | - | tig0024137:61524-61543 | None:intergenic | 50.0% | |
| !! | CTCTATACACCGGTTCACCT+TGG | + | tig0024137:61616-61635 | Msa1414640:CDS | 50.0% |
| ACCCGAGATTCACTGCTTGA+AGG | - | tig0024137:61744-61763 | None:intergenic | 50.0% | |
| GAATCTCGGGTGCTCAATGA+TGG | + | tig0024137:61753-61772 | Msa1414640:CDS | 50.0% | |
| TAGCTTATCGGGTGTGCGAA+TGG | + | tig0024137:61838-61857 | Msa1414640:CDS | 50.0% | |
| AGCTTATCGGGTGTGCGAAT+GGG | + | tig0024137:61839-61858 | Msa1414640:CDS | 50.0% | |
| GAATTGTGGCACAGAAGAGG+AGG | + | tig0024137:61884-61903 | Msa1414640:CDS | 50.0% | |
| CACAGAAGAGGAGGTTGACA+AGG | + | tig0024137:61893-61912 | Msa1414640:CDS | 50.0% | |
| GGAGGTTGACAAGGAGAATG+TGG | + | tig0024137:61902-61921 | Msa1414640:CDS | 50.0% | |
| CAATTGGACCACGGCATAAC+CGG | - | tig0024137:62318-62337 | None:intergenic | 50.0% | |
| CCTAGGAACCAATTGGACCA+CGG | - | tig0024137:62327-62346 | None:intergenic | 50.0% | |
| !!! | GGCTTGAAGGATGCTGCTTT+TGG | + | tig0024137:62491-62510 | Msa1414640:CDS | 50.0% |
| !!! | AAGGATGCTGCTTTTGGGGT+GGG | + | tig0024137:62497-62516 | Msa1414640:CDS | 50.0% |
| CTGTATGCTGACAAGAGTGG+TGG | + | tig0024137:62536-62555 | Msa1414640:CDS | 50.0% | |
| !! | AAAAGCACCGCTGGTTTCGG+TGG | + | tig0024137:60070-60089 | Msa1414640:intron | 55.0% |
| !! | ACAGCTCTGGGAGCACCAAT+TGG | - | tig0024137:60385-60404 | None:intergenic | 55.0% |
| !! | GGAGGGCATTCTTTAGGTGC+TGG | + | tig0024137:60574-60593 | Msa1414640:CDS | 55.0% |
| GCCTCGTTTATCGCGCTTGA+TGG | + | tig0024137:60834-60853 | Msa1414640:CDS | 55.0% | |
| TGTTGGCGCTGTCGTGAAGA+TGG | + | tig0024137:61419-61438 | Msa1414640:CDS | 55.0% | |
| CTGCTCACGGCTTGCAACAA+TGG | + | tig0024137:61991-62010 | Msa1414640:CDS | 55.0% | |
| CTCACGGCTTGCAACAATGG+TGG | + | tig0024137:61994-62013 | Msa1414640:CDS | 55.0% | |
| !! | GAAGGCACCCAGCTCTTCAA+TGG | - | tig0024137:62275-62294 | None:intergenic | 55.0% |
| CGGTTATGCCGTGGTCCAAT+TGG | + | tig0024137:62316-62335 | Msa1414640:CDS | 55.0% | |
| ! | CCGTGGTCCAATTGGTTCCT+AGG | + | tig0024137:62324-62343 | Msa1414640:CDS | 55.0% |
| GTATTTCCAAGGCTCGTGGC+TGG | - | tig0024137:62377-62396 | None:intergenic | 55.0% | |
| !!! | GAAGGATGCTGCTTTTGGGG+TGG | + | tig0024137:62496-62515 | Msa1414640:CDS | 55.0% |
| AGCTGGGTGCCTTCACTGTC+AGG | + | tig0024137:62281-62300 | Msa1414640:CDS | 60.0% | |
| TGCCTTCACTGTCAGGCCTC+AGG | + | tig0024137:62288-62307 | Msa1414640:CDS | 60.0% | |
| GCCTTCACTGTCAGGCCTCA+GGG | + | tig0024137:62289-62308 | Msa1414640:CDS | 60.0% | |
| TCCCTGAGGCCTGACAGTGA+AGG | - | tig0024137:62293-62312 | None:intergenic | 60.0% | |
| CTGTCAGGCCTCAGGGATAC+CGG | + | tig0024137:62296-62315 | Msa1414640:CDS | 60.0% | |
| CGGCATAACCGGTATCCCTG+AGG | - | tig0024137:62307-62326 | None:intergenic | 60.0% | |
| ! | CAGGGATACCGGTTATGCCG+TGG | + | tig0024137:62307-62326 | Msa1414640:CDS | 60.0% |
| GCTCGTGGCTGGAGCAACAA+AGG | - | tig0024137:62366-62385 | None:intergenic | 60.0% | |
| GTTGCTCCAGCCACGAGCCT+TGG | + | tig0024137:62368-62387 | Msa1414640:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024137 | gene | 59007 | 62871 | 59007 | ID=Msa1414640;Name=Msa1414640 |
| tig0024137 | mRNA | 59007 | 62871 | 59007 | ID=Msa1414640-mRNA-1;Parent=Msa1414640;Name=Msa1414640-mRNA-1;_AED=0.17;_eAED=0.17;_QI=60|0|0.66|0.66|1|1|3|264|890 |
| tig0024137 | exon | 59007 | 59170 | 59007 | ID=Msa1414640-mRNA-1:exon:21892;Parent=Msa1414640-mRNA-1 |
| tig0024137 | exon | 59326 | 59433 | 59326 | ID=Msa1414640-mRNA-1:exon:21893;Parent=Msa1414640-mRNA-1 |
| tig0024137 | exon | 60147 | 62871 | 60147 | ID=Msa1414640-mRNA-1:exon:21894;Parent=Msa1414640-mRNA-1 |
| tig0024137 | five_prime_UTR | 59007 | 59066 | 59007 | ID=Msa1414640-mRNA-1:five_prime_utr;Parent=Msa1414640-mRNA-1 |
| tig0024137 | CDS | 59067 | 59170 | 59067 | ID=Msa1414640-mRNA-1:cds;Parent=Msa1414640-mRNA-1 |
| tig0024137 | CDS | 59326 | 59433 | 59326 | ID=Msa1414640-mRNA-1:cds;Parent=Msa1414640-mRNA-1 |
| tig0024137 | CDS | 60147 | 62607 | 60147 | ID=Msa1414640-mRNA-1:cds;Parent=Msa1414640-mRNA-1 |
| tig0024137 | three_prime_UTR | 62608 | 62871 | 62608 | ID=Msa1414640-mRNA-1:three_prime_utr;Parent=Msa1414640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
